FvH4_2g33110

repressing transcription factor binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0003679
Physical Location & Seq
Reverse (-)
24912543 .. 24914822
2280 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g33110.t1

Sequence Viewer

Length: 2022 bp
ATGCCGAAAAAAAGAACAGCGCTCAAGATTCCGGTGGCCGTGGAGCCCGAGATCTGCCCTGAGGCAGTGCGGGGGTGGACGGATGGCCTCGCCAAGTATAAGAAGAAATCTAAGATGGCGCGTGAGGCGGCCAGAAAACACTTGTCGGCCATGGGCTGGAAATTTTGGCGTGCACGGCAGAAGGGAGGTAACCCTGGCGATTTAAGGTACGAATCTCCGGCCGGAAAGAATTATTACTTGCTTAAAACGGCCTGCCAAGCCTGCGTGGACCCAGACCTCACCGGTGTCGAAAGCACCGGTTCAAATAGTAGTTCTGATCCTAATTCTCCTATGGAAGAGAAGCAAGAAACAATGCCAAGAAAGAGAGGCAGGCCAAAAAAGAGCGGAATAAAGATGAAAGTTGGTGTGGTATTGCCAAAGAAGAGAGGAAGGAAGAGGAAAATTGATGTAGTTACGCCGGAGGAGGTATATCAGAGCACTGAGATTGGCCCTGAGCCGGGAACGCCGGAGGAAGAACCTCAGATTATTGATTCATTGGCTTCTGATCCTGATTATATCATGGAAGAAGAAGATTGTAAGGAGTCAATGTGTTATACTGATTCTTCGCCCCAGAAGACGAAAAAGAGAGGAAGAAAGAGGAAGATAGATTTGGTAGCGCAGAAACCAGGGAAGGTTCTTGCACAGTTGAAGAGGCTTAGACTTGATGAAGAACATCCGAAGTTACAGATTCGGAGTCCGAGAACAATTCTTTCTTCTTTGATAGACAACAATTTTGTAATGCTACATGCGAAAGTGTACTACCGGGGGAGAAGAAGCGGTGACAGTCCGCTGGCGACGGGTCAAGTTACTCGTGAAGGGATTTTGTGTGATTGTTGTGCTAAGGTGTATGCTCTCACTGCTTTTGAAGCACATGCTGGTAGCACGAATCACAGGCCGGGTGCCAATATCATCCTCGAAGAAGATGGGAGGTCAATTTCGGATTGCCAGCAACAGTTGAAGAGTTTTAAGGATGAGAAGAAGGTGATTAAGAGTAGTAGTAAGTTTGACAAGATTGATGATTTATGCAGTTTGTGTCATAATGAAGGTGAGCTGATCCTGTGTGATAGATGTCCTTCTGCATTCCATACTAGTTGTTTGGGTTTGAGTGAAGTAACAGATGGCGAATGGTTCTGCCCGGCGTGTTCTTGTGGAATCTGTGGCAGTGGAAAACTTGAAGAAGGTAGTATTCCTGGTGAGATTAGGAAATGTGATCAGTGTGAGCATAAGTTCCATGTTGGGTGCTTGAGAAACAATGAAGTGGTTTGTGAACAGAATTGGTTTTGCAGTAGTAAATGTCAAAATATTATGTTTGGGCTTGAAGGGCTTTTGGGACAGCCAATATTGGTGGGTGACAACAATCTCACCTGGACACTATTGAAGTCTTCCTCCACTAATAGGATAGACTCCAGAGAAACTCAGAAAAAGCTCAGAGGGGCTCTTAATGTGTTGCATAAGTGTTTTGAGCCGTCTGTTGATCCATACACACAAAGGGACCTCGTTGAAGACATTGTGTTAAACAGAGAGTCGAACCTGAGGCGCTTGAATTTCCAAGGGTTTTACACTGTGCTTTTGGAGAGGAATAGGGAAGTGATTTGTGTGGCTACTGTGAGGATCTATGGGGAAGTGGCAGAAGTACCTCTTGTGGCCACTATGTTCCGATACCGGAGACTTGGGATGTGTCGAATTTTGATGAATGAGCTGGAAAAACAGCTCGCTAAGTTGGGAGTTGAGAGATTGGTTTTGCCTTCGTCTCCTGCTGCACTGGATACATGGACCAACACTTCGATTGGGTTTTCTGAGATGCCTGAAGCTGAAAAACCACAGTTCGTTAATTATTTTTTCCTGTACTTTACAGGCACTATCATGTGTCATAAATTTTTGAAGCAGAGGAGTGCTGCAACACAATCAACAATCCCAGTAGAAAACATGGAACTTGATGACTCTTCTGGTGGCATCTCTGTGATAACACAGGCAGAAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004407 