FvH4_3g12300

DCD

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0003630
Physical Location & Seq
Reverse (-)
7273841 .. 7278781
4941 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g12300.t1

Sequence Viewer

Length: 3051 bp
ATGGAATCAGATGAGAAGCATAGTACTATTCAAGGAAAGTATCCCGGATGTGGTGCAATTTTTATGTCTAGCAGTTCTACAAAAGACGAGTGTTTTAGACGGAAACTGTTTGGGCTTCCATCTTTACAATGGCCATTTGTAAAGCGGGTAAAAAAGGGAATGATTTTGTTTCTCTTTGATTTTGAGAAAAAAGAACTTCATGGTGTATTCCAGGCGTGCTCTGATGGTGCAATGAATATTGTTCCCACTGCATGGAGTAGATCAGGAAAGAAGTTTCCTGCTCAGGTGAGAGTCTACCCAATTTGGCATTGTCATCCACTTCCAGAATCAGAATTTGGTGATGCAATCAATGCAAATTATTTTTCAAAAGGGAAATTTTATTTTGGTCTCTCCAAAGCTCAGGTTTGGAGGCTTCTAATGTTGTTTAATTTGAGAAAATTGAAAACTCCGCATCCTCAGAGAGCACTAGCCAGAAATACTGCTGCAAAACTGGTGGATCATAAGGACATTGATGACGAACTTGATGATGGCAGATTGTCAAGCGATAAAGTGGGTAATATACGTAAAGTGGACAATGAGTTTGGGTCCATCATTCGGAGAAGGTATCTTGAACAGTTGCCTGGCAAAGTTCAATGGGATGATGCTAAGTTTGGGAATGGAGTTAATGTGGATCTTGAACACAAGGCATTGCCATCAAATGAGCATACGAGGTCAGGCCAAAATGGAAGAGTCTATGGCAACCTGGCAATGTGTGGAAGGAAAGGAAGTGTCAGTGGTCCTTTTTATTCCGGAATGCCTCTTCAAGAAACATATTCTTCGGTTCAAGATCAAAAACCTTCTAGTTATCAGATGGAGCCAATCACTGGCTACTCTAATGCAGCATCTCGTGGAGATGCAATTATTAAGAGCATTCTTCCCTATGATCCTGATGATCCTGGTATGAACCTTGCATATTCTCAATTAGTTGGAGATTTTGATTCTGTTCAAGACTGTGAAGGCCGGAATGGAATTCCTTCCTCTTATCCTCTAAGTCCCAGTAATTATCCTTCCTTTCTGGTTGACCGCAGGCATCCTGTAGCAATACAAAATAAACCAGTGCATAAAATAGGACCATTTACTGCAAATGTAACTTCATCAGAGGAGATACAGTGCCAGTCACCATGCTGCAGCCATTCTGCTGACCTTAAGAGTGTGGACTACCACAAATGTACATGTTCGGATCATAAAATCTTTGATAGAATGCTGTGTTCAGATCGTCAGGAAAATAGAAGTAGTGTGTTCTCTCGCCTGAGATTGAATACCCCTGGATGGTGTCTGGAAAACCTTGGCCATCTTGGTCATGAGGAAAATGTTAATGACACATCATCAGTGGATGAAATCATGGCAATGTTGAGCGAGAGTCACGACTCCCAGATGGTGTCTGTAAAATCTAAACTGTGTAAGAGACAGCAAGGGAATGTAGGGAAGTTTAGGAATATAAAGCAGAATTCTGTGAAGTCTGAGTTTGAAATTATTCCAGAGAAGTCAAACACGACTTCTGCTTCACCAACTGGAGATAAAGATGATCAAAGCAGTAAAAACACACTGTTTTTGGACTTCAAGCGGCGGAGTCGCAAAGTCAATAGTGATACTAACGGGGAAAGTGCTGGAAGTGAGGGATTGGTAGTTGGGCAGTGCAAGAGTAGGAAGCTAATCAGGCCGAACTTCAGTGAGAATGAGCCACGTAGTTGTGAAGATGCCGGTGGCAAGAAAAGGAAGCTGGCCAAGTCGAATTCATCTCAGGAATCATCAGCACAATGTTCTATTGGTGAAGCTGCTGGTGGCAAGAGAAGGAAGCTGGCTAGGCCCAATTTTAGAGAAAATGAGTCATCCCTCATATCATGGCCACAATGTTCTGTTGGTGAAGATGCTGGTGGAAGTTGCGAGTCTTTTGTTGGAAGCCAAGGTAAGCCATCATTACAAGGTGCAGAATTTTCACACGAAAATGAGAAGATAGATACTGAATGTTTTTCTAAATATGAAAGAGAAATTGTAGAAGGAAATTTTGGGGGTTCTCCCAAAATTGGAGATGACAGTGGAAAGGAGTGTTTGCATGCCTATCCTGTAAATTCTTGTCTACACGTACAGGCATCAGTGGATGAATCTTCTTTTTCTGAAGATGCTGATCTCAAGAAGAAGCTAGATGGGCCAGAATTCAGAGAGAACGAGCTATTCCAAGTATCACCACATGAATGTTCTAGTGGTGAACTTGCTGGTGAAATTTATAAGGCATTGGTTGGAAGTCAAGAGAACATTGATGCTCAAAGATTTACGACATCTGAAATGGAAATTGAACCAGAAAGCTCTGGGGAATCTCACAAAATTGGAGATGAAAGTGGAAATCCTGTTGGCAGCCAAACTGCCATCATCCTTCCCAACCAGCTTGAGTCACCTCAACAGAAAGGATCCCAGAATAATGACTGGGAGGCTCCTCAGTTTGGAGATAAAGATGCAAGTGAGTACGATTTAAGAGAGAGAGAAATAGAAGTTCATCTAGAAAGCATTGTGGATTCTGTCAAAGGTGGAGATGAATATGGAATGGAGAGTGTGCAGGTTGTTGGTACGGTTATTCTTGGTGCACTGGAAAACTCTATACTTACCAGGCTGTCTGAAGACTTTCCCGAGACTGATCAGATGACTGTGCTAGAGTCGAAGATGCAACCTAAGACCAATTCCGGAACAAGTGATGGATTTTCTGAAATTGAAGGTGACACAGGCAGTGAACTGGAGGTGCTTCCTATAGTTGAACTTTGTGCAAACATAAACGCCTCTAATCGTGCAGATGGAAGTATGGTAAATAACCAACAAGGAGTCAATTCTGAGCAGTTGCAGGCGTCCTGCAACTCCAACAATCACAGATCACCTCAAGAGGATGGATCCAAGAATAATTTGGTGGAGAATATGGAGTTAGGCGTGAATGAGGCAATTGATGACACCCTAAGAGAAAACAAGAAGCTGTGGAGTATTTTAACAACTAGACTGCAGCTTCTTAGGAATGCAAAACAACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Dev_Cell_Death

Protein Analysis

1017

Amino Acids

112.44

Weight (kDa)

5.44

Isoelectric Point (pI)

53.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dev_Cell_Death PF10539 18 - 142 1.2e-47 Development and cell death domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2265
Acc36I ACCTGC 1 cut(s) 2581
AccB7I CCANNNNNTGG 2 cut(s) 252, 863
AccI GTMKAC 2 cut(s) 294, 2116
AccIII TCCGGA 2 cut(s) 788, 2714
AciI CCGC 5 cut(s) 145, 449, 1063, 1603, 1606
AclWI GGATC 9 cut(s) 504, 678, 917, 926, 1227, 2439, 2452, 2910, 2923
AcoI YGGCCR 4 cut(s) 131, 1327, 1761, 1883
AcuI CTGAAG 3 cut(s) 1690, 2175, 2670
AcyI GRCGYC 1 cut(s) 2873
AfaI GTAC 5 cut(s) 25, 1210, 2124, 2501, 2602
AfiI CCNNNNNNNGG 7 cut(s) 50, 252, 594, 863, 1308, 2063, 2477
AflII CTTAAG 1 cut(s) 1184
AflIII ACRYGT 2 cut(s) 1211, 2119
AjnI CCWGG 6 cut(s) 210, 619, 741, 934, 1303, 2639
AjuI GAANNNNNNNTTGG 4 cut(s) 318, 350, 2028, 2060
Alw21I GWGCWC 3 cut(s) 221, 466, 2620
Alw26I GTCTC 3 cut(s) 392, 1438, 2657
Alw44I GTGCAC 1 cut(s) 2616
AlwI GGATC 9 cut(s) 504, 678, 917, 926, 1227, 2439, 2452, 2910, 2923
Ama87I CYCGRG 1 cut(s) 2660
Aor13HI TCCGGA 2 cut(s) 788, 2714
AoxI GGCC 9 cut(s) 131, 715, 997, 1327, 1697, 1761, 1844, 1883, 2186
