Region found in RelA / SpoT proteins
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02260 AT4G02260 AT4G02260 AT4G02260 |
| fragaria_vesca | FvH4_2g26030 FvH4_2g26030 FvH4_3g31250 |
| malus_domestica | MD03G1291500.v1.1 MD11G1306700.v1.1 |
| prunus_persica | Prupe.8G264600_v2.0.a1 |
| pyrus_communis | pycom03g23090 pycom11g26840 |
| rosa_chinensis | RchiOBHm_Chr6g0294391 |
| rosa_laevigata | RLG00000011874 |
| rosa_multiflora | Rmu_co8168868.1_g000001 Rmu_sc0000276.1_g000002 Rmu_sc0024449.1_g000001 Rmu_sc0030396.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00298810 Rroxscaffold_7G00173410 |
| rosa_rugosa | Rorug04G0066700 Rorug04G0066800 Rorug04G0066900 Rorug04G0066900 Rorug04G0067000 Rorug04G0067100 Rorug06G0244100 Rorug06G0244200 |
| rosa_samantha | Rh4AG095600 Rh6AG356700 Rh6BG363400 Rh6CG370700 Rh6DG357400 Rh7BG000400 |
| rosa_wichuraiana | Rw4G020730 Rw6G017020 Rw6G031090 Rw7G015830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1875 |
| Acc36I | ACCTGC | 1 cut(s) | 883 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1238, 2391 |
| AccBSI | CCGCTC | 1 cut(s) | 11 |
| AccI | GTMKAC | 1 cut(s) | 2603 |
| AccII | CGCG | 3 cut(s) | 187, 1122, 2543 |
| AciI | CCGC | 4 cut(s) | 9, 1414, 2243, 2543 |
| AclWI | GGATC | 3 cut(s) | 405, 1455, 2150 |
| AcsI | RAATTY | 3 cut(s) | 1056, 1625, 1652 |
| AcuI | CTGAAG | 6 cut(s) | 246, 339, 999, 1134, 2061, 2172 |
| AcvI | CACGTG | 1 cut(s) | 881 |
| AfaI | GTAC | 6 cut(s) | 735, 838, 929, 968, 1519, 1839 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1238, 2391 |
| AflII | CTTAAG | 3 cut(s) | 401, 458, 1969 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1070, 1102 |
| Alw21I | GWGCWC | 6 cut(s) | 99, 149, 1164, 1259, 1646, 2067 |
| Alw26I | GTCTC | 2 cut(s) | 878, 1376 |
| Alw44I | GTGCAC | 1 cut(s) | 1255 |
| AlwI | GGATC | 3 cut(s) | 405, 1455, 2150 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1921 |
| Ama87I | CYCGRG | 1 cut(s) | 1647 |
| AoxI | GGCC | 4 cut(s) | 474, 1247, 2343, 2618 |
| ApaLI | GTGCAC | 1 cut(s) | 1255 |
| ApeKI | GCWGC | 5 cut(s) | 1799, 1921, 1982, 1994, 2613 |
| ApoI | RAATTY | 3 cut(s) | 1056, 1625, 1652 |
| AseI | ATTAAT | 2 cut(s) | 210, 1182 |
| AspLEI | GCGC | 5 cut(s) | 187, 498, 653, 663, 2543 |
| AspS9I | GGNCC | 3 cut(s) | 475, 1247, 1308 |
| AsuHPI | GGTGA | 3 cut(s) | 417, 2125, 2209 |
| AsuII | TTCGAA | 1 cut(s) | 627 |
| AvaI | CYCGRG | 1 cut(s) | 1647 |
| AvaII | GGWCC | 1 cut(s) | 1308 |
| BaeGI | GKGCMC | 2 cut(s) | 1259, 2382 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 600, 633 |
| BanII | GRGCYC | 3 cut(s) | 510, 1646, 2067 |
| BbrPI | CACGTG | 1 cut(s) | 881 |
| BbsI | GAAGAC | 3 cut(s) | 289, 345, 1556 |