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0008270 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0015630 GO:0016043 GO:0016462 GO:0016569 GO:0016570 GO:0016575 GO:0016581 GO:0016787 GO:0016810 GO:0016811 GO:0016817 GO:0016818 GO:0016887 GO:0017053 GO:0017111 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0042623 GO:0042826 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0070491 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090545 GO:0090568 GO:0097159 GO:0098732 GO:0140096 GO:0140097 GO:1901363 GO:1901564 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Acetyltransf_10 Agenet Jas PHD

Protein Analysis

674

Amino Acids

75.5

Weight (kDa)

8.62

Isoelectric Point (pI)

49.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7028 PF22970 12 - 90 2e-22 Domain of unknown function (DUF7028)
TDBD PF16135 280 - 332 2.5e-21 Tify domain binding domain
PHD-1st_NSD PF23011 351 - 394 5.1e-08 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger 1
PHD PF00628 355 - 394 2.2e-08 PHD-finger
PHD_2 PF13831 363 - 394 4.7e-06 PHD-finger
IDM1_C PF23209 500 - 638 2.6e-48 Increased DNA methylation 1, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 938
AccB7I CCANNNNNTGG 1 cut(s) 156
AccBSI CCGCTC 1 cut(s) 384
AccII CGCG 1 cut(s) 121
AciI CCGC 5 cut(s) 70, 128, 384, 816, 827
AclWI GGATC 5 cut(s) 311, 539, 1087, 1508, 1658
AcoI YGGCCR 5 cut(s) 36, 129, 147, 219, 1683
AcsI RAATTY 4 cut(s) 161, 1582, 1722, 1913
AcuI CTGAAG 1 cut(s) 1866
AfaI GTAC 4 cut(s) 209, 797, 1674, 1886
AfeI AGCGCT 1 cut(s) 21
AfiI CCNNNNNNNGG 4 cut(s) 156, 496, 497, 1434
AgeI ACCGGT 2 cut(s) 281, 296
AhlI ACTAGT 1 cut(s) 1127
AjnI CCWGG 4 cut(s) 193, 664, 1228, 1403
AjuI GAANNNNNNNTTGG 2 cut(s) 632, 664
AluBI AGCT 5 cut(s) 1090, 1465, 1738, 1750, 1850
AluI AGCT 5 cut(s) 1090, 1465, 1738, 1750, 1850
Alw21I GWGCWC 2 cut(s) 175, 479
Alw26I GTCTC 2 cut(s) 1699, 1794
Alw44I GTGCAC 1 cut(s) 171
AlwI GGATC 5 cut(s) 311, 539, 1087, 1508, 1658
Ama87I CYCGRG 1 cut(s) 47