ApaLI GTGCAC 1 cut(s) 2616
ApeKI GCWGC 7 cut(s) 482, 878, 1164, 1167, 1814, 2391, 3022
ArsI GACNNNNNNTTYG 2 cut(s) 563, 595
Asp700I GAANNNNTTC 3 cut(s) 1012, 1512, 2655
AspS9I GGNCC 5 cut(s) 585, 776, 1109, 1845, 2186
AsuC2I CCSGG 1 cut(s) 45
AvaI CYCGRG 1 cut(s) 2660
AvaII GGWCC 3 cut(s) 585, 776, 1109
BaeGI GKGCMC 1 cut(s) 2620
BalI TGGCCA 4 cut(s) 133, 1329, 1763, 1885
BamHI GGATCC 2 cut(s) 2444, 2915
BarI GAAGNNNNNNTAC 2 cut(s) 1030, 1062
BauI CACGAG 1 cut(s) 885
BbsI GAAGAC 1 cut(s) 2658
Bbv12I GWGCWC 3 cut(s) 221, 466, 2620
BbvI GCAGC 7 cut(s) 469, 890, 1151, 1179, 1801, 2403, 3034
BciT130I CCWGG 6 cut(s) 212, 621, 743, 936, 1305, 2641
BciVI GTATCC 1 cut(s) 51
BclI TGATCA 2 cut(s) 1564, 2668
BcnI CCSGG 1 cut(s) 45
BcoDI GTCTC 3 cut(s) 392, 1438, 2657
BfaI CTAG 9 cut(s) 69, 467, 840, 1842, 2180, 2238, 2534, 2684, 3015
BfmI CTRYAG 4 cut(s) 1074, 1165, 2778, 3020
BfrI CTTAAG 1 cut(s) 1184
BfuAI ACCTGC 1 cut(s) 2581
BfuI GTATCC 1 cut(s) 51
BisI GCNGC 8 cut(s) 483, 879, 1165, 1168, 1604, 1815, 2392, 3023
BlsI GCNGC 8 cut(s) 484, 880, 1166, 1169, 1605, 1816, 2393, 3024
BmcAI AGTACT 1 cut(s) 25
Bme1390I CCNGG 7 cut(s) 45, 212, 621, 743, 936, 1305, 2641
Bme18I GGWCC 3 cut(s) 585, 776, 1109
BmeT110I CYCGRG 1 cut(s) 2660
BmgT120I GGNCC 5 cut(s) 585, 776, 1109, 1845, 2186
BmiI GGNNCC 5 cut(s) 586, 855, 2446, 2469, 2917
BmrFI CCNGG 7 cut(s) 45, 212, 621, 743, 936, 1305, 2641
BmrI ACTGGG 2 cut(s) 1029, 2470
BmuI ACTGGG 2 cut(s) 1029, 2470
BpiI GAAGAC 1 cut(s) 2658
BpmI CTGGAG 2 cut(s) 1572, 2786
Bpu10I CCTNAGC 2 cut(s) 282, 399
BpuEI CTTGAG 3 cut(s) 2153, 2444, 2889
BpuMI CCSGG 1 cut(s) 45
BsaAI YACGTR 3 cut(s) 563, 1724, 2122
BsaBI GATNNNNATC 1 cut(s) 2163
BsaHI GRCGYC 1 cut(s) 2873
BsaI GGTCTC 1 cut(s) 392
BsaJI CCNNGG 3 cut(s) 1303, 1324, 1942
BsaWI WCCGGW 2 cut(s) 788, 2714
BsaXI ACNNNNNCTCC 4 cut(s) 651, 681, 1133, 1163
Bsc4I CCNNNNNNNGG 7 cut(s) 50, 252, 594, 863, 1308, 2063, 2477
Bse118I RCCGGY 1 cut(s) 1739
Bse1I ACTGG 9 cut(s) 495, 868, 1035, 1094, 1153, 1555, 2465, 2625, 2769
Bse3DI GCAATG 4 cut(s) 237, 686, 753, 1392
Bse8I GATNNNNATC 1 cut(s) 2163
BseAI TCCGGA 2 cut(s) 788, 2714
BseBI CCWGG 6 cut(s) 212, 621, 743, 936, 1305, 2641
BseDI CCNNGG 3 cut(s) 1303, 1324, 1942
BseJI GATNNNNATC 1 cut(s) 2163
