Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0003679

Physical Location & Seq

Genomic Coordinates Reverse (-)

5553858 .. 5556179

Gene Structure 2322 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g06970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGAATCTCTCCCACAAAAGCTGGTACTTACAGTGGAATCAGAATTCTGCCCCTCGGCAGTTCAATACTGGGCGAATGGCAACACCAAGCGCGGACGCGGGAAGTCCGACGTCACTGAGAAGGCGAAAAGGCACCTCTCCGCCTTGGGATGGAAGTTCTGGTATGCTAACAAGCAGCAGAAGACCGAGTTGCGGTACGAGTCTCCCATCGGAAAAGTCTACTACTCGCTACGCCTTGCTTGCCAAGCCTATGTTACGCAGCAATCGACATCAAGAAAAACGGTTAAGAAGAGAAAGATTGGTAAAACATCGAAGGTCGATGATGATTGGAGTCCGAAACAGAAGCGAGGGAAGGTTCTTGTCACACACCTTTTACGGTCTACCAAAACAGGAATCAAGTGTGACTGTTGTTCTAAGGTGTTTACCCTCACTGGGTTTGAAACACATGCTGGTAGCACAAACCATAGACCCAGCGCCCACATTATTTTGGAAGATGGAAGCACCAACACTGTCACACGGTCAAATGACGACGCGAGGGCTGACAATGTGCATCAAGATCGATCATCATCATCATGAGCAGAATGATGATATATGCATCGTGTGTCACTTTGGAGGCGATCTGATTCTGTGTGATCGGTGTCCTGCTGCATTCCACACTAGTTGTCTCGGTTTGAAGGACTTGTTGGAAGGCGATTGGTTCTGCCCATCGTGTTGCTGTGTGAAGTGTGGTAAAGGAAACCCTAAGGAGGATAGAAATAATGGTTTTGTGATATGTAGCCAATGTGATAAAAAATACCACTTTGGGTGCCTGAGGAATGAAGGGGTTGCGGAATTGGAAATGGATTCCAAAGGAAACTGGTTTTGCAGCAGAAAATGTGAAGGCATATATAAGGGAATCAACAAGATTGTGGGGAAACGAATTCTGGTGGGTCCCGACAATCTGACCTGGACAATATTGAGGCCATCTACTCCGGCTGATTCTGATATGGAAGAATTGACAGAGAACTACAGCAAGCTCAATTTGGCCCTGAGTGTGATGCACGAGTGTTTCGAGCCTTCTAAGGATCCTTACACGAAAAGAGACATTGTCGAGGACATTATTTTCAACAGAGAATCGGACCTTAGCCGCCTGAACTTCAGAAGGTTTTACACAGTGCTTTTGGAGAGAGATGAGGAAGTGACTACCGTCGGTAGCGTGAGGATATACAGTGAGTTGGCGGAAGTACCTCTGGTGGCAACTAGGTTCCATTATCGTAGGCAAGGAATGTGTCGTGTTATGATGGATGAGCTCGAAAACCAGCTCGTCAACTTGGGAGTTGGGAGACTGATTTTGCCTTCTGCTTCTAGCACACTGGCTACATGGACCAGCACTTCATTTGGGTTTTCAAAGATGACACCTAATGAGAGGATGCAGTTTCTGAATTATACTTTCATGGATTTCCAGGGCACCATCTTGTGCCATAAAGTATTGAAACGGACCAACTCTACGACGCAGAAGACAATCAGCCGGAGAATGGAGCTTCAGACCAAGAATTGGGGAACGTTGCCTCCGGTGACAAGTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004407 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0008270 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0015630 GO:0016043 GO:0016462 GO:0016569 GO:0016570 GO:0016575 GO:0016581 GO:0016787 GO:0016810 GO:0016811 GO:0016817 