Rmu_sc0004448.1_g000005

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004448.1
Physical Location & Seq
Forward (+)
22782 .. 28556
5775 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004448.1_g000005.1.cds

Sequence Viewer

Length: 1779 bp
atgaatgtaactgcattttggaagtttgatatcagttgtatgcttttgtgtaggtatgagagcagtggtttttttgaccagactgtagctacccttcctggtaatgtaggactctgtgggaatcaaactggatcgcctgctacaacctttactgcagctgctgaagaacttctaatggatcttcaagttgctacgcccaagattaatggcttctttgcagcatctaaggaggtagttagcggtagtggaaacacaacagtctatggtgtggcacaatgtgctgagacaactaccgtaactggttgccaagattgtttgaaggtggcatacaccaatgtacagagttgccttcccgatacagatggtagggcagttgatgccggttgtttcttgaggtactctgctacttctttcttcccagataaccagactactaatatcaagcctttcttagaaaaaggaggcaattcaagaaagaaggccatcatcattggagtagtggttggaggtgtaggtcttattttactcattgttggagttttgatctatttcagactttcaaggaagcccaagacggttcgtagaggagacatattgggagcaaccgatttgcaaggtccagtgaattataagtataaagatctgaagtcggcaacagcaaattttagtgatgcaaataagctaggagaaggaggattcggggacgtctacaaggcaactctaaacaatgggaaaacagttgcagtaaagaaactagctatactccaatcagacagggcaatgacaagtttcgaaaatgaagtcaagcttataagtaatgtacatcaccggaatctaattcgccttcttggatgttgtagcaaaggaccagaattacttctgatatatgaatacatggcaaacaacagtctggacaaattcttatttggtgagaaaagaggctttctaaactggaagcaaaggaatgatataatcgttggtacagctaggggcctagcctatctacatgaggaattccatgtatgtatcatacatagagatataaaaaccagcaacattctcttggatgatggttttcagccaagaattgcagattttgggttggcaaggcttttacctgaggatcaaactcatcttagtacccgatttgcaggaacattaggatacacagcacctgaatatgcaatccatggtcaattgtcagaaaaggtggatacctatagctatggagtagtagtccttgaaattgtaagcggccaaaagagcagtgaaatcaaatctgatactatgggtgaatttctcctagaaaaggcctggaaactctatgagaacggccagcacttggagttggtcgatgaaacattggatcccaacgattatgaagcagaagatgtgaaaaagatagttgagattgctctaatgtgcactcaatcatcacctgctctaaggccaacaatgtctgaaattgttgttttactcaaaagcacaggctcttgggtaaataggccgcttactaggcctgtgtttgttgattctgaccataaaagattgtcaggggagtcccttgacctgacttcttcctcaagcgttgtggatgaggagagcaccaacctcgccacaatggttcttctctatccttccgagaaaggactttcttccttacggataaggactttggttgtgatctcttcgcgtcaccgaatcgatactcaacgttgtaggctgagcagagcaatcactgggaagtttggagaaagcacgggttttgctaaagcgtga

Protein Analysis

592

Amino Acids

64.95

Weight (kDa)

7.11

Isoelectric Point (pI)

