Rh6CG500600

repressing transcription factor binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0003679
Physical Location & Seq
Forward (+)
66426537 .. 66428742
2206 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG500600.1

Sequence Viewer

Length: 1974 bp
ATGCCGAGAAAAAGAAAAGTACCAATGATTCCGGTCGCCGTGGAACCCCAGATCTGCCCGGAGGCAGTCCGGTGGTGGATGAACGGCGTCGCCAAGTATGAGAAGAAATCTGTGAAGGTGCGTGAGAAGGCCAGAAAACACATGTCGGCCATGGGCTGGAAATTTTGGCACGCAAGGCTTCAGGGAGATAAACCGGTCGAGTTTAGGTACCAATCTCCGGCCGGGAAATTATACTACTCGCTTAAAACGGCTTGCAAAGCCTGCGTTGACCTAGACCTCACTGGTTTCGAAAGCATCGGTTCAAATAGTTCTGATCCTAATTCTCCTATGGAAGAATCTGAGGAACCAAAATCTTGGATTAATTCCCCCGAAACGAAGCCAAAAAAGAGAGGAAGGAAGAAGAAGATTGATTTATTGATGGCAAAAAAGAGAGGAAGGAAGGGGAAAACTGATTTATTAACGTGTGATCCTAGTTATGATCCTATGGAAGATTGTAAGGAATCAAAATCCTGTACTAATTTCCCCCAATCAAAGCCAAAAAAGAGAGGAAGAAAGAGGAAGATTGATTTAGTAACGCCGGAGGAGGAACAAGAGAGTCTTGAAATTAGTCCCAAGCATAAACCAGGGAAGGTTCTTGCGGAGTTGAAGAGGCTTAGACTTGAAGACGAGCCAAAGTTACAGATTCGAAGTCCGAGAACAATTCTTTCTTCTTTGATAGACAACAAGGTTGTTATGCTACATGCTAAAGTGTACTACCGTGGGAGAAGCGGTGGCAGTCCACTGGCCAAGGGCCAAGTTATTCGTGAGGGGATCATGTGTGATTGTTGCGCTAAGGTGTTTGCTCTCACTGCTTTTGAAGCACATGCTGGTAGCACAAATCACAGGCCAGGTGCCAATATCGTTCTCGAGGAAGATGGGAGGACGATTTCGGATTGCCAACGACAGTTGAAGAGTTTTAAGGATGAGAAGAAGGTGGTGAAGAGTAGTAATAAGATTGACAAGACTGATGATTTATGCAGTGTGTGTCATAATGAGGGTGAGCTGATTCTGTGTGATAGATGTCCTTCTGCATTCCATACTAGCTGTTTGCGTTTGAGTGAAGTGGCAGATGGCGATTGGTTCTGCCCGGCGTGTTGTTGTGGAATCTGTGGCAGTGGAAAACTTGAACAAGGAACTATTCCTGGTGAGATTAGGAAATGTGATCAGTGTGAGCGTAAGTACCATGTTGGGTGCTTGAGAAACAATGAAGTGGTTTGTGAACAGAATTGGTTTTGTAGTACTAAATGTCAAAATATTCTGTTTGGGCTGAAAGGGCTTTTGGGACGGCCAATTTTAGTGGGTGACAACAATCTCACTTGGACACTATTGAAGTCTTCCTCCACTAATAGGGCAGACTCCAGAGAAACTCAGAAAAAGCTCAGGTCGGCTCTTAATGTGTTGCATAAGTGTTTTGAGCCTTCTATTGATCCATACACACAAAGGGACCTCGTCGAAGACATTGTTTTAAATAGAGAGTCAAATCTGAGGCGCTTGAATTTCCGAGGGTTTTACACTGTGGTTTTAGAGAGGAATAAGGAAGTGATTTGTGTGGCTACTGTGAGGATCTATGGGGAAGTGGCAGAAGTACCTCTTGTGGCCACTATGTTCCGACACCGGAGACTTGGGATGTGTCGGATTTTGATGAATGAGCTGGAAAAACAGCTCAAGAAGTTGGGAGTTGAGAGACTGGTTTTGCCTTCTGCTCCTGCTGCACTGGATACATGGACTAACACTTCGATTGGGTTTTCGAAGATGCCTGAAGCTGAAAAACAACAGTTTATTAATTATTTTTTCCTGTATTTTCAAGGCACTGTCATGTGTCATAAATTTTTGAAGCAGAAGAGTGCTACAACAGAAGCAACAATCCCAGAAGAAAACATGGAACTTGATGAGTCTTCAGGTGGCGTCTCTATAATAACACAGGCAGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004407 