GO:0016818 GO:0016887 GO:0017053 GO:0017111 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0042623 GO:0042826 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0070491 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090545 GO:0090568 GO:0097159 GO:0098732 GO:0140096 GO:0140097 GO:1901363 GO:1901564 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1 Acetyltransf_10 Agenet Jas PHD

Protein Analysis

522

Amino Acids

59.41

Weight (kDa)

9.23

Isoelectric Point (pI)

52.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD	PF00628	198 - 237	9.7e-08	PHD-finger
IDM1_C	PF23209	350 - 488	5e-47	Increased DNA methylation 1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63900
fragaria_vesca	FvH4_2g33101 FvH4_2g33110
malus_domestica	MD03G1066400.v1.1 MD08G1084100.v1.1 MD15G1070200.v1.1
prunus_persica	Prupe.1G423000_v2.0.a1
pyrus_communis	pycom08g06970
rosa_chinensis	RchiOBHm_Chr6g0309551 RchiOBHm_Chr6g0309571
rosa_laevigata	RLG00000010552 RLG00000010554
rosa_multiflora	Rmu_co8092108.1_g000001 Rmu_co8455997.1_g000001 Rmu_co8522085.1_g000002 Rmu_sc0007283.1_g000012 Rmu_sc0007283.1_g000014 Rmu_sc0024715.1_g000002 Rmu_sc0024715.1_g000003 Rmu_sc0030536.1_g000004 Rmu_sc0042371.1_g000001
rosa_roxburghii	Rroxscaffold_7G00159310
rosa_rugosa	Rorug06G0372800 Rorug06G0372900
rosa_samantha	Rh6AG486200 Rh6AG486400 Rh6BG204300 Rh6BG495600 Rh6BG495800 Rh6CG500600 Rh6CG500700 Rh6DG486500 Rh6DG486600
rosa_wichuraiana	Rw6G042350 Rw6G042360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	113
AccB1I	GGYRCC	3 cut(s)	131, 804, 1445
AccB7I	CCANNNNNTGG	1 cut(s)	1533
AccI	GTMKAC	2 cut(s)	218, 379
AccII	CGCG	3 cut(s)	92, 98, 532
AciI	CCGC	7 cut(s)	92, 98, 140, 192, 827, 1126, 1217
AclI	AACGTT	1 cut(s)	1541
AclWI	GGATC	2 cut(s)	1058, 1071
AcsI	RAATTY	2 cut(s)	43, 918
AcuI	CTGAAG	2 cut(s)	1120, 1505
AcyI	GRCGYC	1 cut(s)	110
AfaI	GTAC	3 cut(s)	26, 196, 1224
AfiI	CCNNNNNNNGG	6 cut(s)	149, 191, 431, 745, 1513, 1533
AgsI	TTSAA	6 cut(s)	64, 439, 673, 1105, 1386, 1471
AhlI	ACTAGT	1 cut(s)	656
AjnI	CCWGG	2 cut(s)	944, 1440
AjuI	GAANNNNNNNTTGG	2 cut(s)	665, 697
AloI	GAACNNNNNNTCC	2 cut(s)	1531, 1563
