Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0005518

Physical Location & Seq

Genomic Coordinates Forward (+)

33406194 .. 33411399

Gene Structure 5206 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG284800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGATGAATAAGAAGATATTGACAACACTGTCAATAATTACGATCAGCCAGATATGGTGGTGGGCTTGCGTGAGTGCAGACCCGCAGATCAATCTTCTGAACGAGGGTTGCAGCCAGTACAACGCAACCAGCCTGTCCAACTTCTATACCAATCTCAACGCCACTTTCTTGGACCTCAAAGCGCAACTACTCAACGGCAGCAAACACTTTGCAACGGCGCAACAGGCCAAGGGCTCCGACCCCGTCTACGCCATGACGCAGTGTAGGAATTACCTCTCCTCCGCCGACTGTCTATCTTGCTTTGCCGCCGCCGTCTCCCAAATCCGCAACTGCTCTGCCTCCAATGGCGCACGCGTCGTCTACGACGGCTGCTTCCTCCGGTATGAGAGCAGTGGTTTTTTTGACCAGACTGTAGCTACCCTTCCTGGTAATGTAGGACTCTGTGGGAATCAAACTGGATCGCCTGCTACAACCTTTACTGCAGCTGCTGAAGAACTTCTAATGGATCTTCAAGTTGCTACGCCCAAGATTAATGGCTTCTTTGCAGCATCTAAGGAGGTAGTTAGCGGTAGTGGAAACACAACAGTCTATGGTGTGGCACAATGTGCTGAGACAACTACCGTAACTGGTTGCCAAGATTGTTTGAAGGTGGCATACACCAATGTACAGAGTTGCCTTCCCGATACAGATGGTAGGGCAGTTGATGCCGGTTGTTTCTTGAGGTACTCTGCTACTTCTTTCTTCCCAGATAACCAGACTACTAATATCAAGCCTTTCTTAGAAAAAGGAGGCAATTCAAGAAAGAAGGCCATCATCATTGGGGTAGTGGTTGGAGGTGTAGGTCTTATTTTACTCGTTGGAGTTTTGATCTATTTCAGACTTTCAAGGAAGCCCAAGACGGTTCGTAGAGGAGACATATTGGGAGCAACCGAGTTGCAAGGTCCAGTGAATTATAAGTATAAAGATCTGAAGTCGGCAACAGCAAATTTTAGTGATGCAAATAAGCTAGGAGAAGGAGGATTCGGGGACGTCTACAAGGCAACTCTAAACAATGGGAAAACAGTTGCAGTAAAGAAACTAGCTATACTCCAATCAGACAGGGCAATGACAAGTTTCGAAAATGAAGTCAAGCTTATAAGTAATGTACATCACCGGAATCTAATTCGCCTTCTTGGATGTTGTAGCAAAGGACCAGAATTACTTCTGATATATGAATACATGGCAAACAACAGTCTGGACAAATTCTTATTTGGTGAGAAAAGAGGCTTTCTAAACTGGAAGCAAAGGAATGATATAATCGTTGGTACAGCTAGGGGCCTAGCCTATCTACATGAGGAATTCCATGTATGTATCATACATAGAGATATAAAAACCAGCAACATTCTCTTGGATGATGGTTTTCAGCCAAGAATTGCAGATTTTGGGTTGGCAAGGCTTTTACCTGAGGATCAAACTCATCTTAGTACCCGATTTGCAGGAACATTAGGATACACAGCACCTGAATATGCAATCCATGGTCAATTGTCAGAAAAGGTGGATACCTATAGCTATGGAGTAGTAGTCCTTGAAATTGTAAGCGGCCAAAAGAGCAGTGAGATCAAATCTGATACTATGGGTGAATTTCTCCTCGAAAAGGCCTGGAAACTCTATGAGAATGGCAAGCACTTGGAGTTGGTCGATGAAACGTTGGATCCCAACGAGTTTGACGCAGAAGATGTGAAAAAGATAGTTGAGATTGCTCTAATGTGCACTCAATCATCACCTGCTCTAAGGCCAACAATGTCTGAAATTGTTGTTTTACTCAAAAGCACAGGCTTTTGGGTAAATAGGCCGCTTACTAGGCCTGTGTTTGTTGATTCTGGCCATAAAAGAGTACGGGTGGACACGTCAACTTCTACTGGTTCCTCATCATCCAATGCTACAGCATCCATCTCTCAACTTTCAGGTCGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