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0008270 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0015630 GO:0016043 GO:0016462 GO:0016569 GO:0016570 GO:0016575 GO:0016581 GO:0016787 GO:0016810 GO:0016811 GO:0016817 GO:0016818 GO:0016887 GO:0017053 GO:0017111 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0042623 GO:0042826 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0070491 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090545 GO:0090568 GO:0097159 GO:0098732 GO:0140096 GO:0140097 GO:1901363 GO:1901564 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Acetyltransf_10 Agenet Jas PHD

Protein Analysis

657

Amino Acids

74.47

Weight (kDa)

9.09

Isoelectric Point (pI)

50.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7028 PF22970 12 - 90 3.4e-24 Domain of unknown function (DUF7028)
TDBD PF16135 264 - 316 9.3e-20 Tify domain binding domain
PHD-1st_NSD PF23011 334 - 378 4.1e-06 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger 1
PHD PF00628 339 - 378 3e-08 PHD-finger
IDM1_C PF23209 484 - 622 2.7e-50 Increased DNA methylation 1, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 207
AccB1I GGYRCC 2 cut(s) 207, 890
AccB7I CCANNNNNTGG 1 cut(s) 156
AciI CCGC 2 cut(s) 638, 768
AclWI GGATC 6 cut(s) 308, 461, 473, 818, 1460, 1610
AcoI YGGCCR 5 cut(s) 147, 219, 783, 1325, 1635
AcsI RAATTY 3 cut(s) 161, 1534, 1865
AcuI CTGAAG 3 cut(s) 164, 1818, 1920
AcyI GRCGYC 2 cut(s) 87, 1944
AfaI GTAC 7 cut(s) 21, 209, 514, 752, 1220, 1279, 1626
AfiI CCNNNNNNNGG 3 cut(s) 156, 217, 1386
AflIII ACRYGT 2 cut(s) 141, 461
AgeI ACCGGT 1 cut(s) 193
AjnI CCWGG 3 cut(s) 622, 886, 1180
AjuI GAANNNNNNNTTGG 2 cut(s) 1301, 1333
AluBI AGCT 6 cut(s) 1042, 1083, 1417, 1690, 1702, 1802
AluI AGCT 6 cut(s) 1042, 1083, 1417, 1690, 1702, 1802
Alw26I GTCTC 3 cut(s) 1651, 1717, 1951
AlwI GGATC 6 cut(s) 308, 461, 473, 818, 1460, 1610
Ama87I CYCGRG 1 cut(s) 905
AoxI GGCC 8 cut(s) 129, 147, 219, 783, 790, 884, 1325, 1635
ApeKI GCWGC 1 cut(s) 1748
ApoI RAATTY 3 cut(s) 161, 1534, 1865
ArsI GACNNNNNNTTYG 2 cut(s) 1756, 1788
AseI ATTAAT 2 cut(s) 360, 1821
AsiGI ACCGGT 1 cut(s) 193