AluBI	AGCT	5 cut(s)	21, 1015, 1288, 1300, 1519
AluI	AGCT	5 cut(s)	21, 1015, 1288, 1300, 1519
Alw21I	GWGCWC	1 cut(s)	1290
Alw26I	GTCTC	4 cut(s)	206, 668, 1074, 1315
AlwI	GGATC	2 cut(s)	1058, 1071
AlwNI	CAGNNNCTG	1 cut(s)	1417
AoxI	GGCC	2 cut(s)	959, 1023
ApeKI	GCWGC	4 cut(s)	174, 258, 644, 864
ApoI	RAATTY	2 cut(s)	43, 918
AspLEI	GCGC	2 cut(s)	92, 475
AspS9I	GGNCC	5 cut(s)	929, 1024, 1117, 1362, 1476
AsuHPI	GGTGA	1 cut(s)	1564
AvaII	GGWCC	4 cut(s)	929, 1117, 1362, 1476
AxyI	CCTNAGG	2 cut(s)	741, 809
BaeGI	GKGCMC	1 cut(s)	1448
BamHI	GGATCC	1 cut(s)	1063
BanI	GGYRCC	3 cut(s)	131, 804, 1445
BanII	GRGCYC	1 cut(s)	1290
BauI	CACGAG	1 cut(s)	1040
BbsI	GAAGAC	2 cut(s)	187, 1502
Bbv12I	GWGCWC	1 cut(s)	1290
BbvI	GCAGC	4 cut(s)	186, 270, 631, 876
BccI	CCATC	7 cut(s)	143, 214, 487, 712, 970, 1273, 1457
BcgI	CGANNNNNNTGC	2 cut(s)	538, 572
BciT130I	CCWGG	2 cut(s)	946, 1442
BcoDI	GTCTC	4 cut(s)	206, 668, 1074, 1315
BcuI	ACTAGT	1 cut(s)	656
BfaI	CTAG	3 cut(s)	657, 1239, 1344
BfmI	CTRYAG	1 cut(s)	1006
BfoI	RGCGCY	1 cut(s)	476
BisI	GCNGC	5 cut(s)	175, 259, 645, 865, 1126
BlsI	GCNGC	5 cut(s)	176, 260, 646, 866, 1127
Bme1390I	CCNGG	2 cut(s)	946, 1442
Bme18I	GGWCC	4 cut(s)	929, 1117, 1362, 1476
BmgT120I	GGNCC	5 cut(s)	929, 1024, 1117, 1362, 1476
BmiI	GGNNCC	7 cut(s)	133, 806, 930, 931, 1065, 1244, 1447
BmrFI	CCNGG	2 cut(s)	946, 1442
BmrI	ACTGGG	2 cut(s)	78, 440
BmsI	GCATC	4 cut(s)	558, 603, 1026, 1398
BmuI	ACTGGG	2 cut(s)	78, 440
BoxI	GACNNNNGTC	1 cut(s)	1184
BpiI	GAAGAC	2 cut(s)	187, 1502
Bpu10I	CCTNAGC	1 cut(s)	1121
Bsa29I	ATCGAT	1 cut(s)	558
BsaBI	GATNNNNATC	1 cut(s)	564
BsaHI	GRCGYC	1 cut(s)	110
BsaJI	CCNNGG	3 cut(s)	53, 143, 1441
BsaWI	WCCGGW	1 cut(s)	1549
BsaXI	ACNNNNNCTCC	2 cut(s)	1531, 1561
Bsc4I	CCNNNNNNNGG	6 cut(s)	149, 191, 431, 745, 1513, 1533
Bse1I	ACTGG	4 cut(s)	73, 435, 860, 1356
Bse21I	CCTNAGG	2 cut(s)	741, 809
Bse8I	GATNNNNATC	1 cut(s)	564
BseBI	CCWGG	2 cut(s)	946, 1442
BseCI	ATCGAT	1 cut(s)	558
BseDI	CCNNGG	3 cut(s)	53, 143, 1441
BseGI	GGATG	3 cut(s)	154, 1288, 1413
BseJI	GATNNNNATC	1 cut(s)	564
BseLI	CCNNNNNNNGG	6 cut(s)	149, 191, 431, 745, 1513, 1533
BseMII	CTCAG	3 cut(s)	107, 800, 1019