| Bbv12I | GWGCWC | 6 cut(s) | 99, 149, 1164, 1259, 1646, 2067 |
| BbvCI | CCTCAGC | 1 cut(s) | 2433 |
| BbvI | GCAGC | 5 cut(s) | 1811, 1908, 1969, 1981, 2625 |
| BccI | CCATC | 7 cut(s) | 318, 476, 1240, 1438, 2104, 2422, 2592 |
| BceAI | ACGGC | 2 cut(s) | 163, 776 |
| BciVI | GTATCC | 2 cut(s) | 601, 2078 |
| BcoDI | GTCTC | 2 cut(s) | 878, 1376 |
| BfaI | CTAG | 6 cut(s) | 773, 908, 1418, 1671, 2585, 2622 |
| BfmI | CTRYAG | 1 cut(s) | 332 |
| BfrI | CTTAAG | 3 cut(s) | 401, 458, 1969 |
| BfuAI | ACCTGC | 1 cut(s) | 883 |
| BfuI | GTATCC | 2 cut(s) | 601, 2078 |
| BglII | AGATCT | 2 cut(s) | 1269, 1675 |
| BisI | GCNGC | 6 cut(s) | 1415, 1800, 1922, 1983, 1995, 2614 |
| BlsI | GCNGC | 6 cut(s) | 1416, 1801, 1923, 1984, 1996, 2615 |
| Bme18I | GGWCC | 1 cut(s) | 1308 |
| BmeT110I | CYCGRG | 1 cut(s) | 1647 |
| BmgT120I | GGNCC | 3 cut(s) | 475, 1247, 1308 |
| BmiI | GGNNCC | 2 cut(s) | 1137, 1310 |
| BmrI | ACTGGG | 2 cut(s) | 141, 2319 |
| BmsI | GCATC | 3 cut(s) | 337, 349, 756 |
| BmuI | ACTGGG | 2 cut(s) | 141, 2319 |
| BpiI | GAAGAC | 3 cut(s) | 289, 345, 1556 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 136, 168 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1803, 2433 |
| Bpu14I | TTCGAA | 1 cut(s) | 627 |
| BpuEI | CTTGAG | 2 cut(s) | 575, 2551 |
| BsaAI | YACGTR | 3 cut(s) | 539, 881, 1837 |
| BsaJI | CCNNGG | 2 cut(s) | 1709, 2193 |
| BsaWI | WCCGGW | 2 cut(s) | 204, 1886 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1731, 1761, 2243, 2273 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1238, 2391 |
| Bse1I | ACTGG | 5 cut(s) | 136, 441, 524, 1507, 2325 |
| Bse3DI | GCAATG | 7 cut(s) | 573, 873, 887, 1467, 1575, 2028, 2132 |
| BseDI | CCNNGG | 2 cut(s) | 1709, 2193 |
| BseGI | GGATG | 5 cut(s) | 154, 520, 930, 1084, 2603 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1238, 2391 |
| BseMI | GCAATG | 7 cut(s) | 573, 873, 887, 1467, 1575, 2028, 2132 |
| BseMII | CTCAG | 6 cut(s) | 176, 1472, 1597, 2424, 2478, 2640 |
| BseNI | ACTGG | 5 cut(s) | 136, 441, 524, 1507, 2325 |
| BseRI | GAGGAG | 4 cut(s) | 150, 653, 656, 800 |
| BseSI | GKGCMC | 2 cut(s) | 1259, 2382 |
| BseXI | GCAGC | 5 cut(s) | 1811, 1908, 1969, 1981, 2625 |
| BseYI | CCCAGC | 2 cut(s) | 697, 2183 |
| BsgI | GTGCAG | 1 cut(s) | 1445 |
| Bsh1236I | CGCG | 3 cut(s) | 187, 1122, 2543 |
| BshFI | GGCC | 4 cut(s) | 476, 1249, 2345, 2620 |
| BsiHKAI | GWGCWC | 6 cut(s) | 99, 149, 1164, 1259, 1646, 2067 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1647 |
| BsiSI | CCGG | 2 cut(s) | 205, 1887 |
| BslFI | GGGAC | 1 cut(s) | 80 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1238, 2391 |