30.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 630, 812
AarI CACCTGC 1 cut(s) 1447
AatII GACGTC 1 cut(s) 708
Acc36I ACCTGC 1 cut(s) 1447
AccB7I CCANNNNNTGG 1 cut(s) 1342
AccI GTMKAC 1 cut(s) 708
AccII CGCG 1 cut(s) 1693
AciI CCGC 3 cut(s) 240, 1254, 1508
AclI AACGTT 1 cut(s) 1714
AclWI GGATC 5 cut(s) 139, 186, 1131, 1361, 1374
AcoI YGGCCR 2 cut(s) 1255, 1333
AcsI RAATTY 4 cut(s) 661, 917, 1013, 1295
AcuI CTGAAG 2 cut(s) 183, 665
AcyI GRCGYC 1 cut(s) 705
AdeI CACNNNGTG 1 cut(s) 278
AfaI GTAC 5 cut(s) 339, 398, 822, 982, 1141
AfiI CCNNNNNNNGG 2 cut(s) 1309, 1342
AgsI TTSAA 5 cut(s) 185, 319, 471, 561, 1244
AjnI CCWGG 2 cut(s) 97, 1313
AluBI AGCT 7 cut(s) 89, 158, 682, 758, 808, 986, 1224
AluI AGCT 7 cut(s) 89, 158, 682, 758, 808, 986, 1224
Alw21I GWGCWC 2 cut(s) 1427, 1607
Alw26I GTCTC 2 cut(s) 278, 582
Alw44I GTGCAC 1 cut(s) 1423
AlwI GGATC 5 cut(s) 139, 186, 1131, 1361, 1374
AlwNI CAGNNNCTG 2 cut(s) 161, 1175
AoxI GGCC 8 cut(s) 480, 991, 1255, 1311, 1333, 1448, 1505, 1517
ApaLI GTGCAC 1 cut(s) 1423
ApeKI GCWGC 3 cut(s) 155, 158, 218
ApoI RAATTY 4 cut(s) 661, 917, 1013, 1295
ArsI GACNNNNNNTTYG 2 cut(s) 786, 818
AseI ATTAAT 1 cut(s) 204
Asp700I GAANNNNTTC 2 cut(s) 168, 876
AspS9I GGNCC 3 cut(s) 617, 866, 991
AsuHPI GGTGA 5 cut(s) 818, 941, 1304, 1428, 1688
AsuII TTCGAA 1 cut(s) 792
AvaII GGWCC 2 cut(s) 617, 866
AxyI CCTNAGG 1 cut(s) 1119
BaeGI GKGCMC 1 cut(s) 1427
BamHI GGATCC 1 cut(s) 1366
BarI GAAGNNNNNNTAC 4 cut(s) 78, 110, 311, 343
Bbv12I GWGCWC 2 cut(s) 1427, 1607
BbvI GCAGC 3 cut(s) 145, 167, 230
BccI CCATC 3 cut(s) 356, 491, 1064
BceAI ACGGC 1 cut(s) 1348
BcgI CGANNNNNNTGC 2 cut(s) 1594, 1628
BciT130I CCWGG 2 cut(s) 99, 1315
BciVI GTATCC 2 cut(s) 1157, 1207
BcoDI GTCTC 2 cut(s) 278, 582
BfaI CTAG 6 cut(s) 683, 755, 987, 995, 1304, 1515
BfmI CTRYAG 3 cut(s) 84, 153, 1219
BfuAI ACCTGC 1 cut(s) 1447
BfuI GTATCC 2 cut(s) 1157, 1207
BglII AGATCT 1 cut(s) 640
BisI GCNGC 5 cut(s) 156, 159, 219, 1255, 1508
BlpI GCTNAGC 1 cut(s) 1724
BlsI GCNGC 5 cut(s) 157, 160, 220, 1256, 1509
Bme1390I CCNGG 2 cut(s) 99, 1315
Bme18I GGWCC 2 cut(s) 617, 866
BmgT120I GGNCC 3 cut(s) 617, 866, 991
BmiI GGNNCC 2 cut(s) 992, 1368
BmrFI CCNGG 2 cut(s) 99, 1315
BmrI ACTGGG 1 cut(s) 1749
BmsI GCATC 3 cut(s) 230, 367, 661
