FvH4_3g11430

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0003891
Physical Location & Seq
Forward (+)
6735379 .. 6742064
6686 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g11430.t5

Sequence Viewer

Length: 2997 bp
ATGGAAGAGACGGGTTTTGCAGCAGAATCTCAGCCAAAAGAGGTTCATTCTTCTAACAACAAGCAGAGAAGTGATAACACAGTTGAGTGCTCTGACAGTCTTCTAAGTCAAAAGATAGCAGCCAGATGGGTTCCAGATGAAGCATGTCGGCCTGTTATTGATGATGCACCTGTATTTTATCCAACTGCAGAGGAGTTCGCAGATACGCTTGGTTACATAGCAAAGATTTGGACACAGGCTGAATCTTATGGTATTTGTCGGATTGTCCCTCCACATTCCTGGATCCCTCCTTGCCCTCTTAAAGAGAAAGACATGTGGGAAAATGCAAAATTTTCTACACGTATTCAACAAGTTGACTTGCTTCAAAATAGGGAGTCCATGAAAAAGAAAACTCGAGGTCGGAAGCGAAAACGACGAAGACACTCAAAGAGACGTGCAGAAGCTAATGCTGCTTCTGACACTGATGAGAAGTTTGGGTTCCAGTCAGGATCAGACTTTACATTTGCAGAGTTTCAGAGACATGCCTTTACTTTCAAGGAAAGTTACTTTGGAACACAAGACTGTAAGGAGGGTTCAAATTCTGGTGGAAATAACAAAAAAAGATGGGAACCCTCTGCGGAGGATATTGAAGGTGAATACTGGCGAATAGTTGAGCAACCAACAGATGAGGTTGAGGTTTACTATGGAGCTGACTTGGAAACAGGAGTATTTGGAAGTGGTTTTCCCAAGGCATCATCCGTAGTAACTAAGAGTGACCCAGATCTATATGCAATGTCAGGCTGGAATCTAAATAACTTGCCTCGCCTGCCTGGTTCGGTACTATGTTTTGAGGAAAGTGATATATCGGGAGTTCTAGTCCCATGGCTCTACGTTGGGATGTGCTTTTCTTCATTTTGCTGGCATGTTGAGGACCACCACCTTTATTCGCTAAATTATCTGCATTTTGGTGACCCAAAAGTATGGTATGGAGTGTCCGGAAGCCGTGCTACCTCTCTGGAACAAGCAATGAGAAAGCATTTGCCGGATTTGTTCGAGGAACAACCTGATTTACTCAATGAACTGGTTACTCAGCTATCCCCGTCAGTTTTAAAGTCTGAGGGTGTACCTGTGCATCGAGTTGTCCAACATGCTGGGGAGTTCGTTCTTACCTTCCCGAGGGCATATCACGCTGGATTTAATTGCGGTTTCAACTGTGCCGAGGCAGTAAATGTCGCCCCTGTTGATTGGTTACAACATGGCCAAACTGCAGTTGAGCTTTACAGTAAGCAGTGTCGCAAGACATCACTGTCACACGACAAATTGTTACTGCGGTCAGCTCTGGACGCCGTGCAGGTTCTCGGACAGACATCACTTGGAACAAAGTTTATTAGCAATCGGAGCTGGCAAAAAGTTTGTGGCAAAGATGGTATGCTCACCAAAGCAGTTAAGAGACGAGTGGAGATGGAGGAGGAAAGATTGGATCGTCTTCCAATTTGTTGGAAGTCGCAAAAGATGGACAGAGACTTTGATTCGAACACTGAGAGAGAATGTTTTTCGTGCTTCTATGACTTACACTTATCGGCTGCCAGCTGCAACTGCTCTCCTGACCGATTTTCATGTCTCAAACATGCAAAGCATTTCTGTTCATGTGAAATGACTCAGAGATATGTCCTTCTCCGCTACACTGTCGAGGAATTAAATCTGCTGGTCAAAGCATTGGAAGGGGAGTTGGATGCCATTCACGTATGGGCATCCAAGGATTCTGGAGTAGTTTCTATAGACTACACTCATAAGTGTGCGGCTAAGAAGCCTAAGCTGGATGGAGCTTCCAAGTCTTGTGATCCCATGGAAATTATGCCTGATTGCCCAATTTCAGAAGATAAGGTTAACATGAATGGATCTTGCAGTTCCTCTAGTCATGTTTCTTCTGCAGTAGTTCAGTCAGGGTCACCGGATGATCATAATGGACATGAGTCTTTGGTTGTGAATGCTGCACCAAAGGTGGAGCATGATTGCAGTTTTGATTTGAATCTCAATTGTGCGTCTGATGAACATGAAAGCAAGGTAATTGACGTATCTGACGGCTGTGATAATAAGACTAGCACAATTGAGGAAGAAACATCCACATCAATGTCCAATCAAGAGAAGGCGAGCATGTCTGAGGGTAATAAGTTGTTTGGTGTTGATCTGGGCTTATCACGTCCTGCTTCAAACATACCACCAATCAGTTCTTCGAAAACTGAAATTGTTGATACCGCGGCTGTGAATGCATCCATGAGACAAAAAAGCTATCAATCAAGATCTTTGAGTCTTGTTGAGCCTTTGAATTTCGGATCTCTCATGGCTGGGAACTATTGGTGCACTAAGCAGGTCATATATCCTAAAGGGTTCAGAAGCCGAATTAAGTACTACAGTGTGCTGGACCCGACAAAACTGTGTAGTTATATATCAGAAGTTCTTGATGCTGGGCTTCTTGGGCCCCTATTTAAGGTTAGTTTAGAAGAATACCCAGAGGAGTCTTTTGCGAATGTATCAGCAGACAAGTGCTGGGAGATGGTACTAAATAGACTAAACAATGAAATAAGTAGACGGAGTAGTCTAGCCGAAAGAGGGCTACCCCCTTTACAGTATTCACAGAGCATTAACGGGTTTGCAATGTTTGGCTTTCTCTCCCAACCCATTGTTGAGGCTATTGAGGCACTTGATCCGGATCATCAATGCACGGAGTACTGGAATCACAGGCGTAAGCAGCAGCATTCATCTGTACCAAGCTCTCTAGGATTGCCACAGACGAAACTCTTTGGTATAAATATGACAAACAAGGAGCAAAATGAGGGTGAGCACTCAATCAATGAGACACAGTTAGTATTACGAAGACTCATAGAGAAGGCGAATCCAACTCCCGAAGAGTTTAGGACATTACATAGAATCTTCTCCAGTCAGTCAGTCGAATCGAGAGTGGCATGCGCAGACTTGATTGAAGAGATGCAGAGAAATGTAGATAACATGAAGCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008214 GO:0008276 GO:0009314 GO:0009416 GO:0009555 GO:0009628 GO:0009648 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010154 GO:0010216 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016577 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032451 GO:0032452 GO:0032453 GO:0032501 GO:0032502 GO:0034641 GO:0034647 GO:0034720 GO:0034721 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0048229 GO:0048316 GO:0048519 GO:0048523 GO:0048573 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYRC FYRN JmjC JmjN zf-C5HC2

Protein Analysis

999

Amino Acids

112.24

Weight (kDa)

5.68

Isoelectric Point (pI)

53.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjN PF02375 57 - 90 7.9e-15 jmjN domain
JmjC PF02373 288 - 404 5.3e-46 JmjC domain, hydroxylase
zf-C5HC2 PF02928 510 - 560 1.6e-14 C5HC2 zinc finger
FYRN PF05964 768 - 814 5e-11 F/Y-rich N-terminus
FYRC PF05965 819 - 907 6.8e-22 F/Y rich C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1285, 2574
