Rh5CG145700

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0003891
Physical Location & Seq
Forward (+)
13108200 .. 13112814
4615 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG145700.1

Sequence Viewer

Length: 2961 bp
ATGGTTCATTCTTCTAACAACAATCAGAGAAGTGATAACACAGTTGAGTGCTCTGGCAGTCCTCTAAGTCGAAAGATATCAGCTAGATGGGATCCAGATGAAGCATGCCGGCCTGTCATTGATGATGCACCTGTATTTTATCCAACTGCCGAGGAGTTCGAAAATACACTTGGTTACATAGCAGAGATTTGGCCACAGGCTGAATCTTATGGTATTTGTCGGATTGTCCCTCCACGTTCCTGGATCCCTCCTTGCCCTCTTAAAGAGAAAGACATGTGGGAAAATGCTAAATTCTCTACTCGTGTTCAGCAAGTTGACTTGCTTCAAAATAGAGAGTCCATGAAAAAGAAAACTAGAGGTCGGAAGCGAAAACGAAGAAGACACTCAAGGAGACGTGCAGAAGCTAATGCTGCTTCTGAGACCGATGAGAAGTTTGGGTTCCAGTCAGGATCAGACTTTACATTTGCAGAGTTTCAGAGACAAGCCTCTACTTTCAAGGAAAGTTACTTTGGAACACATGAATTTAAGGAGGGTTCAAATTCTGGTGGAACTAACAACAAAAGATGGGAACCCTCTGTGGAGGATATTGAAGGTGAATACTGGCGCATAGTAGAGCAACCAACAGATGAGGTTGAGGTTTACTATGGAGCTGACTTGGAAACAGGAGTGTTTGGAAGTGGGTTTCCCAAGGCATCGTCTGTGGTAACTAGGAGTGAGTCAGATCATTATGCAATGTCAGGCTGGAATCTAAATAACTTGCCTCGCTTGCCTGGTTCTGTACTATGTTTTGAGGAAAGCGATATCTCGGGAGTTCTAGTCCCATGGCTCTATGTTGGGATGTGCTTTTCTTCGTTTTGTTGGCATGTTGAGGACCACCACCTCTATTCCCTAAATTATCTACACTTCGGTGACCCAAAGGTATGGTATGGAGTGCCTGGAAGCCATGCTACCTCTTTGGAACAAGCAATGAGAAAGCATTTGCCGGATTTGTTTGAGGAACAACCTGATTTACTCAATGAACTGGTCACTCAGCTATCTCCTTCAGTTTTAAAGTCTGAGGGTGTACCTGTGCATCGAGCTATCCAACATTCTGGGGAGTTTGTTCTTACCTTTCCGAGGGCATATCATTCTGGATTTAATTGTGGCTTCAATTGTGCTGAGGCAGTAAATGTCGCCCCTGTTGACTGGTTGCAACATGGCCAAACTGCAGTTGAGCTTTACAGTAAGCAGTGCCGCAAGACGTCACTGTCACACGACAAATTGTTACTGGGGTCAGCTCTGGAAGCCGTGCAGGTCCTCGGGGAAATATCACTCGGAACAAAACTTATTACCAACCAGAGCTGGCAAAAAGTTTGTGGCAAAGATGGTGTGCTCACCAAAGCAGTTAAGAGACGAGTGGAGATGGAGGAGGAAAGACTGGATCGTCTTCCAATTTGTTGGAAGTCGCAAAAGATGGAAAGAGAATTTGATTCAAACACTGAGAGAGAATGCTTTTCTTGCTCCTATGACTTGCACTTATCTGCTGCCAGCTGCAACTGCTCTCCTGACCGATTTTCATGTCTTAAACATGCAAAGCATTTCTGTTCATGTGAAATGACTCAGAGATATGTCCTTCTCCGCTACAGTATTGAGGAATTAAATTTGCTGGTTAAAGCGTTGGAAGGGGAGTTGGATGCCATTCACGTATGGGCATCTAAGGATTCTGGAGTAGTTTCTATAGACTACACTCGTAAGTGCGCTGCTAAGAAGCCTAAGCTGGATCAAGATTCCAAGTCTTGCGATCCAATGGAAATTTTGCCAGTTTCACAAGATAAGGTTAACATGAATGGATCTTGCAGTTCCTCTAGTCCTGTTTCTTCTGCAGTAGTTCAGTCAGGATCACAGGATGGTCATAATGAAGATCAAACTTTGGCCGTGAATGCTGAGGCAAAGGTGGAGCATGATTGCAGTTTTGATTTGAATCTCAATTGTATGTCTGATGAACATGAAAGCAAGATAATTGACGTATCTGACGGCTGTGATAATAAGGCTAGTACAGTTGAGGAAGAGACATCCACATCAATGTCCAATCAAGAGAAGACTAGCACGTCTGAGGCTAATAAGTTGTTTGGTGTTGATCTTGGCTTATCACGTCCTGCTTCAAACATACCACCAATCAGTTCTTCACAAACTGAGATTGGCGATACCTCAGCTGTGAATGCATCCATGAGAGACCAAAGCTATCGATTAGGATGTTTGAGTGTTGTTGAGCCTTTGAATTTCGGAGCTGTCATGGCTGGGAAATATTGGTGCACTAAGCAGGCCATATATCCAAAAGGGTTTAGAAGCCGAGTTAATTTCTACAGTGTGCTGGACCCAACAAAACTGTGTAGTTATATATCAGAAGTTCTCGATGCTGGGCTTCTTGGACCCCTATTTAAGGTTAGTTTAGAAGAATTCCCAGATGAGGCTTTTGCAAATGTATCAGCAGACAAGTGCTGGGAGATGGTACTACATAGACTAAACAATGAAATAAGTAGACGGAGTAGTCTAGACGAAAGAGGGCCCCCTTTACAGTCTTTGCAGAGCATTAACGGGTTTGCAATGTTTGGCTTTCTCTCCCAACCTATTGTTGAGGCTATTGAGGCCCTTGATCCTGATCATCTATGCACAGAGTACTGGAATCACAGGTGTACGCAGCAGCATTCATCTGTACCAAGTTGCTCTCTAGGAGCGCCGCAGACAAAGCTATTTGGTATGAACATGACAAACAAGGAGCATAATCAACCATCTGTGGAGGGTCATCACTCAATCGATGAGATGCAGTTAGTTTTACGAAGACTCTTAGAGAAGGCGAATCCAAATCCCGAAGAGTTAAGGACATTACATAGAATGTTATCCAGTCAGTCAGCCGAAGCAAGAGTGGCATGCGCAGAATTGATTGAAGAGATGCAGAGAAATGTAGATAACAGGAAGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008214 GO:0008276 GO:0009314 GO:0009416 GO:0009555 GO:0009628 GO:0009648 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010154 GO:0010216 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016577 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032451 GO:0032452 GO:0032453 GO:0032501 GO:0032502 GO:0034641 GO:0034647 GO:0034720 GO:0034721 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0048229 GO:0048316 GO:0048519 GO:0048523 GO:0048573 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYRC FYRN JmjC JmjN zf-C5HC2

Protein Analysis

986

Amino Acids

110.7

Weight (kDa)

5.48

Isoelectric Point (pI)

55.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjN PF02375 44 - 77 8.2e-15 jmjN domain
JmjC PF02373 275 - 391 2.6e-46 JmjC domain, hydroxylase
zf-C5HC2 PF02928 497 - 547 1.8e-14 C5HC2 zinc finger
FYRN PF05964 752 - 798 1e-11 F/Y-rich N-terminus
FYRC PF05965 803 - 890 6e-21 F/Y rich C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 4 cut(s) 1246, 1422, 2086, 2526
AatII GACGTC 1 cut(s) 1244
Acc16I TGCGCA 1 cut(s) 2911
Acc36I ACCTGC 1 cut(s) 1282
AccI GTMKAC 1 cut(s) 2518
AciI CCGC 3 cut(s) 1234, 1618, 2717
AcoI YGGCCR 3 cut(s) 191, 1198, 1911
