Rh6CG500700

Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
66432895 .. 66434832
1938 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG500700.1

Sequence Viewer

Length: 1584 bp
ATGAAGAAGAAGAAGAAGAACGACTCTGTTCCTCCCCCTCTCATTGTGAAACCCCGATTATGCCCCGAAGCAATTCTCGAATGGTCCAACACCACCGGCAAGATCAGCCGCTCCGATTTGACCGAAAAGGCCAGAGCTCACCTCTCCGCATTGGGCTGGAAATTTTGGTACAAAAACAAGTCCAACAACAGGATGGAGTTGCGCTACGAATCTCCCACCGGAAAAGTCTTCTACTCTCTCCGAACGGCCTGCAAGGCCTGCGTTGAAGAAGAAGGACTGTCCCAGATTGTTAAGCACACCACCCTAAAACCTAAGGACATCCTGCCTGTTGTTGACGCCGGTGACTCGGCAGTAGTACTAGTACCTCCTCCTGAAAAGCCCAAGAGATCATCAAAGAGGAAGAAGCTTGATGCAATAGGGGAGCCGGTTCGGAATCCGAAACCGAAAAGAGGCAAGGTTCTTGCGGATTTGAAGAGAGTTAGAGATGAAAAGGAGAGGAATAGGGATGTCAAGATGAGGTCAAGCGATGATGAGAACCATGATGAGTGCAGTGTGTGTTGCTATGGAGGGGAATTGGTTCTCTGTGATGGGTGTCCCTCTGCTTTTCATGCTGGCTGCATTGGTTTGGGTGAGGTGGGAGATGGTGATTGGTTCTGCCCATCTTGCTGCTGTGGGTTTTGCAGCTTGGGAATATTGGAGGATGATGGTGTTGCCTCATGTGACCAATGCAGGCAGAGGTACCACATTGGGTGTGCAAGAAATTCAGGGGAGGCTAAATTGGGTGTGGATGGGAAATTGTTTTGCAGTAGGAGATGTGAAAATGTGTGTTTGGGAATCAACAAGATTTTGGGGAAGGCTATTGTGGTTGGTCCTGATAATCTTACTTGGACTTTGCTTAAGTCCTCCTCAACTTGTGATGTGGACAACTTGACCAGGAATTACAGACAGCACAAATTGGCTGTGGAGGTGATGCATGAGTGTTTTGAGCCGACTCAGGACCCCTACACGAGAAGTGATGTGGTTGATGATGTGATTTTTAATAGGCAGAAGAAGTTTCGAGGGTTTTATACTGCGGTTTTGGAGAGGAATGAGGAGGTGATTAGCGCAGCTACGGTGAGGGTTTACAGTGAGCTGGGGGAAGTGCCACTAGTGGCGACTAAGTTTAAGCACCGGAGACTTGGGATGTGTCGGATTTTGATGAGTGAGCTTGAGAAACAGCTTGTGAAGTTGGGAATTGGGAAGCTGGTTTTGCCTTCTGCTAAAGATGCACTGGAGGCATGGACTAGTACCTCACTTGGCTTTTCGAAGATGACTGCTGACGAAGCATTACCATTGTTGAAGTATAGATTCTGGAATTTCCAAGACACTACCATGTGTCACAAGGTATTGAAGAAACAGACGACTAGTGCTGAATCTGATGGGTCTGCTGGTGCCATTTATACAGTAACGCAAGTAGGGGACATTGATGCAAGTGAAGAGGCTTGCATTATGGATATTGATTATGATTATGATTTCATGTTGGAGGATGACTGTAAATTCTTGTCATGGTACAAATCTGGATCTAAAAAGATTGTGGCTCTCTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

527

Amino Acids

58.94

Weight (kDa)

8.42

Isoelectric Point (pI)

43.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7028 PF22970 15 - 91 1.3e-27 Domain of unknown function (DUF7028)
