Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0005518

Physical Location & Seq

Genomic Coordinates Forward (+)

22937904 .. 22942510

Gene Structure 4607 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g29620.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGAATAAGATGATATTGGCTATAATTGCAGTGACCCACGTATGGTGGTTGGCTAGTTGTGTTGGTGCAGACCCGCAGATCAATCTTTTGAACGAGGGTTGCAGCCAGTACAACGCAACAAGCTTGTCAGACTTCTATACCAATCTCAACGCCACTTTCTTGGACCTCAAGGCGCAACTACTGAACGGCAGCAAGCACTTTGCAACGGCACAACAGGCCAAGGGCTCCGACCCCGTCTACGCCATGACGCAGTGTAGGAACTACCTCTCCTCTGCAGACTGTCTATCTTGCTTTGCTGCCGCCGTCTCTCAAATCCGCAACTGCTCTGCCTCCAATGGCGCTCGCGTTGTCTACGACGGCTGCTTTCTCCGGTATGAGAGCAGTGCATTTTTTGACCAGACTACCCTTCCTGGTAATGTAGGGCTCTGTGGGAATCAAACTGGATCACCAGCTACAACCTTTACTGCAGCTGCAGAAGAACTGCTGATGGATCTACAAGTTGCTACGTCTAATATTAACGGTTTCTTCACAGCATCGAAGGTGGTAGTTAGTGGTAGTGCAAACACAACCATCTATGGTGTGGCACAATGTGCCGAGACAACTAGCCAAACTGGTTGCCTAGATTGTTTAAAGGTGGCATACACCAATGTACAGAGCTGCCTTCCTGATACAGATGGTAGGGCGGTTGATGCTGGTTGTTTCTTGAGGTACTCTGCTACTTCTTTCTTCCCAGATAACCAGACTACTAATATCACGCCTTTCTTGAAAAAGGGAGGTAATTCAACAAAGAAGGCTATCATCATTGGAGTAGTAGTTGGAGGTGTAGGTCTTATATTCCTCGTTGCCGGATTTCTTGTCTATAATAGACTTTCAAGGAAGCCAAAGACAATTCGCAGAGGAGACATATTGGGAGCAACCGAGTTGCAAGGTCCAGTGAATTATAAGTATAAGGATTTGAAGTCAGCAACAGGAAATTTTAGTGATGAAAATAAACTAGGAGAAGGAGGATTTGGGGATGTCTACAAGGCTACTCTAAACAATGGGAAAACAGTTGCAGTAAAGAAACTAGCAATACTTCAAACAGACAGGGCAATGACAAGTTTCGAAAATGAAGTCAAGCTTATAAGTAATGTGCATCACCGGAATCTAATTCGCCTTCTCGGATGTTGTAGCAAAGGACCAGAATTACTTCTGATATTTGAATACATGGCAAACAACAGTCTCGACAAATACTTATTTGGCCCGAAAAGAGGCTCTCTAAACTGGAAGCAACGGAATGATATAATCCTCGGTACAGCTAGGGGTCTAGCCTATCTACACGAAGAATTCCATGTGTGTATCATACATAGAGATATAAAACCCAGCAACATTCTTTTGGATGATGATTTTCAGCCAAGAATTGCAGATTTTGGATTGGCAAGGCTTTTACCCGAGGACCAAAGTCATCTTAGTACCCGATTTGCAGGAACATTAGGATACACAGCACCTGAATATGCAATCCATGGTCAATTGTCAGAAAAGGTGGATACCTATAGCTATGGAGTAGTAGTCCTAGAAATTGTAAGTGGACAGAAGGGCAGTGAAATCAAATCTGATGCCATGGGTGAATTTCTCCTCGAAAAGGCCTGGAAACTATATGAGAATGGCCAGCACTTGGAGTTGGTCGATGAAACATTGGATCCAGATGAATACAAAGCAGGAAATGTGAAAAAGATTGTTGAGATTGCTCTAATGTGCACTCAATCATCACCTGCTCTAAGGCCAACAATGTCTGAAGTCGTCGTTTTACTTAAAAGCACAAGCTCTTGGGAAAATAGGCCGCTTACTAGGCCTGTGTTTGTTGATTCTGACCATAAACGAGTAAGGGTGGACACATCAACTTCTACCGGTTCCTCATCATCCAATGCTACCACATCCATCTCTCAGTTTTCAGGTCGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