BseNI	ACTGG	4 cut(s)	73, 435, 860, 1356
BseSI	GKGCMC	1 cut(s)	1448
BseXI	GCAGC	4 cut(s)	186, 270, 631, 876
BseYI	CCCAGC	1 cut(s)	469
Bsh1236I	CGCG	3 cut(s)	92, 98, 532
BshFI	GGCC	2 cut(s)	961, 1025
BshNI	GGYRCC	3 cut(s)	131, 804, 1445
BshVI	ATCGAT	1 cut(s)	558
BsiHKAI	GWGCWC	1 cut(s)	1290
BsiSI	CCGG	3 cut(s)	971, 1507, 1550
BslFI	GGGAC	1 cut(s)	915
BslI	CCNNNNNNNGG	6 cut(s)	149, 191, 431, 745, 1513, 1533
BsmAI	GTCTC	4 cut(s)	206, 668, 1074, 1315
BsmFI	GGGAC	1 cut(s)	915
BsmI	GAATGC	1 cut(s)	647
BsnI	GGCC	2 cut(s)	961, 1025
Bsp1286I	GDGCHC	2 cut(s)	1290, 1448
Bsp143I	GATC	5 cut(s)	555, 559, 616, 631, 1063
BspACI	CCGC	7 cut(s)	92, 98, 140, 192, 827, 1126, 1217
BspANI	GGCC	2 cut(s)	961, 1025
BspCNI	CTCAG	3 cut(s)	108, 801, 1020
BspDI	ATCGAT	1 cut(s)	558
BspFNI	CGCG	3 cut(s)	92, 98, 532
BspHI	TCATGA	1 cut(s)	571
BspLI	GGNNCC	7 cut(s)	133, 806, 930, 931, 1065, 1244, 1447
BspPI	GGATC	2 cut(s)	1058, 1071
BspT107I	GGYRCC	3 cut(s)	131, 804, 1445
BsrI	ACTGG	4 cut(s)	73, 435, 860, 1356
BssECI	CCNNGG	3 cut(s)	53, 143, 1441
BssMI	GATC	5 cut(s)	555, 559, 616, 631, 1063
BssNI	GRCGYC	1 cut(s)	110
BssSI	CACGAG	1 cut(s)	1040
BssT1I	CCWWGG	1 cut(s)	143
Bst2BI	CACGAG	1 cut(s)	1040
Bst2UI	CCWGG	2 cut(s)	946, 1442
Bst4CI	ACNGT	9 cut(s)	33, 282, 377, 406, 510, 518, 1153, 1186, 1208
Bst6I	CTCTTC	1 cut(s)	283
BstACI	GRCGYC	1 cut(s)	110
BstC8I	GCNNGC	2 cut(s)	240, 1013
BstDEI	CTNAG	7 cut(s)	116, 413, 741, 809, 1028, 1059, 1121
BstF5I	GGATG	3 cut(s)	154, 1288, 1413
BstFNI	CGCG	3 cut(s)	92, 98, 532
BstH2I	RGCGCY	1 cut(s)	476
BstHHI	GCGC	2 cut(s)	92, 475
BstKTI	GATC	5 cut(s)	558, 562, 619, 634, 1066
BstMAI	GTCTC	4 cut(s)	206, 668, 1074, 1315
BstMBI	GATC	5 cut(s)	555, 559, 616, 631, 1063
BstMWI	GCNNNNNNNGC	2 cut(s)	239, 244
BstNI	CCWGG	2 cut(s)	946, 1442
BstNSI	RCATGY	1 cut(s)	448
BstPAI	GACNNNNGTC	1 cut(s)	1184
BstSCI	CCNGG	2 cut(s)	944, 1440
BstSFI	CTRYAG	1 cut(s)	1006
BstSLI	GKGCMC	1 cut(s)	1448
BstUI	CGCG	3 cut(s)	92, 98, 532
BstV1I	GCAGC	4 cut(s)	186, 270, 631, 876
BstV2I	GAAGAC	2 cut(s)	187, 1502
BstX2I	RGATCY	1 cut(s)	1063
BstYI	RGATCY	1 cut(s)	1063
Bsu15I	ATCGAT	1 cut(s)	558
Bsu36I	CCTNAGG	2 cut(s)	741, 809