Asp718I GGTACC 1 cut(s) 207
AspLEI GCGC 2 cut(s) 830, 1530
AspS9I GGNCC 2 cut(s) 790, 1483
AsuC2I CCSGG 3 cut(s) 59, 223, 1127
AsuHPI GGTGA 4 cut(s) 988, 1049, 1196, 1352
AsuII TTCGAA 3 cut(s) 288, 685, 1787
AvaI CYCGRG 1 cut(s) 905
AvaII GGWCC 1 cut(s) 1483
BalI TGGCCA 2 cut(s) 785, 1637
BanI GGYRCC 2 cut(s) 207, 890
BbsI GAAGAC 4 cut(s) 669, 1365, 1500, 1926
BbvI GCAGC 1 cut(s) 1735
BccI CCATC 3 cut(s) 412, 908, 1103
BceAI ACGGC 4 cut(s) 23, 100, 264, 1340
BciT130I CCWGG 3 cut(s) 624, 888, 1182
BciVI GTATCC 1 cut(s) 1750
BclI TGATCA 1 cut(s) 1201
BcnI CCSGG 3 cut(s) 59, 223, 1127
BcoDI GTCTC 3 cut(s) 1651, 1717, 1951
BfaI CTAG 3 cut(s) 272, 471, 1080
BfoI RGCGCY 1 cut(s) 1531
BfuI GTATCC 1 cut(s) 1750
BglII AGATCT 1 cut(s) 51
BisI GCNGC 1 cut(s) 1749
BlsI GCNGC 1 cut(s) 1750
BmcAI AGTACT 1 cut(s) 1279
Bme1390I CCNGG 6 cut(s) 59, 223, 624, 888, 1127, 1182
Bme18I GGWCC 1 cut(s) 1483
BmeT110I CYCGRG 1 cut(s) 905
BmgT120I GGNCC 2 cut(s) 790, 1483
BmiI GGNNCC 5 cut(s) 45, 209, 345, 892, 1484
BmrFI CCNGG 6 cut(s) 59, 223, 624, 888, 1127, 1182
BmsI GCATC 2 cut(s) 303, 1782
BpiI GAAGAC 4 cut(s) 669, 1365, 1500, 1926
BpmI CTGGAG 1 cut(s) 1381
Bpu10I CCTNAGC 2 cut(s) 831, 1418
Bpu14I TTCGAA 3 cut(s) 288, 685, 1787
BpuEI CTTGAG 2 cut(s) 1255, 1688
BpuMI CCSGG 3 cut(s) 59, 223, 1127
BsaHI GRCGYC 2 cut(s) 87, 1944
BsaJI CCNNGG 6 cut(s) 39, 150, 623, 757, 786, 1540
BsaWI WCCGGW 4 cut(s) 31, 69, 193, 1653
BsaXI ACNNNNNCTCC 2 cut(s) 754, 784
Bsc4I CCNNNNNNNGG 3 cut(s) 156, 217, 1386
Bse118I RCCGGY 1 cut(s) 193
Bse1I ACTGG 4 cut(s) 286, 786, 1731, 1758
BseBI CCWGG 3 cut(s) 624, 888, 1182
BseDI CCNNGG 6 cut(s) 39, 150, 623, 757, 786, 1540
BseGI GGATG 3 cut(s) 84, 967, 1671
BseLI CCNNNNNNNGG 3 cut(s) 156, 217, 1386
BseMII CTCAG 4 cut(s) 330, 1421, 1432, 1514
BseNI ACTGG 4 cut(s) 286, 786, 1731, 1758
BseRI GAGGAG 1 cut(s) 596
BseX3I CGGCCG 1 cut(s) 219
BseXI GCAGC 1 cut(s) 1735
BsgI GTGCAG 1 cut(s) 1734
Bsh1285I CGRYCG 3 cut(s) 36, 198, 222
BshFI GGCC 8 cut(s) 131, 149, 221, 785, 792, 886, 1327, 1637
BshNI GGYRCC 2 cut(s) 207, 890
BshTI ACCGGT 1 cut(s) 193
BsiEI CGRYCG 3 cut(s) 36, 198, 222
BsiHKCI CYCGRG 1 cut(s) 905
BsiSI CCGG 9 cut(s) 32, 59, 70, 194, 218, 222, 578, 1127, 1654