647

Amino Acids

70.35

Weight (kDa)

7.11

Isoelectric Point (pI)

30.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	34 - 127	2e-17	Salt stress response/antifungal
Stress-antifung	PF01657	143 - 239	2.7e-13	Salt stress response/antifungal
Pkinase	PF00069	327 - 442	1.1e-20	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	329 - 442	1.1e-22	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005518)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g27612 FvH4_1g27613 FvH4_2g29620 FvH4_2g29620 FvH4_2g29620 FvH4_2g29620
malus_domestica	MD09G1281900.v1.1
prunus_persica	Prupe.3G012100_v2.0.a1
pyrus_communis	pycom09g18970 pycom09g18990
rosa_chinensis	RchiOBHm_Chr3g0487811 RchiOBHm_Chr3g0487871 RchiOBHm_Chr3g0487881
rosa_laevigata	RLG00000022971 RLG00000028062
rosa_multiflora	Rmu_sc0004448.1_g000005 Rmu_sc0008363.1_g000023
rosa_roxburghii	Rroxscaffold_3G00220850 Rroxscaffold_3G00252340 Rroxscaffold_5G00352940 Rroxscaffold_6G00394450 Rroxscaffold_6G00394460
rosa_rugosa	Rorug03G0236900 Rorug03G0237000
rosa_samantha	Rh3AG284800 Rh3BG321600 Rh3CG320300 Rh3DG318800
rosa_wichuraiana	Rw3G025250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	942, 1124
AarI	CACCTGC	1 cut(s)	1759
Acc36I	ACCTGC	1 cut(s)	1759
AccB7I	CCANNNNNTGG	1 cut(s)	1654
AccI	GTMKAC	3 cut(s)	237, 351, 1020
AccII	CGCG	1 cut(s)	345
AciI	CCGC	5 cut(s)	74, 300, 316, 683, 1820
AclWI	GGATC	4 cut(s)	451, 498, 1673, 1686
AcoI	YGGCCR	1 cut(s)	1645
AcsI	RAATTY	3 cut(s)	973, 1325, 1607
AcuI	CTGAAG	1 cut(s)	1794
AdeI	CACNNNGTG	1 cut(s)	590
AfaI	GTAC	5 cut(s)	110, 651, 710, 1294, 1453
AfiI	CCNNNNNNNGG	4 cut(s)	42, 1250, 1621, 1654
AgeI	ACCGGT	1 cut(s)	1886
AgsI	TTSAA	7 cut(s)	91, 766, 783, 873, 958, 1079, 1202
AjnI	CCWGG	2 cut(s)	409, 1625
AjuI	GAANNNNNNNTTGG	2 cut(s)	993, 1025
AloI	GAACNNNNNNTCC	2 cut(s)	251, 283
AluBI	AGCT	8 cut(s)	123, 452, 470, 657, 1120, 1298, 1536, 1803
AluI	AGCT	8 cut(s)	123, 452, 470, 657, 1120, 1298, 1536, 1803
Alw21I	GWGCWC	1 cut(s)	1739
Alw26I	GTCTC	4 cut(s)	310, 590, 894, 1226
Alw44I	GTGCAC	1 cut(s)	1735
AlwI	GGATC	4 cut(s)	451, 498, 1673, 1686
AlwNI	CAGNNNCTG	1 cut(s)	1487
Ama87I	CYCGRG	1 cut(s)	1430
AoxI	GGCC	7 cut(s)	216, 1240, 1623, 1645, 1760, 1817, 1829
