Rh6DG486600

Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
64851268 .. 64853189
1922 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG486600.1

Sequence Viewer

Length: 1584 bp
ATGAAGAAGAAGAAGAAGAACGACTCTGTTCCTCCCCCTCTCATTGTGAAACCCCGATTATGCCCCGAAGCGATTCTCGAATGGTCCAACACCACCACCGGCAAGATCAGCCGCTCCGATTTGACCGATAAGGCCAGAGCTCACCTCTCCGCATTGGGCTGGAAATTTTGGTACAAAAACAAGTCCAACAACAGGATGGAGTTGCGCTACGAATCTCCCACCGGAAAAGTCTTCTACTCTCTCCGAGCGGCCTGCAAGGCCTGCGTTGAAGAAGAAGGACTGTCCCAGATTGTTGAGCACACCACCCTAAAACCTAAGGACGCTCTGCCTGTTGTTGACGCCGGTGACTTGGCAGTAGTACTAGTACCTCCTCCTGAAAAGCCCAAGAGATCATCAAAGAGGAAGCTTGATGCAATAGGGGAGCCGGTTCGGAATCCGAAACCGAAAAGAGGCAAGGTTCTTGCGGATTTGAAGAGAGTTAGAGATGAAAAGGAGAGGAATAGGGATGTCAAGATGAGGTCAAGCGATGATGAGAACCATGATGAGTGCAGTGTGTGTTGCTATGGAGGGGAATTGGTTCTCTGTGATGGATGTCCCTCTGCTTTTCATGCTGGCTGCATTGGTTTGGGTGAGGTGGGAGATGGTGATTGGTTCTGCCCATCTTGCTGCTGTGGGTTTTGCAGCTTGGGAATATTGGAGGATGATGGTGTTGCCTCATGTGACCAATGCAGGCAGAGGTACCACATTGGGTGTGCAAGAAATTCAGGGGAGGCTAAATTGGGTGTGGATGGGAAATTGTTTTGCAGTAGGAGATGTGAAAATGTGTGTTTGGGGATCAACAAGATTTTGGGGAAGGCTATTGTGGTTGGTCCTGATAATCTTACTTGGACTTTGCTCAAGTCCTCCTCAACTTGTGATGTGGACAACTTGACCAGGAATTACAGACAGCACAAATTGGCTGTGGAGGTGATGCATGAGTGTTTTGAGCCGACTCAGGACCCCTACACGAGAAGTGATGTGGTTGATGATGTGATTTTTAATAGGCAGAAGAAGTTTCGAGGGTTTTATACTGCGGTTTTGGAGAGGAATGAGGAGGTGATTAGCGCAGCTACGGTGAGGGTTTACAGTGAGCTGGGGGAAGTGCCGCTAGTGGCGACTAAGTTTAAGCACCGGAGACTTGGGATGTGTCGGATTTTGATGAGTGAGCTTGAGAAACAGCTTGTGAAGTTGGGAATTGGGAAGCTGGTTTTGCCTTCTGCTAAAGATGCACTGGAGGCATGGACTAGTACCTCACTTGGCTTTTCGAAGATGACTGCTGACGAAACATTACCATTGTTGAAGTATAGATTCTGGAATTTCCAAGACACTACCATGTGTCACAAGGTATTGAAGAAACAGACGACTAGTGCTGAATCTGATGGGTCTGCTGGTGCCATTTATACAGTAACGCAAGTAGGGGACATCGATGCAAGTGAAGAGGCTTGCATTATGGATATTGATTATGATTATGATTTCATGTTGGAGGATGACTGTAAATTCTTGTCATGGTACAAATCTGGATCTAAAAAGATTGTGGCTCTCTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

527

Amino Acids

58.88

Weight (kDa)

8.16

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7028 PF22970 15 - 92 5.3e-27 Domain of unknown function (DUF7028)
PHD PF00628 183 - 222 3.2e-06 PHD-finger