BslFI GGGAC 3 cut(s) 594, 1335, 1496
BslI CCNNNNNNNGG 3 cut(s) 156, 217, 1386
BsmAI GTCTC 3 cut(s) 1651, 1717, 1951
BsmBI CGTCTC 1 cut(s) 1951
BsmFI GGGAC 3 cut(s) 594, 1335, 1496
BsmI GAATGC 1 cut(s) 1070
BsnI GGCC 8 cut(s) 131, 149, 221, 785, 792, 886, 1327, 1637
BsoBI CYCGRG 1 cut(s) 905
Bsp119I TTCGAA 3 cut(s) 288, 685, 1787
Bsp143I GATC 8 cut(s) 51, 313, 466, 478, 810, 1201, 1465, 1602
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 2 cut(s) 638, 768
BspANI GGCC 8 cut(s) 131, 149, 221, 785, 792, 886, 1327, 1637
BspCNI CTCAG 4 cut(s) 331, 1420, 1431, 1515
BspLI GGNNCC 5 cut(s) 45, 209, 345, 892, 1484
BspPI GGATC 6 cut(s) 308, 461, 473, 818, 1460, 1610
BspT104I TTCGAA 3 cut(s) 288, 685, 1787
BspT107I GGYRCC 2 cut(s) 207, 890
BsrFI RCCGGY 1 cut(s) 193
BsrI ACTGG 4 cut(s) 286, 786, 1731, 1758
BssAI RCCGGY 1 cut(s) 193
BssECI CCNNGG 6 cut(s) 39, 150, 623, 757, 786, 1540
BssMI GATC 8 cut(s) 51, 313, 466, 478, 810, 1201, 1465, 1602
BssNI GRCGYC 2 cut(s) 87, 1944
BssT1I CCWWGG 2 cut(s) 150, 786
Bst2UI CCWGG 3 cut(s) 624, 888, 1182
Bst4CI ACNGT 6 cut(s) 758, 945, 1555, 1597, 1815, 1852
Bst6I CTCTTC 4 cut(s) 641, 944, 974, 1874
BstACI GRCGYC 2 cut(s) 87, 1944
BstAPI GCANNNNNTGC 1 cut(s) 261
BstBI TTCGAA 3 cut(s) 288, 685, 1787
BstC8I GCNNGC 3 cut(s) 171, 253, 262
BstDEI CTNAG 6 cut(s) 339, 653, 831, 1407, 1418, 1523
BstDSI CCRYGG 3 cut(s) 39, 150, 757
BstF5I GGATG 3 cut(s) 84, 967, 1671
BstH2I RGCGCY 1 cut(s) 1531
BstHHI GCGC 2 cut(s) 830, 1530
BstKTI GATC 8 cut(s) 54, 316, 469, 481, 813, 1204, 1468, 1605
BstMAI GTCTC 3 cut(s) 1651, 1717, 1951
BstMBI GATC 8 cut(s) 51, 313, 466, 478, 810, 1201, 1465, 1602
BstMCI CGRYCG 3 cut(s) 36, 198, 222
BstMWI GCNNNNNNNGC 7 cut(s) 175, 257, 261, 848, 857, 1312, 1748
BstNI CCWGG 3 cut(s) 624, 888, 1182
BstNSI RCATGY 3 cut(s) 145, 743, 866
BstSCI CCNGG 6 cut(s) 57, 221, 622, 886, 1125, 1180
BstV1I GCAGC 1 cut(s) 1735
BstV2I GAAGAC 4 cut(s) 669, 1365, 1500, 1926
BstX2I RGATCY 2 cut(s) 51, 1602
BstXI CCANNNNNNTGG 1 cut(s) 354
BstYI RGATCY 2 cut(s) 51, 1602
BstZI CGGCCG 1 cut(s) 219
BsuI GTATCC 1 cut(s) 1750
BsuRI GGCC 8 cut(s) 131, 149, 221, 785, 792, 886, 1327, 1637
BtgI CCRYGG 3 cut(s) 39, 150, 757
BtsCI GGATG 3 cut(s) 84, 967, 1671
BtsI GCAGTG 3 cut(s) 846, 1024, 1159