ApaLI	GTGCAC	1 cut(s)	1735
ApeKI	GCWGC	7 cut(s)	102, 189, 296, 360, 467, 470, 657
ApoI	RAATTY	3 cut(s)	973, 1325, 1607
ArsI	GACNNNNNNTTYG	2 cut(s)	1098, 1130
AsiGI	ACCGGT	1 cut(s)	1886
Asp700I	GAANNNNTTC	1 cut(s)	1188
AspLEI	GCGC	2 cut(s)	175, 341
AspS9I	GGNCC	5 cut(s)	163, 929, 1178, 1241, 1435
AsuHPI	GGTGA	4 cut(s)	438, 1130, 1616, 1740
AsuII	TTCGAA	1 cut(s)	1104
AvaI	CYCGRG	1 cut(s)	1430
AvaII	GGWCC	4 cut(s)	163, 929, 1178, 1435
BaeGI	GKGCMC	1 cut(s)	1739
BalI	TGGCCA	1 cut(s)	1647
BamHI	GGATCC	1 cut(s)	1678
BanII	GRGCYC	2 cut(s)	227, 426
Bbv12I	GWGCWC	1 cut(s)	1739
BbvI	GCAGC	7 cut(s)	114, 201, 283, 347, 457, 479, 644
BccI	CCATC	4 cut(s)	481, 578, 668, 1925
BceAI	ACGGC	4 cut(s)	202, 222, 287, 373
BciT130I	CCWGG	2 cut(s)	411, 1627
BciVI	GTATCC	2 cut(s)	1469, 1519
BcoDI	GTCTC	4 cut(s)	310, 590, 894, 1226
BfaI	CTAG	9 cut(s)	54, 603, 620, 995, 1067, 1299, 1307, 1553, 1827
BfmI	CTRYAG	4 cut(s)	273, 465, 471, 1531
BfoI	RGCGCY	1 cut(s)	342
BfuAI	ACCTGC	1 cut(s)	1759
BfuI	GTATCC	2 cut(s)	1469, 1519
BisI	GCNGC	9 cut(s)	103, 190, 297, 300, 361, 468, 471, 658, 1820
BlsI	GCNGC	9 cut(s)	104, 191, 298, 301, 362, 469, 472, 659, 1821
Bme1390I	CCNGG	2 cut(s)	411, 1627
Bme18I	GGWCC	4 cut(s)	163, 929, 1178, 1435
BmeT110I	CYCGRG	1 cut(s)	1430
BmgT120I	GGNCC	5 cut(s)	163, 929, 1178, 1241, 1435
BmiI	GGNNCC	3 cut(s)	226, 1680, 1891
BmrFI	CCNGG	2 cut(s)	411, 1627
BmsI	GCATC	4 cut(s)	542, 679, 1144, 1585
BoxI	GACNNNNGTC	1 cut(s)	1440
Bpu14I	TTCGAA	1 cut(s)	1104
BpuEI	CTTGAG	2 cut(s)	152, 724
BsaAI	YACGTR	1 cut(s)	40
BsaJI	CCNNGG	5 cut(s)	219, 1288, 1431, 1501, 1599
BsaWI	WCCGGW	3 cut(s)	369, 1140, 1886
BsaXI	ACNNNNNCTCC	6 cut(s)	251, 281, 798, 828, 1533, 1563
Bsc4I	CCNNNNNNNGG	4 cut(s)	42, 1250, 1621, 1654
Bse118I	RCCGGY	1 cut(s)	1886
Bse1I	ACTGG	5 cut(s)	106, 445, 616, 932, 1268
Bse3DI	GCAATG	1 cut(s)	1098
BseBI	CCWGG	2 cut(s)	411, 1627
BseDI	CCNNGG	5 cut(s)	219, 1288, 1431, 1501, 1599
BseGI	GGATG	5 cut(s)	1021, 1169, 1384, 1898, 1913
BseLI	CCNNNNNNNGG	4 cut(s)	42, 1250, 1621, 1654
BseMI	GCAATG	1 cut(s)	1098
BseMII	CTCAG	1 cut(s)	1937
BseNI	ACTGG	5 cut(s)	106, 445, 616, 932, 1268
BseRI	GAGGAG	3 cut(s)	259, 912, 1604
BseSI	GKGCMC	1 cut(s)	1739
BseXI	GCAGC	7 cut(s)	114, 201, 283, 347, 457, 479, 644