650

Amino Acids

70.95

Weight (kDa)

8.01

Isoelectric Point (pI)

28.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	37 - 130	3.4e-17	Salt stress response/antifungal
Stress-antifung	PF01657	148 - 244	3.5e-13	Salt stress response/antifungal
Pkinase	PF00069	331 - 598	2.3e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	334 - 599	7.8e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005518)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g27612 FvH4_1g27613 FvH4_2g29620 FvH4_2g29620 FvH4_2g29620 FvH4_2g29620
malus_domestica	MD09G1281900.v1.1
prunus_persica	Prupe.3G012100_v2.0.a1
pyrus_communis	pycom09g18970 pycom09g18990
rosa_chinensis	RchiOBHm_Chr3g0487811 RchiOBHm_Chr3g0487871 RchiOBHm_Chr3g0487881
rosa_laevigata	RLG00000022971 RLG00000028062
rosa_multiflora	Rmu_sc0004448.1_g000005 Rmu_sc0008363.1_g000023
rosa_roxburghii	Rroxscaffold_3G00220850 Rroxscaffold_3G00252340 Rroxscaffold_5G00352940 Rroxscaffold_6G00394450 Rroxscaffold_6G00394460
rosa_rugosa	Rorug03G0236900 Rorug03G0237000
rosa_samantha	Rh3AG284800 Rh3BG321600 Rh3CG320300 Rh3DG318800
rosa_wichuraiana	Rw3G025250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	954, 1136
AarI	CACCTGC	1 cut(s)	1771
AasI	GACNNNNNNGTC	1 cut(s)	28
AatII	GACGTC	1 cut(s)	1032
Acc36I	ACCTGC	1 cut(s)	1771
AccI	GTMKAC	3 cut(s)	246, 360, 1032
AccII	CGCG	1 cut(s)	354
AciI	CCGC	8 cut(s)	83, 282, 306, 309, 325, 567, 1578, 1832
AclI	AACGTT	1 cut(s)	1685
AclWI	GGATC	5 cut(s)	466, 513, 1455, 1685, 1698
AcoI	YGGCCR	2 cut(s)	1579, 1861
AcsI	RAATTY	4 cut(s)	985, 1241, 1337, 1619
AcuI	CTGAAG	2 cut(s)	510, 989
AcyI	GRCGYC	1 cut(s)	1029
AdeI	CACNNNGTG	1 cut(s)	605
AfaI	GTAC	7 cut(s)	119, 666, 725, 1146, 1306, 1465, 1875
AfiI	CCNNNNNNNGG	1 cut(s)	1633
AflIII	ACRYGT	2 cut(s)	352, 1884
AgsI	TTSAA	5 cut(s)	512, 646, 798, 885, 1568
AjiI	CACGTC	1 cut(s)	1887
AjnI	CCWGG	2 cut(s)	424, 1637
AluBI	AGCT	7 cut(s)	416, 485, 1006, 1082, 1132, 1310, 1548
AluI	AGCT	7 cut(s)	416, 485, 1006, 1082, 1132, 1310, 1548
Alw21I	GWGCWC	1 cut(s)	1751
Alw26I	GTCTC	3 cut(s)	319, 605, 906
Alw44I	GTGCAC	1 cut(s)	1747
AlwI	GGATC	5 cut(s)	466, 513, 1455, 1685, 1698