BtsIMutI CAGTG 9 cut(s) 279, 779, 846, 1024, 1159, 1211, 1551, 1751, 1848
Cac8I GCNNGC 3 cut(s) 171, 253, 262
CfoI GCGC 2 cut(s) 830, 1530
Cfr10I RCCGGY 1 cut(s) 193
Cfr13I GGNCC 2 cut(s) 790, 1483
CseI GACGC 2 cut(s) 76, 1933
Csp6I GTAC 7 cut(s) 20, 208, 513, 751, 1219, 1278, 1625
CspAI ACCGGT 1 cut(s) 193
CspCI CAANNNNNGTGG 2 cut(s) 1317, 1352
CviAII CATG 9 cut(s) 142, 151, 740, 814, 863, 1223, 1761, 1855, 1918
CviQI GTAC 7 cut(s) 20, 208, 513, 751, 1219, 1278, 1625
DdeI CTNAG 6 cut(s) 339, 653, 831, 1407, 1418, 1523
DpnI GATC 8 cut(s) 53, 315, 468, 480, 812, 1203, 1467, 1604
DpnII GATC 8 cut(s) 51, 313, 466, 478, 810, 1201, 1465, 1602
DraI TTTAAA 1 cut(s) 1506
EaeI YGGCCR 5 cut(s) 147, 219, 783, 1325, 1635
EagI CGGCCG 1 cut(s) 219
Eam1104I CTCTTC 4 cut(s) 641, 944, 974, 1874
EarI CTCTTC 4 cut(s) 641, 944, 974, 1874
EclXI CGGCCG 1 cut(s) 219
Eco130I CCWWGG 2 cut(s) 150, 786
Eco47I GGWCC 1 cut(s) 1483
Eco52I CGGCCG 1 cut(s) 219
Eco57I CTGAAG 3 cut(s) 164, 1818, 1920
Eco88I CYCGRG 1 cut(s) 905
EcoO109I RGGNCCY 1 cut(s) 1483
EcoRII CCWGG 3 cut(s) 622, 886, 1180
EcoT14I CCWWGG 2 cut(s) 150, 786
ErhI CCWWGG 2 cut(s) 150, 786
Esp3I CGTCTC 1 cut(s) 1951
FaeI CATG 9 cut(s) 145, 154, 743, 817, 866, 1226, 1764, 1858, 1921
FalI AAGNNNNNCTT 4 cut(s) 582, 614, 1614, 1646
FaqI GGGAC 3 cut(s) 594, 1335, 1496
FatI CATG 9 cut(s) 141, 150, 739, 813, 862, 1222, 1760, 1854, 1917
FbaI TGATCA 1 cut(s) 1201
Fnu4HI GCNGC 1 cut(s) 1749
FokI GGATG 3 cut(s) 91, 974, 1678
Fsp4HI GCNGC 1 cut(s) 1749
FspBI CTAG 3 cut(s) 272, 471, 1080
GlaI GCGC 2 cut(s) 829, 1529
GluI GCNGC 1 cut(s) 1749
GsuI CTGGAG 1 cut(s) 1381
HaeII RGCGCY 1 cut(s) 1531
HaeIII GGCC 8 cut(s) 131, 149, 221, 785, 792, 886, 1327, 1637
HapII CCGG 9 cut(s) 32, 59, 70, 194, 218, 222, 578, 1127, 1654
HgaI GACGC 2 cut(s) 76, 1933
HhaI GCGC 2 cut(s) 830, 1530
Hin1I GRCGYC 2 cut(s) 87, 1944
Hin1II CATG 9 cut(s) 145, 154, 743, 817, 866, 1226, 1764, 1858, 1921
Hin6I GCGC 2 cut(s) 828, 1528
HinP1I GCGC 2 cut(s) 828, 1528
HincII GTYRAC 1 cut(s) 268
HindII GTYRAC 1 cut(s) 268
HpaII CCGG 9 cut(s) 32, 59, 70, 194, 218, 222, 578, 1127, 1654
HphI GGTGA 4 cut(s) 988, 1049, 1196, 1352
Hpy166II GTNNAC 4 cut(s) 268, 751, 779, 1259
