Rroxscaffold_1G00058090

DCD

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0003630
Physical Location & Seq
Forward (+)
79995504 .. 80000848
5345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00058090.1

Sequence Viewer

Length: 2949 bp
ATGGAGTCAGATGAGGAGCACAGGACTGTTCAAGGAATGTCTCCCGAATATGGTGCAATTTTCATGTCAAGCGGTTTTACAAAAGATGAATGTTTTAGACGAAGACTGTTTGGCCTTCCATCTGGACAAGGCCCATTTGTAAAGCAGATCAAAAGTGGAATGATTTTATTTCTCTTTGAATTTGAGAAAAGAGAACTCCATGGTGTATATCAGGCATCCTCTGATGGTACAATGAATATTGTTCCTAATGCATGGAGTAGATCAGGAAAGAAGTTTCCTGCTCAGGTGAGAGTCAACCCAATTTGGCGTTGTCATCCACTTCCAGAATCTGAGTTTGGTGATGCAATCAAAGAAAACTATTTTTCAAAATGGAAATTCAATTTTGGCCTTTCCAAAGCTCAGGTTTGGAGGCTTCTAATGTTGTTTAATTTGCGAAAATTGAAAAATCCACATCCTCAGAGAGCACTAGCTAGAAATACTGCTGCAAAACCGGTGGACATTTATCGAGAACTTGATGATGACAGATTCTCAAGTGATAAAGTGGGTAATCTACATAAAGTGGACAATACGCTTCGGTCGATCATCCAGAGAAGGTATCTTGAACACTTGCCAGGCCAAGTTGAAAGGGATGATGCTAAGTTTGGGAATGGAGTTAATGTGGATTTTGAACACAGGGCATTGCCATCAACTGAGTGTACTAGGCCAGGCCAAAATGGAAGATGTGATGGCAGCCTGGCAATGTGTGGAAGGGAAGGAAGTGTCAGTCACTTGGATGGTCCTTTTTATTCTGGAATGCCTCTTCAAGAAACATATTCTTTGGTTCAAGATAAAAAAACTTCTAGCCATCAGATGGAGCTGCCAATCACTGGCCACTCTTATGCAGCATCTCGTGGAGATGCAATTAATACGAGCATTCTTCCCTATGATCCTGATGATCCTAGTTTGAACCTTGCACACTCTCGATTAATTGGAAATTATGATTCTGTTCAAGACTGTGATGGCCAGAATGGCATTCCTGTGGTGAGGAATGAAGTAAATCCCTCGTACACAGAGACAAATGGACCAAATCAAAGCCTAGAAGACATTTCTAAGGTTGATGTTCGCAGATCACTGTCAGCCATCAATATTACTCCTTTTCCAGGGGCAGCATCTTCAGCAGAAATGGCTATTTACTATTCAAAGTCTTCTTTAGCTCCTGAATCTTTATCAGAATTTGGAAGTAACGGGAGGGACGGGCCTTGCTCTTATCCCCTTAGCCCCAGTAATTATCCTTCCTTTCTGGTTGACCGCAGGCATTCTGTAGCAATACAAAATAAACCAGTGCATGAAATAGGACCATTTACTGCAAATGTAACTTCATTAGAGGAGATACAGTGTCAGTCACCATGCCACACTCATTCTGCTGACCTTGAGAGTGTGGACTACCACGAATGTAAATGTTCTGATCATAAAATTTCTGATAGAATGCTGTGTTCAGATCTTCTGGAAAACAGAAGTAGTGTGTTCTCTCGCCTGAGATTCAATAACCCTGGATGGTGTCTGGAAAACCTTGGCCATCTTGGCCACGAGGAATATGTTAAAGACACGTCATCAGTGGATGAAGTCATGGAAATGTTGAGCGACAGTCACTACCCCTGGATGGAGTCTGAAAAATCTAAACTGCATAAGAGACGACAAGGTAATGTAGGGAAGTCTAGAAATTTGAAGCAGACTGCTGTGAAGTCTGAGTTGGAAATGATTCCAGAGAAGTCAAACACAGCTTCTGCTTCACCAACTGAAGATAAAGATGATCAAAGCAGTAACAAGACACTGTTTGTGGACTTCAAGCGGCGGAGTGAGTTGCGAAAAGTCGATAGCGATACTAATGGGGAAAGTGCTGGAAGTGGGGGATTGTTAGGTGGGCAGTCCAAGAGAAGGAAGTTAATCAGGCCGAACTTCAGTGAGAATGAGCCACGTGATAACAAAAGCTATAATAGAAGCCATTTTATGAATTTACCAGGATCAGCCCAAGAATGTCGTAGTTGTGAAGATGCTGATGCTGGTAGCAAGAGAAGGAAGCTGGCTAGGCCAAATTTCGGAGAAAATGAGTCATCCCTAGTATCCTCGCCACAATGTTCTGTTGGTGAAGATGCTGGTGGAAGTTGCGGGTCTTTTGTTGGAAGCCAAGATGCTAATTGTAAGAAGAAGTTAGTTGCGCCAGACTTCAGAGAGAATGAGCTATTCCAAGTGTCGCCACATGAATGTTCTAGTGGTGAATATTATGAGGGTCAAGCATCTTGCAACTCCAACCAGCATGATTCACTTAAACAGGAAGGGTTCGGGAATGACGTGCTGGAGGCTGTGGAGTTTGGTGATAATGTTGCAAGTGATTACACTTTGAGAGAAAGAGAAATAGACATTAAACTAGAAAGCTTTGTGGATTCTGTCAAAAGTGGAGATGAAAATGGAACGGAGAGCGTGCAGGTTGGTATTCTTAATGCACTGGAAGACTCTATACTTACCAGATCACTTCAAGAGCATGGAGGCGCCTCTAATAGTGCAGATGCAAGTATGGTAAATAACCAACAAGGAGTCAATTCTGAGCAGTTGCAGACGTCTTGCAACTCCAACAATCACAGATCATTTCAAGAGCATGGATCCAAACATAATGTGGAAGAGAGCATGGAGTTCGGCGATAATGAGGCAATTGATGACACTAACTTTTTTCTTGAAAGTTTTGGCTCTGACCTGAAATTCTTCTGCGCTTCTGCGTGGATTTGGAGAAGCATGAATCATGAATATGCTGTCTTTTGCGTAATTATCACCATTTTCTTGTCAAGCTTTGAGCTTCGGAAGCTTTTTTTGGAGCTTCTGCGGATAGATATGGAGTCTTTTGCTACTGATAGAGGCACTGGTCATCAGCTTCAGCAAAAGCAATTAACACCAATATCTGATTTTGCCATCCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Dev_Cell_Death