AcsI RAATTY 8 cut(s) 290, 521, 538, 1463, 1639, 1791, 2257, 2435
AcuI CTGAAG 1 cut(s) 1026
AcyI GRCGYC 1 cut(s) 1241
AfaI GTAC 7 cut(s) 780, 1065, 2035, 2490, 2657, 2674, 2694
AfiI CCNNNNNNNGG 3 cut(s) 1116, 2419, 2446
AflIII ACRYGT 1 cut(s) 273
AjiI CACGTC 3 cut(s) 395, 2088, 2132
AjnI CCWGG 3 cut(s) 239, 769, 934
AjuI GAANNNNNNNTTGG 6 cut(s) 153, 185, 492, 524, 2146, 2178
AleI CACNNNNGTG 1 cut(s) 906
Alw21I GWGCWC 3 cut(s) 53, 1374, 2294
Alw26I GTCTC 6 cut(s) 385, 413, 472, 1384, 2042, 2205
Alw44I GTGCAC 1 cut(s) 2290
Ama87I CYCGRG 2 cut(s) 805, 1298
AoxI GGCC 7 cut(s) 110, 191, 1198, 1911, 2301, 2543, 2625
ApaI GGGCCC 1 cut(s) 2547
ApaLI GTGCAC 1 cut(s) 2290
ApeKI GCWGC 6 cut(s) 410, 1523, 1530, 1739, 2677, 2680
ApoI RAATTY 8 cut(s) 290, 521, 538, 1463, 1639, 1791, 2257, 2435
ArsI GACNNNNNNTTYG 2 cut(s) 446, 478
AspLEI GCGC 4 cut(s) 606, 1739, 2716, 2912
AspS9I GGNCC 7 cut(s) 871, 1294, 2353, 2408, 2543, 2544, 2626
AsuHPI GGTGA 3 cut(s) 605, 920, 1366
AsuII TTCGAA 1 cut(s) 159
AvaI CYCGRG 2 cut(s) 805, 1298
AvaII GGWCC 4 cut(s) 871, 1294, 2353, 2408
BaeGI GKGCMC 2 cut(s) 2294, 2547
BalI TGGCCA 2 cut(s) 193, 1200
BamHI GGATCC 2 cut(s) 91, 243
BanII GRGCYC 1 cut(s) 2547
BarI GAAGNNNNNNTAC 2 cut(s) 931, 963
BauI CACGAG 1 cut(s) 300
BbsI GAAGAC 4 cut(s) 385, 1418, 2084, 2824
Bbv12I GWGCWC 3 cut(s) 53, 1374, 2294
BbvCI CCTCAGC 3 cut(s) 1158, 1923, 2188
BbvI GCAGC 6 cut(s) 397, 1510, 1517, 1726, 2689, 2692
BccI CCATC 8 cut(s) 81, 558, 1358, 1396, 1447, 1880, 2479, 2776
BceAI ACGGC 3 cut(s) 1271, 1898, 2029
BciT130I CCWGG 3 cut(s) 241, 771, 936
BclI TGATCA 1 cut(s) 2638
BcoDI GTCTC 6 cut(s) 385, 413, 472, 1384, 2042, 2205
BfaI CTAG 9 cut(s) 84, 354, 708, 815, 1845, 2031, 2082, 2531, 2708
BfmI CTRYAG 5 cut(s) 1206, 1621, 1716, 1860, 2341
BfoI RGCGCY 1 cut(s) 2717
BfuAI ACCTGC 1 cut(s) 1282
BisI GCNGC 8 cut(s) 411, 1234, 1524, 1531, 1740, 2678, 2681, 2717
BlsI GCNGC 8 cut(s) 412, 1235, 1525, 1532, 1741, 2679, 2682, 2718
BmcAI AGTACT 1 cut(s) 2657
Bme1390I CCNGG 3 cut(s) 241, 771, 936
Bme18I GGWCC 4 cut(s) 871, 1294, 2353, 2408
BmeT110I CYCGRG 2 cut(s) 805, 1298
BmgBI CACGTC 3 cut(s) 395, 2088, 2132
BmgT120I GGNCC 7 cut(s) 871, 1294, 2353, 2408, 2543, 2544, 2626
BmiI GGNNCC 8 cut(s) 93, 245, 440, 570, 2355, 2410, 2545, 2546