Hpy188I TCNGA 9 cut(s) 313, 340, 693, 931, 1410, 1524, 1541, 1649, 1674
Hpy188III TCNNGA 5 cut(s) 599, 803, 905, 1398, 1705
Hpy8I GTNNAC 4 cut(s) 268, 751, 779, 1259
Hpy99I CGWCG 2 cut(s) 92, 1493
HpyCH4III ACNGT 6 cut(s) 758, 945, 1555, 1597, 1815, 1852
HpyCH4IV ACGT 1 cut(s) 461
HpyCH4V TGCA 5 cut(s) 255, 1017, 1070, 1441, 1751
HpyF10VI GCNNNNNNNGC 7 cut(s) 175, 257, 261, 848, 857, 1312, 1748
HpyF3I CTNAG 6 cut(s) 339, 653, 831, 1407, 1418, 1523
HpySE526I ACGT 1 cut(s) 461
Hsp92I GRCGYC 2 cut(s) 87, 1944
Hsp92II CATG 9 cut(s) 145, 154, 743, 817, 866, 1226, 1764, 1858, 1921
HspAI GCGC 2 cut(s) 828, 1528
KpnI GGTACC 1 cut(s) 211
Ksp22I TGATCA 1 cut(s) 1201
Kzo9I GATC 8 cut(s) 51, 313, 466, 478, 810, 1201, 1465, 1602
LmnI GCTCC 1 cut(s) 1747
Lsp1109I GCAGC 1 cut(s) 1735
LweI GCATC 2 cut(s) 303, 1782
MaeI CTAG 3 cut(s) 272, 471, 1080
MaeII ACGT 1 cut(s) 461
MaeIII GTNAC 3 cut(s) 571, 675, 1340
MalI GATC 8 cut(s) 53, 315, 468, 480, 812, 1203, 1467, 1604
MboI GATC 8 cut(s) 51, 313, 466, 478, 810, 1201, 1465, 1602
MflI RGATCY 2 cut(s) 51, 1602
MlsI TGGCCA 2 cut(s) 785, 1637
MluNI TGGCCA 2 cut(s) 785, 1637
MlyI GAGTC 4 cut(s) 604, 1388, 1523, 1940
MmeI TCCRAC 2 cut(s) 1652, 1672
Mox20I TGGCCA 2 cut(s) 785, 1637
MscI TGGCCA 2 cut(s) 785, 1637
MseI TTAA 7 cut(s) 243, 360, 458, 957, 1431, 1505, 1821
MslI CAYNNNNRTG 1 cut(s) 1853
Msp20I TGGCCA 2 cut(s) 785, 1637
MspI CCGG 9 cut(s) 32, 59, 70, 194, 218, 222, 578, 1127, 1654
MspR9I CCNGG 6 cut(s) 59, 223, 624, 888, 1127, 1182
Mva1269I GAATGC 1 cut(s) 1070
MvaI CCWGG 3 cut(s) 624, 888, 1182
MwoI GCNNNNNNNGC 7 cut(s) 175, 257, 261, 848, 857, 1312, 1748
NciI CCSGG 3 cut(s) 59, 223, 1127
NcoI CCATGG 1 cut(s) 150
NdeII GATC 8 cut(s) 51, 313, 466, 478, 810, 1201, 1465, 1602
NlaIII CATG 9 cut(s) 145, 154, 743, 817, 866, 1226, 1764, 1858, 1921
NlaIV GGNNCC 5 cut(s) 45, 209, 345, 892, 1484
NmeAIII GCCGAG 1 cut(s) 30
NmuCI GTSAC 1 cut(s) 1340
NspI RCATGY 3 cut(s) 145, 743, 866
NspV TTCGAA 3 cut(s) 288, 685, 1787
PaeR7I CTCGAG 1 cut(s) 905
PciI ACATGT 1 cut(s) 141
PctI GAATGC 1 cut(s) 1070
PfeI GAWTC 6 cut(s) 28, 335, 500, 682, 1045, 1143
PflFI GACNNNGTC 1 cut(s) 1487
PflMI CCANNNNNTGG 1 cut(s) 156
PinAI ACCGGT 1 cut(s) 193
PkrI GCNGC 1 cut(s) 1750