IDM1_C PF23209 328 - 461 2.1e-40 Increased DNA methylation 1, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 738
AccB1I GGYRCC 2 cut(s) 738, 1430
AccBSI CCGCTC 2 cut(s) 114, 248
AciI CCGC 6 cut(s) 112, 150, 248, 464, 1073, 1145
AclWI GGATC 2 cut(s) 842, 1567
AcsI RAATTY 4 cut(s) 164, 760, 1354, 1535
AcyI GRCGYC 1 cut(s) 339
AfaI GTAC 6 cut(s) 173, 360, 366, 740, 1288, 1550
AfiI CCNNNNNNNGG 2 cut(s) 192, 449
AgsI TTSAA 4 cut(s) 269, 472, 1339, 1390
AhlI ACTAGT 3 cut(s) 361, 1283, 1403
AjnI CCWGG 1 cut(s) 932
AluBI AGCT 8 cut(s) 140, 406, 684, 1109, 1132, 1207, 1219, 1243
AluI AGCT 8 cut(s) 140, 406, 684, 1109, 1132, 1207, 1219, 1243
Alw21I GWGCWC 2 cut(s) 142, 300
Alw26I GTCTC 1 cut(s) 1168
AlwI GGATC 2 cut(s) 842, 1567
AoxI GGCC 3 cut(s) 132, 249, 258
ApeKI GCWGC 4 cut(s) 615, 666, 681, 1106
ApoI RAATTY 4 cut(s) 164, 760, 1354, 1535
Asp700I GAANNNNTTC 2 cut(s) 72, 576
Asp718I GGTACC 1 cut(s) 738
AspLEI GCGC 2 cut(s) 207, 1106
AspS9I GGNCC 3 cut(s) 84, 869, 997
AsuHPI GGTGA 7 cut(s) 134, 356, 641, 656, 979, 1108, 1126
AsuII TTCGAA 1 cut(s) 1304
AvaII GGWCC 3 cut(s) 84, 869, 997
AxyI CCTNAGG 1 cut(s) 315
BanI GGYRCC 2 cut(s) 738, 1430
BanII GRGCYC 1 cut(s) 142
BauI CACGAG 1 cut(s) 1006
BbsI GAAGAC 1 cut(s) 223
Bbv12I GWGCWC 2 cut(s) 142, 300
BbvI GCAGC 4 cut(s) 602, 653, 693, 1118
BccI CCATC 7 cut(s) 190, 581, 635, 667, 698, 782, 1412
BcgI CGANNNNNNTGC 2 cut(s) 234, 268
BciT130I CCWGG 1 cut(s) 934
BcoDI GTCTC 1 cut(s) 1168
BcuI ACTAGT 3 cut(s) 361, 1283, 1403
BfaI CTAG 4 cut(s) 362, 1148, 1284, 1404
BglI GCCNNNNNGGC 1 cut(s) 257
BisI GCNGC 7 cut(s) 112, 249, 616, 667, 682, 1107, 1145
BlsI GCNGC 7 cut(s) 113, 250, 617, 668, 683, 1108, 1146
BmcAI AGTACT 1 cut(s) 360
Bme1390I CCNGG 1 cut(s) 934
Bme18I GGWCC 3 cut(s) 84, 869, 997
BmgT120I GGNCC 3 cut(s) 84, 869, 997
BmiI GGNNCC 4 cut(s) 423, 740, 999, 1432
BmrFI CCNGG 1 cut(s) 934
BmsI GCATC 4 cut(s) 400, 960, 1255, 1456
BpiI GAAGAC 1 cut(s) 223
BplI GAGNNNNNCTC 2 cut(s) 129, 161
BpmI CTGGAG 1 cut(s) 1292
Bpu14I TTCGAA 1 cut(s) 1304
BpuEI CTTGAG 2 cut(s) 881, 1229