Acc16I TGCGCA 1 cut(s) 2947
Acc36I ACCTGC 2 cut(s) 1321, 2338
AccI GTMKAC 1 cut(s) 2566
AccII CGCG 1 cut(s) 2237
AccIII TCCGGA 2 cut(s) 974, 2686
AciI CCGC 7 cut(s) 617, 1182, 1309, 1657, 1778, 2235, 2237
AclWI GGATC 9 cut(s) 277, 290, 496, 1467, 1814, 1885, 2320, 2678, 2697
AcoI YGGCCR 1 cut(s) 1237
AcsI RAATTY 3 cut(s) 329, 577, 2305
AcyI GRCGYC 1 cut(s) 1323
AfaI GTAC 6 cut(s) 819, 1104, 2387, 2538, 2708, 2745
AfiI CCNNNNNNNGG 3 cut(s) 1155, 2467, 2589
AflIII ACRYGT 2 cut(s) 312, 338
AjiI CACGTC 2 cut(s) 434, 2180
AjnI CCWGG 2 cut(s) 278, 808
AjuI GAANNNNNNNTTGG 4 cut(s) 531, 563, 2194, 2226
Alw21I GWGCWC 3 cut(s) 92, 2342, 2823
Alw26I GTCTC 8 cut(s) 2, 424, 511, 1423, 1494, 1604, 2251, 2828
Alw44I GTGCAC 1 cut(s) 2338
AlwI GGATC 9 cut(s) 277, 290, 496, 1467, 1814, 1885, 2320, 2678, 2697
Ama87I CYCGRG 2 cut(s) 393, 1153
Aor13HI TCCGGA 2 cut(s) 974, 2686
AoxI GGCC 3 cut(s) 149, 1237, 2456
ApaI GGGCCC 1 cut(s) 2460
ApaLI GTGCAC 1 cut(s) 2338
ApeKI GCWGC 8 cut(s) 20, 119, 449, 1562, 1569, 1970, 2728, 2731
ApoI RAATTY 3 cut(s) 329, 577, 2305
ArsI GACNNNNNNTTYG 4 cut(s) 485, 517, 1487, 1519
AspLEI GCGC 1 cut(s) 2948
AspS9I GGNCC 4 cut(s) 910, 2401, 2456, 2457
AsuHPI GGTGA 5 cut(s) 644, 959, 1405, 1920, 2828
AsuII TTCGAA 2 cut(s) 1511, 2213
AvaI CYCGRG 2 cut(s) 393, 1153
AvaII GGWCC 2 cut(s) 910, 2401
BaeGI GKGCMC 2 cut(s) 2342, 2460
BalI TGGCCA 1 cut(s) 1239
BamHI GGATCC 1 cut(s) 282
BanII GRGCYC 1 cut(s) 2460
BarI GAAGNNNNNNTAC 2 cut(s) 970, 1002
BbsI GAAGAC 4 cut(s) 92, 424, 1457, 2860
Bbv12I GWGCWC 3 cut(s) 92, 2342, 2823
BbvI GCAGC 8 cut(s) 32, 131, 436, 1549, 1556, 1957, 2740, 2743
BccI CCATC 7 cut(s) 120, 597, 1397, 1435, 1486, 1793, 2527
BceAI ACGGC 3 cut(s) 966, 1310, 2077
BciT130I CCWGG 2 cut(s) 280, 810
BclI TGATCA 1 cut(s) 1936
BcoDI GTCTC 8 cut(s) 2, 424, 511, 1423, 1494, 1604, 2251, 2828
BfaI CTAG 5 cut(s) 854, 1893, 2079, 2579, 2756
BfmI CTRYAG 5 cut(s) 186, 1245, 1755, 1908, 2389
BfuAI ACCTGC 2 cut(s) 1321, 2338
BglII AGATCT 2 cut(s) 760, 2279
BmcAI AGTACT 2 cut(s) 2387, 2708
Bme1390I CCNGG 2 cut(s) 280, 810
Bme18I GGWCC 2 cut(s) 910, 2401
