Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007283.1

Orthogroup ID

OG0003679

Physical Location & Seq

Genomic Coordinates Forward (+)

56166 .. 58139

Gene Structure 1974 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007283.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

atgccgagaaaaagaaaagtaccaatgattccggtcaccgtggaaccccagatctgcccggaggcagtccggtggtggatgaacggcgtcgccaagtatgagaagaaatctgtgaaggtgcgtgagaaggccagaaaacacatgtcggccatgggctggaaattttggcacgcaaggcttcagggagataaaccggtcgagtttaggtaccaatctccggccgggaaattatactactcgcttaaaacggcttgcaaagcctgcgttgacctagacctcactggtttcgaaagcatcggttcaaatagttctgatcctaattctcctatggaagaatctaaggaaccaaaatcttggattaattcccccgaaacaaagccaaaaaagagaggaaggaagaagaagattgatttattgatggcaaaaaagagaggaaggaagaggaaaactgatttattaacttgtgatcctagttatgatcctatggaagattgcaaggaatctaaatcctgtactaatttcccccaatcaaagccaaaaaagagaggaagaaagaggaagattgatttagtaacgccggaggaggaacaagagagtcttaaaattagtcctaagaataaaccagggaaggttcttgcggagttgaagaggcttagacttgaagacgagccaaagttacagattcgaagtccgagaacaattctttcttctttgatagacaacaaggttgttatgctacatgctaaagtgtactaccgtgggagaagcggtggcagtccactggccaagggccaagttcttcgtgaggggatcatgtgtgattgttgcgctaaggtgtttgctctcactgcttttgaagcacatgctggtagcacaaatcacaggccgggtgccaatatcgttctcgaggaagatgggaggacgatttcagattgccaacgacagatgaagagttttaaggatgagaagaaggtggtgaagagtagtaataagattgacaagactgatgatttatgcagtgtgtgtcataatgagggtgagctgattctgtgtgatagatgtccttctgcattccatactagctgtttgtgtttgagtgaagtggcagatggcgattggttctgcccggcgtgttgttgtggaatctgtggcagtggaaaacttgaacaaggaactattcctggtgagattaggaaatgtgatcagtgtgagcgtaagtaccatgttgggtgcttgagaaacaatgaagtggtttgtgaacagaattggttttgtagtagtaaatgtcaaaatattctgtttgggctgaaagggcttttgggacggccaattttagtgggtgacaacaatctcacttggacactattgaagtcttcctccactaatagggcagactccagagaaactcataaaaagctcaggtcggctcttaatgtgttgcataagtgttttgagccttctattgatccatacacacaaagggacctcgtcgaagacattgttttaaatagagagtcgaatctgaggcgcttgaatttccgagggttttacactctggttttagagaggaataaggaagtgatttgtgcggctactgtgaggatctatggggaagtggcagaaatacctcttgtggccactatgttccgacaccggagacttgggatgtgtcggattttgatgaatgagctggaaaaacagctcaagaagttgggagttgagagactggttttgccttctgctcctgctgcactggatacatggactaacacttcgattgggttttcgaagatgcctgaagctgaaaaacaacagtttattaattattttttcctgtattttcaaggcactgtcatgtgtcataaatttttgaagcagaggagtgctacaacagaagcaacaatcccagaagaaaacatggaacttgatgagtcttcaggtggcgtctctataataacacaggcagaagattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004407 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0008270 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0015630 GO:0016043 GO:0016462 GO:0016569 GO:0016570 GO:0016575 GO:0016581 GO:0016787 GO:0016810 GO:0016811 GO:0016817 GO:0016818 GO:0016887 GO:0017053 GO:0017111 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0042623 GO:0042826 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0070491 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090545 GO:0090568 GO:0097159 GO:0098732 GO:0140096 GO:0140097 GO:1901363 GO:1901564 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1 Acetyltransf_10 Agenet Jas PHD

Protein Analysis

657

Amino Acids

74.56

Weight (kDa)

9.18

Isoelectric Point (pI)