BseLI CCNNNNNNNGG 7 cut(s) 50, 252, 594, 863, 1308, 2063, 2477
BseMI GCAATG 4 cut(s) 237, 686, 753, 1392
BseMII CTCAG 8 cut(s) 296, 413, 470, 1280, 1491, 1793, 2486, 2850
BseNI ACTGG 9 cut(s) 495, 868, 1035, 1094, 1153, 1555, 2465, 2625, 2769
BseRI GAGGAG 2 cut(s) 1154, 2460
BseSI GKGCMC 1 cut(s) 2620
BseXI GCAGC 7 cut(s) 469, 890, 1151, 1179, 1801, 2403, 3034
BsgI GTGCAG 3 cut(s) 1986, 2609, 2838
BshFI GGCC 9 cut(s) 133, 717, 999, 1329, 1699, 1763, 1846, 1885, 2188
BsiHKAI GWGCWC 3 cut(s) 221, 466, 2620
BsiHKCI CYCGRG 1 cut(s) 2660
BsiSI CCGG 5 cut(s) 45, 789, 1000, 1740, 2715
BslFI GGGAC 1 cut(s) 1017
BslI CCNNNNNNNGG 7 cut(s) 50, 252, 594, 863, 1308, 2063, 2477
BsmAI GTCTC 3 cut(s) 392, 1438, 2657
BsmFI GGGAC 1 cut(s) 1017
BsmI GAATGC 4 cut(s) 798, 909, 1245, 3040
BsnI GGCC 9 cut(s) 133, 717, 999, 1329, 1699, 1763, 1846, 1885, 2188
Bso31I GGTCTC 1 cut(s) 392
BsoBI CYCGRG 1 cut(s) 2660
Bsp1286I GDGCHC 3 cut(s) 221, 466, 2620
Bsp13I TCCGGA 2 cut(s) 788, 2714
Bsp1407I TGTACA 1 cut(s) 1208
BspACI CCGC 5 cut(s) 145, 449, 1063, 1603, 1606
BspANI GGCC 9 cut(s) 133, 717, 999, 1329, 1699, 1763, 1846, 1885, 2188
BspCNI CTCAG 8 cut(s) 295, 412, 469, 1281, 1492, 1792, 2485, 2851
BspEI TCCGGA 2 cut(s) 788, 2714
BspHI TCATGA 1 cut(s) 1339
BspLI GGNNCC 5 cut(s) 586, 855, 2446, 2469, 2917
BspMAI CTGCAG 2 cut(s) 1169, 3024
BspMI ACCTGC 1 cut(s) 2581
BspPI GGATC 9 cut(s) 504, 678, 917, 926, 1227, 2439, 2452, 2910, 2923
BspTI CTTAAG 1 cut(s) 1184
BspTNI GGTCTC 1 cut(s) 392
BsrDI GCAATG 4 cut(s) 237, 686, 753, 1392
BsrFI RCCGGY 1 cut(s) 1739
BsrGI TGTACA 1 cut(s) 1208
BsrI ACTGG 9 cut(s) 495, 868, 1035, 1094, 1153, 1555, 2465, 2625, 2769
BssAI RCCGGY 1 cut(s) 1739
BssECI CCNNGG 3 cut(s) 1303, 1324, 1942
BssNI GRCGYC 1 cut(s) 2873
BssSI CACGAG 1 cut(s) 885
BssT1I CCWWGG 2 cut(s) 1324, 1942
Bst2BI CACGAG 1 cut(s) 885
Bst2UI CCWGG 6 cut(s) 212, 621, 743, 936, 1305, 2641
Bst4CI ACNGT 9 cut(s) 108, 615, 992, 1149, 1437, 1587, 2075, 2605, 2680
Bst6I CTCTTC 2 cut(s) 721, 804
BstACI GRCGYC 1 cut(s) 2873
BstAFI CTTAAG 1 cut(s) 1184
BstAPI GCANNNNNTGC 1 cut(s) 350
BstAUI TGTACA 1 cut(s) 1208
BstBAI YACGTR 3 cut(s) 563, 1724, 2122
BstC8I GCNNGC 6 cut(s) 217, 1067, 1761, 1839, 2094, 2871
BstMAI GTCTC 3 cut(s) 392, 1438, 2657