BmeT110I CYCGRG 2 cut(s) 393, 1153
BmgBI CACGTC 2 cut(s) 434, 2180
BmgT120I GGNCC 4 cut(s) 910, 2401, 2456, 2457
BmiI GGNNCC 7 cut(s) 132, 284, 479, 609, 2403, 2458, 2459
BmrFI CCNGG 2 cut(s) 280, 810
BmsI GCATC 8 cut(s) 154, 740, 1120, 1702, 1739, 2258, 2431, 2955
BoxI GACNNNNGTC 1 cut(s) 1951
BpiI GAAGAC 4 cut(s) 92, 424, 1457, 2860
BpmI CTGGAG 2 cut(s) 1764, 2899
Bpu10I CCTNAGC 1 cut(s) 1791
Bpu14I TTCGAA 2 cut(s) 1511, 2213
BsaAI YACGTR 2 cut(s) 341, 1723
BsaBI GATNNNNATC 2 cut(s) 2007, 2688
BsaHI GRCGYC 1 cut(s) 1323
BsaJI CCNNGG 7 cut(s) 726, 860, 1154, 1197, 1734, 1824, 2235
BsaWI WCCGGW 3 cut(s) 974, 1930, 2686
BsaXI ACNNNNNCTCC 2 cut(s) 840, 870
Bsc4I CCNNNNNNNGG 3 cut(s) 1155, 2467, 2589
Bse1I ACTGG 5 cut(s) 481, 644, 1065, 2714, 2916
Bse3DI GCAATG 3 cut(s) 777, 1011, 2640
Bse8I GATNNNNATC 2 cut(s) 2007, 2688
BseAI TCCGGA 2 cut(s) 974, 2686
BseBI CCWGG 2 cut(s) 280, 810
BseDI CCNNGG 7 cut(s) 726, 860, 1154, 1197, 1734, 1824, 2235
BseGI GGATG 8 cut(s) 734, 882, 1717, 1730, 1804, 1939, 2099, 2249
BseJI GATNNNNATC 2 cut(s) 2007, 2688
BseLI CCNNNNNNNGG 3 cut(s) 1155, 2467, 2589
BseMI GCAATG 3 cut(s) 777, 1011, 2640
BseMII CTCAG 6 cut(s) 44, 1082, 1086, 1509, 1652, 2130
BseNI ACTGG 5 cut(s) 481, 644, 1065, 2714, 2916
BseRI GAGGAG 3 cut(s) 206, 1460, 2507
BseSI GKGCMC 2 cut(s) 2342, 2460
BseXI GCAGC 8 cut(s) 32, 131, 436, 1549, 1556, 1957, 2740, 2743
BseYI CCCAGC 4 cut(s) 1130, 2324, 2444, 2526
BsgI GTGCAG 3 cut(s) 456, 1349, 1956
Bsh1236I CGCG 1 cut(s) 2237
BshFI GGCC 3 cut(s) 151, 1239, 2458
BsiHKAI GWGCWC 3 cut(s) 92, 2342, 2823
BsiHKCI CYCGRG 2 cut(s) 393, 1153
BsiSI CCGG 4 cut(s) 975, 1022, 1931, 2687
BslFI GGGAC 2 cut(s) 251, 842
BslI CCNNNNNNNGG 3 cut(s) 1155, 2467, 2589
BsmAI GTCTC 8 cut(s) 2, 424, 511, 1423, 1494, 1604, 2251, 2828
BsmBI CGTCTC 3 cut(s) 2, 424, 1423
BsmFI GGGAC 2 cut(s) 251, 842
BsmI GAATGC 3 cut(s) 1972, 2251, 2734
BsnI GGCC 3 cut(s) 151, 1239, 2458
BsoBI CYCGRG 2 cut(s) 393, 1153
Bsp119I TTCGAA 2 cut(s) 1511, 2213
Bsp120I GGGCCC 1 cut(s) 2456
Bsp1286I GDGCHC 4 cut(s) 92, 2342, 2460, 2823
Bsp13I TCCGGA 2 cut(s) 974, 2686
Bsp19I CCATGG 2 cut(s) 860, 1824