| BsmAI | GTCTC | 2 cut(s) | 878, 1376 |
| BsmFI | GGGAC | 1 cut(s) | 80 |
| BsmI | GAATGC | 2 cut(s) | 41, 2657 |
| BsnI | GGCC | 4 cut(s) | 476, 1249, 2345, 2620 |
| BsoBI | CYCGRG | 1 cut(s) | 1647 |
| Bsp119I | TTCGAA | 1 cut(s) | 627 |
| Bsp1286I | GDGCHC | 8 cut(s) | 99, 149, 510, 1164, 1259, 1646, 2067, 2382 |
| Bsp1407I | TGTACA | 2 cut(s) | 733, 966 |
| Bsp143I | GATC | 8 cut(s) | 397, 993, 1269, 1447, 1675, 2155, 2413, 2490 |
| BspACI | CCGC | 4 cut(s) | 9, 1414, 2243, 2543 |
| BspANI | GGCC | 4 cut(s) | 476, 1249, 2345, 2620 |
| BspCNI | CTCAG | 6 cut(s) | 175, 1471, 1596, 2425, 2479, 2639 |
| BspFNI | CGCG | 3 cut(s) | 187, 1122, 2543 |
| BspHI | TCATGA | 1 cut(s) | 1098 |
| BspLI | GGNNCC | 2 cut(s) | 1137, 1310 |
| BspMAI | CTGCAG | 1 cut(s) | 336 |
| BspMI | ACCTGC | 1 cut(s) | 883 |
| BspPI | GGATC | 3 cut(s) | 405, 1455, 2150 |
| BspQI | GCTCTTC | 1 cut(s) | 2055 |
| BspT104I | TTCGAA | 1 cut(s) | 627 |
| BspTI | CTTAAG | 3 cut(s) | 401, 458, 1969 |
| BsrBI | CCGCTC | 1 cut(s) | 11 |
| BsrDI | GCAATG | 7 cut(s) | 573, 873, 887, 1467, 1575, 2028, 2132 |
| BsrGI | TGTACA | 2 cut(s) | 733, 966 |
| BsrI | ACTGG | 5 cut(s) | 136, 441, 524, 1507, 2325 |
| BssECI | CCNNGG | 2 cut(s) | 1709, 2193 |
| BssMI | GATC | 8 cut(s) | 397, 993, 1269, 1447, 1675, 2155, 2413, 2490 |
| BssT1I | CCWWGG | 2 cut(s) | 1709, 2193 |
| Bst4CI | ACNGT | 9 cut(s) | 601, 658, 1105, 1145, 1384, 1555, 1747, 2130, 2451 |
| Bst6I | CTCTTC | 4 cut(s) | 997, 1434, 2040, 2055 |
| BstAFI | CTTAAG | 3 cut(s) | 401, 458, 1969 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1577, 1921 |
| BstAUI | TGTACA | 2 cut(s) | 733, 966 |
| BstBAI | YACGTR | 3 cut(s) | 539, 881, 1837 |
| BstBI | TTCGAA | 1 cut(s) | 627 |
| BstF5I | GGATG | 5 cut(s) | 154, 520, 930, 1084, 2603 |
| BstFNI | CGCG | 3 cut(s) | 187, 1122, 2543 |
| BstHHI | GCGC | 5 cut(s) | 187, 498, 653, 663, 2543 |
| BstKTI | GATC | 8 cut(s) | 400, 996, 1272, 1450, 1678, 2158, 2416, 2493 |
| BstMAI | GTCTC | 2 cut(s) | 878, 1376 |
| BstMBI | GATC | 8 cut(s) | 397, 993, 1269, 1447, 1675, 2155, 2413, 2490 |
| BstNSI | RCATGY | 5 cut(s) | 835, 853, 1411, 1931, 2565 |
| BstSFI | CTRYAG | 1 cut(s) | 332 |
| BstSLI | GKGCMC | 2 cut(s) | 1259, 2382 |
| BstUI | CGCG | 3 cut(s) | 187, 1122, 2543 |
| BstV1I | GCAGC | 5 cut(s) | 1811, 1908, 1969, 1981, 2625 |
| BstV2I | GAAGAC | 3 cut(s) | 289, 345, 1556 |
| BstX2I | RGATCY | 5 cut(s) | 397, 1269, 1447, 1675, 2155 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 436, 1286 |
| BstYI | RGATCY | 5 cut(s) | 397, 1269, 1447, 1675, 2155 |
| BsuI | GTATCC | 2 cut(s) | 601, 2078 |
| BsuRI | GGCC | 4 cut(s) | 476, 1249, 2345, 2620 |