BstMWI GCNNNNNNNGC 4 cut(s) 350, 1696, 1843, 2185
BstNI CCWGG 6 cut(s) 212, 621, 743, 936, 1305, 2641
BstNSI RCATGY 2 cut(s) 1215, 2096
BstSCI CCNGG 7 cut(s) 43, 210, 619, 741, 934, 1303, 2639
BstSFI CTRYAG 4 cut(s) 1074, 1165, 2778, 3020
BstSLI GKGCMC 1 cut(s) 2620
BstSNI TACGTA 1 cut(s) 563
BstV1I GCAGC 7 cut(s) 469, 890, 1151, 1179, 1801, 2403, 3034
BstV2I GAAGAC 1 cut(s) 2658
BstX2I RGATCY 3 cut(s) 670, 2444, 2915
BstYI RGATCY 3 cut(s) 670, 2444, 2915
BsuI GTATCC 1 cut(s) 51
BsuRI GGCC 9 cut(s) 133, 717, 999, 1329, 1699, 1763, 1846, 1885, 2188
BtsI GCAGTG 3 cut(s) 246, 1679, 2764
BveI ACCTGC 1 cut(s) 2581
Cac8I GCNNGC 6 cut(s) 217, 1067, 1761, 1839, 2094, 2871
CciI TCATGA 1 cut(s) 1339
Cfr10I RCCGGY 1 cut(s) 1739
Cfr13I GGNCC 5 cut(s) 585, 776, 1109, 1845, 2186
CseI GACGC 1 cut(s) 2862
Csp6I GTAC 5 cut(s) 24, 1209, 2123, 2500, 2601
CspCI CAANNNNNGTGG 2 cut(s) 474, 509
CviAII CATG 9 cut(s) 200, 252, 1161, 1212, 1340, 1381, 1881, 2093, 2228
CviQI GTAC 5 cut(s) 24, 1209, 2123, 2500, 2601
EaeI YGGCCR 4 cut(s) 131, 1327, 1761, 1883
Eam1104I CTCTTC 2 cut(s) 721, 804
EarI CTCTTC 2 cut(s) 721, 804
EciI GGCGGA 1 cut(s) 1621
Eco105I TACGTA 1 cut(s) 563
Eco130I CCWWGG 2 cut(s) 1324, 1942
Eco31I GGTCTC 1 cut(s) 392
Eco47I GGWCC 3 cut(s) 585, 776, 1109
Eco57I CTGAAG 3 cut(s) 1690, 2175, 2670
Eco88I CYCGRG 1 cut(s) 2660
EcoRI GAATTC 4 cut(s) 1008, 1486, 1771, 2192
EcoRII CCWGG 6 cut(s) 210, 619, 741, 934, 1303, 2639
EcoT14I CCWWGG 2 cut(s) 1324, 1942
ErhI CCWWGG 2 cut(s) 1324, 1942
FaeI CATG 9 cut(s) 203, 255, 1164, 1215, 1343, 1384, 1884, 2096, 2231
FaqI GGGAC 1 cut(s) 1017
FatI CATG 9 cut(s) 199, 251, 1160, 1211, 1339, 1380, 1880, 2092, 2227
FauI CCCGC 1 cut(s) 138
FbaI TGATCA 2 cut(s) 1564, 2668
FblI GTMKAC 2 cut(s) 294, 2116
Fnu4HI GCNGC 8 cut(s) 483, 879, 1165, 1168, 1604, 1815, 2392, 3023
Fsp4HI GCNGC 8 cut(s) 483, 879, 1165, 1168, 1604, 1815, 2392, 3023
FspBI CTAG 9 cut(s) 69, 467, 840, 1842, 2180, 2238, 2534, 2684, 3015
GluI GCNGC 8 cut(s) 483, 879, 1165, 1168, 1604, 1815, 2392, 3023
GsuI CTGGAG 2 cut(s) 1572, 2786
HaeIII GGCC 9 cut(s) 133, 717, 999, 1329, 1699, 1763, 1846, 1885, 2188
HapII CCGG 5 cut(s) 45, 789, 1000, 1740, 2715
HgaI GACGC 1 cut(s) 2862
Hin1I GRCGYC 1 cut(s) 2873
Hin1II CATG 9 cut(s) 203, 255, 1164, 1215, 1343, 1384, 1884, 2096, 2231