Aor51HI AGCGCT 1 cut(s) 21
ApaLI GTGCAC 1 cut(s) 171
ApeKI GCWGC 2 cut(s) 1796, 1934
ApoI RAATTY 4 cut(s) 161, 1582, 1722, 1913
ArsI GACNNNNNNTTYG 4 cut(s) 755, 787, 1804, 1836
AsiGI ACCGGT 2 cut(s) 281, 296
AspLEI GCGC 4 cut(s) 22, 121, 658, 1578
AspS9I GGNCC 4 cut(s) 268, 488, 1531, 1812
AsuC2I CCSGG 4 cut(s) 498, 803, 936, 1175
AsuHPI GGTGA 7 cut(s) 271, 830, 1033, 1097, 1244, 1393, 1400
AvaI CYCGRG 1 cut(s) 47
AvaII GGWCC 3 cut(s) 268, 1531, 1812
AxyI CCTNAGG 2 cut(s) 60, 1571
BaeGI GKGCMC 1 cut(s) 175
BalI TGGCCA 1 cut(s) 1685
BanI GGYRCC 1 cut(s) 938
BanII GRGCYC 2 cut(s) 48, 1477
BauI CACGAG 1 cut(s) 849
BbsI GAAGAC 3 cut(s) 620, 1413, 1548
Bbv12I GWGCWC 2 cut(s) 175, 479
BbvI GCAGC 2 cut(s) 1783, 1921
BccI CCATC 4 cut(s) 77, 109, 956, 1151
BceAI ACGGC 4 cut(s) 23, 191, 264, 1489
BciT130I CCWGG 4 cut(s) 195, 666, 1230, 1405
BciVI GTATCC 1 cut(s) 1798
BclI TGATCA 1 cut(s) 1249
BcnI CCSGG 4 cut(s) 498, 803, 936, 1175
BcoDI GTCTC 2 cut(s) 1699, 1794
BcuI ACTAGT 1 cut(s) 1127
BfaI CTAG 1 cut(s) 1128
BfoI RGCGCY 2 cut(s) 23, 1579
BfuI GTATCC 1 cut(s) 1798
BglII AGATCT 1 cut(s) 51
BisI GCNGC 3 cut(s) 129, 1797, 1935
BlsI GCNGC 3 cut(s) 130, 1798, 1936
Bme1390I CCNGG 8 cut(s) 195, 498, 666, 803, 936, 1175, 1230, 1405
Bme18I GGWCC 3 cut(s) 268, 1531, 1812
BmeT110I CYCGRG 1 cut(s) 47
BmgT120I GGNCC 4 cut(s) 268, 488, 1531, 1812
BmiI GGNNCC 4 cut(s) 45, 270, 940, 1532
BmrFI CCNGG 8 cut(s) 195, 498, 666, 803, 936, 1175, 1230, 1405
BmrI ACTGGG 1 cut(s) 1949
BmsI GCATC 2 cut(s) 1830, 2001
BmuI ACTGGG 1 cut(s) 1949
BpiI GAAGAC 3 cut(s) 620, 1413, 1548
BpmI CTGGAG 1 cut(s) 1429
Bpu10I CCTNAGC 2 cut(s) 492, 879
BpuEI CTTGAG 2 cut(s) 8, 1303
BpuMI CCSGG 4 cut(s) 498, 803, 936, 1175
BsaJI CCNNGG 6 cut(s) 39, 150, 193, 665, 802, 1588
BsaWI WCCGGW 4 cut(s) 31, 281, 296, 1701
BsaXI ACNNNNNCTCC 2 cut(s) 572, 602
Bsc4I CCNNNNNNNGG 4 cut(s) 156, 496, 497, 1434
Bse118I RCCGGY 2 cut(s) 281, 296
Bse1I ACTGG 2 cut(s) 1806, 1955
Bse21I CCTNAGG 2 cut(s) 60, 1571
BseBI CCWGG 4 cut(s) 195, 666, 1230, 1405
BseDI CCNNGG 6 cut(s) 39, 150, 193, 665, 802, 1588
BseGI GGATG 5 cut(s) 88, 712, 948, 1015, 1719
BseLI CCNNNNNNNGG 4 cut(s) 156, 496, 497, 1434