| BtsCI | GGATG | 5 cut(s) | 154, 520, 930, 1084, 2603 |
| BtsI | GCAGTG | 3 cut(s) | 341, 505, 1922 |
| BtsIMutI | CAGTG | 7 cut(s) | 170, 341, 505, 1773, 1922, 2447, 2634 |
| BveI | ACCTGC | 1 cut(s) | 883 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1921 |
| CciI | TCATGA | 1 cut(s) | 1098 |
| CfoI | GCGC | 5 cut(s) | 187, 498, 653, 663, 2543 |
| Cfr13I | GGNCC | 3 cut(s) | 475, 1247, 1308 |
| Csp6I | GTAC | 6 cut(s) | 734, 837, 928, 967, 1518, 1838 |
| CviQI | GTAC | 6 cut(s) | 734, 837, 928, 967, 1518, 1838 |
| DpnI | GATC | 8 cut(s) | 399, 995, 1271, 1449, 1677, 2157, 2415, 2492 |
| DpnII | GATC | 8 cut(s) | 397, 993, 1269, 1447, 1675, 2155, 2413, 2490 |
| DraI | TTTAAA | 1 cut(s) | 292 |
| Eam1104I | CTCTTC | 4 cut(s) | 997, 1434, 2040, 2055 |
| EarI | CTCTTC | 4 cut(s) | 997, 1434, 2040, 2055 |
| EciI | GGCGGA | 1 cut(s) | 2258 |
| Ecl136II | GAGCTC | 2 cut(s) | 1644, 2065 |
| Eco130I | CCWWGG | 2 cut(s) | 1709, 2193 |
| Eco24I | GRGCYC | 3 cut(s) | 510, 1646, 2067 |
| Eco32I | GATATC | 1 cut(s) | 2645 |
| Eco47I | GGWCC | 1 cut(s) | 1308 |
| Eco53kI | GAGCTC | 2 cut(s) | 1644, 2065 |
| Eco57I | CTGAAG | 6 cut(s) | 246, 339, 999, 1134, 2061, 2172 |
| Eco72I | CACGTG | 1 cut(s) | 881 |
| Eco88I | CYCGRG | 1 cut(s) | 1647 |
| EcoICRI | GAGCTC | 2 cut(s) | 1644, 2065 |
| EcoRV | GATATC | 1 cut(s) | 2645 |
| EcoT14I | CCWWGG | 2 cut(s) | 1709, 2193 |
| EcoT38I | GRGCYC | 3 cut(s) | 510, 1646, 2067 |
| ErhI | CCWWGG | 2 cut(s) | 1709, 2193 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2303, 2335 |
| FaqI | GGGAC | 1 cut(s) | 80 |
| FblI | GTMKAC | 1 cut(s) | 2603 |
| Fnu4HI | GCNGC | 6 cut(s) | 1415, 1800, 1922, 1983, 1995, 2614 |
| FokI | GGATG | 5 cut(s) | 141, 507, 937, 1091, 2610 |
| FriOI | GRGCYC | 3 cut(s) | 510, 1646, 2067 |
| Fsp4HI | GCNGC | 6 cut(s) | 1415, 1800, 1922, 1983, 1995, 2614 |
| FspBI | CTAG | 6 cut(s) | 773, 908, 1418, 1671, 2585, 2622 |
| GlaI | GCGC | 5 cut(s) | 186, 497, 652, 662, 2542 |
| GluI | GCNGC | 6 cut(s) | 1415, 1800, 1922, 1983, 1995, 2614 |
| GsaI | CCCAGC | 2 cut(s) | 701, 2187 |
| HaeIII | GGCC | 4 cut(s) | 476, 1249, 2345, 2620 |
| HapII | CCGG | 2 cut(s) | 205, 1887 |
| HhaI | GCGC | 5 cut(s) | 187, 498, 653, 663, 2543 |
| Hin6I | GCGC | 5 cut(s) | 185, 496, 651, 661, 2541 |
| HinP1I | GCGC | 5 cut(s) | 185, 496, 651, 661, 2541 |
| HindIII | AAGCTT | 1 cut(s) | 258 |
| HinfI | GANTC | 6 cut(s) | 123, 569, 728, 1302, 1369, 2036 |
| HpaII | CCGG | 2 cut(s) | 205, 1887 |
| HphI | GGTGA | 3 cut(s) | 417, 2125, 2209 |
| Hpy166II | GTNNAC | 9 cut(s) | 43, 224, 448, 969, 1257, 1704, 2224, 2604, 2632 |
| Hpy8I | GTNNAC | 9 cut(s) | 43, 224, 448, 969, 1257, 1704, 2224, 2604, 2632 |