AlwNI	CAGNNNCTG	2 cut(s)	488, 1499
AoxI	GGCC	9 cut(s)	225, 807, 1315, 1579, 1635, 1772, 1829, 1841, 1861
ApaLI	GTGCAC	1 cut(s)	1747
ApeKI	GCWGC	6 cut(s)	111, 198, 369, 482, 485, 545
ApoI	RAATTY	4 cut(s)	985, 1241, 1337, 1619
ArsI	GACNNNNNNTTYG	2 cut(s)	1110, 1142
AseI	ATTAAT	1 cut(s)	531
Asp700I	GAANNNNTTC	2 cut(s)	495, 1200
AspLEI	GCGC	3 cut(s)	184, 220, 350
AspS9I	GGNCC	4 cut(s)	172, 941, 1190, 1315
AsuHPI	GGTGA	4 cut(s)	1142, 1265, 1628, 1752
AsuII	TTCGAA	1 cut(s)	1116
AvaII	GGWCC	3 cut(s)	172, 941, 1190
AxyI	CCTNAGG	1 cut(s)	1443
BaeGI	GKGCMC	1 cut(s)	1751
BalI	TGGCCA	1 cut(s)	1863
BamHI	GGATCC	1 cut(s)	1690
BanII	GRGCYC	1 cut(s)	236
BarI	GAAGNNNNNNTAC	4 cut(s)	405, 437, 638, 670
Bbv12I	GWGCWC	1 cut(s)	1751
BbvI	GCAGC	6 cut(s)	123, 210, 356, 472, 494, 557
BccI	CCATC	4 cut(s)	683, 818, 1388, 1937
BceAI	ACGGC	4 cut(s)	211, 231, 296, 382
BciT130I	CCWGG	2 cut(s)	426, 1639
BciVI	GTATCC	2 cut(s)	1481, 1531
BcoDI	GTCTC	3 cut(s)	319, 605, 906
BfaI	CTAG	5 cut(s)	1007, 1079, 1311, 1319, 1839
BfmI	CTRYAG	4 cut(s)	411, 480, 1543, 1920
BfuAI	ACCTGC	1 cut(s)	1771
BfuI	GTATCC	2 cut(s)	1481, 1531
BglII	AGATCT	1 cut(s)	964
Bme1390I	CCNGG	2 cut(s)	426, 1639
Bme18I	GGWCC	3 cut(s)	172, 941, 1190
BmgBI	CACGTC	1 cut(s)	1887
BmgT120I	GGNCC	4 cut(s)	172, 941, 1190, 1315
BmiI	GGNNCC	4 cut(s)	235, 1316, 1692, 1903
BmrFI	CCNGG	2 cut(s)	426, 1639
BmsI	GCATC	4 cut(s)	557, 694, 985, 1934
Bpu14I	TTCGAA	1 cut(s)	1116
BpuEI	CTTGAG	1 cut(s)	739
BsaHI	GRCGYC	1 cut(s)	1029
BsaJI	CCNNGG	2 cut(s)	228, 1513
BsaWI	WCCGGW	2 cut(s)	378, 1152
BsaXI	ACNNNNNCTCC	4 cut(s)	263, 293, 1545, 1575
Bsc4I	CCNNNNNNNGG	1 cut(s)	1633
Bse118I	RCCGGY	1 cut(s)	707
Bse1I	ACTGG	6 cut(s)	115, 460, 631, 944, 1280, 1903
Bse21I	CCTNAGG	1 cut(s)	1443
Bse3DI	GCAATG	1 cut(s)	1110
BseBI	CCWGG	2 cut(s)	426, 1639
BseDI	CCNNGG	2 cut(s)	228, 1513
BseGI	GGATG	4 cut(s)	1181, 1396, 1910, 1925
BseLI	CCNNNNNNNGG	1 cut(s)	1633
BseMI	GCAATG	1 cut(s)	1110
BseMII	CTCAG	2 cut(s)	600, 1434
BseNI	ACTGG	6 cut(s)	115, 460, 631, 944, 1280, 1903
BseRI	GAGGAG	3 cut(s)	268, 924, 1616
BseSI	GKGCMC	1 cut(s)	1751
BseXI	GCAGC	6 cut(s)	123, 210, 356, 472, 494, 557
BsgI	GTGCAG	1 cut(s)	96
Bsh1236I	CGCG	1 cut(s)	354
BshFI	GGCC	9 cut(s)	227, 809, 1317, 1581, 1637, 1774, 1831, 1843, 1863
