Rh6BG204300

Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0003679
Physical Location & Seq
Forward (+)
38470858 .. 38473602
2745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG204300.1

Sequence Viewer

Length: 1293 bp
ATGGTGACTGCCCTCGTCGATGGCCGGAGTGGAGCGCCTCCCCCAGCCTCTAGAAGCTTCCAGGAAGAGCCTCACTTCGCTGGAGGTCATCTCAAACTCCATTTCAATGCGCTTGTCCTCGCCGTCGTCGAGCTGTTGGGTGATGCCAAGCTGCCCGTTCGCGACACCGCCCGGAGGCTCCTCCTACTCTTATGGAGGTTCGATCTTATGCCTGGGCACACAAAAGTTGGAGAGTTAGCTAGACAGGAGTTTCCAACAACTGTCACCTCAGCAATTGGACTTTTTGCATCAACCGAACTTCCTCTTCAGCTTGCTATACTTCCTCCGGTTGGGATTGGACTTGTTGATGTGAATCTGACTTTTATACTCATTCCAATTCCCAGGAGATGTATACGCAGGCAGCTAGGGACTCCGTTCCGTGATGAACTGAATTCAGCGGCACCATCTTCCCATGTCCATGCACTACAAATATTGTTACTGATTGATTTTCTCTTCCGGAAGTTATATGATGCTAGTTGCTCATTGGGTTCTATTCAACTTGCAATGCAGGAGCAGGATATTAATGCAAGGCTAGAGAGTATTGAACCTAAGAATCGCTCGTCAGATGGACTTACTTCTGTAGAAACAAAGCCCTTGAGCCATAACCCAAAGAGGAATAGTCCGGAGGCTAAGAGTTCCTCAAGGGAGGTGTCATCTCTATTTAGAGTTGCTCAGGACACCCAGCTGCCTATTGTTGACGCCGGTGACTTGGCAGTAGTACTAGTACCTCTACCTCCTCCTGAAATGCCCAATCCGAAACCGAAAAGAGGCAAGCTTCTTGCGGATTTGAAGAGCGTGAGAGATGAAAAGGAGAGAAATAAGGATGTCAGGATGAGGTCAAGTGATGATAACAACCACGATGAGTGCAGTGTGTGTTGCTATGGAGGGGAATTGGTTCTCTGTGATGGATGTCCCTCTGCTTTTCACGCAGGCTGCATTGGTTTGGGTGAGGTGGGAGATGGTGATTGGTTCTGCCCATCTTGCTGCTGTGGGTTTTGCAGCCTGGGAATATTGGAGGATGATGGTGTTGCCTCATGTGACCAATGCAGGCAGAGGTACCACATTGGGTGTGCAAGAAATTCATGGCAGGCTAAATTGGGTGTGGATGGAAAGTTGTTTTGCAGTAGGAAATGTGAAAATGTGTGTTTAGGGATCAACAAGATTTTGGGGAAGGCTATTGTGGTTGTTCCTGACAATCTTATTACTTGGAATTTGCTCAAGTCATCCTCTACTTGTGATGTGGACAACTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004407 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0008270 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0015630 GO:0016043 GO:0016462 GO:0016569 GO:0016570 GO:0016575 GO:0016581 GO:0016787 GO:0016810 GO:0016811 GO:0016817 GO:0016818 GO:0016887 GO:0017053 GO:0017111 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0042623 GO:0042826 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0070491 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090545 GO:0090568 GO:0097159 GO:0098732 GO:0140096 GO:0140097 GO:1901363 GO:1901564 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Acetyltransf_10 Agenet Jas PHD

Protein Analysis

430

Amino Acids

46.88

Weight (kDa)

6.38

Isoelectric Point (pI)