BmuI ACTGGG 1 cut(s) 1749
Bpu1102I GCTNAGC 1 cut(s) 1724
Bpu14I TTCGAA 1 cut(s) 792
BpuEI CTTGAG 2 cut(s) 412, 1567
Bsa29I ATCGAT 1 cut(s) 1704
BsaHI GRCGYC 1 cut(s) 705
BsaJI CCNNGG 1 cut(s) 1189
BsaWI WCCGGW 1 cut(s) 828
BsaXI ACNNNNNCTCC 4 cut(s) 486, 516, 1221, 1251
Bsc4I CCNNNNNNNGG 2 cut(s) 1309, 1342
Bse118I RCCGGY 1 cut(s) 380
Bse1I ACTGG 5 cut(s) 133, 304, 620, 956, 1744
Bse21I CCTNAGG 1 cut(s) 1119
Bse3DI GCAATG 1 cut(s) 786
BseBI CCWGG 2 cut(s) 99, 1315
BseCI ATCGAT 1 cut(s) 1704
BseDI CCNNGG 1 cut(s) 1189
BseGI GGATG 3 cut(s) 857, 1072, 1600
BseLI CCNNNNNNNGG 2 cut(s) 1309, 1342
BseMI GCAATG 1 cut(s) 786
BseMII CTCAG 3 cut(s) 273, 1110, 1715
BseNI ACTGG 5 cut(s) 133, 304, 620, 956, 1744
BseRI GAGGAG 2 cut(s) 600, 1613
BseSI GKGCMC 1 cut(s) 1427
BseXI GCAGC 3 cut(s) 145, 167, 230
Bsh1236I CGCG 1 cut(s) 1693
BshFI GGCC 8 cut(s) 482, 993, 1257, 1313, 1335, 1450, 1507, 1519
BshVI ATCGAT 1 cut(s) 1704
BsiHKAI GWGCWC 2 cut(s) 1427, 1607
BsiSI CCGG 2 cut(s) 381, 829
BslFI GGGAC 2 cut(s) 716, 1546
BslI CCNNNNNNNGG 2 cut(s) 1309, 1342
BsmAI GTCTC 2 cut(s) 278, 582
BsmFI GGGAC 2 cut(s) 716, 1546
BsnI GGCC 8 cut(s) 482, 993, 1257, 1313, 1335, 1450, 1507, 1519
Bsp119I TTCGAA 1 cut(s) 792
Bsp1286I GDGCHC 2 cut(s) 1427, 1607
Bsp1407I TGTACA 2 cut(s) 337, 820
Bsp143I GATC 7 cut(s) 131, 178, 543, 640, 1123, 1366, 1683
Bsp1720I GCTNAGC 1 cut(s) 1724
Bsp19I CCATGG 1 cut(s) 1189
BspACI CCGC 3 cut(s) 240, 1254, 1508
BspANI GGCC 8 cut(s) 482, 993, 1257, 1313, 1335, 1450, 1507, 1519
BspCNI CTCAG 3 cut(s) 274, 1111, 1716
BspDI ATCGAT 1 cut(s) 1704
BspFNI CGCG 1 cut(s) 1693
BspLI GGNNCC 2 cut(s) 992, 1368
BspMAI CTGCAG 1 cut(s) 157
BspMI ACCTGC 1 cut(s) 1447
BspPI GGATC 5 cut(s) 139, 186, 1131, 1361, 1374
BspT104I TTCGAA 1 cut(s) 792
BsrDI GCAATG 1 cut(s) 786
BsrFI RCCGGY 1 cut(s) 380
BsrGI TGTACA 2 cut(s) 337, 820
BsrI ACTGG 5 cut(s) 133, 304, 620, 956, 1744
BssAI RCCGGY 1 cut(s) 380
BssECI CCNNGG 1 cut(s) 1189
BssMI GATC 7 cut(s) 131, 178, 543, 640, 1123, 1366, 1683
BssNI GRCGYC 1 cut(s) 705
BssT1I CCWWGG 1 cut(s) 1189
Bst2UI CCWGG 2 cut(s) 99, 1315
Bst4CI ACNGT 6 cut(s) 85, 259, 295, 577, 739, 908
Bst6I CTCTTC 1 cut(s) 1693
BstACI GRCGYC 1 cut(s) 705
BstAPI GCANNNNNTGC 2 cut(s) 278, 377