BmrFI CCNGG 3 cut(s) 241, 771, 936
BmrI ACTGGG 1 cut(s) 1277
BmsI GCATC 9 cut(s) 115, 701, 1081, 1663, 1700, 2210, 2383, 2790, 2919
BmuI ACTGGG 1 cut(s) 1277
BpiI GAAGAC 4 cut(s) 385, 1418, 2084, 2824
BpmI CTGGAG 1 cut(s) 1725
Bpu10I CCTNAGC 4 cut(s) 1158, 1752, 1923, 2188
Bpu14I TTCGAA 1 cut(s) 159
BpuEI CTTGAG 1 cut(s) 370
Bsa29I ATCGAT 2 cut(s) 2224, 2793
BsaAI YACGTR 1 cut(s) 1684
BsaBI GATNNNNATC 2 cut(s) 1959, 2637
BsaHI GRCGYC 1 cut(s) 1241
BsaI GGTCTC 2 cut(s) 413, 2205
BsaJI CCNNGG 5 cut(s) 150, 687, 821, 1115, 1297
BsaXI ACNNNNNCTCC 2 cut(s) 801, 831
Bsc4I CCNNNNNNNGG 3 cut(s) 1116, 2419, 2446
Bse118I RCCGGY 1 cut(s) 108
Bse1I ACTGG 9 cut(s) 442, 605, 1026, 1190, 1272, 1422, 1799, 2663, 2880
Bse3DI GCAATG 3 cut(s) 738, 972, 2589
Bse8I GATNNNNATC 2 cut(s) 1959, 2637
BseBI CCWGG 3 cut(s) 241, 771, 936
BseCI ATCGAT 2 cut(s) 2224, 2793
BseDI CCNNGG 5 cut(s) 150, 687, 821, 1115, 1297
BseGI GGATG 6 cut(s) 843, 1678, 1891, 2051, 2201, 2237
BseJI GATNNNNATC 2 cut(s) 1959, 2637
BseLI CCNNNNNNNGG 3 cut(s) 1116, 2419, 2446
BseMI GCAATG 3 cut(s) 738, 972, 2589
BseNI ACTGG 9 cut(s) 442, 605, 1026, 1190, 1272, 1422, 1799, 2663, 2880
BseRI GAGGAG 2 cut(s) 167, 1421
BseSI GKGCMC 2 cut(s) 2294, 2547
BseXI GCAGC 6 cut(s) 397, 1510, 1517, 1726, 2689, 2692
BseYI CCCAGC 3 cut(s) 2276, 2396, 2478
BsgI GTGCAG 2 cut(s) 417, 1310
BshFI GGCC 7 cut(s) 112, 193, 1200, 1913, 2303, 2545, 2627
BshVI ATCGAT 2 cut(s) 2224, 2793
BsiHKAI GWGCWC 3 cut(s) 53, 1374, 2294
BsiHKCI CYCGRG 2 cut(s) 805, 1298
BsiSI CCGG 2 cut(s) 109, 983
BslFI GGGAC 2 cut(s) 212, 803
BslI CCNNNNNNNGG 3 cut(s) 1116, 2419, 2446
BsmAI GTCTC 6 cut(s) 385, 413, 472, 1384, 2042, 2205
BsmBI CGTCTC 2 cut(s) 385, 1384
BsmFI GGGAC 2 cut(s) 212, 803
BsmI GAATGC 4 cut(s) 1493, 1924, 2203, 2683
BsnI GGCC 7 cut(s) 112, 193, 1200, 1913, 2303, 2545, 2627
Bso31I GGTCTC 2 cut(s) 413, 2205
BsoBI CYCGRG 2 cut(s) 805, 1298
Bsp119I TTCGAA 1 cut(s) 159
Bsp120I GGGCCC 1 cut(s) 2543
Bsp1286I GDGCHC 4 cut(s) 53, 1374, 2294, 2547
Bsp19I CCATGG 1 cut(s) 821
BspACI CCGC 3 cut(s) 1234, 1618, 2717
BspANI GGCC 7 cut(s) 112, 193, 1200, 1913, 2303, 2545, 2627
BspDI ATCGAT 2 cut(s) 2224, 2793
BspLI GGNNCC 8 cut(s) 93, 245, 440, 570, 2355, 2410, 2545, 2546