BspACI CCGC 7 cut(s) 617, 1182, 1309, 1657, 1778, 2235, 2237
BspANI GGCC 3 cut(s) 151, 1239, 2458
BspCNI CTCAG 6 cut(s) 43, 1081, 1087, 1510, 1651, 2131
BspEI TCCGGA 2 cut(s) 974, 2686
BspFNI CGCG 1 cut(s) 2237
BspLI GGNNCC 7 cut(s) 132, 284, 479, 609, 2403, 2458, 2459
BspMAI CTGCAG 3 cut(s) 190, 1249, 1912
BspMI ACCTGC 2 cut(s) 1321, 2338
BspPI GGATC 9 cut(s) 277, 290, 496, 1467, 1814, 1885, 2320, 2678, 2697
BspT104I TTCGAA 2 cut(s) 1511, 2213
BsrDI GCAATG 3 cut(s) 777, 1011, 2640
BsrI ACTGG 5 cut(s) 481, 644, 1065, 2714, 2916
BssECI CCNNGG 7 cut(s) 726, 860, 1154, 1197, 1734, 1824, 2235
BssNI GRCGYC 1 cut(s) 1323
BssT1I CCWWGG 4 cut(s) 726, 860, 1734, 1824
Bst2UI CCWGG 2 cut(s) 280, 810
Bst6I CTCTTC 2 cut(s) 2880, 2955
BstACI GRCGYC 1 cut(s) 1323
BstBAI YACGTR 2 cut(s) 341, 1723
BstBI TTCGAA 2 cut(s) 1511, 2213
BstC8I GCNNGC 6 cut(s) 806, 899, 1382, 1567, 2131, 2944
BstDSI CCRYGG 3 cut(s) 860, 1824, 2235
BstEII GGTNACC 2 cut(s) 947, 1926
BstENI CCTNNNNNAGG 2 cut(s) 1153, 2465
BstF5I GGATG 8 cut(s) 734, 882, 1717, 1730, 1804, 1939, 2099, 2249
BstFNI CGCG 1 cut(s) 2237
BstHHI GCGC 1 cut(s) 2948
BstMAI GTCTC 8 cut(s) 2, 424, 511, 1423, 1494, 1604, 2251, 2828
BstNI CCWGG 2 cut(s) 280, 810
BstNSI RCATGY 8 cut(s) 147, 316, 524, 905, 1130, 1610, 2137, 2946
BstPAI GACNNNNGTC 1 cut(s) 1951
BstPI GGTNACC 2 cut(s) 947, 1926
BstSCI CCNGG 2 cut(s) 278, 808
BstSFI CTRYAG 5 cut(s) 186, 1245, 1755, 1908, 2389
BstSLI GKGCMC 2 cut(s) 2342, 2460
BstUI CGCG 1 cut(s) 2237
BstV1I GCAGC 8 cut(s) 32, 131, 436, 1549, 1556, 1957, 2740, 2743
BstV2I GAAGAC 4 cut(s) 92, 424, 1457, 2860
BstX2I RGATCY 5 cut(s) 282, 760, 1877, 2279, 2312
BstXI CCANNNNNNTGG 4 cut(s) 279, 960, 1130, 1476
BstYI RGATCY 5 cut(s) 282, 760, 1877, 2279, 2312
BsuRI GGCC 3 cut(s) 151, 1239, 2458
BtgI CCRYGG 3 cut(s) 860, 1824, 2235
BtrI CACGTC 2 cut(s) 434, 2180
BtsCI GGATG 8 cut(s) 734, 882, 1717, 1730, 1804, 1939, 2099, 2249
BtsI GCAGTG 1 cut(s) 1274
BtsIMutI CAGTG 6 cut(s) 459, 1274, 1283, 1515, 1662, 2398
BveI ACCTGC 2 cut(s) 1321, 2338
Cac8I GCNNGC 6 cut(s) 806, 899, 1382, 1567, 2131, 2944
CfoI GCGC 1 cut(s) 2948