PHD PF00628 183 - 222 3.2e-06 PHD-finger
IDM1_C PF23209 328 - 461 2.5e-40 Increased DNA methylation 1, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 738
AccB1I GGYRCC 2 cut(s) 738, 1430
AccBSI CCGCTC 1 cut(s) 111
AciI CCGC 4 cut(s) 109, 147, 464, 1073
AclWI GGATC 1 cut(s) 1567
AcsI RAATTY 4 cut(s) 161, 760, 1354, 1535
AcyI GRCGYC 1 cut(s) 336
AfaI GTAC 6 cut(s) 170, 357, 363, 740, 1288, 1550
AfiI CCNNNNNNNGG 2 cut(s) 189, 449
AflII CTTAAG 1 cut(s) 896
AgsI TTSAA 4 cut(s) 266, 472, 1339, 1390
AhlI ACTAGT 4 cut(s) 358, 1147, 1283, 1403
AjnI CCWGG 1 cut(s) 932
AluBI AGCT 8 cut(s) 137, 406, 684, 1109, 1132, 1207, 1219, 1243
AluI AGCT 8 cut(s) 137, 406, 684, 1109, 1132, 1207, 1219, 1243
Alw21I GWGCWC 1 cut(s) 139
Alw26I GTCTC 1 cut(s) 1168
AlwI GGATC 1 cut(s) 1567
AoxI GGCC 3 cut(s) 129, 246, 255
ApeKI GCWGC 4 cut(s) 615, 666, 681, 1106
ApoI RAATTY 4 cut(s) 161, 760, 1354, 1535
Asp700I GAANNNNTTC 2 cut(s) 72, 576
Asp718I GGTACC 1 cut(s) 738
AspLEI GCGC 2 cut(s) 204, 1106
AspS9I GGNCC 3 cut(s) 84, 869, 997
AsuHPI GGTGA 7 cut(s) 131, 353, 641, 656, 979, 1108, 1126
AsuII TTCGAA 1 cut(s) 1304
AvaII GGWCC 3 cut(s) 84, 869, 997
AxyI CCTNAGG 1 cut(s) 312
BanI GGYRCC 2 cut(s) 738, 1430
BanII GRGCYC 1 cut(s) 139
BauI CACGAG 1 cut(s) 1006
BbsI GAAGAC 1 cut(s) 220
Bbv12I GWGCWC 1 cut(s) 139
BbvI GCAGC 4 cut(s) 602, 653, 693, 1118
BccI CCATC 7 cut(s) 187, 581, 635, 667, 698, 782, 1412
BceAI ACGGC 1 cut(s) 261
BcgI CGANNNNNNTGC 2 cut(s) 231, 265
BciT130I CCWGG 1 cut(s) 934
BcoDI GTCTC 1 cut(s) 1168
BcuI ACTAGT 4 cut(s) 358, 1147, 1283, 1403
BfaI CTAG 4 cut(s) 359, 1148, 1284, 1404
BfrI CTTAAG 1 cut(s) 896
BglI GCCNNNNNGGC 1 cut(s) 254
BisI GCNGC 5 cut(s) 109, 616, 667, 682, 1107
BlsI GCNGC 5 cut(s) 110, 617, 668, 683, 1108
BmcAI AGTACT 1 cut(s) 357
Bme1390I CCNGG 1 cut(s) 934
Bme18I GGWCC 3 cut(s) 84, 869, 997
BmgT120I GGNCC 3 cut(s) 84, 869, 997
BmiI GGNNCC 4 cut(s) 423, 740, 999, 1432
BmrFI CCNGG 1 cut(s) 934
BmsI GCATC 4 cut(s) 400, 960, 1255, 1456
BpiI GAAGAC 1 cut(s) 220
BplI GAGNNNNNCTC 2 cut(s) 126, 158