BspMAI CTGCAG 2 cut(s) 1210, 1864
BspMI ACCTGC 1 cut(s) 1282
BspT104I TTCGAA 1 cut(s) 159
BspTNI GGTCTC 2 cut(s) 413, 2205
BsrDI GCAATG 3 cut(s) 738, 972, 2589
BsrFI RCCGGY 1 cut(s) 108
BsrI ACTGG 9 cut(s) 442, 605, 1026, 1190, 1272, 1422, 1799, 2663, 2880
BssAI RCCGGY 1 cut(s) 108
BssECI CCNNGG 5 cut(s) 150, 687, 821, 1115, 1297
BssNI GRCGYC 1 cut(s) 1241
BssSI CACGAG 1 cut(s) 300
BssT1I CCWWGG 2 cut(s) 687, 821
Bst2BI CACGAG 1 cut(s) 300
Bst2UI CCWGG 3 cut(s) 241, 771, 936
Bst4CI ACNGT 8 cut(s) 43, 1223, 1248, 1625, 2038, 2345, 2367, 2556
Bst6I CTCTTC 3 cut(s) 2040, 2844, 2919
BstACI GRCGYC 1 cut(s) 1241
BstBAI YACGTR 1 cut(s) 1684
BstBI TTCGAA 1 cut(s) 159
BstC8I GCNNGC 7 cut(s) 106, 110, 767, 1343, 1528, 2301, 2908
BstDSI CCRYGG 1 cut(s) 821
BstEII GGTNACC 1 cut(s) 908
BstENI CCTNNNNNAGG 2 cut(s) 1114, 2417
BstF5I GGATG 6 cut(s) 843, 1678, 1891, 2051, 2201, 2237
BstH2I RGCGCY 1 cut(s) 2717
BstHHI GCGC 4 cut(s) 606, 1739, 2716, 2912
BstMAI GTCTC 6 cut(s) 385, 413, 472, 1384, 2042, 2205
BstNI CCWGG 3 cut(s) 241, 771, 936
BstNSI RCATGY 5 cut(s) 108, 277, 866, 1571, 2910
BstPI GGTNACC 1 cut(s) 908
BstSCI CCNGG 3 cut(s) 239, 769, 934
BstSFI CTRYAG 5 cut(s) 1206, 1621, 1716, 1860, 2341
BstSLI GKGCMC 2 cut(s) 2294, 2547
BstV1I GCAGC 6 cut(s) 397, 1510, 1517, 1726, 2689, 2692
BstV2I GAAGAC 4 cut(s) 385, 1418, 2084, 2824
BstX2I RGATCY 3 cut(s) 91, 243, 1829
BstXI CCANNNNNNTGG 4 cut(s) 240, 921, 1091, 1437
BstYI RGATCY 3 cut(s) 91, 243, 1829
Bsu15I ATCGAT 2 cut(s) 2224, 2793
BsuRI GGCC 7 cut(s) 112, 193, 1200, 1913, 2303, 2545, 2627
BsuTUI ATCGAT 2 cut(s) 2224, 2793
BtgI CCRYGG 1 cut(s) 821
BtrI CACGTC 3 cut(s) 395, 2088, 2132
BtsCI GGATG 6 cut(s) 843, 1678, 1891, 2051, 2201, 2237
BtsI GCAGTG 1 cut(s) 1235
BtsIMutI CAGTG 4 cut(s) 1235, 1244, 1476, 2350
BveI ACCTGC 1 cut(s) 1282
Cac8I GCNNGC 7 cut(s) 106, 110, 767, 1343, 1528, 2301, 2908
CfoI GCGC 4 cut(s) 606, 1739, 2716, 2912
Cfr10I RCCGGY 1 cut(s) 108
Cfr13I GGNCC 7 cut(s) 871, 1294, 2353, 2408, 2543, 2544, 2626
ClaI ATCGAT 2 cut(s) 2224, 2793
Csp6I GTAC 7 cut(s) 779, 1064, 2034, 2489, 2656, 2673, 2693
CviQI GTAC 7 cut(s) 779, 1064, 2034, 2489, 2656, 2673, 2693
DraI TTTAAA 1 cut(s) 1050
DrdI GACNNNNNNGTC 4 cut(s) 1246, 1422, 2086, 2526