BseYI	CCCAGC	1 cut(s)	1361
BsgI	GTGCAG	1 cut(s)	87
Bsh1236I	CGCG	1 cut(s)	345
BshFI	GGCC	7 cut(s)	218, 1242, 1625, 1647, 1762, 1819, 1831
BshTI	ACCGGT	1 cut(s)	1886
BsiHKAI	GWGCWC	1 cut(s)	1739
BsiHKCI	CYCGRG	1 cut(s)	1430
BsiSI	CCGG	4 cut(s)	370, 846, 1141, 1887
BslI	CCNNNNNNNGG	4 cut(s)	42, 1250, 1621, 1654
BsmAI	GTCTC	4 cut(s)	310, 590, 894, 1226
BsmBI	CGTCTC	1 cut(s)	310
BsnI	GGCC	7 cut(s)	218, 1242, 1625, 1647, 1762, 1819, 1831
BsoBI	CYCGRG	1 cut(s)	1430
Bsp119I	TTCGAA	1 cut(s)	1104
Bsp1286I	GDGCHC	3 cut(s)	227, 426, 1739
Bsp1407I	TGTACA	1 cut(s)	649
Bsp143I	GATC	4 cut(s)	78, 443, 490, 1678
Bsp19I	CCATGG	2 cut(s)	1501, 1599
BspACI	CCGC	5 cut(s)	74, 300, 316, 683, 1820
BspANI	GGCC	7 cut(s)	218, 1242, 1625, 1647, 1762, 1819, 1831
BspCNI	CTCAG	1 cut(s)	1936
BspFNI	CGCG	1 cut(s)	345
BspLI	GGNNCC	3 cut(s)	226, 1680, 1891
BspMAI	CTGCAG	3 cut(s)	277, 469, 475
BspMI	ACCTGC	1 cut(s)	1759
BspPI	GGATC	4 cut(s)	451, 498, 1673, 1686
BspT104I	TTCGAA	1 cut(s)	1104
BsrDI	GCAATG	1 cut(s)	1098
BsrFI	RCCGGY	1 cut(s)	1886
BsrGI	TGTACA	1 cut(s)	649
BsrI	ACTGG	5 cut(s)	106, 445, 616, 932, 1268
BssAI	RCCGGY	1 cut(s)	1886
BssECI	CCNNGG	5 cut(s)	219, 1288, 1431, 1501, 1599
BssMI	GATC	4 cut(s)	78, 443, 490, 1678
BssT1I	CCWWGG	3 cut(s)	219, 1501, 1599
Bst2UI	CCWGG	2 cut(s)	411, 1627
Bst4CI	ACNGT	4 cut(s)	281, 521, 1051, 1220
BstAPI	GCANNNNNTGC	1 cut(s)	590
BstAUI	TGTACA	1 cut(s)	649
BstBAI	YACGTR	1 cut(s)	40
BstBI	TTCGAA	1 cut(s)	1104
BstC8I	GCNNGC	3 cut(s)	194, 343, 1649
BstDEI	CTNAG	3 cut(s)	1448, 1757, 1923
BstDSI	CCRYGG	2 cut(s)	1501, 1599
BstENI	CCTNNNNNAGG	1 cut(s)	1619
BstF5I	GGATG	5 cut(s)	1021, 1169, 1384, 1898, 1913
BstFNI	CGCG	1 cut(s)	345
BstH2I	RGCGCY	1 cut(s)	342
BstHHI	GCGC	2 cut(s)	175, 341
BstKTI	GATC	4 cut(s)	81, 446, 493, 1681
BstMAI	GTCTC	4 cut(s)	310, 590, 894, 1226
BstMBI	GATC	4 cut(s)	78, 443, 490, 1678
BstMWI	GCNNNNNNNGC	5 cut(s)	26, 215, 590, 689, 1828
BstNI	CCWGG	2 cut(s)	411, 1627
BstPAI	GACNNNNGTC	1 cut(s)	1440
BstSCI	CCNGG	2 cut(s)	409, 1625
BstSFI	CTRYAG	4 cut(s)	273, 465, 471, 1531
BstSLI	GKGCMC	1 cut(s)	1739
BstUI	CGCG	1 cut(s)	345
BstV1I	GCAGC	7 cut(s)	114, 201, 283, 347, 457, 479, 644
BstX2I	RGATCY	2 cut(s)	490, 1678
BstXI	CCANNNNNNTGG	1 cut(s)	160