HincII GTYRAC 1 cut(s) 1060
HindII GTYRAC 1 cut(s) 1060
HpaII CCGG 5 cut(s) 45, 789, 1000, 1740, 2715
Hpy166II GTNNAC 8 cut(s) 295, 571, 1060, 1195, 2117, 2246, 2618, 2762
Hpy8I GTNNAC 8 cut(s) 295, 571, 1060, 1195, 2117, 2246, 2618, 2762
HpyCH4III ACNGT 9 cut(s) 108, 615, 992, 1149, 1437, 1587, 2075, 2605, 2680
HpyCH4IV ACGT 3 cut(s) 562, 1723, 2121
HpyF10VI GCNNNNNNNGC 4 cut(s) 350, 1696, 1843, 2185
HpySE526I ACGT 3 cut(s) 562, 1723, 2121
Hsp92I GRCGYC 1 cut(s) 2873
Hsp92II CATG 9 cut(s) 203, 255, 1164, 1215, 1343, 1384, 1884, 2096, 2231
Kpn2I TCCGGA 2 cut(s) 788, 2714
Ksp22I TGATCA 2 cut(s) 1564, 2668
LmnI GCTCC 2 cut(s) 853, 2473
Lsp1109I GCAGC 7 cut(s) 469, 890, 1151, 1179, 1801, 2403, 3034
MaeI CTAG 9 cut(s) 69, 467, 840, 1842, 2180, 2238, 2534, 2684, 3015
MaeII ACGT 3 cut(s) 562, 1723, 2121
MaeIII GTNAC 5 cut(s) 1126, 1155, 1400, 2427, 2747
MfeI CAATTG 1 cut(s) 2964
MflI RGATCY 3 cut(s) 670, 2444, 2915
MhlI GDGCHC 3 cut(s) 221, 466, 2620
MlsI TGGCCA 4 cut(s) 133, 1329, 1763, 1885
MluNI TGGCCA 4 cut(s) 133, 1329, 1763, 1885
MmeI TCCRAC 4 cut(s) 946, 1915, 2257, 2910
Mox20I TGGCCA 4 cut(s) 133, 1329, 1763, 1885
MroI TCCGGA 2 cut(s) 788, 2714
MroXI GAANNNNTTC 3 cut(s) 1012, 1512, 2655
MscI TGGCCA 4 cut(s) 133, 1329, 1763, 1885
MseI TTAA 7 cut(s) 426, 663, 903, 1185, 1353, 2507, 3008
MslI CAYNNNNRTG 3 cut(s) 1385, 1983, 2230
Msp20I TGGCCA 4 cut(s) 133, 1329, 1763, 1885
MspCI CTTAAG 1 cut(s) 1184
MspI CCGG 5 cut(s) 45, 789, 1000, 1740, 2715
MspR9I CCNGG 7 cut(s) 45, 212, 621, 743, 936, 1305, 2641
MunI CAATTG 1 cut(s) 2964
Mva1269I GAATGC 4 cut(s) 798, 909, 1245, 3040
MvaI CCWGG 6 cut(s) 212, 621, 743, 936, 1305, 2641
MwoI GCNNNNNNNGC 4 cut(s) 350, 1696, 1843, 2185
NciI CCSGG 1 cut(s) 45
NlaIII CATG 9 cut(s) 203, 255, 1164, 1215, 1343, 1384, 1884, 2096, 2231
NlaIV GGNNCC 5 cut(s) 586, 855, 2446, 2469, 2917
NmuCI GTSAC 4 cut(s) 1155, 1400, 2427, 2747
NspI RCATGY 2 cut(s) 1215, 2096
PaeI GCATGC 1 cut(s) 2096
PagI TCATGA 1 cut(s) 1339
PciI ACATGT 1 cut(s) 1211
PctI GAATGC 4 cut(s) 798, 909, 1245, 3040
PdmI GAANNNNTTC 3 cut(s) 1012, 1512, 2655
PfeI GAWTC 7 cut(s) 5, 326, 977, 1784, 2141, 2351, 2549
PflMI CCANNNNNTGG 2 cut(s) 252, 863
PfoI TCCNGGA 1 cut(s) 43
PkrI GCNGC 8 cut(s) 484, 880, 1166, 1169, 1605, 1816, 2393, 3024