BpmI CTGGAG 1 cut(s) 1292
Bpu14I TTCGAA 1 cut(s) 1304
BpuEI CTTGAG 1 cut(s) 1229
BsaHI GRCGYC 1 cut(s) 336
BsaWI WCCGGW 2 cut(s) 218, 1170
Bsc4I CCNNNNNNNGG 2 cut(s) 189, 449
Bse118I RCCGGY 3 cut(s) 95, 338, 424
Bse1I ACTGG 1 cut(s) 1275
Bse21I CCTNAGG 1 cut(s) 312
BseBI CCWGG 1 cut(s) 934
BseGI GGATG 7 cut(s) 198, 318, 511, 706, 793, 1188, 1531
BseLI CCNNNNNNNGG 2 cut(s) 189, 449
BseMII CTCAG 1 cut(s) 1007
BseNI ACTGG 1 cut(s) 1275
BseRI GAGGAG 3 cut(s) 357, 895, 1106
BseXI GCAGC 4 cut(s) 602, 653, 693, 1118
BseYI CCCAGC 1 cut(s) 1132
BsgI GTGCAG 1 cut(s) 568
BshFI GGCC 3 cut(s) 131, 248, 257
BshNI GGYRCC 2 cut(s) 738, 1430
BsiHKAI GWGCWC 1 cut(s) 139
BsiSI CCGG 5 cut(s) 96, 219, 339, 425, 1171
BslFI GGGAC 3 cut(s) 265, 579, 1472
BslI CCNNNNNNNGG 2 cut(s) 189, 449
BsmAI GTCTC 1 cut(s) 1168
BsmFI GGGAC 3 cut(s) 265, 579, 1472
BsnI GGCC 3 cut(s) 131, 248, 257
Bsp119I TTCGAA 1 cut(s) 1304
Bsp1286I GDGCHC 1 cut(s) 139
Bsp143I GATC 3 cut(s) 102, 386, 1559
BspACI CCGC 4 cut(s) 109, 147, 464, 1073
BspANI GGCC 3 cut(s) 131, 248, 257
BspCNI CTCAG 1 cut(s) 1006
BspLI GGNNCC 4 cut(s) 423, 740, 999, 1432
BspPI GGATC 1 cut(s) 1567
BspT104I TTCGAA 1 cut(s) 1304
BspT107I GGYRCC 2 cut(s) 738, 1430
BspTI CTTAAG 1 cut(s) 896
BsrBI CCGCTC 1 cut(s) 111
BsrFI RCCGGY 3 cut(s) 95, 338, 424
BsrI ACTGG 1 cut(s) 1275
BssAI RCCGGY 3 cut(s) 95, 338, 424
BssMI GATC 3 cut(s) 102, 386, 1559
BssNI GRCGYC 1 cut(s) 336
BssSI CACGAG 1 cut(s) 1006
Bst2BI CACGAG 1 cut(s) 1006
Bst2UI CCWGG 1 cut(s) 934
Bst4CI ACNGT 5 cut(s) 279, 1114, 1127, 1444, 1532
Bst6I CTCTTC 2 cut(s) 467, 1470
BstACI GRCGYC 1 cut(s) 336
BstAFI CTTAAG 1 cut(s) 896
BstAPI GCANNNNNTGC 1 cut(s) 258
BstBI TTCGAA 1 cut(s) 1304
BstC8I GCNNGC 5 cut(s) 250, 259, 613, 731, 1483
BstDEI CTNAG 3 cut(s) 312, 993, 1158
BstF5I GGATG 7 cut(s) 198, 318, 511, 706, 793, 1188, 1531
BstHHI GCGC 2 cut(s) 204, 1106
BstKTI GATC 3 cut(s) 105, 389, 1562
BstMAI GTCTC 1 cut(s) 1168
BstMBI GATC 3 cut(s) 102, 386, 1559
BstMWI GCNNNNNNNGC 9 cut(s) 105, 254, 258, 608, 663, 1249, 1265, 1274, 1322