BstYI	RGATCY	2 cut(s)	490, 1678
BsuI	GTATCC	2 cut(s)	1469, 1519
BsuRI	GGCC	7 cut(s)	218, 1242, 1625, 1647, 1762, 1819, 1831
BtgI	CCRYGG	2 cut(s)	1501, 1599
BtsCI	GGATG	5 cut(s)	1021, 1169, 1384, 1898, 1913
BtsI	GCAGTG	4 cut(s)	36, 257, 388, 1585
BtsIMutI	CAGTG	5 cut(s)	36, 257, 388, 939, 1585
BveI	ACCTGC	1 cut(s)	1759
Cac8I	GCNNGC	3 cut(s)	194, 343, 1649
CaiI	CAGNNNCTG	1 cut(s)	1487
CfoI	GCGC	2 cut(s)	175, 341
Cfr10I	RCCGGY	1 cut(s)	1886
Cfr13I	GGNCC	5 cut(s)	163, 929, 1178, 1241, 1435
CseI	GACGC	1 cut(s)	256
Csp6I	GTAC	5 cut(s)	109, 650, 709, 1293, 1452
CspAI	ACCGGT	1 cut(s)	1886
CviAII	CATG	5 cut(s)	244, 1207, 1331, 1502, 1600
CviQI	GTAC	5 cut(s)	109, 650, 709, 1293, 1452
DdeI	CTNAG	3 cut(s)	1448, 1757, 1923
DpnI	GATC	4 cut(s)	80, 445, 492, 1680
DpnII	GATC	4 cut(s)	78, 443, 490, 1678
DraI	TTTAAA	1 cut(s)	630
DraIII	CACNNNGTG	1 cut(s)	590
EaeI	YGGCCR	1 cut(s)	1645
Eco130I	CCWWGG	3 cut(s)	219, 1501, 1599
Eco147I	AGGCCT	2 cut(s)	1625, 1831
Eco24I	GRGCYC	2 cut(s)	227, 426
Eco47I	GGWCC	4 cut(s)	163, 929, 1178, 1435
Eco57I	CTGAAG	1 cut(s)	1794
Eco88I	CYCGRG	1 cut(s)	1430
EcoNI	CCTNNNNNAGG	1 cut(s)	1619
EcoRI	GAATTC	1 cut(s)	1325
EcoRII	CCWGG	2 cut(s)	409, 1625
EcoT14I	CCWWGG	3 cut(s)	219, 1501, 1599
EcoT38I	GRGCYC	2 cut(s)	227, 426
ErhI	CCWWGG	3 cut(s)	219, 1501, 1599
Esp3I	CGTCTC	1 cut(s)	310
FaeI	CATG	5 cut(s)	247, 1210, 1334, 1505, 1603
FalI	AAGNNNNNCTT	2 cut(s)	1104, 1136
FatI	CATG	5 cut(s)	243, 1206, 1330, 1501, 1599
FauI	CCCGC	1 cut(s)	81
FblI	GTMKAC	3 cut(s)	237, 351, 1020
Fnu4HI	GCNGC	9 cut(s)	103, 190, 297, 300, 361, 468, 471, 658, 1820
FokI	GGATG	5 cut(s)	1028, 1176, 1391, 1885, 1900
FriOI	GRGCYC	2 cut(s)	227, 426
Fsp4HI	GCNGC	9 cut(s)	103, 190, 297, 300, 361, 468, 471, 658, 1820
FspBI	CTAG	9 cut(s)	54, 603, 620, 995, 1067, 1299, 1307, 1553, 1827
GlaI	GCGC	2 cut(s)	174, 340
GluI	GCNGC	9 cut(s)	103, 190, 297, 300, 361, 468, 471, 658, 1820
GsaI	CCCAGC	1 cut(s)	1365
HaeII	RGCGCY	1 cut(s)	342
HaeIII	GGCC	7 cut(s)	218, 1242, 1625, 1647, 1762, 1819, 1831
HapII	CCGG	4 cut(s)	370, 846, 1141, 1887
HgaI	GACGC	1 cut(s)	256
HhaI	GCGC	2 cut(s)	175, 341
Hin1II	CATG	5 cut(s)	247, 1210, 1334, 1505, 1603
Hin6I	GCGC	2 cut(s)	173, 339
HinP1I	GCGC	2 cut(s)	173, 339