Protein Analysis

982

Amino Acids

109.74

Weight (kDa)

5.5

Isoelectric Point (pI)

51.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dev_Cell_Death PF10539 18 - 142 2.5e-48 Development and cell death domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2597
Acc36I ACCTGC 1 cut(s) 2452
AccB1I GGYRCC 1 cut(s) 2525
AccB7I CCANNNNNTGG 2 cut(s) 850, 866
AciI CCGC 6 cut(s) 72, 1288, 1828, 1831, 2145, 2854
AclWI GGATC 5 cut(s) 920, 929, 2008, 2631, 2644
AcoI YGGCCR 4 cut(s) 868, 1000, 1552, 1561
AcsI RAATTY 8 cut(s) 179, 374, 1211, 1452, 1699, 1990, 2071, 2732
AcuI CTGAAG 5 cut(s) 1137, 1797, 1921, 2188, 2888
AcvI CACGTG 1 cut(s) 1955
AcyI GRCGYC 2 cut(s) 2526, 2594
AfaI GTAC 3 cut(s) 229, 697, 1046
AfiI CCNNNNNNNGG 7 cut(s) 50, 850, 866, 1139, 1639, 1914, 2075
AflIII ACRYGT 1 cut(s) 1584
AgeI ACCGGT 1 cut(s) 490
AjiI CACGTC 2 cut(s) 1587, 2329
AjnI CCWGG 7 cut(s) 610, 703, 732, 1138, 1528, 1634, 1996
AjuI GAANNNNNNNTTGG 6 cut(s) 318, 350, 1712, 1744, 2825, 2857
Alw21I GWGCWC 2 cut(s) 21, 466
Alw26I GTCTC 3 cut(s) 45, 1046, 1663
AlwI GGATC 5 cut(s) 920, 929, 2008, 2631, 2644
AlwNI CAGNNNCTG 2 cut(s) 329, 1763
ApeKI GCWGC 5 cut(s) 482, 729, 856, 881, 1145
ApoI RAATTY 8 cut(s) 179, 374, 1211, 1452, 1699, 1990, 2071, 2732
AseI ATTAAT 2 cut(s) 903, 965
AsiGI ACCGGT 1 cut(s) 490
Asp700I GAANNNNTTC 2 cut(s) 1737, 2735
AspLEI GCGC 3 cut(s) 2197, 2528, 2744
AspS9I GGNCC 5 cut(s) 131, 776, 1061, 1235, 1334
AsuHPI GGTGA 9 cut(s) 298, 350, 1033, 1374, 1761, 2135, 2264, 2363, 2794
AvaII GGWCC 3 cut(s) 776, 1061, 1334
BalI TGGCCA 4 cut(s) 870, 1002, 1554, 1563
BamHI GGATCC 1 cut(s) 2636
BanI GGYRCC 1 cut(s) 2525
BarI GAAGNNNNNNTAC 4 cut(s) 1255, 1287, 2478, 2510
BauI CACGAG 2 cut(s) 888, 1565
BbrPI CACGTG 1 cut(s) 1955
BbsI GAAGAC 4 cut(s) 109, 1086, 1176, 2493
Bbv12I GWGCWC 2 cut(s) 21, 466
BbvI GCAGC 5 cut(s) 469, 741, 843, 893, 1157
BcgI CGANNNNNNTGC 4 cut(s) 35, 69, 2650, 2684
BciT130I CCWGG 7 cut(s) 612, 705, 734, 1140, 1530, 1636, 1998
BciVI GTATCC 1 cut(s) 2110
BclI TGATCA 2 cut(s) 1444, 1789
BcoDI GTCTC 3 cut(s) 45, 1046, 1663
BfmI CTRYAG 1 cut(s) 1299