51.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63900
fragaria_vesca	FvH4_2g33101 FvH4_2g33110
malus_domestica	MD03G1066400.v1.1 MD08G1084100.v1.1 MD15G1070200.v1.1
prunus_persica	Prupe.1G423000_v2.0.a1
pyrus_communis	pycom08g06970
rosa_chinensis	RchiOBHm_Chr6g0309551 RchiOBHm_Chr6g0309571
rosa_laevigata	RLG00000010552 RLG00000010554
rosa_multiflora	Rmu_co8092108.1_g000001 Rmu_co8455997.1_g000001 Rmu_co8522085.1_g000002 Rmu_sc0007283.1_g000012 Rmu_sc0007283.1_g000014 Rmu_sc0024715.1_g000002 Rmu_sc0024715.1_g000003 Rmu_sc0030536.1_g000004 Rmu_sc0042371.1_g000001
rosa_roxburghii	Rroxscaffold_7G00159310
rosa_rugosa	Rorug06G0372800 Rorug06G0372900
rosa_samantha	Rh6AG486200 Rh6AG486400 Rh6BG204300 Rh6BG495600 Rh6BG495800 Rh6CG500600 Rh6CG500700 Rh6DG486500 Rh6DG486600
rosa_wichuraiana	Rw6G042350 Rw6G042360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	207
AccB1I	GGYRCC	2 cut(s)	207, 890
AccB7I	CCANNNNNTGG	1 cut(s)	156
AciI	CCGC	3 cut(s)	638, 768, 1589
AclWI	GGATC	6 cut(s)	308, 461, 473, 818, 1460, 1610
AcoI	YGGCCR	5 cut(s)	147, 219, 783, 1325, 1635
AcsI	RAATTY	3 cut(s)	161, 1534, 1865
AcuI	CTGAAG	3 cut(s)	164, 1818, 1920
AcyI	GRCGYC	2 cut(s)	87, 1944
AfaI	GTAC	5 cut(s)	21, 209, 514, 752, 1220
AfiI	CCNNNNNNNGG	3 cut(s)	156, 217, 1386
AflIII	ACRYGT	1 cut(s)	141
AgeI	ACCGGT	1 cut(s)	193
AgsI	TTSAA	9 cut(s)	303, 646, 662, 857, 1166, 1369, 1534, 1844, 1873
AjnI	CCWGG	2 cut(s)	622, 1180
AjuI	GAANNNNNNNTTGG	2 cut(s)	1301, 1333
AluBI	AGCT	6 cut(s)	1042, 1083, 1417, 1690, 1702, 1802
AluI	AGCT	6 cut(s)	1042, 1083, 1417, 1690, 1702, 1802
Alw26I	GTCTC	3 cut(s)	1651, 1717, 1951
AlwI	GGATC	6 cut(s)	308, 461, 473, 818, 1460, 1610
Ama87I	CYCGRG	1 cut(s)	905
AoxI	GGCC	8 cut(s)	129, 147, 219, 783, 790, 884, 1325, 1635
ApeKI	GCWGC	1 cut(s)	1748
ApoI	RAATTY	3 cut(s)	161, 1534, 1865
ArsI	GACNNNNNNTTYG	2 cut(s)	1756, 1788
AseI	ATTAAT	2 cut(s)	360, 1821
AsiGI	ACCGGT	1 cut(s)	193
Asp718I	GGTACC	1 cut(s)	207
AspLEI	GCGC	2 cut(s)	830, 1530
AspS9I	GGNCC	2 cut(s)	790, 1483
AsuC2I	CCSGG	4 cut(s)	59, 223, 888, 1127
AsuHPI	GGTGA	5 cut(s)	28, 988, 1049, 1196, 1352
AsuII	TTCGAA	3 cut(s)	288, 685, 1787