HindIII	AAGCTT	2 cut(s)	121, 1118
HinfI	GANTC	3 cut(s)	433, 1144, 1844
HpaII	CCGG	4 cut(s)	370, 846, 1141, 1887
HphI	GGTGA	4 cut(s)	438, 1130, 1616, 1740
Hpy166II	GTNNAC	6 cut(s)	238, 352, 1021, 1568, 1737, 1870
Hpy188I	TCNGA	8 cut(s)	130, 229, 1163, 1194, 1516, 1594, 1774, 1849
Hpy188III	TCNNGA	5 cut(s)	665, 703, 763, 1223, 1682
Hpy8I	GTNNAC	6 cut(s)	238, 352, 1021, 1568, 1737, 1870
Hpy99I	CGWCG	2 cut(s)	359, 1784
HpyAV	CCTTC	7 cut(s)	416, 532, 671, 784, 995, 1166, 1567
HpyCH4III	ACNGT	4 cut(s)	281, 521, 1051, 1220
HpyCH4IV	ACGT	2 cut(s)	39, 506
HpyF10VI	GCNNNNNNNGC	5 cut(s)	26, 215, 590, 689, 1828
HpyF3I	CTNAG	3 cut(s)	1448, 1757, 1923
HpySE526I	ACGT	2 cut(s)	39, 506
Hsp92II	CATG	5 cut(s)	247, 1210, 1334, 1505, 1603
HspAI	GCGC	2 cut(s)	173, 339
Kzo9I	GATC	4 cut(s)	78, 443, 490, 1678
LmnI	GCTCC	2 cut(s)	230, 911
Lsp1109I	GCAGC	7 cut(s)	114, 201, 283, 347, 457, 479, 644
LweI	GCATC	4 cut(s)	542, 679, 1144, 1585
MaeI	CTAG	9 cut(s)	54, 603, 620, 995, 1067, 1299, 1307, 1553, 1827
MaeII	ACGT	2 cut(s)	39, 506
MaeIII	GTNAC	1 cut(s)	31
MalI	GATC	4 cut(s)	80, 445, 492, 1680
MboI	GATC	4 cut(s)	78, 443, 490, 1678
MboII	GAAGA	4 cut(s)	488, 517, 718, 1334
MfeI	CAATTG	1 cut(s)	1508
MflI	RGATCY	2 cut(s)	490, 1678
MhlI	GDGCHC	3 cut(s)	227, 426, 1739
MlsI	TGGCCA	1 cut(s)	1647
MluNI	TGGCCA	1 cut(s)	1647
MmeI	TCCRAC	2 cut(s)	252, 796
Mox20I	TGGCCA	1 cut(s)	1647
MroXI	GAANNNNTTC	1 cut(s)	1188
MscI	TGGCCA	1 cut(s)	1647
MseI	TTAA	3 cut(s)	516, 629, 1791
Msp20I	TGGCCA	1 cut(s)	1647
MspA1I	CMGCKG	1 cut(s)	470
MspI	CCGG	4 cut(s)	370, 846, 1141, 1887
MspR9I	CCNGG	2 cut(s)	411, 1627
MunI	CAATTG	1 cut(s)	1508
MvaI	CCWGG	2 cut(s)	411, 1627
MvnI	CGCG	1 cut(s)	345
MwoI	GCNNNNNNNGC	5 cut(s)	26, 215, 590, 689, 1828
NcoI	CCATGG	2 cut(s)	1501, 1599
NdeII	GATC	4 cut(s)	78, 443, 490, 1678
NlaIII	CATG	5 cut(s)	247, 1210, 1334, 1505, 1603
NlaIV	GGNNCC	3 cut(s)	226, 1680, 1891
NmeAIII	GCCGAG	1 cut(s)	619
NmuCI	GTSAC	1 cut(s)	31
NspV	TTCGAA	1 cut(s)	1104
PaqCI	CACCTGC	1 cut(s)	1759
PceI	AGGCCT	2 cut(s)	1625, 1831
PdmI	GAANNNNTTC	1 cut(s)	1188
PfeI	GAWTC	3 cut(s)	433, 1144, 1844
PflFI	GACNNNGTC	1 cut(s)	233
PflMI	CCANNNNNTGG	1 cut(s)	1654
PinAI	ACCGGT	1 cut(s)	1886
PkrI	GCNGC	9 cut(s)	104, 191, 298, 301, 362, 469, 472, 659, 1821