Bsa29I ATCGAT 1 cut(s) 1464
BsaHI GRCGYC 1 cut(s) 339
BsaWI WCCGGW 2 cut(s) 221, 1170
Bsc4I CCNNNNNNNGG 2 cut(s) 192, 449
Bse118I RCCGGY 3 cut(s) 98, 341, 424
Bse1I ACTGG 1 cut(s) 1275
Bse21I CCTNAGG 1 cut(s) 315
BseBI CCWGG 1 cut(s) 934
BseCI ATCGAT 1 cut(s) 1464
BseGI GGATG 7 cut(s) 201, 511, 596, 706, 793, 1188, 1531
BseLI CCNNNNNNNGG 2 cut(s) 192, 449
BseMII CTCAG 1 cut(s) 1007
BseNI ACTGG 1 cut(s) 1275
BseRI GAGGAG 3 cut(s) 360, 895, 1106
BseXI GCAGC 4 cut(s) 602, 653, 693, 1118
BseYI CCCAGC 1 cut(s) 1132
BsgI GTGCAG 1 cut(s) 568
BshFI GGCC 3 cut(s) 134, 251, 260
BshNI GGYRCC 2 cut(s) 738, 1430
BshVI ATCGAT 1 cut(s) 1464
BsiHKAI GWGCWC 2 cut(s) 142, 300
BsiSI CCGG 5 cut(s) 99, 222, 342, 425, 1171
BslFI GGGAC 3 cut(s) 268, 579, 1472
BslI CCNNNNNNNGG 2 cut(s) 192, 449
BsmAI GTCTC 1 cut(s) 1168
BsmFI GGGAC 3 cut(s) 268, 579, 1472
BsnI GGCC 3 cut(s) 134, 251, 260
Bsp119I TTCGAA 1 cut(s) 1304
Bsp1286I GDGCHC 2 cut(s) 142, 300
Bsp143I GATC 4 cut(s) 105, 389, 834, 1559
BspACI CCGC 6 cut(s) 112, 150, 248, 464, 1073, 1145
BspANI GGCC 3 cut(s) 134, 251, 260
BspCNI CTCAG 1 cut(s) 1006
BspDI ATCGAT 1 cut(s) 1464
BspLI GGNNCC 4 cut(s) 423, 740, 999, 1432
BspPI GGATC 2 cut(s) 842, 1567
BspT104I TTCGAA 1 cut(s) 1304
BspT107I GGYRCC 2 cut(s) 738, 1430
BsrBI CCGCTC 2 cut(s) 114, 248
BsrFI RCCGGY 3 cut(s) 98, 341, 424
BsrI ACTGG 1 cut(s) 1275
BssAI RCCGGY 3 cut(s) 98, 341, 424
BssMI GATC 4 cut(s) 105, 389, 834, 1559
BssNI GRCGYC 1 cut(s) 339
BssSI CACGAG 1 cut(s) 1006
Bst2BI CACGAG 1 cut(s) 1006
Bst2UI CCWGG 1 cut(s) 934
Bst4CI ACNGT 5 cut(s) 282, 1114, 1127, 1444, 1532
Bst6I CTCTTC 2 cut(s) 467, 1470
BstACI GRCGYC 1 cut(s) 339
BstAPI GCANNNNNTGC 1 cut(s) 261
BstBI TTCGAA 1 cut(s) 1304
BstC8I GCNNGC 5 cut(s) 253, 262, 613, 731, 1483
BstDEI CTNAG 3 cut(s) 315, 993, 1158
BstF5I GGATG 7 cut(s) 201, 511, 596, 706, 793, 1188, 1531
BstHHI GCGC 2 cut(s) 207, 1106
BstKTI GATC 4 cut(s) 108, 392, 837, 1562
BstMAI GTCTC 1 cut(s) 1168
BstMBI GATC 4 cut(s) 105, 389, 834, 1559
BstMWI GCNNNNNNNGC 8 cut(s) 108, 257, 261, 608, 663, 1249, 1265, 1274