50.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD PF00628 302 - 341 2.5e-06 PHD-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1095
AccB1I GGYRCC 2 cut(s) 439, 1095
AccI GTMKAC 1 cut(s) 391
AccII CGCG 1 cut(s) 162
AccIII TCCGGA 2 cut(s) 495, 661
AciI CCGC 3 cut(s) 168, 437, 821
AclWI GGATC 1 cut(s) 1199
AcoI YGGCCR 1 cut(s) 22
AcsI RAATTY 3 cut(s) 430, 1117, 1249
AcuI CTGAAG 1 cut(s) 290
AcyI GRCGYC 1 cut(s) 738
AfaI GTAC 3 cut(s) 759, 765, 1097
AfiI CCNNNNNNNGG 3 cut(s) 174, 329, 806
AgsI TTSAA 4 cut(s) 106, 536, 584, 829
AhlI ACTAGT 1 cut(s) 760
AjnI CCWGG 4 cut(s) 60, 211, 380, 1041
AluBI AGCT 8 cut(s) 57, 133, 151, 239, 310, 403, 724, 814
AluI AGCT 8 cut(s) 57, 133, 151, 239, 310, 403, 724, 814
AlwI GGATC 1 cut(s) 1199
Aor13HI TCCGGA 2 cut(s) 495, 661
AoxI GGCC 1 cut(s) 22
ApeKI GCWGC 6 cut(s) 151, 400, 724, 972, 1023, 1038
ApoI RAATTY 3 cut(s) 430, 1117, 1249
AseI ATTAAT 1 cut(s) 561
Asp700I GAANNNNTTC 1 cut(s) 933
Asp718I GGTACC 1 cut(s) 1095
AspLEI GCGC 2 cut(s) 37, 112
AsuC2I CCSGG 1 cut(s) 172
AsuHPI GGTGA 6 cut(s) 16, 152, 256, 755, 998, 1013
BaeGI GKGCMC 1 cut(s) 219
BanI GGYRCC 2 cut(s) 439, 1095
BbvCI CCTCAGC 1 cut(s) 268
BbvI GCAGC 6 cut(s) 138, 412, 711, 959, 1010, 1050
BccI CCATC 8 cut(s) 14, 451, 599, 938, 992, 1024, 1055, 1139
BceAI ACGGC 1 cut(s) 107
BciT130I CCWGG 4 cut(s) 62, 213, 382, 1043
BcnI CCSGG 1 cut(s) 172
BcuI ACTAGT 1 cut(s) 760
BfaI CTAG 6 cut(s) 51, 240, 404, 513, 572, 761
BfmI CTRYAG 1 cut(s) 618
BfoI RGCGCY 1 cut(s) 38
BisI GCNGC 7 cut(s) 152, 401, 438, 725, 973, 1024, 1039
BlsI GCNGC 7 cut(s) 153, 402, 439, 726, 974, 1025, 1040
BmcAI AGTACT 1 cut(s) 759
Bme1390I CCNGG 5 cut(s) 62, 172, 213, 382, 1043
BmiI GGNNCC 3 cut(s) 179, 441, 1097
BmrFI CCNGG 5 cut(s) 62, 172, 213, 382, 1043
BmsI GCATC 3 cut(s) 133, 296, 499
BplI GAGNNNNNCTC 2 cut(s) 75, 107
BpmI CTGGAG 1 cut(s) 102
Bpu10I CCTNAGC 2 cut(s) 268, 711
BpuEI CTTGAG 3 cut(s) 655, 664, 1241
BpuMI CCSGG 1 cut(s) 172
BsaBI GATNNNNATC 1 cut(s) 351
BsaHI GRCGYC 1 cut(s) 738
BsaJI CCNNGG 3 cut(s) 212, 380, 1042
BsaWI WCCGGW 3 cut(s) 325, 495, 661
Bsc4I CCNNNNNNNGG 3 cut(s) 174, 329, 806
Bse118I RCCGGY 1 cut(s) 740
Bse3DI GCAATG 1 cut(s) 549
Bse8I GATNNNNATC 1 cut(s) 351
BseAI TCCGGA 2 cut(s) 495, 661
BseBI CCWGG 4 cut(s) 62, 213, 382, 1043
BseDI CCNNGG 3 cut(s) 212, 380, 1042
BseGI GGATG 6 cut(s) 868, 876, 953, 1063, 1150, 1262
BseJI GATNNNNATC 1 cut(s) 351