Ppu21I YACGTR 3 cut(s) 563, 1724, 2122
PscI ACATGT 1 cut(s) 1211
PsiI TTATAA 1 cut(s) 2265
Psp6I CCWGG 6 cut(s) 210, 619, 741, 934, 1303, 2639
PspGI CCWGG 6 cut(s) 210, 619, 741, 934, 1303, 2639
PspN4I GGNNCC 5 cut(s) 586, 855, 2446, 2469, 2917
PspPI GGNCC 5 cut(s) 585, 776, 1109, 1845, 2186
PstI CTGCAG 2 cut(s) 1169, 3024
PsuI RGATCY 3 cut(s) 670, 2444, 2915
RsaI GTAC 5 cut(s) 25, 1210, 2124, 2501, 2602
RsaNI GTAC 5 cut(s) 24, 1209, 2123, 2500, 2601
RseI CAYNNNNRTG 3 cut(s) 1385, 1983, 2230
SaqAI TTAA 7 cut(s) 426, 663, 903, 1185, 1353, 2507, 3008
SatI GCNGC 8 cut(s) 483, 879, 1165, 1168, 1604, 1815, 2392, 3023
Sau96I GGNCC 5 cut(s) 585, 776, 1109, 1845, 2186
ScaI AGTACT 1 cut(s) 25
ScrFI CCNGG 7 cut(s) 45, 212, 621, 743, 936, 1305, 2641
SduI GDGCHC 3 cut(s) 221, 466, 2620
SfcI CTRYAG 4 cut(s) 1074, 1165, 2778, 3020
SinI GGWCC 3 cut(s) 585, 776, 1109
SmiMI CAYNNNNRTG 3 cut(s) 1385, 1983, 2230
SmlI CTYRAG 4 cut(s) 1184, 2168, 2423, 2904
SmoI CTYRAG 4 cut(s) 1184, 2168, 2423, 2904
SnaBI TACGTA 1 cut(s) 563
SphI GCATGC 1 cut(s) 2096
SsiI CCGC 5 cut(s) 145, 449, 1063, 1603, 1606
SspI AATATT 1 cut(s) 238
SspMI CTAG 9 cut(s) 69, 467, 840, 1842, 2180, 2238, 2534, 2684, 3015
StyD4I CCNGG 7 cut(s) 43, 210, 619, 741, 934, 1303, 2639
StyI CCWWGG 2 cut(s) 1324, 1942
TaaI ACNGT 9 cut(s) 108, 615, 992, 1149, 1437, 1587, 2075, 2605, 2680
TaiI ACGT 3 cut(s) 565, 1726, 2124
TaqI TCGA 2 cut(s) 1769, 2690
TatI WGTACW 2 cut(s) 23, 1208
TauI GCSGC 1 cut(s) 1606
TfiI GAWTC 7 cut(s) 5, 326, 977, 1784, 2141, 2351, 2549
Tru1I TTAA 7 cut(s) 426, 663, 903, 1185, 1353, 2507, 3008
Tru9I TTAA 7 cut(s) 426, 663, 903, 1185, 1353, 2507, 3008
TseFI GTSAC 4 cut(s) 1155, 1400, 2427, 2747
TseI GCWGC 7 cut(s) 482, 878, 1164, 1167, 1814, 2391, 3022
Tsp45I GTSAC 4 cut(s) 1155, 1400, 2427, 2747
TspGWI ACGGA 1 cut(s) 115
Van91I CCANNNNNTGG 2 cut(s) 252, 863
Vha464I CTTAAG 1 cut(s) 1184
VneI GTGCAC 1 cut(s) 2616
VpaK11BI GGWCC 3 cut(s) 585, 776, 1109
XbaI TCTAGA 1 cut(s) 2533
XceI RCATGY 2 cut(s) 1215, 2096
XcmI CCANNNNNNNNNTGG 2 cut(s) 126, 2926
XmiI GTMKAC 2 cut(s) 294, 2116
XmnI GAANNNNTTC 3 cut(s) 1012, 1512, 2655
XspI CTAG 9 cut(s) 69, 467, 840, 1842, 2180, 2238, 2534, 2684, 3015
ZrmI AGTACT 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.