BstNI CCWGG 1 cut(s) 934
BstSCI CCNGG 1 cut(s) 932
BstV1I GCAGC 4 cut(s) 602, 653, 693, 1118
BstV2I GAAGAC 1 cut(s) 223
BstX2I RGATCY 1 cut(s) 1559
BstYI RGATCY 1 cut(s) 1559
Bsu15I ATCGAT 1 cut(s) 1464
Bsu36I CCTNAGG 1 cut(s) 315
BsuRI GGCC 3 cut(s) 134, 251, 260
BsuTUI ATCGAT 1 cut(s) 1464
BtgZI GCGATG 1 cut(s) 540
BtsCI GGATG 7 cut(s) 201, 511, 596, 706, 793, 1188, 1531
BtsI GCAGTG 1 cut(s) 556
BtsIMutI CAGTG 3 cut(s) 556, 1132, 1268
Cac8I GCNNGC 5 cut(s) 253, 262, 613, 731, 1483
CfoI GCGC 2 cut(s) 207, 1106
Cfr10I RCCGGY 3 cut(s) 98, 341, 424
Cfr13I GGNCC 3 cut(s) 84, 869, 997
ClaI ATCGAT 1 cut(s) 1464
CseI GACGC 2 cut(s) 329, 347
Csp6I GTAC 6 cut(s) 172, 359, 365, 739, 1287, 1549
CviAII CATG 8 cut(s) 539, 608, 717, 974, 1278, 1372, 1516, 1545
CviQI GTAC 6 cut(s) 172, 359, 365, 739, 1287, 1549
DdeI CTNAG 3 cut(s) 315, 993, 1158
DpnI GATC 4 cut(s) 107, 391, 836, 1561
DpnII GATC 4 cut(s) 105, 389, 834, 1559
Eam1104I CTCTTC 2 cut(s) 467, 1470
EarI CTCTTC 2 cut(s) 467, 1470
Ecl136II GAGCTC 1 cut(s) 140
Eco147I AGGCCT 1 cut(s) 260
Eco24I GRGCYC 1 cut(s) 142
Eco47I GGWCC 3 cut(s) 84, 869, 997
Eco53kI GAGCTC 1 cut(s) 140
Eco81I CCTNAGG 1 cut(s) 315
EcoICRI GAGCTC 1 cut(s) 140
EcoO109I RGGNCCY 1 cut(s) 997
EcoRII CCWGG 1 cut(s) 932
EcoT22I ATGCAT 1 cut(s) 975
EcoT38I GRGCYC 1 cut(s) 142
FaeI CATG 8 cut(s) 542, 611, 720, 977, 1281, 1375, 1519, 1548
FaqI GGGAC 3 cut(s) 268, 579, 1472
FatI CATG 8 cut(s) 538, 607, 716, 973, 1277, 1371, 1515, 1544
Fnu4HI GCNGC 7 cut(s) 112, 249, 616, 667, 682, 1107, 1145
FokI GGATG 7 cut(s) 208, 518, 603, 713, 800, 1195, 1538
FriOI GRGCYC 1 cut(s) 142
Fsp4HI GCNGC 7 cut(s) 112, 249, 616, 667, 682, 1107, 1145
FspBI CTAG 4 cut(s) 362, 1148, 1284, 1404
GlaI GCGC 2 cut(s) 206, 1105
GluI GCNGC 7 cut(s) 112, 249, 616, 667, 682, 1107, 1145
GsaI CCCAGC 1 cut(s) 1136
GsuI CTGGAG 1 cut(s) 1292
HaeIII GGCC 3 cut(s) 134, 251, 260
HapII CCGG 5 cut(s) 99, 222, 342, 425, 1171
HgaI GACGC 2 cut(s) 329, 347
HhaI GCGC 2 cut(s) 207, 1106
Hin1I GRCGYC 1 cut(s) 339
Hin1II CATG 8 cut(s) 542, 611, 720, 977, 1281, 1375, 1519, 1548