BseLI CCNNNNNNNGG 3 cut(s) 174, 329, 806
BseMI GCAATG 1 cut(s) 549
BseMII CTCAG 2 cut(s) 282, 725
BseRI GAGGAG 2 cut(s) 170, 765
BseSI GKGCMC 1 cut(s) 219
BseXI GCAGC 6 cut(s) 138, 412, 711, 959, 1010, 1050
BseYI CCCAGC 2 cut(s) 43, 720
BsgI GTGCAG 1 cut(s) 925
Bsh1236I CGCG 1 cut(s) 162
BshFI GGCC 1 cut(s) 24
BshNI GGYRCC 2 cut(s) 439, 1095
BsiSI CCGG 6 cut(s) 25, 172, 326, 496, 662, 741
BslFI GGGAC 2 cut(s) 421, 936
BslI CCNNNNNNNGG 3 cut(s) 174, 329, 806
BsmFI GGGAC 2 cut(s) 421, 936
BsnI GGCC 1 cut(s) 24
Bsp1286I GDGCHC 1 cut(s) 219
Bsp13I TCCGGA 2 cut(s) 495, 661
Bsp143I GATC 2 cut(s) 202, 1191
Bsp68I TCGCGA 1 cut(s) 162
BspACI CCGC 3 cut(s) 168, 437, 821
BspANI GGCC 1 cut(s) 24
BspCNI CTCAG 2 cut(s) 281, 724
BspEI TCCGGA 2 cut(s) 495, 661
BspFNI CGCG 1 cut(s) 162
BspLI GGNNCC 3 cut(s) 179, 441, 1097
BspPI GGATC 1 cut(s) 1199
BspQI GCTCTTC 2 cut(s) 60, 824
BspT107I GGYRCC 2 cut(s) 439, 1095
BsrDI GCAATG 1 cut(s) 549
BsrFI RCCGGY 1 cut(s) 740
BssAI RCCGGY 1 cut(s) 740
BssECI CCNNGG 3 cut(s) 212, 380, 1042
BssMI GATC 2 cut(s) 202, 1191
BssNAI GTATAC 1 cut(s) 392
BssNI GRCGYC 1 cut(s) 738
Bst1107I GTATAC 1 cut(s) 392
Bst2UI CCWGG 4 cut(s) 62, 213, 382, 1043
Bst4CI ACNGT 1 cut(s) 262
Bst6I CTCTTC 4 cut(s) 60, 309, 497, 824
BstACI GRCGYC 1 cut(s) 738
BstC8I GCNNGC 6 cut(s) 312, 398, 812, 970, 1088, 1128
BstDEI CTNAG 4 cut(s) 268, 588, 669, 711
BstF5I GGATG 6 cut(s) 868, 876, 953, 1063, 1150, 1262
BstFNI CGCG 1 cut(s) 162
BstH2I RGCGCY 1 cut(s) 38
BstHHI GCGC 2 cut(s) 37, 112
BstKTI GATC 2 cut(s) 205, 1194
BstMBI GATC 2 cut(s) 202, 1191
BstMWI GCNNNNNNNGC 2 cut(s) 965, 1020
BstNI CCWGG 4 cut(s) 62, 213, 382, 1043
BstSCI CCNGG 5 cut(s) 60, 170, 211, 380, 1041
BstSFI CTRYAG 1 cut(s) 618
BstSLI GKGCMC 1 cut(s) 219
BstUI CGCG 1 cut(s) 162
BstV1I GCAGC 6 cut(s) 138, 412, 711, 959, 1010, 1050
BstZ17I GTATAC 1 cut(s) 392
BsuRI GGCC 1 cut(s) 24
BtsCI GGATG 6 cut(s) 868, 876, 953, 1063, 1150, 1262
BtsI GCAGTG 1 cut(s) 913
BtsIMutI CAGTG 1 cut(s) 913
BtuMI TCGCGA 1 cut(s) 162
Cac8I GCNNGC 6 cut(s) 312, 398, 812, 970, 1088, 1128
CfoI GCGC 2 cut(s) 37, 112
Cfr10I RCCGGY 1 cut(s) 740
CseI GACGC 1 cut(s) 746
Csp6I GTAC 3 cut(s) 758, 764, 1096
CviAII CATG 4 cut(s) 452, 458, 1074, 1122
CviQI GTAC 3 cut(s) 758, 764, 1096
DdeI CTNAG 4 cut(s) 268, 588, 669, 711
DpnI GATC 2 cut(s) 204, 1193
DpnII GATC 2 cut(s) 202, 1191
EaeI YGGCCR 1 cut(s) 22