Cfr13I GGNCC 4 cut(s) 910, 2401, 2456, 2457
Cfr42I CCGCGG 1 cut(s) 2238
CseI GACGC 2 cut(s) 1331, 2010
Csp6I GTAC 6 cut(s) 818, 1103, 2386, 2537, 2707, 2744
CviQI GTAC 6 cut(s) 818, 1103, 2386, 2537, 2707, 2744
DraI TTTAAA 1 cut(s) 1089
DrdI GACNNNNNNGTC 2 cut(s) 1285, 2574
DseDI GACNNNNNNGTC 2 cut(s) 1285, 2574
EaeI YGGCCR 1 cut(s) 1237
Eam1104I CTCTTC 2 cut(s) 2880, 2955
EarI CTCTTC 2 cut(s) 2880, 2955
Eco130I CCWWGG 4 cut(s) 726, 860, 1734, 1824
Eco24I GRGCYC 1 cut(s) 2460
Eco47I GGWCC 2 cut(s) 910, 2401
Eco88I CYCGRG 2 cut(s) 393, 1153
Eco91I GGTNACC 2 cut(s) 947, 1926
EcoNI CCTNNNNNAGG 2 cut(s) 1153, 2465
EcoO109I RGGNCCY 1 cut(s) 2457
EcoO65I GGTNACC 2 cut(s) 947, 1926
EcoRII CCWGG 2 cut(s) 278, 808
EcoT14I CCWWGG 4 cut(s) 726, 860, 1734, 1824
EcoT22I ATGCAT 1 cut(s) 2251
EcoT38I GRGCYC 1 cut(s) 2460
ErhI CCWWGG 4 cut(s) 726, 860, 1734, 1824
Esp3I CGTCTC 3 cut(s) 2, 424, 1423
FaqI GGGAC 2 cut(s) 251, 842
FbaI TGATCA 1 cut(s) 1936
FblI GTMKAC 1 cut(s) 2566
FokI GGATG 8 cut(s) 721, 889, 1717, 1724, 1811, 1946, 2086, 2236
FriOI GRGCYC 1 cut(s) 2460
FspBI CTAG 5 cut(s) 854, 1893, 2079, 2579, 2756
FspI TGCGCA 1 cut(s) 2947
GlaI GCGC 1 cut(s) 2947
GsaI CCCAGC 4 cut(s) 1134, 2328, 2448, 2530
GsuI CTGGAG 2 cut(s) 1764, 2899
HaeIII GGCC 3 cut(s) 151, 1239, 2458
HapII CCGG 4 cut(s) 975, 1022, 1931, 2687
HgaI GACGC 2 cut(s) 1331, 2010
HhaI GCGC 1 cut(s) 2948
Hin1I GRCGYC 1 cut(s) 1323
Hin6I GCGC 1 cut(s) 2946
HinP1I GCGC 1 cut(s) 2946
HincII GTYRAC 2 cut(s) 355, 1867
HindII GTYRAC 2 cut(s) 355, 1867
HpaI GTTAAC 1 cut(s) 1867
HpaII CCGG 4 cut(s) 975, 1022, 1931, 2687
HphI GGTGA 5 cut(s) 644, 959, 1405, 1920, 2828
Hpy166II GTNNAC 6 cut(s) 355, 679, 1103, 1867, 2340, 2567
Hpy8I GTNNAC 6 cut(s) 355, 679, 1103, 1867, 2340, 2567
Hpy99I CGWCG 1 cut(s) 417
HpyAV CCTTC 6 cut(s) 623, 1159, 1661, 1694, 2119, 2860
HpyCH4IV ACGT 6 cut(s) 340, 433, 870, 1722, 2052, 2179
HpySE526I ACGT 6 cut(s) 340, 433, 870, 1722, 2052, 2179
Hsp92I GRCGYC 1 cut(s) 1323
HspAI GCGC 1 cut(s) 2946
Kpn2I TCCGGA 2 cut(s) 974, 2686
Ksp22I TGATCA 1 cut(s) 1936
KspAI GTTAAC 1 cut(s) 1867
KspI CCGCGG 1 cut(s) 2238