BstNI CCWGG 1 cut(s) 934
BstSCI CCNGG 1 cut(s) 932
BstV1I GCAGC 4 cut(s) 602, 653, 693, 1118
BstV2I GAAGAC 1 cut(s) 220
BstX2I RGATCY 1 cut(s) 1559
BstYI RGATCY 1 cut(s) 1559
Bsu36I CCTNAGG 1 cut(s) 312
BsuRI GGCC 3 cut(s) 131, 248, 257
BtgZI GCGATG 1 cut(s) 540
BtsCI GGATG 7 cut(s) 198, 318, 511, 706, 793, 1188, 1531
BtsI GCAGTG 1 cut(s) 556
BtsIMutI CAGTG 3 cut(s) 556, 1132, 1268
Cac8I GCNNGC 5 cut(s) 250, 259, 613, 731, 1483
CfoI GCGC 2 cut(s) 204, 1106
Cfr10I RCCGGY 3 cut(s) 95, 338, 424
Cfr13I GGNCC 3 cut(s) 84, 869, 997
CseI GACGC 1 cut(s) 344
Csp6I GTAC 6 cut(s) 169, 356, 362, 739, 1287, 1549
CviAII CATG 8 cut(s) 539, 608, 717, 974, 1278, 1372, 1516, 1545
CviQI GTAC 6 cut(s) 169, 356, 362, 739, 1287, 1549
DdeI CTNAG 3 cut(s) 312, 993, 1158
DpnI GATC 3 cut(s) 104, 388, 1561
DpnII GATC 3 cut(s) 102, 386, 1559
Eam1104I CTCTTC 2 cut(s) 467, 1470
EarI CTCTTC 2 cut(s) 467, 1470
Ecl136II GAGCTC 1 cut(s) 137
Eco147I AGGCCT 1 cut(s) 257
Eco24I GRGCYC 1 cut(s) 139
Eco47I GGWCC 3 cut(s) 84, 869, 997
Eco53kI GAGCTC 1 cut(s) 137
Eco81I CCTNAGG 1 cut(s) 312
EcoICRI GAGCTC 1 cut(s) 137
EcoO109I RGGNCCY 1 cut(s) 997
EcoRII CCWGG 1 cut(s) 932
EcoT22I ATGCAT 1 cut(s) 975
EcoT38I GRGCYC 1 cut(s) 139
FaeI CATG 8 cut(s) 542, 611, 720, 977, 1281, 1375, 1519, 1548
FaqI GGGAC 3 cut(s) 265, 579, 1472
FatI CATG 8 cut(s) 538, 607, 716, 973, 1277, 1371, 1515, 1544
Fnu4HI GCNGC 5 cut(s) 109, 616, 667, 682, 1107
FokI GGATG 7 cut(s) 205, 305, 518, 713, 800, 1195, 1538
FriOI GRGCYC 1 cut(s) 139
Fsp4HI GCNGC 5 cut(s) 109, 616, 667, 682, 1107
FspBI CTAG 4 cut(s) 359, 1148, 1284, 1404
GlaI GCGC 2 cut(s) 203, 1105
GluI GCNGC 5 cut(s) 109, 616, 667, 682, 1107
GsaI CCCAGC 1 cut(s) 1136
GsuI CTGGAG 1 cut(s) 1292
HaeIII GGCC 3 cut(s) 131, 248, 257
HapII CCGG 5 cut(s) 96, 219, 339, 425, 1171
HgaI GACGC 1 cut(s) 344
HhaI GCGC 2 cut(s) 204, 1106
Hin1I GRCGYC 1 cut(s) 336
Hin1II CATG 8 cut(s) 542, 611, 720, 977, 1281, 1375, 1519, 1548
Hin6I GCGC 2 cut(s) 202, 1104
HinP1I GCGC 2 cut(s) 202, 1104
HincII GTYRAC 1 cut(s) 334