| HpyAV | CCTTC | 8 cut(s) | 24, 520, 668, 970, 2233, 2240, 2369, 2528 |
| HpyCH4III | ACNGT | 9 cut(s) | 601, 658, 1105, 1145, 1384, 1555, 1747, 2130, 2451 |
| HpyCH4IV | ACGT | 4 cut(s) | 45, 538, 880, 1836 |
| HpySE526I | ACGT | 4 cut(s) | 45, 538, 880, 1836 |
| HspAI | GCGC | 5 cut(s) | 185, 496, 651, 661, 2541 |
| Kzo9I | GATC | 8 cut(s) | 397, 993, 1269, 1447, 1675, 2155, 2413, 2490 |
| LguI | GCTCTTC | 1 cut(s) | 2055 |
| LmnI | GCTCC | 7 cut(s) | 16, 121, 907, 1212, 1739, 1975, 2070 |
| Lsp1109I | GCAGC | 5 cut(s) | 1811, 1908, 1969, 1981, 2625 |
| LweI | GCATC | 3 cut(s) | 337, 349, 756 |
| MaeI | CTAG | 6 cut(s) | 773, 908, 1418, 1671, 2585, 2622 |
| MaeII | ACGT | 4 cut(s) | 45, 538, 880, 1836 |
| MaeIII | GTNAC | 6 cut(s) | 230, 619, 1498, 2259, 2286, 2437 |
| MalI | GATC | 8 cut(s) | 399, 995, 1271, 1449, 1677, 2157, 2415, 2492 |
| MbiI | CCGCTC | 1 cut(s) | 11 |
| MboI | GATC | 8 cut(s) | 397, 993, 1269, 1447, 1675, 2155, 2413, 2490 |
| MflI | RGATCY | 5 cut(s) | 397, 1269, 1447, 1675, 2155 |
| MhlI | GDGCHC | 8 cut(s) | 99, 149, 510, 1164, 1259, 1646, 2067, 2382 |
| MlyI | GAGTC | 3 cut(s) | 132, 578, 1378 |
| MmeI | TCCRAC | 1 cut(s) | 540 |
| MseI | TTAA | 8 cut(s) | 210, 291, 306, 402, 459, 1182, 1563, 1970 |
| MslI | CAYNNNNRTG | 2 cut(s) | 106, 1482 |
| MspA1I | CMGCKG | 2 cut(s) | 2456, 2616 |
| MspCI | CTTAAG | 3 cut(s) | 401, 458, 1969 |
| MspI | CCGG | 2 cut(s) | 205, 1887 |
| Mva1269I | GAATGC | 2 cut(s) | 41, 2657 |
| MvnI | CGCG | 3 cut(s) | 187, 1122, 2543 |
| NdeII | GATC | 8 cut(s) | 397, 993, 1269, 1447, 1675, 2155, 2413, 2490 |
| NlaIV | GGNNCC | 2 cut(s) | 1137, 1310 |
| NmuCI | GTSAC | 1 cut(s) | 2259 |
| NspI | RCATGY | 5 cut(s) | 835, 853, 1411, 1931, 2565 |
| NspV | TTCGAA | 1 cut(s) | 627 |
| PaeI | GCATGC | 1 cut(s) | 2565 |
| PaeR7I | CTCGAG | 1 cut(s) | 1647 |
| PagI | TCATGA | 1 cut(s) | 1098 |
| PciSI | GCTCTTC | 1 cut(s) | 2055 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 176 |
| PctI | GAATGC | 2 cut(s) | 41, 2657 |
| PfeI | GAWTC | 3 cut(s) | 728, 1302, 2036 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1238, 2391 |
| PkrI | GCNGC | 6 cut(s) | 1416, 1801, 1923, 1984, 1996, 2615 |
| PleI | GAGTC | 3 cut(s) | 131, 577, 1377 |
| PmaCI | CACGTG | 1 cut(s) | 881 |
| PmlI | CACGTG | 1 cut(s) | 881 |
| PpsI | GAGTC | 3 cut(s) | 131, 577, 1377 |
| Ppu21I | YACGTR | 3 cut(s) | 539, 881, 1837 |
| PshBI | ATTAAT | 2 cut(s) | 210, 1182 |
| PsiI | TTATAA | 1 cut(s) | 1875 |
| Psp124BI | GAGCTC | 2 cut(s) | 1646, 2067 |
| PspCI | CACGTG | 1 cut(s) | 881 |
| PspFI | CCCAGC | 2 cut(s) | 697, 2183 |
| PspN4I | GGNNCC | 2 cut(s) | 1137, 1310 |
| PspPI | GGNCC | 3 cut(s) | 475, 1247, 1308 |