AvaI	CYCGRG	1 cut(s)	905
AvaII	GGWCC	1 cut(s)	1483
BalI	TGGCCA	2 cut(s)	785, 1637
BanI	GGYRCC	2 cut(s)	207, 890
BbsI	GAAGAC	4 cut(s)	669, 1365, 1500, 1926
BbvI	GCAGC	1 cut(s)	1735
BccI	CCATC	3 cut(s)	412, 908, 1103
BceAI	ACGGC	3 cut(s)	100, 264, 1340
BciT130I	CCWGG	2 cut(s)	624, 1182
BciVI	GTATCC	1 cut(s)	1750
BclI	TGATCA	1 cut(s)	1201
BcnI	CCSGG	4 cut(s)	59, 223, 888, 1127
BcoDI	GTCTC	3 cut(s)	1651, 1717, 1951
BfaI	CTAG	3 cut(s)	272, 471, 1080
BfoI	RGCGCY	1 cut(s)	1531
BfuI	GTATCC	1 cut(s)	1750
BglII	AGATCT	1 cut(s)	51
BisI	GCNGC	2 cut(s)	1590, 1749
BlsI	GCNGC	2 cut(s)	1591, 1750
Bme1390I	CCNGG	6 cut(s)	59, 223, 624, 888, 1127, 1182
Bme18I	GGWCC	1 cut(s)	1483
BmeT110I	CYCGRG	1 cut(s)	905
BmgT120I	GGNCC	2 cut(s)	790, 1483
BmiI	GGNNCC	5 cut(s)	45, 209, 345, 892, 1484
BmrFI	CCNGG	6 cut(s)	59, 223, 624, 888, 1127, 1182
BmsI	GCATC	2 cut(s)	303, 1782
BpiI	GAAGAC	4 cut(s)	669, 1365, 1500, 1926
BpmI	CTGGAG	1 cut(s)	1381
Bpu10I	CCTNAGC	2 cut(s)	831, 1418
Bpu14I	TTCGAA	3 cut(s)	288, 685, 1787
BpuEI	CTTGAG	2 cut(s)	1255, 1688
BpuMI	CCSGG	4 cut(s)	59, 223, 888, 1127
BsaHI	GRCGYC	2 cut(s)	87, 1944
BsaJI	CCNNGG	6 cut(s)	39, 150, 623, 757, 786, 1540
BsaWI	WCCGGW	4 cut(s)	31, 69, 193, 1653
BsaXI	ACNNNNNCTCC	2 cut(s)	754, 784
Bsc4I	CCNNNNNNNGG	3 cut(s)	156, 217, 1386
Bse118I	RCCGGY	1 cut(s)	193
Bse1I	ACTGG	4 cut(s)	286, 786, 1731, 1758
BseBI	CCWGG	2 cut(s)	624, 1182
BseDI	CCNNGG	6 cut(s)	39, 150, 623, 757, 786, 1540
BseGI	GGATG	3 cut(s)	84, 967, 1671
BseLI	CCNNNNNNNGG	3 cut(s)	156, 217, 1386
BseMII	CTCAG	2 cut(s)	1432, 1514
BseNI	ACTGG	4 cut(s)	286, 786, 1731, 1758
BseRI	GAGGAG	2 cut(s)	596, 1894
BseX3I	CGGCCG	1 cut(s)	219
BseXI	GCAGC	1 cut(s)	1735
BsgI	GTGCAG	1 cut(s)	1734
Bsh1285I	CGRYCG	2 cut(s)	198, 222
BshFI	GGCC	8 cut(s)	131, 149, 221, 785, 792, 886, 1327, 1637
BshNI	GGYRCC	2 cut(s)	207, 890
BshTI	ACCGGT	1 cut(s)	193
BsiEI	CGRYCG	2 cut(s)	198, 222
BsiHKCI	CYCGRG	1 cut(s)	905
BslFI	GGGAC	2 cut(s)	1335, 1496
BslI	CCNNNNNNNGG	3 cut(s)	156, 217, 1386
BsmAI	GTCTC	3 cut(s)	1651, 1717, 1951
BsmBI	CGTCTC	1 cut(s)	1951
BsmFI	GGGAC	2 cut(s)	1335, 1496
BsmI	GAATGC	1 cut(s)	1070