Eam1104I CTCTTC 4 cut(s) 60, 309, 497, 824
EarI CTCTTC 4 cut(s) 60, 309, 497, 824
Eco57I CTGAAG 1 cut(s) 290
EcoRI GAATTC 1 cut(s) 430
EcoRII CCWGG 4 cut(s) 60, 211, 380, 1041
FaeI CATG 4 cut(s) 455, 461, 1077, 1125
FaqI GGGAC 2 cut(s) 421, 936
FatI CATG 4 cut(s) 451, 457, 1073, 1121
FblI GTMKAC 1 cut(s) 391
Fnu4HI GCNGC 7 cut(s) 152, 401, 438, 725, 973, 1024, 1039
FokI GGATG 6 cut(s) 875, 883, 960, 1070, 1157, 1249
Fsp4HI GCNGC 7 cut(s) 152, 401, 438, 725, 973, 1024, 1039
FspBI CTAG 6 cut(s) 51, 240, 404, 513, 572, 761
GlaI GCGC 2 cut(s) 36, 111
GluI GCNGC 7 cut(s) 152, 401, 438, 725, 973, 1024, 1039
GsaI CCCAGC 2 cut(s) 47, 724
GsuI CTGGAG 1 cut(s) 102
HaeII RGCGCY 1 cut(s) 38
HaeIII GGCC 1 cut(s) 24
HapII CCGG 6 cut(s) 25, 172, 326, 496, 662, 741
HgaI GACGC 1 cut(s) 746
HhaI GCGC 2 cut(s) 37, 112
Hin1I GRCGYC 1 cut(s) 738
Hin1II CATG 4 cut(s) 455, 461, 1077, 1125
Hin6I GCGC 2 cut(s) 35, 110
HinP1I GCGC 2 cut(s) 35, 110
HincII GTYRAC 1 cut(s) 736
HindII GTYRAC 1 cut(s) 736
HindIII AAGCTT 2 cut(s) 55, 812
HinfI GANTC 3 cut(s) 352, 409, 592
HpaII CCGG 6 cut(s) 25, 172, 326, 496, 662, 741
HphI GGTGA 6 cut(s) 16, 152, 256, 755, 998, 1013
Hpy166II GTNNAC 3 cut(s) 392, 736, 1282
Hpy188I TCNGA 3 cut(s) 357, 604, 795
Hpy188III TCNNGA 8 cut(s) 51, 161, 496, 662, 713, 779, 868, 1229
Hpy8I GTNNAC 3 cut(s) 392, 736, 1282
Hpy99I CGWCG 3 cut(s) 20, 128, 131
HpyAV CCTTC 1 cut(s) 1204
HpyCH4III ACNGT 1 cut(s) 262
HpyF10VI GCNNNNNNNGC 2 cut(s) 965, 1020
HpyF3I CTNAG 4 cut(s) 268, 588, 669, 711
Hsp92I GRCGYC 1 cut(s) 738
Hsp92II CATG 4 cut(s) 455, 461, 1077, 1125
HspAI GCGC 2 cut(s) 35, 110
Kpn2I TCCGGA 2 cut(s) 495, 661
KpnI GGTACC 1 cut(s) 1099
Kzo9I GATC 2 cut(s) 202, 1191
LguI GCTCTTC 2 cut(s) 60, 824
LmnI GCTCC 3 cut(s) 32, 183, 550
Lsp1109I GCAGC 6 cut(s) 138, 412, 711, 959, 1010, 1050
LweI GCATC 3 cut(s) 133, 296, 499
MaeI CTAG 6 cut(s) 51, 240, 404, 513, 572, 761
MaeIII GTNAC 5 cut(s) 4, 262, 474, 743, 1076
MalI GATC 2 cut(s) 204, 1193
MboI GATC 2 cut(s) 202, 1191
MboII GAAGA 5 cut(s) 77, 296, 438, 484, 841
MfeI CAATTG 1 cut(s) 273
MhlI GDGCHC 1 cut(s) 219
MluCI AATT 7 cut(s) 273, 375, 430, 929, 1117, 1133, 1249
MlyI GAGTC 1 cut(s) 403
MmeI TCCRAC 2 cut(s) 208, 278
MroI TCCGGA 2 cut(s) 495, 661
MroXI GAANNNNTTC 1 cut(s) 933
MseI TTAA 1 cut(s) 561
MslI CAYNNNNRTG 2 cut(s) 105, 456
MspA1I CMGCKG 2 cut(s) 437, 724
MspI CCGG 6 cut(s) 25, 172, 326, 496, 662, 741