BseMII CTCAG 8 cut(s) 51, 471, 483, 533, 1469, 1480, 1562, 1827
BseNI ACTGG 2 cut(s) 1806, 1955
BseRI GAGGAG 2 cut(s) 476, 1942
BseSI GKGCMC 1 cut(s) 175
BseX3I CGGCCG 1 cut(s) 219
BseXI GCAGC 2 cut(s) 1783, 1921
BsgI GTGCAG 1 cut(s) 1782
Bsh1236I CGCG 1 cut(s) 121
Bsh1285I CGRYCG 1 cut(s) 222
BshNI GGYRCC 1 cut(s) 938
BshTI ACCGGT 2 cut(s) 281, 296
BsiEI CGRYCG 1 cut(s) 222
BsiHKAI GWGCWC 2 cut(s) 175, 479
BsiHKCI CYCGRG 1 cut(s) 47
BslFI GGGAC 2 cut(s) 1383, 1544
BslI CCNNNNNNNGG 4 cut(s) 156, 496, 497, 1434
BsmAI GTCTC 2 cut(s) 1699, 1794
BsmBI CGTCTC 1 cut(s) 1794
BsmFI GGGAC 2 cut(s) 1383, 1544
BsmI GAATGC 1 cut(s) 1118
BsoBI CYCGRG 1 cut(s) 47
Bsp1286I GDGCHC 4 cut(s) 48, 175, 479, 1477
Bsp143I GATC 7 cut(s) 51, 316, 544, 1092, 1249, 1513, 1650
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 5 cut(s) 70, 128, 384, 816, 827
BspCNI CTCAG 8 cut(s) 52, 472, 484, 532, 1468, 1479, 1563, 1828
BspFNI CGCG 1 cut(s) 121
BspLI GGNNCC 4 cut(s) 45, 270, 940, 1532
BspPI GGATC 5 cut(s) 311, 539, 1087, 1508, 1658
BspT107I GGYRCC 1 cut(s) 938
BsrBI CCGCTC 1 cut(s) 384
BsrFI RCCGGY 2 cut(s) 281, 296
BsrI ACTGG 2 cut(s) 1806, 1955
BssAI RCCGGY 2 cut(s) 281, 296
BssECI CCNNGG 6 cut(s) 39, 150, 193, 665, 802, 1588
BssMI GATC 7 cut(s) 51, 316, 544, 1092, 1249, 1513, 1650
BssSI CACGAG 1 cut(s) 849
BssT1I CCWWGG 2 cut(s) 150, 1588
Bst2BI CACGAG 1 cut(s) 849
Bst2UI CCWGG 4 cut(s) 195, 666, 1230, 1405
Bst4CI ACNGT 6 cut(s) 684, 824, 993, 1603, 1645, 1863
Bst6I CTCTTC 6 cut(s) 330, 416, 428, 683, 992, 1987
BstC8I GCNNGC 7 cut(s) 171, 253, 262, 371, 831, 986, 1752
BstDSI CCRYGG 2 cut(s) 39, 150
BstEII GGTNACC 1 cut(s) 188
BstF5I GGATG 5 cut(s) 88, 712, 948, 1015, 1719
BstFNI CGCG 1 cut(s) 121
BstH2I RGCGCY 2 cut(s) 23, 1579
BstHHI GCGC 4 cut(s) 22, 121, 658, 1578
BstKTI GATC 7 cut(s) 54, 319, 547, 1095, 1252, 1516, 1653
BstMAI GTCTC 2 cut(s) 1699, 1794
BstMBI GATC 7 cut(s) 51, 316, 544, 1092, 1249, 1513, 1650
BstMCI CGRYCG 1 cut(s) 222
BstMWI GCNNNNNNNGC 8 cut(s) 125, 175, 257, 261, 502, 896, 905, 1360
BstNI CCWGG 4 cut(s) 195, 666, 1230, 1405
BstNSI RCATGY 2 cut(s) 788, 914
BstPI GGTNACC 1 cut(s) 188
BstSCI CCNGG 8 cut(s) 193, 496, 664, 801, 934, 1173, 1228, 1403