BsiHKAI	GWGCWC	1 cut(s)	1751
BsiSI	CCGG	3 cut(s)	379, 708, 1153
BslFI	GGGAC	1 cut(s)	1040
BslI	CCNNNNNNNGG	1 cut(s)	1633
BsmAI	GTCTC	3 cut(s)	319, 605, 906
BsmBI	CGTCTC	1 cut(s)	319
BsmFI	GGGAC	1 cut(s)	1040
BsnI	GGCC	9 cut(s)	227, 809, 1317, 1581, 1637, 1774, 1831, 1843, 1863
Bsp119I	TTCGAA	1 cut(s)	1116
Bsp1286I	GDGCHC	2 cut(s)	236, 1751
Bsp1407I	TGTACA	2 cut(s)	664, 1144
Bsp143I	GATC	9 cut(s)	42, 87, 458, 505, 867, 964, 1447, 1596, 1690
Bsp19I	CCATGG	1 cut(s)	1513
BspACI	CCGC	8 cut(s)	83, 282, 306, 309, 325, 567, 1578, 1832
BspANI	GGCC	9 cut(s)	227, 809, 1317, 1581, 1637, 1774, 1831, 1843, 1863
BspCNI	CTCAG	2 cut(s)	601, 1435
BspFNI	CGCG	1 cut(s)	354
BspLI	GGNNCC	4 cut(s)	235, 1316, 1692, 1903
BspMAI	CTGCAG	1 cut(s)	484
BspMI	ACCTGC	1 cut(s)	1771
BspPI	GGATC	5 cut(s)	466, 513, 1455, 1685, 1698
BspT104I	TTCGAA	1 cut(s)	1116
BsrDI	GCAATG	1 cut(s)	1110
BsrFI	RCCGGY	1 cut(s)	707
BsrGI	TGTACA	2 cut(s)	664, 1144
BsrI	ACTGG	6 cut(s)	115, 460, 631, 944, 1280, 1903
BssAI	RCCGGY	1 cut(s)	707
BssECI	CCNNGG	2 cut(s)	228, 1513
BssMI	GATC	9 cut(s)	42, 87, 458, 505, 867, 964, 1447, 1596, 1690
BssNI	GRCGYC	1 cut(s)	1029
BssT1I	CCWWGG	2 cut(s)	228, 1513
Bst2UI	CCWGG	2 cut(s)	426, 1639
Bst4CI	ACNGT	8 cut(s)	30, 290, 412, 586, 622, 901, 1063, 1232
BstACI	GRCGYC	1 cut(s)	1029
BstAPI	GCANNNNNTGC	2 cut(s)	605, 704
BstAUI	TGTACA	2 cut(s)	664, 1144
BstBI	TTCGAA	1 cut(s)	1116
BstC8I	GCNNGC	4 cut(s)	67, 352, 465, 1661
BstDEI	CTNAG	6 cut(s)	552, 609, 778, 1443, 1460, 1769
BstDSI	CCRYGG	1 cut(s)	1513
BstENI	CCTNNNNNAGG	1 cut(s)	1631
BstF5I	GGATG	4 cut(s)	1181, 1396, 1910, 1925
BstFNI	CGCG	1 cut(s)	354
BstHHI	GCGC	3 cut(s)	184, 220, 350
BstKTI	GATC	9 cut(s)	45, 90, 461, 508, 870, 967, 1450, 1599, 1693
BstMAI	GTCTC	3 cut(s)	319, 605, 906
BstMBI	GATC	9 cut(s)	42, 87, 458, 505, 867, 964, 1447, 1596, 1690
BstMWI	GCNNNNNNNGC	5 cut(s)	224, 605, 704, 1587, 1840
BstNI	CCWGG	2 cut(s)	426, 1639
BstSCI	CCNGG	2 cut(s)	424, 1637
BstSFI	CTRYAG	4 cut(s)	411, 480, 1543, 1920
BstSLI	GKGCMC	1 cut(s)	1751
BstUI	CGCG	1 cut(s)	354
BstV1I	GCAGC	6 cut(s)	123, 210, 356, 472, 494, 557
BstX2I	RGATCY	3 cut(s)	505, 964, 1690
BstXI	CCANNNNNNTGG	1 cut(s)	169
BstYI	RGATCY	3 cut(s)	505, 964, 1690