BfoI RGCGCY 1 cut(s) 2529
BfuAI ACCTGC 1 cut(s) 2452
BfuI GTATCC 1 cut(s) 2110
BglI GCCNNNNNGGC 2 cut(s) 1008, 1560
BglII AGATCT 1 cut(s) 1477
BisI GCNGC 6 cut(s) 483, 730, 857, 882, 1146, 1829
BlsI GCNGC 6 cut(s) 484, 731, 858, 883, 1147, 1830
Bme1390I CCNGG 7 cut(s) 612, 705, 734, 1140, 1530, 1636, 1998
Bme18I GGWCC 3 cut(s) 776, 1061, 1334
BmgBI CACGTC 2 cut(s) 1587, 2329
BmgT120I GGNCC 5 cut(s) 131, 776, 1061, 1235, 1334
BmiI GGNNCC 2 cut(s) 2527, 2638
BmrFI CCNGG 7 cut(s) 612, 705, 734, 1140, 1530, 1636, 1998
BmrI ACTGGG 1 cut(s) 1254
BmuI ACTGGG 1 cut(s) 1254
BpiI GAAGAC 4 cut(s) 109, 1086, 1176, 2493
BpmI CTGGAG 1 cut(s) 2354
Bpu10I CCTNAGC 3 cut(s) 282, 399, 1253
BpuEI CTTGAG 2 cut(s) 514, 1430
BsaAI YACGTR 1 cut(s) 1955
BsaHI GRCGYC 2 cut(s) 2526, 2594
BsaJI CCNNGG 5 cut(s) 199, 1139, 1528, 1549, 1634
BsaWI WCCGGW 2 cut(s) 490, 2943
BsaXI ACNNNNNCTCC 4 cut(s) 642, 672, 1358, 1388
Bsc4I CCNNNNNNNGG 7 cut(s) 50, 850, 866, 1139, 1639, 1914, 2075
Bse118I RCCGGY 1 cut(s) 490
Bse1I ACTGG 5 cut(s) 871, 1260, 1319, 2487, 2896
Bse3DI GCAATG 2 cut(s) 677, 744
BseBI CCWGG 7 cut(s) 612, 705, 734, 1140, 1530, 1636, 1998
BseDI CCNNGG 5 cut(s) 199, 1139, 1528, 1549, 1634
BseLI CCNNNNNNNGG 7 cut(s) 50, 850, 866, 1139, 1639, 1914, 2075
BseMI GCAATG 2 cut(s) 677, 744
BseMII CTCAG 8 cut(s) 296, 321, 413, 470, 681, 1505, 1716, 2571
BseNI ACTGG 5 cut(s) 871, 1260, 1319, 2487, 2896
BseRI GAGGAG 2 cut(s) 29, 1379
BseXI GCAGC 5 cut(s) 469, 741, 843, 893, 1157
BsgI GTGCAG 2 cut(s) 2480, 2559
Bsh1285I CGRYCG 1 cut(s) 578
BshNI GGYRCC 1 cut(s) 2525
BshTI ACCGGT 1 cut(s) 490
BsiEI CGRYCG 1 cut(s) 578
BsiHKAI GWGCWC 2 cut(s) 21, 466
BsiSI CCGG 2 cut(s) 491, 2944
BslFI GGGAC 1 cut(s) 1244
BslI CCNNNNNNNGG 7 cut(s) 50, 850, 866, 1139, 1639, 1914, 2075
BsmAI GTCTC 3 cut(s) 45, 1046, 1663
BsmBI CGTCTC 1 cut(s) 1663
BsmFI GGGAC 1 cut(s) 1244
BsmI GAATGC 5 cut(s) 798, 912, 1011, 1294, 1470
Bsp1286I GDGCHC 2 cut(s) 21, 466
Bsp19I CCATGG 1 cut(s) 199
BspACI CCGC 6 cut(s) 72, 1288, 1828, 1831, 2145, 2854
BspCNI CTCAG 8 cut(s) 295, 322, 412, 469, 682, 1506, 1717, 2572
BspHI TCATGA 1 cut(s) 2773