Hin6I GCGC 2 cut(s) 205, 1104
HinP1I GCGC 2 cut(s) 205, 1104
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HindIII AAGCTT 1 cut(s) 404
HinfI GANTC 7 cut(s) 23, 73, 212, 433, 991, 1347, 1412
HpaII CCGG 5 cut(s) 99, 222, 342, 425, 1171
HphI GGTGA 7 cut(s) 134, 356, 641, 656, 979, 1108, 1126
Hpy166II GTNNAC 3 cut(s) 337, 922, 1123
Hpy188I TCNGA 6 cut(s) 118, 245, 432, 438, 1191, 1417
Hpy188III TCNNGA 7 cut(s) 77, 374, 511, 872, 995, 1351, 1557
Hpy8I GTNNAC 3 cut(s) 337, 922, 1123
HpyAV CCTTC 3 cut(s) 269, 847, 1263
HpyCH4III ACNGT 5 cut(s) 282, 1114, 1127, 1444, 1532
HpyF10VI GCNNNNNNNGC 8 cut(s) 108, 257, 261, 608, 663, 1249, 1265, 1274
HpyF3I CTNAG 3 cut(s) 315, 993, 1158
Hsp92I GRCGYC 1 cut(s) 339
Hsp92II CATG 8 cut(s) 542, 611, 720, 977, 1281, 1375, 1519, 1548
HspAI GCGC 2 cut(s) 205, 1104
KpnI GGTACC 1 cut(s) 742
Kzo9I GATC 4 cut(s) 105, 389, 834, 1559
LmnI GCTCC 2 cut(s) 119, 421
Lsp1109I GCAGC 4 cut(s) 602, 653, 693, 1118
LweI GCATC 4 cut(s) 400, 960, 1255, 1456
MaeI CTAG 4 cut(s) 362, 1148, 1284, 1404
MaeIII GTNAC 4 cut(s) 344, 719, 1376, 1444
MalI GATC 4 cut(s) 107, 391, 836, 1561
MbiI CCGCTC 2 cut(s) 114, 248
MboI GATC 4 cut(s) 105, 389, 834, 1559
MflI RGATCY 1 cut(s) 1559
MhlI GDGCHC 2 cut(s) 142, 300
MlyI GAGTC 2 cut(s) 17, 985
MmeI TCCRAC 4 cut(s) 111, 210, 1169, 1500
Mph1103I ATGCAT 1 cut(s) 975
MroXI GAANNNNTTC 2 cut(s) 72, 576
MseI TTAA 2 cut(s) 1038, 1164
MslI CAYNNNNRTG 1 cut(s) 1370
MspI CCGG 5 cut(s) 99, 222, 342, 425, 1171
MspR9I CCNGG 1 cut(s) 934
MvaI CCWGG 1 cut(s) 934
MwoI GCNNNNNNNGC 8 cut(s) 108, 257, 261, 608, 663, 1249, 1265, 1274
NdeII GATC 4 cut(s) 105, 389, 834, 1559
NlaIII CATG 8 cut(s) 542, 611, 720, 977, 1281, 1375, 1519, 1548
NlaIV GGNNCC 4 cut(s) 423, 740, 999, 1432
NmuCI GTSAC 3 cut(s) 344, 719, 1376
NsiI ATGCAT 1 cut(s) 975
NspV TTCGAA 1 cut(s) 1304
PceI AGGCCT 1 cut(s) 260
PdmI GAANNNNTTC 2 cut(s) 72, 576
PfeI GAWTC 5 cut(s) 73, 212, 433, 1347, 1412
PkrI GCNGC 7 cut(s) 113, 250, 617, 668, 683, 1108, 1146
PleI GAGTC 2 cut(s) 17, 985