Bsu36I	CCTNAGG	1 cut(s)	1443
BsuI	GTATCC	2 cut(s)	1481, 1531
BsuRI	GGCC	9 cut(s)	227, 809, 1317, 1581, 1637, 1774, 1831, 1843, 1863
BtgI	CCRYGG	1 cut(s)	1513
BtrI	CACGTC	1 cut(s)	1887
BtsCI	GGATG	4 cut(s)	1181, 1396, 1910, 1925
BtsI	GCAGTG	3 cut(s)	266, 397, 1597
BtsIMutI	CAGTG	5 cut(s)	26, 266, 397, 951, 1597
BveI	ACCTGC	1 cut(s)	1771
Cac8I	GCNNGC	4 cut(s)	67, 352, 465, 1661
CaiI	CAGNNNCTG	2 cut(s)	488, 1499
CfoI	GCGC	3 cut(s)	184, 220, 350
Cfr10I	RCCGGY	1 cut(s)	707
Cfr13I	GGNCC	4 cut(s)	172, 941, 1190, 1315
CseI	GACGC	3 cut(s)	265, 343, 1715
Csp6I	GTAC	7 cut(s)	118, 665, 724, 1145, 1305, 1464, 1874
CviAII	CATG	5 cut(s)	253, 1219, 1331, 1343, 1514
CviQI	GTAC	7 cut(s)	118, 665, 724, 1145, 1305, 1464, 1874
DdeI	CTNAG	6 cut(s)	552, 609, 778, 1443, 1460, 1769
DpnI	GATC	9 cut(s)	44, 89, 460, 507, 869, 966, 1449, 1598, 1692
DpnII	GATC	9 cut(s)	42, 87, 458, 505, 867, 964, 1447, 1596, 1690
DraIII	CACNNNGTG	1 cut(s)	605
DrdI	GACNNNNNNGTC	1 cut(s)	28
DseDI	GACNNNNNNGTC	1 cut(s)	28
EaeI	YGGCCR	2 cut(s)	1579, 1861
EciI	GGCGGA	1 cut(s)	271
Eco130I	CCWWGG	2 cut(s)	228, 1513
Eco147I	AGGCCT	2 cut(s)	1637, 1843
Eco24I	GRGCYC	1 cut(s)	236
Eco47I	GGWCC	3 cut(s)	172, 941, 1190
Eco57I	CTGAAG	2 cut(s)	510, 989
Eco81I	CCTNAGG	1 cut(s)	1443
EcoNI	CCTNNNNNAGG	1 cut(s)	1631
EcoO109I	RGGNCCY	1 cut(s)	1315
EcoRI	GAATTC	1 cut(s)	1337
EcoRII	CCWGG	2 cut(s)	424, 1637
EcoT14I	CCWWGG	2 cut(s)	228, 1513
EcoT38I	GRGCYC	1 cut(s)	236
ErhI	CCWWGG	2 cut(s)	228, 1513
Esp3I	CGTCTC	1 cut(s)	319
FaeI	CATG	5 cut(s)	256, 1222, 1334, 1346, 1517
FalI	AAGNNNNNCTT	4 cut(s)	761, 793, 1116, 1148
FaqI	GGGAC	1 cut(s)	1040
FatI	CATG	5 cut(s)	252, 1218, 1330, 1342, 1513
FauI	CCCGC	1 cut(s)	90
FblI	GTMKAC	3 cut(s)	246, 360, 1032
FokI	GGATG	4 cut(s)	1188, 1403, 1897, 1912
FriOI	GRGCYC	1 cut(s)	236
FspBI	CTAG	5 cut(s)	1007, 1079, 1311, 1319, 1839
GlaI	GCGC	3 cut(s)	183, 219, 349
HaeIII	GGCC	9 cut(s)	227, 809, 1317, 1581, 1637, 1774, 1831, 1843, 1863
HapII	CCGG	3 cut(s)	379, 708, 1153
HgaI	GACGC	3 cut(s)	265, 343, 1715
HhaI	GCGC	3 cut(s)	184, 220, 350
Hin1I	GRCGYC	1 cut(s)	1029
Hin1II	CATG	5 cut(s)	256, 1222, 1334, 1346, 1517
Hin6I	GCGC	3 cut(s)	182, 218, 348
HinP1I	GCGC	3 cut(s)	182, 218, 348
HincII	GTYRAC	1 cut(s)	1890