BsuRI	GGCC	2 cut(s)	961, 1025
BsuTUI	ATCGAT	1 cut(s)	558
BtsCI	GGATG	3 cut(s)	154, 1288, 1413
BtsIMutI	CAGTG	7 cut(s)	38, 113, 428, 506, 1158, 1213, 1349
Cac8I	GCNNGC	2 cut(s)	240, 1013
CaiI	CAGNNNCTG	1 cut(s)	1417
CciI	TCATGA	1 cut(s)	571
CfoI	GCGC	2 cut(s)	92, 475
Cfr13I	GGNCC	5 cut(s)	929, 1024, 1117, 1362, 1476
ClaI	ATCGAT	1 cut(s)	558
CseI	GACGC	3 cut(s)	104, 538, 1498
Csp6I	GTAC	3 cut(s)	25, 195, 1223
CspCI	CAANNNNNGTGG	2 cut(s)	641, 676
CviAII	CATG	4 cut(s)	445, 572, 1359, 1432
CviQI	GTAC	3 cut(s)	25, 195, 1223
DdeI	CTNAG	7 cut(s)	116, 413, 741, 809, 1028, 1059, 1121
DpnI	GATC	5 cut(s)	557, 561, 618, 633, 1065
DpnII	GATC	5 cut(s)	555, 559, 616, 631, 1063
Eam1104I	CTCTTC	1 cut(s)	283
EarI	CTCTTC	1 cut(s)	283
EciI	GGCGGA	2 cut(s)	129, 1232
Ecl136II	GAGCTC	1 cut(s)	1288
Eco130I	CCWWGG	1 cut(s)	143
Eco24I	GRGCYC	1 cut(s)	1290
Eco47I	GGWCC	4 cut(s)	929, 1117, 1362, 1476
Eco53kI	GAGCTC	1 cut(s)	1288
Eco57I	CTGAAG	2 cut(s)	1120, 1505
Eco81I	CCTNAGG	2 cut(s)	741, 809
EcoICRI	GAGCTC	1 cut(s)	1288
EcoO109I	RGGNCCY	1 cut(s)	929
EcoRI	GAATTC	2 cut(s)	43, 918
EcoRII	CCWGG	2 cut(s)	944, 1440
EcoT14I	CCWWGG	1 cut(s)	143
EcoT22I	ATGCAT	1 cut(s)	596
EcoT38I	GRGCYC	1 cut(s)	1290
ErhI	CCWWGG	1 cut(s)	143
FaeI	CATG	4 cut(s)	448, 575, 1362, 1435
FaqI	GGGAC	1 cut(s)	915
FatI	CATG	4 cut(s)	444, 571, 1358, 1431
FauI	CCCGC	1 cut(s)	91
FblI	GTMKAC	2 cut(s)	218, 379
Fnu4HI	GCNGC	5 cut(s)	175, 259, 645, 865, 1126
FokI	GGATG	3 cut(s)	161, 1295, 1420
FriOI	GRGCYC	1 cut(s)	1290
Fsp4HI	GCNGC	5 cut(s)	175, 259, 645, 865, 1126
FspBI	CTAG	3 cut(s)	657, 1239, 1344
GlaI	GCGC	2 cut(s)	91, 474
GluI	GCNGC	5 cut(s)	175, 259, 645, 865, 1126
GsaI	CCCAGC	1 cut(s)	473
HaeII	RGCGCY	1 cut(s)	476
HaeIII	GGCC	2 cut(s)	961, 1025
HapII	CCGG	3 cut(s)	971, 1507, 1550
HgaI	GACGC	3 cut(s)	104, 538, 1498
HhaI	GCGC	2 cut(s)	92, 475
Hin1I	GRCGYC	1 cut(s)	110
Hin1II	CATG	4 cut(s)	448, 575, 1362, 1435
Hin6I	GCGC	2 cut(s)	90, 473
HinP1I	GCGC	2 cut(s)	90, 473
HincII	GTYRAC	1 cut(s)	1306
HindII	GTYRAC	1 cut(s)	1306
HpaII	CCGG	3 cut(s)	971, 1507, 1550
HphI	GGTGA	1 cut(s)	1564
Hpy166II	GTNNAC	4 cut(s)	219, 380, 422, 1306
Hpy188III	TCNNGA	4 cut(s)	272, 553, 572, 932