BstAUI TGTACA 2 cut(s) 337, 820
BstBI TTCGAA 1 cut(s) 792
BstC8I GCNNGC 2 cut(s) 138, 1337
BstDEI CTNAG 7 cut(s) 225, 282, 451, 1119, 1136, 1445, 1724
BstDSI CCRYGG 1 cut(s) 1189
BstENI CCTNNNNNAGG 1 cut(s) 1307
BstF5I GGATG 3 cut(s) 857, 1072, 1600
BstFNI CGCG 1 cut(s) 1693
BstKTI GATC 7 cut(s) 134, 181, 546, 643, 1126, 1369, 1686
BstMAI GTCTC 2 cut(s) 278, 582
BstMBI GATC 7 cut(s) 131, 178, 543, 640, 1123, 1366, 1683
BstMWI GCNNNNNNNGC 4 cut(s) 278, 377, 1263, 1516
BstNI CCWGG 2 cut(s) 99, 1315
BstSCI CCNGG 2 cut(s) 97, 1313
BstSFI CTRYAG 3 cut(s) 84, 153, 1219
BstSLI GKGCMC 1 cut(s) 1427
BstUI CGCG 1 cut(s) 1693
BstV1I GCAGC 3 cut(s) 145, 167, 230
BstX2I RGATCY 3 cut(s) 178, 640, 1366
BstYI RGATCY 3 cut(s) 178, 640, 1366
Bsu15I ATCGAT 1 cut(s) 1704
Bsu36I CCTNAGG 1 cut(s) 1119
BsuI GTATCC 2 cut(s) 1157, 1207
BsuRI GGCC 8 cut(s) 482, 993, 1257, 1313, 1335, 1450, 1507, 1519
BsuTUI ATCGAT 1 cut(s) 1704
BtgI CCRYGG 1 cut(s) 1189
BtsCI GGATG 3 cut(s) 857, 1072, 1600
BtsI GCAGTG 2 cut(s) 70, 1273
BtsIMutI CAGTG 4 cut(s) 70, 627, 1273, 1737
BveI ACCTGC 1 cut(s) 1447
Cac8I GCNNGC 2 cut(s) 138, 1337
CaiI CAGNNNCTG 2 cut(s) 161, 1175
Cfr10I RCCGGY 1 cut(s) 380
Cfr13I GGNCC 3 cut(s) 617, 866, 991
ClaI ATCGAT 1 cut(s) 1704
CseI GACGC 1 cut(s) 1682
Csp6I GTAC 5 cut(s) 338, 397, 821, 981, 1140
CspCI CAANNNNNGTGG 2 cut(s) 1572, 1607
CviAII CATG 4 cut(s) 895, 1007, 1019, 1190
CviQI GTAC 5 cut(s) 338, 397, 821, 981, 1140
DdeI CTNAG 7 cut(s) 225, 282, 451, 1119, 1136, 1445, 1724
DpnI GATC 7 cut(s) 133, 180, 545, 642, 1125, 1368, 1685
DpnII GATC 7 cut(s) 131, 178, 543, 640, 1123, 1366, 1683
DraIII CACNNNGTG 1 cut(s) 278
EaeI YGGCCR 2 cut(s) 1255, 1333
Eam1104I CTCTTC 1 cut(s) 1693
EarI CTCTTC 1 cut(s) 1693
Eco130I CCWWGG 1 cut(s) 1189
Eco147I AGGCCT 2 cut(s) 1313, 1519
Eco32I GATATC 1 cut(s) 31
Eco47I GGWCC 2 cut(s) 617, 866
Eco57I CTGAAG 2 cut(s) 183, 665
Eco81I CCTNAGG 1 cut(s) 1119
EcoNI CCTNNNNNAGG 1 cut(s) 1307
EcoO109I RGGNCCY 1 cut(s) 991
EcoRI GAATTC 1 cut(s) 1013
EcoRII CCWGG 2 cut(s) 97, 1313
EcoRV GATATC 1 cut(s) 31
EcoT14I CCWWGG 1 cut(s) 1189
ErhI CCWWGG 1 cut(s) 1189
FaeI CATG 4 cut(s) 898, 1010, 1022, 1193
FalI AAGNNNNNCTT 4 cut(s) 434, 466, 792, 824
FaqI GGGAC 2 cut(s) 716, 1546
FatI CATG 4 cut(s) 894, 1006, 1018, 1189