DseDI GACNNNNNNGTC 4 cut(s) 1246, 1422, 2086, 2526
EaeI YGGCCR 3 cut(s) 191, 1198, 1911
Eam1104I CTCTTC 3 cut(s) 2040, 2844, 2919
EarI CTCTTC 3 cut(s) 2040, 2844, 2919
Eco130I CCWWGG 2 cut(s) 687, 821
Eco24I GRGCYC 1 cut(s) 2547
Eco31I GGTCTC 2 cut(s) 413, 2205
Eco32I GATATC 2 cut(s) 78, 802
Eco47I GGWCC 4 cut(s) 871, 1294, 2353, 2408
Eco57I CTGAAG 1 cut(s) 1026
Eco88I CYCGRG 2 cut(s) 805, 1298
Eco91I GGTNACC 1 cut(s) 908
EcoNI CCTNNNNNAGG 2 cut(s) 1114, 2417
EcoO109I RGGNCCY 4 cut(s) 1294, 2543, 2544, 2626
EcoO65I GGTNACC 1 cut(s) 908
EcoRI GAATTC 1 cut(s) 2435
EcoRII CCWGG 3 cut(s) 239, 769, 934
EcoRV GATATC 2 cut(s) 78, 802
EcoT14I CCWWGG 2 cut(s) 687, 821
EcoT22I ATGCAT 1 cut(s) 2203
EcoT38I GRGCYC 1 cut(s) 2547
ErhI CCWWGG 2 cut(s) 687, 821
Esp3I CGTCTC 2 cut(s) 385, 1384
FaqI GGGAC 2 cut(s) 212, 803
FbaI TGATCA 1 cut(s) 2638
FblI GTMKAC 1 cut(s) 2518
Fnu4HI GCNGC 8 cut(s) 411, 1234, 1524, 1531, 1740, 2678, 2681, 2717
FokI GGATG 6 cut(s) 850, 1685, 1898, 2038, 2188, 2244
FriOI GRGCYC 1 cut(s) 2547
Fsp4HI GCNGC 8 cut(s) 411, 1234, 1524, 1531, 1740, 2678, 2681, 2717
FspBI CTAG 9 cut(s) 84, 354, 708, 815, 1845, 2031, 2082, 2531, 2708
FspI TGCGCA 1 cut(s) 2911
GlaI GCGC 4 cut(s) 605, 1738, 2715, 2911
GluI GCNGC 8 cut(s) 411, 1234, 1524, 1531, 1740, 2678, 2681, 2717
GsaI CCCAGC 3 cut(s) 2280, 2400, 2482
GsuI CTGGAG 1 cut(s) 1725
HaeII RGCGCY 1 cut(s) 2717
HaeIII GGCC 7 cut(s) 112, 193, 1200, 1913, 2303, 2545, 2627
HapII CCGG 2 cut(s) 109, 983
HhaI GCGC 4 cut(s) 606, 1739, 2716, 2912
Hin1I GRCGYC 1 cut(s) 1241
Hin6I GCGC 4 cut(s) 604, 1737, 2714, 2910
HinP1I GCGC 4 cut(s) 604, 1737, 2714, 2910
HincII GTYRAC 3 cut(s) 316, 1183, 1819
HindII GTYRAC 3 cut(s) 316, 1183, 1819
HpaI GTTAAC 1 cut(s) 1819
HpaII CCGG 2 cut(s) 109, 983
HphI GGTGA 3 cut(s) 605, 920, 1366
Hpy166II GTNNAC 8 cut(s) 316, 640, 1064, 1183, 1819, 2292, 2519, 2673
Hpy8I GTNNAC 8 cut(s) 316, 640, 1064, 1183, 1819, 2292, 2519, 2673
HpyAV CCTTC 5 cut(s) 584, 1050, 1622, 1655, 2824
HpyCH4III ACNGT 8 cut(s) 43, 1223, 1248, 1625, 2038, 2345, 2367, 2556
HpyCH4IV ACGT 7 cut(s) 235, 394, 1241, 1683, 2004, 2087, 2131
HpySE526I ACGT 7 cut(s) 235, 394, 1241, 1683, 2004, 2087, 2131
Hsp92I GRCGYC 1 cut(s) 1241