BsnI	GGCC	8 cut(s)	131, 149, 221, 785, 792, 886, 1327, 1637
BsoBI	CYCGRG	1 cut(s)	905
Bsp119I	TTCGAA	3 cut(s)	288, 685, 1787
Bsp143I	GATC	8 cut(s)	51, 313, 466, 478, 810, 1201, 1465, 1602
Bsp19I	CCATGG	1 cut(s)	150
BspACI	CCGC	3 cut(s)	638, 768, 1589
BspANI	GGCC	8 cut(s)	131, 149, 221, 785, 792, 886, 1327, 1637
BspCNI	CTCAG	2 cut(s)	1431, 1515
BspLI	GGNNCC	5 cut(s)	45, 209, 345, 892, 1484
BspPI	GGATC	6 cut(s)	308, 461, 473, 818, 1460, 1610
BspT104I	TTCGAA	3 cut(s)	288, 685, 1787
BspT107I	GGYRCC	2 cut(s)	207, 890
BsrFI	RCCGGY	1 cut(s)	193
BsrI	ACTGG	4 cut(s)	286, 786, 1731, 1758
BssAI	RCCGGY	1 cut(s)	193
BssECI	CCNNGG	6 cut(s)	39, 150, 623, 757, 786, 1540
BssMI	GATC	8 cut(s)	51, 313, 466, 478, 810, 1201, 1465, 1602
BssNI	GRCGYC	2 cut(s)	87, 1944
BssT1I	CCWWGG	2 cut(s)	150, 786
Bst2UI	CCWGG	2 cut(s)	624, 1182
Bst4CI	ACNGT	5 cut(s)	40, 758, 1597, 1815, 1852
Bst6I	CTCTTC	4 cut(s)	434, 641, 944, 974
BstACI	GRCGYC	2 cut(s)	87, 1944
BstAPI	GCANNNNNTGC	1 cut(s)	261
BstBI	TTCGAA	3 cut(s)	288, 685, 1787
BstC8I	GCNNGC	3 cut(s)	171, 253, 262
BstDEI	CTNAG	6 cut(s)	339, 612, 653, 831, 1418, 1523
BstDSI	CCRYGG	3 cut(s)	39, 150, 757
BstEII	GGTNACC	1 cut(s)	34
BstF5I	GGATG	3 cut(s)	84, 967, 1671
BstH2I	RGCGCY	1 cut(s)	1531
BstHHI	GCGC	2 cut(s)	830, 1530
BstKTI	GATC	8 cut(s)	54, 316, 469, 481, 813, 1204, 1468, 1605
BstMAI	GTCTC	3 cut(s)	1651, 1717, 1951
BstMBI	GATC	8 cut(s)	51, 313, 466, 478, 810, 1201, 1465, 1602
BstMCI	CGRYCG	2 cut(s)	198, 222
BstMWI	GCNNNNNNNGC	7 cut(s)	175, 257, 261, 848, 857, 1312, 1748
BstNI	CCWGG	2 cut(s)	624, 1182
BstNSI	RCATGY	3 cut(s)	145, 743, 866
BstPI	GGTNACC	1 cut(s)	34
BstSCI	CCNGG	6 cut(s)	57, 221, 622, 886, 1125, 1180
BstV1I	GCAGC	1 cut(s)	1735
BstV2I	GAAGAC	4 cut(s)	669, 1365, 1500, 1926
BstX2I	RGATCY	2 cut(s)	51, 1602
BstXI	CCANNNNNNTGG	1 cut(s)	354
BstYI	RGATCY	2 cut(s)	51, 1602
BstZI	CGGCCG	1 cut(s)	219
BsuI	GTATCC	1 cut(s)	1750
BsuRI	GGCC	8 cut(s)	131, 149, 221, 785, 792, 886, 1327, 1637
BtgI	CCRYGG	3 cut(s)	39, 150, 757
BtsCI	GGATG	3 cut(s)	84, 967, 1671
BtsI	GCAGTG	3 cut(s)	846, 1024, 1159
BtsIMutI	CAGTG	8 cut(s)	279, 779, 846, 1024, 1159, 1211, 1751, 1848