BstSLI GKGCMC 1 cut(s) 175
BstUI CGCG 1 cut(s) 121
BstV1I GCAGC 2 cut(s) 1783, 1921
BstV2I GAAGAC 3 cut(s) 620, 1413, 1548
BstX2I RGATCY 2 cut(s) 51, 1650
BstYI RGATCY 2 cut(s) 51, 1650
BstZI CGGCCG 1 cut(s) 219
Bsu36I CCTNAGG 2 cut(s) 60, 1571
BsuI GTATCC 1 cut(s) 1798
BtgI CCRYGG 2 cut(s) 39, 150
BtsCI GGATG 5 cut(s) 88, 712, 948, 1015, 1719
BtsI GCAGTG 3 cut(s) 72, 894, 1207
BtsIMutI CAGTG 7 cut(s) 72, 477, 894, 1207, 1259, 1599, 1799
Cac8I GCNNGC 7 cut(s) 171, 253, 262, 371, 831, 986, 1752
CfoI GCGC 4 cut(s) 22, 121, 658, 1578
Cfr10I RCCGGY 2 cut(s) 281, 296
Cfr13I GGNCC 4 cut(s) 268, 488, 1531, 1812
Csp6I GTAC 4 cut(s) 208, 796, 1673, 1885
CspAI ACCGGT 2 cut(s) 281, 296
CspCI CAANNNNNGTGG 2 cut(s) 1365, 1400
CviAII CATG 8 cut(s) 151, 559, 785, 911, 1271, 1809, 1903, 1966
CviQI GTAC 4 cut(s) 208, 796, 1673, 1885
DpnI GATC 7 cut(s) 53, 318, 546, 1094, 1251, 1515, 1652
DpnII GATC 7 cut(s) 51, 316, 544, 1092, 1249, 1513, 1650
EaeI YGGCCR 5 cut(s) 36, 129, 147, 219, 1683
EagI CGGCCG 1 cut(s) 219
Eam1104I CTCTTC 6 cut(s) 330, 416, 428, 683, 992, 1987
EarI CTCTTC 6 cut(s) 330, 416, 428, 683, 992, 1987
EclXI CGGCCG 1 cut(s) 219
Eco130I CCWWGG 2 cut(s) 150, 1588
Eco24I GRGCYC 2 cut(s) 48, 1477
Eco47I GGWCC 3 cut(s) 268, 1531, 1812
Eco47III AGCGCT 1 cut(s) 21
Eco52I CGGCCG 1 cut(s) 219
Eco57I CTGAAG 1 cut(s) 1866
Eco81I CCTNAGG 2 cut(s) 60, 1571
Eco88I CYCGRG 1 cut(s) 47
Eco91I GGTNACC 1 cut(s) 188
EcoO109I RGGNCCY 1 cut(s) 1531
EcoO65I GGTNACC 1 cut(s) 188
EcoRII CCWGG 4 cut(s) 193, 664, 1228, 1403
EcoT14I CCWWGG 2 cut(s) 150, 1588
EcoT38I GRGCYC 2 cut(s) 48, 1477
ErhI CCWWGG 2 cut(s) 150, 1588
Esp3I CGTCTC 1 cut(s) 1794
FaeI CATG 8 cut(s) 154, 562, 788, 914, 1274, 1812, 1906, 1969
FalI AAGNNNNNCTT 2 cut(s) 1662, 1694
FaqI GGGAC 2 cut(s) 1383, 1544
FatI CATG 8 cut(s) 150, 558, 784, 910, 1270, 1808, 1902, 1965
FauI CCCGC 1 cut(s) 63
FbaI TGATCA 1 cut(s) 1249
Fnu4HI GCNGC 3 cut(s) 129, 1797, 1935
FokI GGATG 5 cut(s) 95, 699, 935, 1022, 1726
FriOI GRGCYC 2 cut(s) 48, 1477
Fsp4HI GCNGC 3 cut(s) 129, 1797, 1935
FspBI CTAG 1 cut(s) 1128
GlaI GCGC 4 cut(s) 21, 120, 657, 1577
GluI GCNGC 3 cut(s) 129, 1797, 1935
GsuI CTGGAG 1 cut(s) 1429