HspAI GCGC 4 cut(s) 604, 1737, 2714, 2910
KroI GCCGGC 1 cut(s) 108
KroNI GCCGGC 1 cut(s) 110
Ksp22I TGATCA 1 cut(s) 2638
KspAI GTTAAC 1 cut(s) 1819
LmnI GCTCC 6 cut(s) 647, 1505, 1936, 2264, 2711, 2755
Lsp1109I GCAGC 6 cut(s) 397, 1510, 1517, 1726, 2689, 2692
LweI GCATC 9 cut(s) 115, 701, 1081, 1663, 1700, 2210, 2383, 2790, 2919
MaeI CTAG 9 cut(s) 84, 354, 708, 815, 1845, 2031, 2082, 2531, 2708
MaeII ACGT 7 cut(s) 235, 394, 1241, 1683, 2004, 2087, 2131
MaeIII GTNAC 8 cut(s) 173, 503, 703, 908, 1024, 1242, 1248, 1263
MfeI CAATTG 2 cut(s) 1150, 1966
MflI RGATCY 3 cut(s) 91, 243, 1829
MhlI GDGCHC 4 cut(s) 53, 1374, 2294, 2547
MlsI TGGCCA 2 cut(s) 193, 1200
MluNI TGGCCA 2 cut(s) 193, 1200
MlyI GAGTC 4 cut(s) 344, 725, 1591, 2814
MmeI TCCRAC 7 cut(s) 167, 200, 341, 1108, 1418, 1638, 1650
Mox20I TGGCCA 2 cut(s) 193, 1200
Mph1103I ATGCAT 1 cut(s) 2203
MroNI GCCGGC 1 cut(s) 108
MscI TGGCCA 2 cut(s) 193, 1200
MslI CAYNNNNRTG 2 cut(s) 906, 2060
Msp20I TGGCCA 2 cut(s) 193, 1200
MspA1I CMGCKG 2 cut(s) 1530, 2192
MspI CCGG 2 cut(s) 109, 983
MspR9I CCNGG 3 cut(s) 241, 771, 936
MunI CAATTG 2 cut(s) 1150, 1966
Mva1269I GAATGC 4 cut(s) 1493, 1924, 2203, 2683
MvaI CCWGG 3 cut(s) 241, 771, 936
NaeI GCCGGC 1 cut(s) 110
NcoI CCATGG 1 cut(s) 821
NgoMIV GCCGGC 1 cut(s) 108
NlaIV GGNNCC 8 cut(s) 93, 245, 440, 570, 2355, 2410, 2545, 2546
NmeAIII GCCGAG 2 cut(s) 175, 2354
NmuCI GTSAC 4 cut(s) 908, 1024, 1242, 1248
NsbI TGCGCA 1 cut(s) 2911
NsiI ATGCAT 1 cut(s) 2203
NspI RCATGY 5 cut(s) 108, 277, 866, 1571, 2910
NspV TTCGAA 1 cut(s) 159
OliI CACNNNNGTG 1 cut(s) 906
PaeI GCATGC 2 cut(s) 108, 2910
PciI ACATGT 1 cut(s) 273
PctI GAATGC 4 cut(s) 1493, 1924, 2203, 2683
PdiI GCCGGC 1 cut(s) 110
PfeI GAWTC 8 cut(s) 203, 745, 1469, 1700, 1766, 1960, 2662, 2836
PfoI TCCNGGA 1 cut(s) 239
PkrI GCNGC 8 cut(s) 412, 1235, 1525, 1532, 1741, 2679, 2682, 2718
PleI GAGTC 4 cut(s) 343, 724, 1591, 2814
PpsI GAGTC 4 cut(s) 343, 724, 1591, 2814
Ppu21I YACGTR 1 cut(s) 1684
PpuMI RGGWCCY 1 cut(s) 1294
PscI ACATGT 1 cut(s) 273
Psp5II RGGWCCY 1 cut(s) 1294
Psp6I CCWGG 3 cut(s) 239, 769, 934
PspEI GGTNACC 1 cut(s) 908
PspFI CCCAGC 3 cut(s) 2276, 2396, 2478
PspGI CCWGG 3 cut(s) 239, 769, 934
PspN4I GGNNCC 8 cut(s) 93, 245, 440, 570, 2355, 2410, 2545, 2546