Cac8I	GCNNGC	3 cut(s)	171, 253, 262
CfoI	GCGC	2 cut(s)	830, 1530
Cfr10I	RCCGGY	1 cut(s)	193
Cfr13I	GGNCC	2 cut(s)	790, 1483
CseI	GACGC	2 cut(s)	76, 1933
Csp6I	GTAC	5 cut(s)	20, 208, 513, 751, 1219
CspAI	ACCGGT	1 cut(s)	193
CspCI	CAANNNNNGTGG	2 cut(s)	1317, 1352
CviAII	CATG	9 cut(s)	142, 151, 740, 814, 863, 1223, 1761, 1855, 1918
CviQI	GTAC	5 cut(s)	20, 208, 513, 751, 1219
DdeI	CTNAG	6 cut(s)	339, 612, 653, 831, 1418, 1523
DpnI	GATC	8 cut(s)	53, 315, 468, 480, 812, 1203, 1467, 1604
DpnII	GATC	8 cut(s)	51, 313, 466, 478, 810, 1201, 1465, 1602
DraI	TTTAAA	1 cut(s)	1506
EaeI	YGGCCR	5 cut(s)	147, 219, 783, 1325, 1635
EagI	CGGCCG	1 cut(s)	219
Eam1104I	CTCTTC	4 cut(s)	434, 641, 944, 974
EarI	CTCTTC	4 cut(s)	434, 641, 944, 974
EclXI	CGGCCG	1 cut(s)	219
Eco130I	CCWWGG	2 cut(s)	150, 786
Eco47I	GGWCC	1 cut(s)	1483
Eco52I	CGGCCG	1 cut(s)	219
Eco57I	CTGAAG	3 cut(s)	164, 1818, 1920
Eco88I	CYCGRG	1 cut(s)	905
Eco91I	GGTNACC	1 cut(s)	34
EcoO109I	RGGNCCY	1 cut(s)	1483
EcoO65I	GGTNACC	1 cut(s)	34
EcoRII	CCWGG	2 cut(s)	622, 1180
EcoT14I	CCWWGG	2 cut(s)	150, 786
ErhI	CCWWGG	2 cut(s)	150, 786
Esp3I	CGTCTC	1 cut(s)	1951
FaeI	CATG	9 cut(s)	145, 154, 743, 817, 866, 1226, 1764, 1858, 1921
FalI	AAGNNNNNCTT	2 cut(s)	582, 614
FaqI	GGGAC	2 cut(s)	1335, 1496
FatI	CATG	9 cut(s)	141, 150, 739, 813, 862, 1222, 1760, 1854, 1917
FbaI	TGATCA	1 cut(s)	1201
Fnu4HI	GCNGC	2 cut(s)	1590, 1749
FokI	GGATG	3 cut(s)	91, 974, 1678
Fsp4HI	GCNGC	2 cut(s)	1590, 1749
FspBI	CTAG	3 cut(s)	272, 471, 1080
GlaI	GCGC	2 cut(s)	829, 1529
GluI	GCNGC	2 cut(s)	1590, 1749
GsuI	CTGGAG	1 cut(s)	1381
HaeII	RGCGCY	1 cut(s)	1531
HaeIII	GGCC	8 cut(s)	131, 149, 221, 785, 792, 886, 1327, 1637
HgaI	GACGC	2 cut(s)	76, 1933
HhaI	GCGC	2 cut(s)	830, 1530
Hin1I	GRCGYC	2 cut(s)	87, 1944
Hin1II	CATG	9 cut(s)	145, 154, 743, 817, 866, 1226, 1764, 1858, 1921
Hin6I	GCGC	2 cut(s)	828, 1528
HinP1I	GCGC	2 cut(s)	828, 1528
HincII	GTYRAC	1 cut(s)	268
HindII	GTYRAC	1 cut(s)	268
HphI	GGTGA	5 cut(s)	28, 988, 1049, 1196, 1352
Hpy166II	GTNNAC	4 cut(s)	268, 751, 779, 1259
Hpy188I	TCNGA	7 cut(s)	313, 693, 931, 1524, 1541, 1649, 1674
Hpy188III	TCNNGA	4 cut(s)	803, 905, 1398, 1705