Hpy8I	GTNNAC	4 cut(s)	219, 380, 422, 1306
Hpy99I	CGWCG	4 cut(s)	112, 532, 1190, 1492
HpyCH4III	ACNGT	9 cut(s)	33, 282, 377, 406, 510, 518, 1153, 1186, 1208
HpyCH4IV	ACGT	2 cut(s)	110, 1541
HpyCH4V	TGCA	6 cut(s)	549, 594, 647, 864, 1039, 1411
HpyF10VI	GCNNNNNNNGC	2 cut(s)	239, 244
HpyF3I	CTNAG	7 cut(s)	116, 413, 741, 809, 1028, 1059, 1121
HpySE526I	ACGT	2 cut(s)	110, 1541
Hsp92I	GRCGYC	1 cut(s)	110
Hsp92II	CATG	4 cut(s)	448, 575, 1362, 1435
HspAI	GCGC	2 cut(s)	90, 473
KflI	GGGWCCC	1 cut(s)	929
Kzo9I	GATC	5 cut(s)	555, 559, 616, 631, 1063
LmnI	GCTCC	1 cut(s)	1516
Lsp1109I	GCAGC	4 cut(s)	186, 270, 631, 876
LweI	GCATC	4 cut(s)	558, 603, 1026, 1398
MaeI	CTAG	3 cut(s)	657, 1239, 1344
MaeII	ACGT	2 cut(s)	110, 1541
MaeIII	GTNAC	8 cut(s)	111, 252, 360, 400, 510, 602, 1177, 1552
MalI	GATC	5 cut(s)	557, 561, 618, 633, 1065
MboI	GATC	5 cut(s)	555, 559, 616, 631, 1063
MboII	GAAGA	5 cut(s)	192, 300, 502, 1001, 1507
MflI	RGATCY	1 cut(s)	1063
MhlI	GDGCHC	2 cut(s)	1290, 1448
MluCI	AATT	7 cut(s)	43, 830, 918, 992, 1018, 1420, 1531
MlyI	GAGTC	2 cut(s)	208, 339
MmeI	TCCRAC	2 cut(s)	131, 663
Mph1103I	ATGCAT	1 cut(s)	596
MseI	TTAA	1 cut(s)	284
MslI	CAYNNNNRTG	1 cut(s)	570
MspI	CCGG	3 cut(s)	971, 1507, 1550
MspR9I	CCNGG	2 cut(s)	946, 1442
Mva1269I	GAATGC	1 cut(s)	647
MvaI	CCWGG	2 cut(s)	946, 1442
MvnI	CGCG	3 cut(s)	92, 98, 532
MwoI	GCNNNNNNNGC	2 cut(s)	239, 244
NdeII	GATC	5 cut(s)	555, 559, 616, 631, 1063
NlaIII	CATG	4 cut(s)	448, 575, 1362, 1435
NlaIV	GGNNCC	7 cut(s)	133, 806, 930, 931, 1065, 1244, 1447
NmeAIII	GCCGAG	1 cut(s)	34
NmuCI	GTSAC	7 cut(s)	111, 360, 400, 510, 602, 1177, 1552
NsiI	ATGCAT	1 cut(s)	596
NspI	RCATGY	1 cut(s)	448
PagI	TCATGA	1 cut(s)	571
PcsI	WCGNNNNNNNCGW	2 cut(s)	262, 1047
PctI	GAATGC	1 cut(s)	647
PfeI	GAWTC	8 cut(s)	4, 37, 392, 622, 842, 894, 977, 1112
PflFI	GACNNNGTC	1 cut(s)	1085
PflMI	CCANNNNNTGG	1 cut(s)	1533
PkrI	GCNGC	5 cut(s)	176, 260, 646, 866, 1127
PleI	GAGTC	2 cut(s)	207, 338
PpsI	GAGTC	2 cut(s)	207, 338
PpuMI	RGGWCCY	1 cut(s)	929
PshAI	GACNNNNGTC	1 cut(s)	1184
Psp124BI	GAGCTC	1 cut(s)	1290
Psp1406I	AACGTT	1 cut(s)	1541
Psp5II	RGGWCCY	1 cut(s)	929
Psp6I	CCWGG	2 cut(s)	944, 1440