PspOMI GGGCCC 1 cut(s) 2543
PspPI GGNCC 7 cut(s) 871, 1294, 2353, 2408, 2543, 2544, 2626
PspPPI RGGWCCY 1 cut(s) 1294
PstI CTGCAG 2 cut(s) 1210, 1864
PsuI RGATCY 3 cut(s) 91, 243, 1829
PvuII CAGCTG 2 cut(s) 1530, 2192
RsaI GTAC 7 cut(s) 780, 1065, 2035, 2490, 2657, 2674, 2694
RsaNI GTAC 7 cut(s) 779, 1064, 2034, 2489, 2656, 2673, 2693
RseI CAYNNNNRTG 2 cut(s) 906, 2060
SatI GCNGC 8 cut(s) 411, 1234, 1524, 1531, 1740, 2678, 2681, 2717
Sau96I GGNCC 7 cut(s) 871, 1294, 2353, 2408, 2543, 2544, 2626
ScaI AGTACT 1 cut(s) 2657
SchI GAGTC 4 cut(s) 344, 725, 1591, 2814
ScrFI CCNGG 3 cut(s) 241, 771, 936
SduI GDGCHC 4 cut(s) 53, 1374, 2294, 2547
SfaNI GCATC 9 cut(s) 115, 701, 1081, 1663, 1700, 2210, 2383, 2790, 2919
SfcI CTRYAG 5 cut(s) 1206, 1621, 1716, 1860, 2341
SfuI TTCGAA 1 cut(s) 159
SinI GGWCC 4 cut(s) 871, 1294, 2353, 2408
SmiMI CAYNNNNRTG 2 cut(s) 906, 2060
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
SphI GCATGC 2 cut(s) 108, 2910
SsiI CCGC 3 cut(s) 1234, 1618, 2717
SspI AATATT 1 cut(s) 2285
SspMI CTAG 9 cut(s) 84, 354, 708, 815, 1845, 2031, 2082, 2531, 2708
StyD4I CCNGG 3 cut(s) 239, 769, 934
StyI CCWWGG 2 cut(s) 687, 821
TaaI ACNGT 8 cut(s) 43, 1223, 1248, 1625, 2038, 2345, 2367, 2556
TaiI ACGT 7 cut(s) 238, 397, 1244, 1686, 2007, 2090, 2134
TaqI TCGA 6 cut(s) 70, 159, 1075, 2224, 2391, 2793
TaqII GACCGA 2 cut(s) 437, 1563
TatI WGTACW 3 cut(s) 778, 2033, 2655
TauI GCSGC 2 cut(s) 1236, 2719
TfiI GAWTC 8 cut(s) 203, 745, 1469, 1700, 1766, 1960, 2662, 2836
TscAI CASTG 4 cut(s) 1235, 1251, 1483, 2350
TseFI GTSAC 4 cut(s) 908, 1024, 1242, 1248
TseI GCWGC 6 cut(s) 410, 1523, 1530, 1739, 2677, 2680
Tsp45I GTSAC 4 cut(s) 908, 1024, 1242, 1248
TspGWI ACGGA 1 cut(s) 2536
TspRI CASTG 4 cut(s) 1235, 1251, 1483, 2350
VneI GTGCAC 1 cut(s) 2290
VpaK11BI GGWCC 4 cut(s) 871, 1294, 2353, 2408
XagI CCTNNNNNAGG 2 cut(s) 1114, 2417
XapI RAATTY 8 cut(s) 290, 521, 538, 1463, 1639, 1791, 2257, 2435
XbaI TCTAGA 1 cut(s) 2530
XceI RCATGY 5 cut(s) 108, 277, 866, 1571, 2910
XmiI GTMKAC 1 cut(s) 2518
XspI CTAG 9 cut(s) 84, 354, 708, 815, 1845, 2031, 2082, 2531, 2708
ZraI GACGTC 1 cut(s) 1242
ZrmI AGTACT 1 cut(s) 2657
Zsp2I ATGCAT 1 cut(s) 2203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.