LmnI GCTCC 5 cut(s) 686, 1377, 1802, 1984, 2803
Lsp1109I GCAGC 8 cut(s) 32, 131, 436, 1549, 1556, 1957, 2740, 2743
LweI GCATC 8 cut(s) 154, 740, 1120, 1702, 1739, 2258, 2431, 2955
MaeI CTAG 5 cut(s) 854, 1893, 2079, 2579, 2756
MaeII ACGT 6 cut(s) 340, 433, 870, 1722, 2052, 2179
MfeI CAATTG 2 cut(s) 2014, 2085
MflI RGATCY 5 cut(s) 282, 760, 1877, 2279, 2312
MhlI GDGCHC 4 cut(s) 92, 2342, 2460, 2823
MlsI TGGCCA 1 cut(s) 1239
MluNI TGGCCA 1 cut(s) 1239
MlyI GAGTC 6 cut(s) 383, 1630, 1961, 2296, 2504, 2850
MmeI TCCRAC 7 cut(s) 206, 239, 380, 1147, 1457, 1689, 2900
Mox20I TGGCCA 1 cut(s) 1239
Mph1103I ATGCAT 1 cut(s) 2251
MroI TCCGGA 2 cut(s) 974, 2686
MscI TGGCCA 1 cut(s) 1239
MseI TTAA 9 cut(s) 300, 1088, 1176, 1425, 1676, 1866, 2382, 2466, 2622
MslI CAYNNNNRTG 3 cut(s) 945, 1773, 2108
Msp20I TGGCCA 1 cut(s) 1239
MspA1I CMGCKG 2 cut(s) 1569, 2237
MspI CCGG 4 cut(s) 975, 1022, 1931, 2687
MspR9I CCNGG 2 cut(s) 280, 810
MunI CAATTG 2 cut(s) 2014, 2085
Mva1269I GAATGC 3 cut(s) 1972, 2251, 2734
MvaI CCWGG 2 cut(s) 280, 810
MvnI CGCG 1 cut(s) 2237
NcoI CCATGG 2 cut(s) 860, 1824
NlaIV GGNNCC 7 cut(s) 132, 284, 479, 609, 2403, 2458, 2459
NmeAIII GCCGAG 1 cut(s) 1222
NmuCI GTSAC 4 cut(s) 752, 947, 1287, 1926
NsbI TGCGCA 1 cut(s) 2947
NsiI ATGCAT 1 cut(s) 2251
NspI RCATGY 8 cut(s) 147, 316, 524, 905, 1130, 1610, 2137, 2946
NspV TTCGAA 2 cut(s) 1511, 2213
PaeI GCATGC 1 cut(s) 2946
PaeR7I CTCGAG 1 cut(s) 393
PciI ACATGT 1 cut(s) 312
PctI GAATGC 3 cut(s) 1972, 2251, 2734
PfoI TCCNGGA 1 cut(s) 278
PleI GAGTC 6 cut(s) 382, 1630, 1960, 2295, 2503, 2850
PpsI GAGTC 6 cut(s) 382, 1630, 1960, 2295, 2503, 2850
Ppu21I YACGTR 2 cut(s) 341, 1723
PscI ACATGT 1 cut(s) 312
PshAI GACNNNNGTC 1 cut(s) 1951
Psp6I CCWGG 2 cut(s) 278, 808
PspEI GGTNACC 2 cut(s) 947, 1926
PspFI CCCAGC 4 cut(s) 1130, 2324, 2444, 2526
PspGI CCWGG 2 cut(s) 278, 808
PspN4I GGNNCC 7 cut(s) 132, 284, 479, 609, 2403, 2458, 2459
PspOMI GGGCCC 1 cut(s) 2456
PspPI GGNCC 4 cut(s) 910, 2401, 2456, 2457
PspXI VCTCGAGB 1 cut(s) 393
PsrI GAACNNNNNNTAC 2 cut(s) 556, 588
PstI CTGCAG 3 cut(s) 190, 1249, 1912
PsuI RGATCY 5 cut(s) 282, 760, 1877, 2279, 2312