PspFI	CCCAGC	1 cut(s)	469
PspGI	CCWGG	2 cut(s)	944, 1440
PspN4I	GGNNCC	7 cut(s)	133, 806, 930, 931, 1065, 1244, 1447
PspPI	GGNCC	5 cut(s)	929, 1024, 1117, 1362, 1476
PspPPI	RGGWCCY	1 cut(s)	929
PstNI	CAGNNNCTG	1 cut(s)	1417
PsuI	RGATCY	1 cut(s)	1063
PsyI	GACNNNGTC	1 cut(s)	1085
RsaI	GTAC	3 cut(s)	26, 196, 1224
RsaNI	GTAC	3 cut(s)	25, 195, 1223
RseI	CAYNNNNRTG	1 cut(s)	570
SacI	GAGCTC	1 cut(s)	1290
SaqAI	TTAA	1 cut(s)	284
SatI	GCNGC	5 cut(s)	175, 259, 645, 865, 1126
Sau3AI	GATC	5 cut(s)	555, 559, 616, 631, 1063
Sau96I	GGNCC	5 cut(s)	929, 1024, 1117, 1362, 1476
SchI	GAGTC	2 cut(s)	208, 339
ScrFI	CCNGG	2 cut(s)	946, 1442
SduI	GDGCHC	2 cut(s)	1290, 1448
SfaNI	GCATC	4 cut(s)	558, 603, 1026, 1398
SfcI	CTRYAG	1 cut(s)	1006
SinI	GGWCC	4 cut(s)	929, 1117, 1362, 1476
SmiMI	CAYNNNNRTG	1 cut(s)	570
SpeI	ACTAGT	1 cut(s)	656
Sse9I	AATT	7 cut(s)	43, 830, 918, 992, 1018, 1420, 1531
SsiI	CCGC	7 cut(s)	92, 98, 140, 192, 827, 1126, 1217
SspI	AATATT	1 cut(s)	954
SspMI	CTAG	3 cut(s)	657, 1239, 1344
SstI	GAGCTC	1 cut(s)	1290
StyD4I	CCNGG	2 cut(s)	944, 1440
StyI	CCWWGG	1 cut(s)	143
TaaI	ACNGT	9 cut(s)	33, 282, 377, 406, 510, 518, 1153, 1186, 1208
TaiI	ACGT	2 cut(s)	113, 1544
TaqI	TCGA	7 cut(s)	265, 310, 317, 558, 1050, 1089, 1290
TaqII	GACCGA	1 cut(s)	199
TasI	AATT	7 cut(s)	43, 830, 918, 992, 1018, 1420, 1531
TauI	GCSGC	1 cut(s)	1128
TfiI	GAWTC	8 cut(s)	4, 37, 392, 622, 842, 894, 977, 1112
Tru1I	TTAA	1 cut(s)	284
Tru9I	TTAA	1 cut(s)	284
TscAI	CASTG	7 cut(s)	38, 120, 435, 513, 1158, 1213, 1356
TseFI	GTSAC	7 cut(s)	111, 360, 400, 510, 602, 1177, 1552
TseI	GCWGC	4 cut(s)	174, 258, 644, 864
Tsp45I	GTSAC	7 cut(s)	111, 360, 400, 510, 602, 1177, 1552
TspDTI	ATGAA	4 cut(s)	17, 831, 1362, 1420
TspGWI	ACGGA	1 cut(s)	1489
TspRI	CASTG	7 cut(s)	38, 120, 435, 513, 1158, 1213, 1356
Tth111I	GACNNNGTC	1 cut(s)	1085
Van91I	CCANNNNNTGG	1 cut(s)	1533
VpaK11BI	GGWCC	4 cut(s)	929, 1117, 1362, 1476
XapI	RAATTY	2 cut(s)	43, 918
XceI	RCATGY	1 cut(s)	448
XmiI	GTMKAC	2 cut(s)	218, 379
XspI	CTAG	3 cut(s)	657, 1239, 1344
ZraI	GACGTC	1 cut(s)	111
Zsp2I	ATGCAT	1 cut(s)	596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.