HaeII RGCGCY 2 cut(s) 23, 1579
HhaI GCGC 4 cut(s) 22, 121, 658, 1578
Hin1II CATG 8 cut(s) 154, 562, 788, 914, 1274, 1812, 1906, 1969
Hin6I GCGC 4 cut(s) 20, 119, 656, 1576
HinP1I GCGC 4 cut(s) 20, 119, 656, 1576
HphI GGTGA 7 cut(s) 271, 830, 1033, 1097, 1244, 1393, 1400
Hpy166II GTNNAC 5 cut(s) 78, 173, 268, 796, 1307
Hpy188III TCNNGA 4 cut(s) 25, 548, 851, 1446
Hpy8I GTNNAC 5 cut(s) 78, 173, 268, 796, 1307
Hpy99I CGWCG 1 cut(s) 838
HpyCH4III ACNGT 6 cut(s) 684, 824, 993, 1603, 1645, 1863
HpyCH4V TGCA 8 cut(s) 173, 680, 1065, 1118, 1323, 1489, 1799, 1937
HpyF10VI GCNNNNNNNGC 8 cut(s) 125, 175, 257, 261, 502, 896, 905, 1360
Hsp92II CATG 8 cut(s) 154, 562, 788, 914, 1274, 1812, 1906, 1969
HspAI GCGC 4 cut(s) 20, 119, 656, 1576
Ksp22I TGATCA 1 cut(s) 1249
Kzo9I GATC 7 cut(s) 51, 316, 544, 1092, 1249, 1513, 1650
LmnI GCTCC 1 cut(s) 43
Lsp1109I GCAGC 2 cut(s) 1783, 1921
LweI GCATC 2 cut(s) 1830, 2001
MaeI CTAG 1 cut(s) 1128
MaeIII GTNAC 7 cut(s) 188, 451, 720, 818, 844, 1150, 1388
MalI GATC 7 cut(s) 53, 318, 546, 1094, 1251, 1515, 1652
MbiI CCGCTC 1 cut(s) 384
MboI GATC 7 cut(s) 51, 316, 544, 1092, 1249, 1513, 1650
MflI RGATCY 2 cut(s) 51, 1650
MhlI GDGCHC 4 cut(s) 48, 175, 479, 1477
MlsI TGGCCA 1 cut(s) 1685
MluNI TGGCCA 1 cut(s) 1685
MlyI GAGTC 5 cut(s) 590, 742, 1436, 1571, 1973
Mox20I TGGCCA 1 cut(s) 1685
MscI TGGCCA 1 cut(s) 1685
MseI TTAA 7 cut(s) 203, 243, 1005, 1026, 1479, 1553, 1869
MslI CAYNNNNRTG 2 cut(s) 1901, 1997
Msp20I TGGCCA 1 cut(s) 1685
MspA1I CMGCKG 1 cut(s) 829
MspR9I CCNGG 8 cut(s) 195, 498, 666, 803, 936, 1175, 1230, 1405
Mva1269I GAATGC 1 cut(s) 1118
MvaI CCWGG 4 cut(s) 195, 666, 1230, 1405
MvnI CGCG 1 cut(s) 121
MwoI GCNNNNNNNGC 8 cut(s) 125, 175, 257, 261, 502, 896, 905, 1360
NciI CCSGG 4 cut(s) 498, 803, 936, 1175
NcoI CCATGG 1 cut(s) 150
NdeII GATC 7 cut(s) 51, 316, 544, 1092, 1249, 1513, 1650
NlaIII CATG 8 cut(s) 154, 562, 788, 914, 1274, 1812, 1906, 1969
NlaIV GGNNCC 4 cut(s) 45, 270, 940, 1532
NmuCI GTSAC 2 cut(s) 818, 1388
NspI RCATGY 2 cut(s) 788, 914
PctI GAATGC 1 cut(s) 1118
PfeI GAWTC 7 cut(s) 28, 212, 530, 599, 727, 925, 1191
PflMI CCANNNNNTGG 1 cut(s) 156
PinAI ACCGGT 2 cut(s) 281, 296
PkrI GCNGC 3 cut(s) 130, 1798, 1936