PvuII CAGCTG 1 cut(s) 1569
RsaI GTAC 6 cut(s) 819, 1104, 2387, 2538, 2708, 2745
RsaNI GTAC 6 cut(s) 818, 1103, 2386, 2537, 2707, 2744
RseI CAYNNNNRTG 3 cut(s) 945, 1773, 2108
SacII CCGCGG 1 cut(s) 2238
SaqAI TTAA 9 cut(s) 300, 1088, 1176, 1425, 1676, 1866, 2382, 2466, 2622
Sau96I GGNCC 4 cut(s) 910, 2401, 2456, 2457
ScaI AGTACT 2 cut(s) 2387, 2708
SchI GAGTC 6 cut(s) 383, 1630, 1961, 2296, 2504, 2850
ScrFI CCNGG 2 cut(s) 280, 810
SduI GDGCHC 4 cut(s) 92, 2342, 2460, 2823
SfaNI GCATC 8 cut(s) 154, 740, 1120, 1702, 1739, 2258, 2431, 2955
SfcI CTRYAG 5 cut(s) 186, 1245, 1755, 1908, 2389
Sfr274I CTCGAG 1 cut(s) 393
Sfr303I CCGCGG 1 cut(s) 2238
SfuI TTCGAA 2 cut(s) 1511, 2213
SgrBI CCGCGG 1 cut(s) 2238
SinI GGWCC 2 cut(s) 910, 2401
SlaI CTCGAG 1 cut(s) 393
SmiMI CAYNNNNRTG 3 cut(s) 945, 1773, 2108
SmlI CTYRAG 1 cut(s) 393
SmoI CTYRAG 1 cut(s) 393
SphI GCATGC 1 cut(s) 2946
SsiI CCGC 7 cut(s) 617, 1182, 1309, 1657, 1778, 2235, 2237
SspMI CTAG 5 cut(s) 854, 1893, 2079, 2579, 2756
StyD4I CCNGG 2 cut(s) 278, 808
StyI CCWWGG 4 cut(s) 726, 860, 1734, 1824
TaiI ACGT 6 cut(s) 343, 436, 873, 1725, 2055, 2182
TaqI TCGA 8 cut(s) 394, 1032, 1114, 1511, 1668, 2213, 2928, 2933
TaqII GACCGA 1 cut(s) 1602
TatI WGTACW 2 cut(s) 2385, 2706
TauI GCSGC 2 cut(s) 1781, 2240
Tru1I TTAA 9 cut(s) 300, 1088, 1176, 1425, 1676, 1866, 2382, 2466, 2622
Tru9I TTAA 9 cut(s) 300, 1088, 1176, 1425, 1676, 1866, 2382, 2466, 2622
TscAI CASTG 6 cut(s) 466, 1274, 1290, 1522, 1669, 2398
TseFI GTSAC 4 cut(s) 752, 947, 1287, 1926
TseI GCWGC 8 cut(s) 20, 119, 449, 1562, 1569, 1970, 2728, 2731
Tsp45I GTSAC 4 cut(s) 752, 947, 1287, 1926
TspGWI ACGGA 3 cut(s) 727, 2584, 2717
TspRI CASTG 6 cut(s) 466, 1274, 1290, 1522, 1669, 2398
VneI GTGCAC 1 cut(s) 2338
VpaK11BI GGWCC 2 cut(s) 910, 2401
XagI CCTNNNNNAGG 2 cut(s) 1153, 2465
XapI RAATTY 3 cut(s) 329, 577, 2305
XceI RCATGY 8 cut(s) 147, 316, 524, 905, 1130, 1610, 2137, 2946
XhoI CTCGAG 1 cut(s) 393
XmiI GTMKAC 1 cut(s) 2566
XspI CTAG 5 cut(s) 854, 1893, 2079, 2579, 2756
ZrmI AGTACT 2 cut(s) 2387, 2708
Zsp2I ATGCAT 1 cut(s) 2251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.