| PstI | CTGCAG | 1 cut(s) | 336 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1921 |
| PsuI | RGATCY | 5 cut(s) | 397, 1269, 1447, 1675, 2155 |
| PvuII | CAGCTG | 2 cut(s) | 2456, 2616 |
| RsaI | GTAC | 6 cut(s) | 735, 838, 929, 968, 1519, 1839 |
| RsaNI | GTAC | 6 cut(s) | 734, 837, 928, 967, 1518, 1838 |
| RseI | CAYNNNNRTG | 2 cut(s) | 106, 1482 |
| SacI | GAGCTC | 2 cut(s) | 1646, 2067 |
| SapI | GCTCTTC | 1 cut(s) | 2055 |
| SaqAI | TTAA | 8 cut(s) | 210, 291, 306, 402, 459, 1182, 1563, 1970 |
| SatI | GCNGC | 6 cut(s) | 1415, 1800, 1922, 1983, 1995, 2614 |
| Sau3AI | GATC | 8 cut(s) | 397, 993, 1269, 1447, 1675, 2155, 2413, 2490 |
| Sau96I | GGNCC | 3 cut(s) | 475, 1247, 1308 |
| SchI | GAGTC | 3 cut(s) | 132, 578, 1378 |
| SduI | GDGCHC | 8 cut(s) | 99, 149, 510, 1164, 1259, 1646, 2067, 2382 |
| SfaNI | GCATC | 3 cut(s) | 337, 349, 756 |
| SfcI | CTRYAG | 1 cut(s) | 332 |
| Sfr274I | CTCGAG | 1 cut(s) | 1647 |
| SfuI | TTCGAA | 1 cut(s) | 627 |
| SinI | GGWCC | 1 cut(s) | 1308 |
| SlaI | CTCGAG | 1 cut(s) | 1647 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 106, 1482 |
| SmlI | CTYRAG | 6 cut(s) | 401, 458, 554, 1647, 1969, 2566 |
| SmoI | CTYRAG | 6 cut(s) | 401, 458, 554, 1647, 1969, 2566 |
| SphI | GCATGC | 1 cut(s) | 2565 |
| SsiI | CCGC | 4 cut(s) | 9, 1414, 2243, 2543 |
| SspI | AATATT | 1 cut(s) | 2299 |
| SspMI | CTAG | 6 cut(s) | 773, 908, 1418, 1671, 2585, 2622 |
| SstI | GAGCTC | 2 cut(s) | 1646, 2067 |
| StyI | CCWWGG | 2 cut(s) | 1709, 2193 |
| TaaI | ACNGT | 9 cut(s) | 601, 658, 1105, 1145, 1384, 1555, 1747, 2130, 2451 |
| TaiI | ACGT | 4 cut(s) | 48, 541, 883, 1839 |
| TatI | WGTACW | 2 cut(s) | 733, 966 |
| TauI | GCSGC | 1 cut(s) | 1417 |
| TfiI | GAWTC | 3 cut(s) | 728, 1302, 2036 |
| Tru1I | TTAA | 8 cut(s) | 210, 291, 306, 402, 459, 1182, 1563, 1970 |
| Tru9I | TTAA | 8 cut(s) | 210, 291, 306, 402, 459, 1182, 1563, 1970 |
| TscAI | CASTG | 7 cut(s) | 170, 341, 505, 1780, 1922, 2454, 2634 |
| TseFI | GTSAC | 1 cut(s) | 2259 |
| TseI | GCWGC | 5 cut(s) | 1799, 1921, 1982, 1994, 2613 |
| Tsp45I | GTSAC | 1 cut(s) | 2259 |
| TspGWI | ACGGA | 1 cut(s) | 2398 |
| TspRI | CASTG | 7 cut(s) | 170, 341, 505, 1780, 1922, 2454, 2634 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1238, 2391 |
| Vha464I | CTTAAG | 3 cut(s) | 401, 458, 1969 |
| VneI | GTGCAC | 1 cut(s) | 1255 |
| VpaK11BI | GGWCC | 1 cut(s) | 1308 |
| VspI | ATTAAT | 2 cut(s) | 210, 1182 |
| XapI | RAATTY | 3 cut(s) | 1056, 1625, 1652 |
| XceI | RCATGY | 5 cut(s) | 835, 853, 1411, 1931, 2565 |
| XhoI | CTCGAG | 1 cut(s) | 1647 |
| XmiI | GTMKAC | 1 cut(s) | 2603 |
| XspI | CTAG | 6 cut(s) | 773, 908, 1418, 1671, 2585, 2622 |