PpsI GAGTC 2 cut(s) 17, 985
PpuMI RGGWCCY 1 cut(s) 997
Psp124BI GAGCTC 1 cut(s) 142
Psp5II RGGWCCY 1 cut(s) 997
Psp6I CCWGG 1 cut(s) 932
PspFI CCCAGC 1 cut(s) 1132
PspGI CCWGG 1 cut(s) 932
PspN4I GGNNCC 4 cut(s) 423, 740, 999, 1432
PspPI GGNCC 3 cut(s) 84, 869, 997
PspPPI RGGWCCY 1 cut(s) 997
PsuI RGATCY 1 cut(s) 1559
RsaI GTAC 6 cut(s) 173, 360, 366, 740, 1288, 1550
RsaNI GTAC 6 cut(s) 172, 359, 365, 739, 1287, 1549
RseI CAYNNNNRTG 1 cut(s) 1370
SacI GAGCTC 1 cut(s) 142
SaqAI TTAA 2 cut(s) 1038, 1164
SatI GCNGC 7 cut(s) 112, 249, 616, 667, 682, 1107, 1145
Sau3AI GATC 4 cut(s) 105, 389, 834, 1559
Sau96I GGNCC 3 cut(s) 84, 869, 997
ScaI AGTACT 1 cut(s) 360
SchI GAGTC 2 cut(s) 17, 985
ScrFI CCNGG 1 cut(s) 934
SduI GDGCHC 2 cut(s) 142, 300
SfaNI GCATC 4 cut(s) 400, 960, 1255, 1456
SfiI GGCCNNNNNGGCC 1 cut(s) 257
SfuI TTCGAA 1 cut(s) 1304
SgrAI CRCCGGYG 1 cut(s) 341
SinI GGWCC 3 cut(s) 84, 869, 997
SmiMI CAYNNNNRTG 1 cut(s) 1370
SmlI CTYRAG 2 cut(s) 896, 1208
SmoI CTYRAG 2 cut(s) 896, 1208
SpeI ACTAGT 3 cut(s) 361, 1283, 1403
SseBI AGGCCT 1 cut(s) 260
SsiI CCGC 6 cut(s) 112, 150, 248, 464, 1073, 1145
SspI AATATT 1 cut(s) 693
SspMI CTAG 4 cut(s) 362, 1148, 1284, 1404
SstI GAGCTC 1 cut(s) 142
StuI AGGCCT 1 cut(s) 260
StyD4I CCNGG 1 cut(s) 932
TaaI ACNGT 5 cut(s) 282, 1114, 1127, 1444, 1532
TaqI TCGA 4 cut(s) 78, 1057, 1304, 1464
TaqII GACCGA 1 cut(s) 140
TatI WGTACW 1 cut(s) 358
TauI GCSGC 3 cut(s) 114, 251, 1147
TfiI GAWTC 5 cut(s) 73, 212, 433, 1347, 1412
Tru1I TTAA 2 cut(s) 1038, 1164
Tru9I TTAA 2 cut(s) 1038, 1164
TscAI CASTG 3 cut(s) 556, 1132, 1275
TseFI GTSAC 3 cut(s) 344, 719, 1376
TseI GCWGC 4 cut(s) 615, 666, 681, 1106
Tsp45I GTSAC 3 cut(s) 344, 719, 1376
TspDTI ATGAA 4 cut(s) 17, 501, 596, 1504
TspRI CASTG 3 cut(s) 556, 1132, 1275
VpaK11BI GGWCC 3 cut(s) 84, 869, 997
XapI RAATTY 4 cut(s) 164, 760, 1354, 1535
XcmI CCANNNNNNNNNTGG 1 cut(s) 193
XmnI GAANNNNTTC 2 cut(s) 72, 576
XspI CTAG 4 cut(s) 362, 1148, 1284, 1404
ZrmI AGTACT 1 cut(s) 360
Zsp2I ATGCAT 1 cut(s) 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.