FblI GTMKAC 1 cut(s) 708
Fnu4HI GCNGC 5 cut(s) 156, 159, 219, 1255, 1508
FokI GGATG 3 cut(s) 864, 1079, 1607
Fsp4HI GCNGC 5 cut(s) 156, 159, 219, 1255, 1508
FspBI CTAG 6 cut(s) 683, 755, 987, 995, 1304, 1515
GluI GCNGC 5 cut(s) 156, 159, 219, 1255, 1508
HaeIII GGCC 8 cut(s) 482, 993, 1257, 1313, 1335, 1450, 1507, 1519
HapII CCGG 2 cut(s) 381, 829
HgaI GACGC 1 cut(s) 1682
Hin1I GRCGYC 1 cut(s) 705
Hin1II CATG 4 cut(s) 898, 1010, 1022, 1193
HindIII AAGCTT 1 cut(s) 806
HinfI GANTC 7 cut(s) 111, 121, 696, 832, 1532, 1559, 1701
HpaII CCGG 2 cut(s) 381, 829
HphI GGTGA 5 cut(s) 818, 941, 1304, 1428, 1688
Hpy166II GTNNAC 2 cut(s) 709, 1425
Hpy188I TCNGA 9 cut(s) 554, 645, 772, 882, 1204, 1282, 1462, 1537, 1642
Hpy188III TCNNGA 4 cut(s) 353, 391, 471, 911
Hpy8I GTNNAC 2 cut(s) 709, 1425
HpyAV CCTTC 7 cut(s) 104, 313, 359, 472, 683, 854, 1647
HpyCH4III ACNGT 6 cut(s) 85, 259, 295, 577, 739, 908
HpyCH4IV ACGT 2 cut(s) 705, 1714
HpyF10VI GCNNNNNNNGC 4 cut(s) 278, 377, 1263, 1516
HpyF3I CTNAG 7 cut(s) 225, 282, 451, 1119, 1136, 1445, 1724
HpySE526I ACGT 2 cut(s) 705, 1714
Hsp92I GRCGYC 1 cut(s) 705
Hsp92II CATG 4 cut(s) 898, 1010, 1022, 1193
Kzo9I GATC 7 cut(s) 131, 178, 543, 640, 1123, 1366, 1683
LmnI GCTCC 1 cut(s) 599
Lsp1109I GCAGC 3 cut(s) 145, 167, 230
LweI GCATC 3 cut(s) 230, 367, 661
MaeI CTAG 6 cut(s) 683, 755, 987, 995, 1304, 1515
MaeII ACGT 2 cut(s) 705, 1714
MaeIII GTNAC 3 cut(s) 7, 295, 1694
MalI GATC 7 cut(s) 133, 180, 545, 642, 1125, 1368, 1685
MboI GATC 7 cut(s) 131, 178, 543, 640, 1123, 1366, 1683
MboII GAAGA 8 cut(s) 173, 176, 406, 1400, 1569, 1619, 1647, 1680
MfeI CAATTG 1 cut(s) 1196
MflI RGATCY 3 cut(s) 178, 640, 1366
MhlI GDGCHC 2 cut(s) 1427, 1607
MlyI GAGTC 2 cut(s) 105, 1568
MmeI TCCRAC 2 cut(s) 484, 514
MroXI GAANNNNTTC 2 cut(s) 168, 876
MseI TTAA 1 cut(s) 204
MspA1I CMGCKG 1 cut(s) 158
MspI CCGG 2 cut(s) 381, 829
MspR9I CCNGG 2 cut(s) 99, 1315
MunI CAATTG 1 cut(s) 1196
MvaI CCWGG 2 cut(s) 99, 1315
MvnI CGCG 1 cut(s) 1693
MwoI GCNNNNNNNGC 4 cut(s) 278, 377, 1263, 1516
NcoI CCATGG 1 cut(s) 1189
NdeII GATC 7 cut(s) 131, 178, 543, 640, 1123, 1366, 1683
NlaIII CATG 4 cut(s) 898, 1010, 1022, 1193
NlaIV GGNNCC 2 cut(s) 992, 1368
NmuCI GTSAC 1 cut(s) 1694
NspV TTCGAA 1 cut(s) 792