HindII	GTYRAC	1 cut(s)	1890
HindIII	AAGCTT	1 cut(s)	1130
HinfI	GANTC	5 cut(s)	438, 448, 1020, 1156, 1856
HpaII	CCGG	3 cut(s)	379, 708, 1153
HphI	GGTGA	4 cut(s)	1142, 1265, 1628, 1752
Hpy166II	GTNNAC	6 cut(s)	247, 361, 1033, 1749, 1882, 1890
Hpy188I	TCNGA	9 cut(s)	99, 238, 878, 969, 1096, 1206, 1528, 1606, 1786
Hpy188III	TCNNGA	4 cut(s)	680, 718, 798, 1235
Hpy8I	GTNNAC	6 cut(s)	247, 361, 1033, 1749, 1882, 1890
Hpy99I	CGWCG	2 cut(s)	359, 368
HpyAV	CCTTC	6 cut(s)	431, 640, 686, 799, 1007, 1178
HpyCH4III	ACNGT	8 cut(s)	30, 290, 412, 586, 622, 901, 1063, 1232
HpyCH4IV	ACGT	3 cut(s)	1029, 1685, 1886
HpyF10VI	GCNNNNNNNGC	5 cut(s)	224, 605, 704, 1587, 1840
HpyF3I	CTNAG	6 cut(s)	552, 609, 778, 1443, 1460, 1769
HpySE526I	ACGT	3 cut(s)	1029, 1685, 1886
Hsp92I	GRCGYC	1 cut(s)	1029
Hsp92II	CATG	5 cut(s)	256, 1222, 1334, 1346, 1517
HspAI	GCGC	3 cut(s)	182, 218, 348
Kzo9I	GATC	9 cut(s)	42, 87, 458, 505, 867, 964, 1447, 1596, 1690
LmnI	GCTCC	2 cut(s)	239, 923
Lsp1109I	GCAGC	6 cut(s)	123, 210, 356, 472, 494, 557
LweI	GCATC	4 cut(s)	557, 694, 985, 1934
MaeI	CTAG	5 cut(s)	1007, 1079, 1311, 1319, 1839
MaeII	ACGT	3 cut(s)	1029, 1685, 1886
MaeIII	GTNAC	1 cut(s)	622
MalI	GATC	9 cut(s)	44, 89, 460, 507, 869, 966, 1449, 1598, 1692
MboI	GATC	9 cut(s)	42, 87, 458, 505, 867, 964, 1447, 1596, 1690
MboII	GAAGA	6 cut(s)	25, 86, 500, 503, 733, 1724
MfeI	CAATTG	1 cut(s)	1520
MflI	RGATCY	3 cut(s)	505, 964, 1690
MhlI	GDGCHC	2 cut(s)	236, 1751
MlsI	TGGCCA	1 cut(s)	1863
MluI	ACGCGT	1 cut(s)	352
MluNI	TGGCCA	1 cut(s)	1863
MlyI	GAGTC	1 cut(s)	432
MmeI	TCCRAC	5 cut(s)	162, 261, 811, 838, 1668
Mox20I	TGGCCA	1 cut(s)	1863
MroXI	GAANNNNTTC	2 cut(s)	495, 1200
MscI	TGGCCA	1 cut(s)	1863
MseI	TTAA	1 cut(s)	531
Msp20I	TGGCCA	1 cut(s)	1863
MspA1I	CMGCKG	1 cut(s)	485
MspI	CCGG	3 cut(s)	379, 708, 1153
MspR9I	CCNGG	2 cut(s)	426, 1639
MunI	CAATTG	1 cut(s)	1520
MvaI	CCWGG	2 cut(s)	426, 1639
MvnI	CGCG	1 cut(s)	354
MwoI	GCNNNNNNNGC	5 cut(s)	224, 605, 704, 1587, 1840
NcoI	CCATGG	1 cut(s)	1513
NdeII	GATC	9 cut(s)	42, 87, 458, 505, 867, 964, 1447, 1596, 1690
NlaIII	CATG	5 cut(s)	256, 1222, 1334, 1346, 1517
NlaIV	GGNNCC	4 cut(s)	235, 1316, 1692, 1903
NspV	TTCGAA	1 cut(s)	1116
PaqCI	CACCTGC	1 cut(s)	1771