HindII GTYRAC 1 cut(s) 334
HindIII AAGCTT 1 cut(s) 404
HinfI GANTC 8 cut(s) 23, 209, 344, 433, 834, 991, 1347, 1412
HpaII CCGG 5 cut(s) 96, 219, 339, 425, 1171
HphI GGTGA 7 cut(s) 131, 353, 641, 656, 979, 1108, 1126
Hpy166II GTNNAC 3 cut(s) 334, 922, 1123
Hpy188I TCNGA 6 cut(s) 115, 242, 432, 438, 1191, 1417
Hpy188III TCNNGA 7 cut(s) 77, 371, 511, 872, 995, 1351, 1557
Hpy8I GTNNAC 3 cut(s) 334, 922, 1123
HpyAV CCTTC 3 cut(s) 266, 847, 1263
HpyCH4III ACNGT 5 cut(s) 279, 1114, 1127, 1444, 1532
HpyF10VI GCNNNNNNNGC 9 cut(s) 105, 254, 258, 608, 663, 1249, 1265, 1274, 1322
HpyF3I CTNAG 3 cut(s) 312, 993, 1158
Hsp92I GRCGYC 1 cut(s) 336
Hsp92II CATG 8 cut(s) 542, 611, 720, 977, 1281, 1375, 1519, 1548
HspAI GCGC 2 cut(s) 202, 1104
KpnI GGTACC 1 cut(s) 742
Kzo9I GATC 3 cut(s) 102, 386, 1559
LmnI GCTCC 2 cut(s) 116, 421
Lsp1109I GCAGC 4 cut(s) 602, 653, 693, 1118
LweI GCATC 4 cut(s) 400, 960, 1255, 1456
MaeI CTAG 4 cut(s) 359, 1148, 1284, 1404
MaeIII GTNAC 4 cut(s) 341, 719, 1376, 1444
MalI GATC 3 cut(s) 104, 388, 1561
MbiI CCGCTC 1 cut(s) 111
MboI GATC 3 cut(s) 102, 386, 1559
MflI RGATCY 1 cut(s) 1559
MhlI GDGCHC 1 cut(s) 139
MlyI GAGTC 3 cut(s) 17, 338, 985
MmeI TCCRAC 4 cut(s) 111, 207, 1169, 1500
Mph1103I ATGCAT 1 cut(s) 975
MroXI GAANNNNTTC 2 cut(s) 72, 576
MseI TTAA 4 cut(s) 291, 897, 1038, 1164
MslI CAYNNNNRTG 1 cut(s) 1370
MspCI CTTAAG 1 cut(s) 896
MspI CCGG 5 cut(s) 96, 219, 339, 425, 1171
MspR9I CCNGG 1 cut(s) 934
MvaI CCWGG 1 cut(s) 934
MwoI GCNNNNNNNGC 9 cut(s) 105, 254, 258, 608, 663, 1249, 1265, 1274, 1322
NdeII GATC 3 cut(s) 102, 386, 1559
NlaIII CATG 8 cut(s) 542, 611, 720, 977, 1281, 1375, 1519, 1548
NlaIV GGNNCC 4 cut(s) 423, 740, 999, 1432
NmeAIII GCCGAG 1 cut(s) 326
NmuCI GTSAC 3 cut(s) 341, 719, 1376
NsiI ATGCAT 1 cut(s) 975
NspV TTCGAA 1 cut(s) 1304
PceI AGGCCT 1 cut(s) 257
PdmI GAANNNNTTC 2 cut(s) 72, 576
PfeI GAWTC 5 cut(s) 209, 433, 834, 1347, 1412
PkrI GCNGC 5 cut(s) 110, 617, 668, 683, 1108
PleI GAGTC 3 cut(s) 17, 338, 985
PpsI GAGTC 3 cut(s) 17, 338, 985
PpuMI RGGWCCY 1 cut(s) 997