PaqCI CACCTGC 1 cut(s) 1447
PceI AGGCCT 2 cut(s) 1313, 1519
PdmI GAANNNNTTC 2 cut(s) 168, 876
PfeI GAWTC 5 cut(s) 121, 696, 832, 1532, 1701
PflMI CCANNNNNTGG 1 cut(s) 1342
PkrI GCNGC 5 cut(s) 157, 160, 220, 1256, 1509
PleI GAGTC 2 cut(s) 105, 1567
PpsI GAGTC 2 cut(s) 105, 1567
PshBI ATTAAT 1 cut(s) 204
PsiI TTATAA 2 cut(s) 630, 812
Psp1406I AACGTT 1 cut(s) 1714
Psp6I CCWGG 2 cut(s) 97, 1313
PspGI CCWGG 2 cut(s) 97, 1313
PspN4I GGNNCC 2 cut(s) 992, 1368
PspPI GGNCC 3 cut(s) 617, 866, 991
PstI CTGCAG 1 cut(s) 157
PstNI CAGNNNCTG 2 cut(s) 161, 1175
PsuI RGATCY 3 cut(s) 178, 640, 1366
PvuII CAGCTG 1 cut(s) 158
RsaI GTAC 5 cut(s) 339, 398, 822, 982, 1141
RsaNI GTAC 5 cut(s) 338, 397, 821, 981, 1140
SaqAI TTAA 1 cut(s) 204
SatI GCNGC 5 cut(s) 156, 159, 219, 1255, 1508
Sau3AI GATC 7 cut(s) 131, 178, 543, 640, 1123, 1366, 1683
Sau96I GGNCC 3 cut(s) 617, 866, 991
SchI GAGTC 2 cut(s) 105, 1568
ScrFI CCNGG 2 cut(s) 99, 1315
SduI GDGCHC 2 cut(s) 1427, 1607
SfaNI GCATC 3 cut(s) 230, 367, 661
SfcI CTRYAG 3 cut(s) 84, 153, 1219
SfuI TTCGAA 1 cut(s) 792
SinI GGWCC 2 cut(s) 617, 866
SmlI CTYRAG 2 cut(s) 391, 1582
SmoI CTYRAG 2 cut(s) 391, 1582
SseBI AGGCCT 2 cut(s) 1313, 1519
SsiI CCGC 3 cut(s) 240, 1254, 1508
SspMI CTAG 6 cut(s) 683, 755, 987, 995, 1304, 1515
StuI AGGCCT 2 cut(s) 1313, 1519
StyD4I CCNGG 2 cut(s) 97, 1313
StyI CCWWGG 1 cut(s) 1189
TaaI ACNGT 6 cut(s) 85, 259, 295, 577, 739, 908
TaiI ACGT 2 cut(s) 708, 1717
TaqI TCGA 3 cut(s) 792, 1353, 1704
TatI WGTACW 2 cut(s) 337, 820
TauI GCSGC 2 cut(s) 1257, 1510
TfiI GAWTC 5 cut(s) 121, 696, 832, 1532, 1701
Tru1I TTAA 1 cut(s) 204
Tru9I TTAA 1 cut(s) 204
TscAI CASTG 4 cut(s) 70, 627, 1273, 1744
TseFI GTSAC 1 cut(s) 1694
TseI GCWGC 3 cut(s) 155, 158, 218
Tsp45I GTSAC 1 cut(s) 1694
TspDTI ATGAA 5 cut(s) 17, 813, 903, 1371, 1395
TspGWI ACGGA 1 cut(s) 1678
TspRI CASTG 4 cut(s) 70, 627, 1273, 1744
Van91I CCANNNNNTGG 1 cut(s) 1342
VneI GTGCAC 1 cut(s) 1423
VpaK11BI GGWCC 2 cut(s) 617, 866
VspI ATTAAT 1 cut(s) 204
XagI CCTNNNNNAGG 1 cut(s) 1307
XapI RAATTY 4 cut(s) 661, 917, 1013, 1295
XmiI GTMKAC 1 cut(s) 708
XmnI GAANNNNTTC 2 cut(s) 168, 876
XspI CTAG 6 cut(s) 683, 755, 987, 995, 1304, 1515
ZraI GACGTC 1 cut(s) 706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.