PceI	AGGCCT	2 cut(s)	1637, 1843
PdmI	GAANNNNTTC	2 cut(s)	495, 1200
PfeI	GAWTC	4 cut(s)	448, 1020, 1156, 1856
PflFI	GACNNNGTC	1 cut(s)	242
PleI	GAGTC	1 cut(s)	432
PpsI	GAGTC	1 cut(s)	432
PshBI	ATTAAT	1 cut(s)	531
PsiI	TTATAA	2 cut(s)	954, 1136
Psp1406I	AACGTT	1 cut(s)	1685
Psp6I	CCWGG	2 cut(s)	424, 1637
PspGI	CCWGG	2 cut(s)	424, 1637
PspN4I	GGNNCC	4 cut(s)	235, 1316, 1692, 1903
PspPI	GGNCC	4 cut(s)	172, 941, 1190, 1315
PstI	CTGCAG	1 cut(s)	484
PstNI	CAGNNNCTG	2 cut(s)	488, 1499
PsuI	RGATCY	3 cut(s)	505, 964, 1690
PsyI	GACNNNGTC	1 cut(s)	242
PvuII	CAGCTG	1 cut(s)	485
RsaI	GTAC	7 cut(s)	119, 666, 725, 1146, 1306, 1465, 1875
RsaNI	GTAC	7 cut(s)	118, 665, 724, 1145, 1305, 1464, 1874
SaqAI	TTAA	1 cut(s)	531
Sau3AI	GATC	9 cut(s)	42, 87, 458, 505, 867, 964, 1447, 1596, 1690
Sau96I	GGNCC	4 cut(s)	172, 941, 1190, 1315
SchI	GAGTC	1 cut(s)	432
ScrFI	CCNGG	2 cut(s)	426, 1639
SduI	GDGCHC	2 cut(s)	236, 1751
SfaNI	GCATC	4 cut(s)	557, 694, 985, 1934
SfcI	CTRYAG	4 cut(s)	411, 480, 1543, 1920
SfuI	TTCGAA	1 cut(s)	1116
SinI	GGWCC	3 cut(s)	172, 941, 1190
SmlI	CTYRAG	1 cut(s)	718
SmoI	CTYRAG	1 cut(s)	718
SseBI	AGGCCT	2 cut(s)	1637, 1843
SsiI	CCGC	8 cut(s)	83, 282, 306, 309, 325, 567, 1578, 1832
SspMI	CTAG	5 cut(s)	1007, 1079, 1311, 1319, 1839
StuI	AGGCCT	2 cut(s)	1637, 1843
StyD4I	CCNGG	2 cut(s)	424, 1637
StyI	CCWWGG	2 cut(s)	228, 1513
TaaI	ACNGT	8 cut(s)	30, 290, 412, 586, 622, 901, 1063, 1232
TaiI	ACGT	3 cut(s)	1032, 1688, 1889
TaqI	TCGA	3 cut(s)	1116, 1629, 1677
TatI	WGTACW	3 cut(s)	117, 664, 1144
TauI	GCSGC	4 cut(s)	308, 311, 1581, 1834
TfiI	GAWTC	4 cut(s)	448, 1020, 1156, 1856
Tru1I	TTAA	1 cut(s)	531
Tru9I	TTAA	1 cut(s)	531
TscAI	CASTG	5 cut(s)	33, 266, 397, 951, 1597
TseI	GCWGC	6 cut(s)	111, 198, 369, 482, 485, 545
TspDTI	ATGAA	4 cut(s)	20, 1137, 1227, 1695
TspRI	CASTG	5 cut(s)	33, 266, 397, 951, 1597
Tth111I	GACNNNGTC	1 cut(s)	242
VneI	GTGCAC	1 cut(s)	1747
VpaK11BI	GGWCC	3 cut(s)	172, 941, 1190
VspI	ATTAAT	1 cut(s)	531
XagI	CCTNNNNNAGG	1 cut(s)	1631
XapI	RAATTY	4 cut(s)	985, 1241, 1337, 1619
XmiI	GTMKAC	3 cut(s)	246, 360, 1032
XmnI	GAANNNNTTC	2 cut(s)	495, 1200
XspI	CTAG	5 cut(s)	1007, 1079, 1311, 1319, 1839
ZraI	GACGTC	1 cut(s)	1030

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.