PleI GAGTC 5 cut(s) 589, 741, 1436, 1570, 1973
PpsI GAGTC 5 cut(s) 589, 741, 1436, 1570, 1973
PpuMI RGGWCCY 1 cut(s) 1531
Psp5II RGGWCCY 1 cut(s) 1531
Psp6I CCWGG 4 cut(s) 193, 664, 1228, 1403
PspEI GGTNACC 1 cut(s) 188
PspGI CCWGG 4 cut(s) 193, 664, 1228, 1403
PspN4I GGNNCC 4 cut(s) 45, 270, 940, 1532
PspPI GGNCC 4 cut(s) 268, 488, 1531, 1812
PspPPI RGGWCCY 1 cut(s) 1531
PsuI RGATCY 2 cut(s) 51, 1650
RsaI GTAC 4 cut(s) 209, 797, 1674, 1886
RsaNI GTAC 4 cut(s) 208, 796, 1673, 1885
RseI CAYNNNNRTG 2 cut(s) 1901, 1997
SaqAI TTAA 7 cut(s) 203, 243, 1005, 1026, 1479, 1553, 1869
SatI GCNGC 3 cut(s) 129, 1797, 1935
Sau3AI GATC 7 cut(s) 51, 316, 544, 1092, 1249, 1513, 1650
Sau96I GGNCC 4 cut(s) 268, 488, 1531, 1812
SchI GAGTC 5 cut(s) 590, 742, 1436, 1571, 1973
ScrFI CCNGG 8 cut(s) 195, 498, 666, 803, 936, 1175, 1230, 1405
SduI GDGCHC 4 cut(s) 48, 175, 479, 1477
SfaNI GCATC 2 cut(s) 1830, 2001
SgrAI CRCCGGYG 1 cut(s) 281
SinI GGWCC 3 cut(s) 268, 1531, 1812
SmiMI CAYNNNNRTG 2 cut(s) 1901, 1997
SmlI CTYRAG 2 cut(s) 23, 1282
SmoI CTYRAG 2 cut(s) 23, 1282
SpeI ACTAGT 1 cut(s) 1127
SsiI CCGC 5 cut(s) 70, 128, 384, 816, 827
SspI AATATT 2 cut(s) 1342, 1380
SspMI CTAG 1 cut(s) 1128
StyD4I CCNGG 8 cut(s) 193, 496, 664, 801, 934, 1173, 1228, 1403
StyI CCWWGG 2 cut(s) 150, 1588
TaaI ACNGT 6 cut(s) 684, 824, 993, 1603, 1645, 1863
TaqI TCGA 5 cut(s) 288, 954, 1565, 1720, 1823
TatI WGTACW 2 cut(s) 795, 1884
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 7 cut(s) 28, 212, 530, 599, 727, 925, 1191
Tru1I TTAA 7 cut(s) 203, 243, 1005, 1026, 1479, 1553, 1869
Tru9I TTAA 7 cut(s) 203, 243, 1005, 1026, 1479, 1553, 1869
TscAI CASTG 7 cut(s) 72, 484, 901, 1207, 1259, 1606, 1806
TseFI GTSAC 2 cut(s) 818, 1388
TseI GCWGC 2 cut(s) 1796, 1934
Tsp45I GTSAC 2 cut(s) 818, 1388
TspDTI ATGAA 6 cut(s) 410, 522, 720, 1095, 1308, 1745
TspGWI ACGGA 1 cut(s) 95
TspRI CASTG 7 cut(s) 72, 484, 901, 1207, 1259, 1606, 1806
Van91I CCANNNNNTGG 1 cut(s) 156
VneI GTGCAC 1 cut(s) 171
VpaK11BI GGWCC 3 cut(s) 268, 1531, 1812
XapI RAATTY 4 cut(s) 161, 1582, 1722, 1913
XceI RCATGY 2 cut(s) 788, 914
XspI CTAG 1 cut(s) 1128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.