Hpy8I	GTNNAC	4 cut(s)	268, 751, 779, 1259
Hpy99I	CGWCG	2 cut(s)	92, 1493
HpyAV	CCTTC	9 cut(s)	109, 121, 387, 429, 622, 964, 1074, 1467, 1746
HpyCH4III	ACNGT	5 cut(s)	40, 758, 1597, 1815, 1852
HpyCH4V	TGCA	6 cut(s)	255, 495, 1017, 1070, 1441, 1751
HpyF10VI	GCNNNNNNNGC	7 cut(s)	175, 257, 261, 848, 857, 1312, 1748
HpyF3I	CTNAG	6 cut(s)	339, 612, 653, 831, 1418, 1523
Hsp92I	GRCGYC	2 cut(s)	87, 1944
Hsp92II	CATG	9 cut(s)	145, 154, 743, 817, 866, 1226, 1764, 1858, 1921
HspAI	GCGC	2 cut(s)	828, 1528
KpnI	GGTACC	1 cut(s)	211
Ksp22I	TGATCA	1 cut(s)	1201
Kzo9I	GATC	8 cut(s)	51, 313, 466, 478, 810, 1201, 1465, 1602
LmnI	GCTCC	1 cut(s)	1747
Lsp1109I	GCAGC	1 cut(s)	1735
LweI	GCATC	2 cut(s)	303, 1782
MaeI	CTAG	3 cut(s)	272, 471, 1080
MaeIII	GTNAC	4 cut(s)	34, 571, 675, 1340
MalI	GATC	8 cut(s)	53, 315, 468, 480, 812, 1203, 1467, 1604
MboI	GATC	8 cut(s)	51, 313, 466, 478, 810, 1201, 1465, 1602
MflI	RGATCY	2 cut(s)	51, 1602
MlsI	TGGCCA	2 cut(s)	785, 1637
MluNI	TGGCCA	2 cut(s)	785, 1637
MlyI	GAGTC	4 cut(s)	604, 1388, 1523, 1940
MmeI	TCCRAC	2 cut(s)	1652, 1672
Mox20I	TGGCCA	2 cut(s)	785, 1637
MscI	TGGCCA	2 cut(s)	785, 1637
MseI	TTAA	8 cut(s)	243, 360, 458, 600, 957, 1431, 1505, 1821
MslI	CAYNNNNRTG	1 cut(s)	1853
Msp20I	TGGCCA	2 cut(s)	785, 1637
MspR9I	CCNGG	6 cut(s)	59, 223, 624, 888, 1127, 1182
Mva1269I	GAATGC	1 cut(s)	1070
MvaI	CCWGG	2 cut(s)	624, 1182
MwoI	GCNNNNNNNGC	7 cut(s)	175, 257, 261, 848, 857, 1312, 1748
NciI	CCSGG	4 cut(s)	59, 223, 888, 1127
NcoI	CCATGG	1 cut(s)	150
NdeII	GATC	8 cut(s)	51, 313, 466, 478, 810, 1201, 1465, 1602
NlaIII	CATG	9 cut(s)	145, 154, 743, 817, 866, 1226, 1764, 1858, 1921
NlaIV	GGNNCC	5 cut(s)	45, 209, 345, 892, 1484
NmeAIII	GCCGAG	1 cut(s)	30
NmuCI	GTSAC	2 cut(s)	34, 1340
NspI	RCATGY	3 cut(s)	145, 743, 866
NspV	TTCGAA	3 cut(s)	288, 685, 1787
PaeR7I	CTCGAG	1 cut(s)	905
PciI	ACATGT	1 cut(s)	141
PctI	GAATGC	1 cut(s)	1070
PfeI	GAWTC	7 cut(s)	28, 335, 500, 682, 1045, 1143, 1519
PflFI	GACNNNGTC	1 cut(s)	1487
PflMI	CCANNNNNTGG	1 cut(s)	156
PinAI	ACCGGT	1 cut(s)	193
PkrI	GCNGC	2 cut(s)	1591, 1750
PleI	GAGTC	4 cut(s)	603, 1388, 1522, 1939
PpsI	GAGTC	4 cut(s)	603, 1388, 1522, 1939