Ppu21I	YACGTR	1 cut(s)	40
PshAI	GACNNNNGTC	1 cut(s)	1440
PsiI	TTATAA	2 cut(s)	942, 1124
Psp6I	CCWGG	2 cut(s)	409, 1625
PspFI	CCCAGC	1 cut(s)	1361
PspGI	CCWGG	2 cut(s)	409, 1625
PspN4I	GGNNCC	3 cut(s)	226, 1680, 1891
PspPI	GGNCC	5 cut(s)	163, 929, 1178, 1241, 1435
PstI	CTGCAG	3 cut(s)	277, 469, 475
PstNI	CAGNNNCTG	1 cut(s)	1487
PsuI	RGATCY	2 cut(s)	490, 1678
PsyI	GACNNNGTC	1 cut(s)	233
PvuII	CAGCTG	1 cut(s)	470
RsaI	GTAC	5 cut(s)	110, 651, 710, 1294, 1453
RsaNI	GTAC	5 cut(s)	109, 650, 709, 1293, 1452
SaqAI	TTAA	3 cut(s)	516, 629, 1791
SatI	GCNGC	9 cut(s)	103, 190, 297, 300, 361, 468, 471, 658, 1820
Sau3AI	GATC	4 cut(s)	78, 443, 490, 1678
Sau96I	GGNCC	5 cut(s)	163, 929, 1178, 1241, 1435
ScrFI	CCNGG	2 cut(s)	411, 1627
SduI	GDGCHC	3 cut(s)	227, 426, 1739
SfaNI	GCATC	4 cut(s)	542, 679, 1144, 1585
SfcI	CTRYAG	4 cut(s)	273, 465, 471, 1531
SfuI	TTCGAA	1 cut(s)	1104
SinI	GGWCC	4 cut(s)	163, 929, 1178, 1435
SmlI	CTYRAG	2 cut(s)	167, 703
SmoI	CTYRAG	2 cut(s)	167, 703
SseBI	AGGCCT	2 cut(s)	1625, 1831
SsiI	CCGC	5 cut(s)	74, 300, 316, 683, 1820
SspI	AATATT	1 cut(s)	514
SspMI	CTAG	9 cut(s)	54, 603, 620, 995, 1067, 1299, 1307, 1553, 1827
StuI	AGGCCT	2 cut(s)	1625, 1831
StyD4I	CCNGG	2 cut(s)	409, 1625
StyI	CCWWGG	3 cut(s)	219, 1501, 1599
TaaI	ACNGT	4 cut(s)	281, 521, 1051, 1220
TaiI	ACGT	2 cut(s)	42, 509
TaqI	TCGA	5 cut(s)	536, 1104, 1224, 1617, 1665
TatI	WGTACW	2 cut(s)	108, 649
TauI	GCSGC	2 cut(s)	302, 1822
TfiI	GAWTC	3 cut(s)	433, 1144, 1844
Tru1I	TTAA	3 cut(s)	516, 629, 1791
Tru9I	TTAA	3 cut(s)	516, 629, 1791
TscAI	CASTG	5 cut(s)	36, 257, 388, 939, 1585
TseFI	GTSAC	1 cut(s)	31
TseI	GCWGC	7 cut(s)	102, 189, 296, 360, 467, 470, 657
Tsp45I	GTSAC	1 cut(s)	31
TspDTI	ATGAA	5 cut(s)	17, 999, 1125, 1683, 1701
TspGWI	ACGGA	1 cut(s)	1288
TspRI	CASTG	5 cut(s)	36, 257, 388, 939, 1585
Tth111I	GACNNNGTC	1 cut(s)	233
Van91I	CCANNNNNTGG	1 cut(s)	1654
VneI	GTGCAC	1 cut(s)	1735
VpaK11BI	GGWCC	4 cut(s)	163, 929, 1178, 1435
XagI	CCTNNNNNAGG	1 cut(s)	1619
XapI	RAATTY	3 cut(s)	973, 1325, 1607
XcmI	CCANNNNNNNNNTGG	1 cut(s)	577
XmiI	GTMKAC	3 cut(s)	237, 351, 1020
XmnI	GAANNNNTTC	1 cut(s)	1188
XspI	CTAG	9 cut(s)	54, 603, 620, 995, 1067, 1299, 1307, 1553, 1827

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.