Psp124BI GAGCTC 1 cut(s) 139
Psp5II RGGWCCY 1 cut(s) 997
Psp6I CCWGG 1 cut(s) 932
PspFI CCCAGC 1 cut(s) 1132
PspGI CCWGG 1 cut(s) 932
PspN4I GGNNCC 4 cut(s) 423, 740, 999, 1432
PspPI GGNCC 3 cut(s) 84, 869, 997
PspPPI RGGWCCY 1 cut(s) 997
PsuI RGATCY 1 cut(s) 1559
RsaI GTAC 6 cut(s) 170, 357, 363, 740, 1288, 1550
RsaNI GTAC 6 cut(s) 169, 356, 362, 739, 1287, 1549
RseI CAYNNNNRTG 1 cut(s) 1370
SacI GAGCTC 1 cut(s) 139
SaqAI TTAA 4 cut(s) 291, 897, 1038, 1164
SatI GCNGC 5 cut(s) 109, 616, 667, 682, 1107
Sau3AI GATC 3 cut(s) 102, 386, 1559
Sau96I GGNCC 3 cut(s) 84, 869, 997
ScaI AGTACT 1 cut(s) 357
SchI GAGTC 3 cut(s) 17, 338, 985
ScrFI CCNGG 1 cut(s) 934
SduI GDGCHC 1 cut(s) 139
SfaNI GCATC 4 cut(s) 400, 960, 1255, 1456
SfiI GGCCNNNNNGGCC 1 cut(s) 254
SfuI TTCGAA 1 cut(s) 1304
SgrAI CRCCGGYG 1 cut(s) 338
SinI GGWCC 3 cut(s) 84, 869, 997
SmiMI CAYNNNNRTG 1 cut(s) 1370
SmlI CTYRAG 2 cut(s) 896, 1208
SmoI CTYRAG 2 cut(s) 896, 1208
SpeI ACTAGT 4 cut(s) 358, 1147, 1283, 1403
SseBI AGGCCT 1 cut(s) 257
SsiI CCGC 4 cut(s) 109, 147, 464, 1073
SspI AATATT 1 cut(s) 693
SspMI CTAG 4 cut(s) 359, 1148, 1284, 1404
SstI GAGCTC 1 cut(s) 139
StuI AGGCCT 1 cut(s) 257
StyD4I CCNGG 1 cut(s) 932
TaaI ACNGT 5 cut(s) 279, 1114, 1127, 1444, 1532
TaqI TCGA 3 cut(s) 78, 1057, 1304
TaqII GACCGA 1 cut(s) 137
TatI WGTACW 1 cut(s) 355
TauI GCSGC 1 cut(s) 111
TfiI GAWTC 5 cut(s) 209, 433, 834, 1347, 1412
Tru1I TTAA 4 cut(s) 291, 897, 1038, 1164
Tru9I TTAA 4 cut(s) 291, 897, 1038, 1164
TscAI CASTG 3 cut(s) 556, 1132, 1275
TseFI GTSAC 3 cut(s) 341, 719, 1376
TseI GCWGC 4 cut(s) 615, 666, 681, 1106
Tsp45I GTSAC 3 cut(s) 341, 719, 1376
TspDTI ATGAA 4 cut(s) 17, 501, 596, 1504
TspRI CASTG 3 cut(s) 556, 1132, 1275
Vha464I CTTAAG 1 cut(s) 896
VpaK11BI GGWCC 3 cut(s) 84, 869, 997
XapI RAATTY 4 cut(s) 161, 760, 1354, 1535
XcmI CCANNNNNNNNNTGG 1 cut(s) 190
XmnI GAANNNNTTC 2 cut(s) 72, 576
XspI CTAG 4 cut(s) 359, 1148, 1284, 1404
ZrmI AGTACT 1 cut(s) 357
Zsp2I ATGCAT 1 cut(s) 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.