PleI GAGTC 4 cut(s) 603, 1388, 1522, 1939
PpsI GAGTC 4 cut(s) 603, 1388, 1522, 1939
PpuMI RGGWCCY 1 cut(s) 1483
PscI ACATGT 1 cut(s) 141
PshBI ATTAAT 2 cut(s) 360, 1821
Psp5II RGGWCCY 1 cut(s) 1483
Psp6I CCWGG 3 cut(s) 622, 886, 1180
PspGI CCWGG 3 cut(s) 622, 886, 1180
PspN4I GGNNCC 5 cut(s) 45, 209, 345, 892, 1484
PspPI GGNCC 2 cut(s) 790, 1483
PspPPI RGGWCCY 1 cut(s) 1483
PsuI RGATCY 2 cut(s) 51, 1602
PsyI GACNNNGTC 1 cut(s) 1487
RsaI GTAC 7 cut(s) 21, 209, 514, 752, 1220, 1279, 1626
RsaNI GTAC 7 cut(s) 20, 208, 513, 751, 1219, 1278, 1625
RseI CAYNNNNRTG 1 cut(s) 1853
SaqAI TTAA 7 cut(s) 243, 360, 458, 957, 1431, 1505, 1821
SatI GCNGC 1 cut(s) 1749
Sau3AI GATC 8 cut(s) 51, 313, 466, 478, 810, 1201, 1465, 1602
Sau96I GGNCC 2 cut(s) 790, 1483
ScaI AGTACT 1 cut(s) 1279
SchI GAGTC 4 cut(s) 604, 1388, 1523, 1940
ScrFI CCNGG 6 cut(s) 59, 223, 624, 888, 1127, 1182
SfaNI GCATC 2 cut(s) 303, 1782
Sfr274I CTCGAG 1 cut(s) 905
SfuI TTCGAA 3 cut(s) 288, 685, 1787
SinI GGWCC 1 cut(s) 1483
SlaI CTCGAG 1 cut(s) 905
SmiMI CAYNNNNRTG 1 cut(s) 1853
SmlI CTYRAG 3 cut(s) 905, 1234, 1703
SmoI CTYRAG 3 cut(s) 905, 1234, 1703
SsiI CCGC 2 cut(s) 638, 768
SspI AATATT 1 cut(s) 1294
SspMI CTAG 3 cut(s) 272, 471, 1080
StyD4I CCNGG 6 cut(s) 57, 221, 622, 886, 1125, 1180
StyI CCWWGG 2 cut(s) 150, 786
TaaI ACNGT 6 cut(s) 758, 945, 1555, 1597, 1815, 1852
TaiI ACGT 1 cut(s) 464
TaqI TCGA 7 cut(s) 198, 288, 685, 906, 1491, 1775, 1787
TatI WGTACW 3 cut(s) 512, 750, 1277
TfiI GAWTC 6 cut(s) 28, 335, 500, 682, 1045, 1143
Tru1I TTAA 7 cut(s) 243, 360, 458, 957, 1431, 1505, 1821
Tru9I TTAA 7 cut(s) 243, 360, 458, 957, 1431, 1505, 1821
TscAI CASTG 9 cut(s) 286, 786, 853, 1024, 1159, 1211, 1558, 1758, 1855
TseFI GTSAC 1 cut(s) 1340
TseI GCWGC 1 cut(s) 1748
Tsp45I GTSAC 1 cut(s) 1340
TspDTI ATGAA 3 cut(s) 95, 1260, 1697
TspRI CASTG 9 cut(s) 286, 786, 853, 1024, 1159, 1211, 1558, 1758, 1855
Tth111I GACNNNGTC 1 cut(s) 1487
Van91I CCANNNNNTGG 1 cut(s) 156
VpaK11BI GGWCC 1 cut(s) 1483
VspI ATTAAT 2 cut(s) 360, 1821
XapI RAATTY 3 cut(s) 161, 1534, 1865
XceI RCATGY 3 cut(s) 145, 743, 866
XhoI CTCGAG 1 cut(s) 905
XspI CTAG 3 cut(s) 272, 471, 1080
ZrmI AGTACT 1 cut(s) 1279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.