MspR9I CCNGG 5 cut(s) 62, 172, 213, 382, 1043
MunI CAATTG 1 cut(s) 273
MvaI CCWGG 4 cut(s) 62, 213, 382, 1043
MvnI CGCG 1 cut(s) 162
MwoI GCNNNNNNNGC 2 cut(s) 965, 1020
NciI CCSGG 1 cut(s) 172
NdeII GATC 2 cut(s) 202, 1191
NlaIII CATG 4 cut(s) 455, 461, 1077, 1125
NlaIV GGNNCC 3 cut(s) 179, 441, 1097
NmuCI GTSAC 4 cut(s) 4, 262, 743, 1076
NruI TCGCGA 1 cut(s) 162
PciSI GCTCTTC 2 cut(s) 60, 824
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PdmI GAANNNNTTC 1 cut(s) 933
PfeI GAWTC 2 cut(s) 352, 592
PfoI TCCNGGA 1 cut(s) 60
PkrI GCNGC 7 cut(s) 153, 402, 439, 726, 974, 1025, 1040
PleI GAGTC 1 cut(s) 403
PpsI GAGTC 1 cut(s) 403
PshBI ATTAAT 1 cut(s) 561
Psp6I CCWGG 4 cut(s) 60, 211, 380, 1041
PspFI CCCAGC 2 cut(s) 43, 720
PspGI CCWGG 4 cut(s) 60, 211, 380, 1041
PspN4I GGNNCC 3 cut(s) 179, 441, 1097
PvuII CAGCTG 1 cut(s) 724
RruI TCGCGA 1 cut(s) 162
RsaI GTAC 3 cut(s) 759, 765, 1097
RsaNI GTAC 3 cut(s) 758, 764, 1096
RseI CAYNNNNRTG 2 cut(s) 105, 456
SapI GCTCTTC 2 cut(s) 60, 824
SaqAI TTAA 1 cut(s) 561
SatI GCNGC 7 cut(s) 152, 401, 438, 725, 973, 1024, 1039
Sau3AI GATC 2 cut(s) 202, 1191
ScaI AGTACT 1 cut(s) 759
SchI GAGTC 1 cut(s) 403
ScrFI CCNGG 5 cut(s) 62, 172, 213, 382, 1043
SduI GDGCHC 1 cut(s) 219
SfaNI GCATC 3 cut(s) 133, 296, 499
SfcI CTRYAG 1 cut(s) 618
SgrAI CRCCGGYG 1 cut(s) 740
SmiMI CAYNNNNRTG 2 cut(s) 105, 456
SmlI CTYRAG 3 cut(s) 634, 679, 1256
SmoI CTYRAG 3 cut(s) 634, 679, 1256
SpeI ACTAGT 1 cut(s) 760
Sse9I AATT 7 cut(s) 273, 375, 430, 929, 1117, 1133, 1249
SsiI CCGC 3 cut(s) 168, 437, 821
SspI AATATT 2 cut(s) 471, 1050
SspMI CTAG 6 cut(s) 51, 240, 404, 513, 572, 761
StyD4I CCNGG 5 cut(s) 60, 170, 211, 380, 1041
TaaI ACNGT 1 cut(s) 262
TaqI TCGA 3 cut(s) 18, 129, 201
TasI AATT 7 cut(s) 273, 375, 430, 929, 1117, 1133, 1249
TatI WGTACW 1 cut(s) 757
TauI GCSGC 1 cut(s) 440
TfiI GAWTC 2 cut(s) 352, 592
Tru1I TTAA 1 cut(s) 561
Tru9I TTAA 1 cut(s) 561
TscAI CASTG 1 cut(s) 913
TseFI GTSAC 4 cut(s) 4, 262, 743, 1076
TseI GCWGC 6 cut(s) 151, 400, 724, 972, 1023, 1038
Tsp45I GTSAC 4 cut(s) 4, 262, 743, 1076
TspDTI ATGAA 3 cut(s) 438, 858, 1110
TspGWI ACGGA 2 cut(s) 402, 407
TspRI CASTG 1 cut(s) 913
VspI ATTAAT 1 cut(s) 561
XapI RAATTY 3 cut(s) 430, 1117, 1249
XbaI TCTAGA 1 cut(s) 50
XmiI GTMKAC 1 cut(s) 391
XmnI GAANNNNTTC 1 cut(s) 933
XspI CTAG 6 cut(s) 51, 240, 404, 513, 572, 761
ZrmI AGTACT 1 cut(s) 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.