PpuMI	RGGWCCY	1 cut(s)	1483
PscI	ACATGT	1 cut(s)	141
PshBI	ATTAAT	2 cut(s)	360, 1821
Psp5II	RGGWCCY	1 cut(s)	1483
Psp6I	CCWGG	2 cut(s)	622, 1180
PspEI	GGTNACC	1 cut(s)	34
PspGI	CCWGG	2 cut(s)	622, 1180
PspN4I	GGNNCC	5 cut(s)	45, 209, 345, 892, 1484
PspPI	GGNCC	2 cut(s)	790, 1483
PspPPI	RGGWCCY	1 cut(s)	1483
PsuI	RGATCY	2 cut(s)	51, 1602
PsyI	GACNNNGTC	1 cut(s)	1487
RsaI	GTAC	5 cut(s)	21, 209, 514, 752, 1220
RsaNI	GTAC	5 cut(s)	20, 208, 513, 751, 1219
RseI	CAYNNNNRTG	1 cut(s)	1853
SaqAI	TTAA	8 cut(s)	243, 360, 458, 600, 957, 1431, 1505, 1821
SatI	GCNGC	2 cut(s)	1590, 1749
Sau3AI	GATC	8 cut(s)	51, 313, 466, 478, 810, 1201, 1465, 1602
Sau96I	GGNCC	2 cut(s)	790, 1483
SchI	GAGTC	4 cut(s)	604, 1388, 1523, 1940
ScrFI	CCNGG	6 cut(s)	59, 223, 624, 888, 1127, 1182
SfaNI	GCATC	2 cut(s)	303, 1782
Sfr274I	CTCGAG	1 cut(s)	905
SfuI	TTCGAA	3 cut(s)	288, 685, 1787
SinI	GGWCC	1 cut(s)	1483
SlaI	CTCGAG	1 cut(s)	905
SmiMI	CAYNNNNRTG	1 cut(s)	1853
SmlI	CTYRAG	3 cut(s)	905, 1234, 1703
SmoI	CTYRAG	3 cut(s)	905, 1234, 1703
SsiI	CCGC	3 cut(s)	638, 768, 1589
SspI	AATATT	1 cut(s)	1294
SspMI	CTAG	3 cut(s)	272, 471, 1080
StyD4I	CCNGG	6 cut(s)	57, 221, 622, 886, 1125, 1180
StyI	CCWWGG	2 cut(s)	150, 786
TaaI	ACNGT	5 cut(s)	40, 758, 1597, 1815, 1852
TaqI	TCGA	8 cut(s)	198, 288, 685, 906, 1491, 1517, 1775, 1787
TatI	WGTACW	2 cut(s)	512, 750
TauI	GCSGC	1 cut(s)	1592
TfiI	GAWTC	7 cut(s)	28, 335, 500, 682, 1045, 1143, 1519
Tru1I	TTAA	8 cut(s)	243, 360, 458, 600, 957, 1431, 1505, 1821
Tru9I	TTAA	8 cut(s)	243, 360, 458, 600, 957, 1431, 1505, 1821
TscAI	CASTG	8 cut(s)	286, 786, 853, 1024, 1159, 1211, 1758, 1855
TseFI	GTSAC	2 cut(s)	34, 1340
TseI	GCWGC	1 cut(s)	1748
Tsp45I	GTSAC	2 cut(s)	34, 1340
TspDTI	ATGAA	4 cut(s)	95, 962, 1260, 1697
TspRI	CASTG	8 cut(s)	286, 786, 853, 1024, 1159, 1211, 1758, 1855
Tth111I	GACNNNGTC	1 cut(s)	1487
Van91I	CCANNNNNTGG	1 cut(s)	156
VpaK11BI	GGWCC	1 cut(s)	1483
VspI	ATTAAT	2 cut(s)	360, 1821
XapI	RAATTY	3 cut(s)	161, 1534, 1865
XceI	RCATGY	3 cut(s)	145, 743, 866
XhoI	CTCGAG	1 cut(s)	905
XspI	CTAG	3 cut(s)	272, 471, 1080

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.