BspLI GGNNCC 2 cut(s) 2527, 2638
BspMI ACCTGC 1 cut(s) 2452
BspPI GGATC 5 cut(s) 920, 929, 2008, 2631, 2644
BspT107I GGYRCC 1 cut(s) 2525
BsrDI GCAATG 2 cut(s) 677, 744
BsrFI RCCGGY 1 cut(s) 490
BsrI ACTGG 5 cut(s) 871, 1260, 1319, 2487, 2896
BssAI RCCGGY 1 cut(s) 490
BssECI CCNNGG 5 cut(s) 199, 1139, 1528, 1549, 1634
BssNI GRCGYC 2 cut(s) 2526, 2594
BssSI CACGAG 2 cut(s) 888, 1565
BssT1I CCWWGG 2 cut(s) 199, 1549
Bst2BI CACGAG 2 cut(s) 888, 1565
Bst2UI CCWGG 7 cut(s) 612, 705, 734, 1140, 1530, 1636, 1998
Bst4CI ACNGT 7 cut(s) 28, 108, 995, 1113, 1374, 1625, 1812
Bst6I CTCTTC 2 cut(s) 804, 2649
BstACI GRCGYC 2 cut(s) 2526, 2594
BstBAI YACGTR 1 cut(s) 1955
BstC8I GCNNGC 3 cut(s) 1292, 2061, 2459
BstDSI CCRYGG 1 cut(s) 199
BstENI CCTNNNNNAGG 1 cut(s) 1137
BstH2I RGCGCY 1 cut(s) 2529
BstHHI GCGC 3 cut(s) 2197, 2528, 2744
BstMAI GTCTC 3 cut(s) 45, 1046, 1663
BstMCI CGRYCG 1 cut(s) 578
BstMWI GCNNNNNNNGC 6 cut(s) 1008, 1154, 1163, 1560, 2065, 2833
BstNI CCWGG 7 cut(s) 612, 705, 734, 1140, 1530, 1636, 1998
BstSCI CCNGG 7 cut(s) 610, 703, 732, 1138, 1528, 1634, 1996
BstSFI CTRYAG 1 cut(s) 1299
BstV1I GCAGC 5 cut(s) 469, 741, 843, 893, 1157
BstV2I GAAGAC 4 cut(s) 109, 1086, 1176, 2493
BstX2I RGATCY 2 cut(s) 1477, 2636
BstYI RGATCY 2 cut(s) 1477, 2636
BsuI GTATCC 1 cut(s) 2110
BtgI CCRYGG 1 cut(s) 199
BtrI CACGTC 2 cut(s) 1587, 2329
BtsIMutI CAGTG 9 cut(s) 864, 1109, 1326, 1379, 1599, 1808, 1945, 2480, 2889
BveI ACCTGC 1 cut(s) 2452
Cac8I GCNNGC 3 cut(s) 1292, 2061, 2459
CaiI CAGNNNCTG 2 cut(s) 329, 1763
CciI TCATGA 1 cut(s) 2773
CfoI GCGC 3 cut(s) 2197, 2528, 2744
Cfr10I RCCGGY 1 cut(s) 490
Cfr13I GGNCC 5 cut(s) 131, 776, 1061, 1235, 1334
Csp6I GTAC 3 cut(s) 228, 696, 1045
CspAI ACCGGT 1 cut(s) 490
CspCI CAANNNNNGTGG 2 cut(s) 474, 509
CviQI GTAC 3 cut(s) 228, 696, 1045
DinI GGCGCC 1 cut(s) 2527
EaeI YGGCCR 4 cut(s) 868, 1000, 1552, 1561
Eam1104I CTCTTC 2 cut(s) 804, 2649
EarI CTCTTC 2 cut(s) 804, 2649
EciI GGCGGA 1 cut(s) 1846
Eco130I CCWWGG 2 cut(s) 199, 1549
Eco47I GGWCC 3 cut(s) 776, 1061, 1334
Eco57I CTGAAG 5 cut(s) 1137, 1797, 1921, 2188, 2888
Eco72I CACGTG 1 cut(s) 1955
EcoNI CCTNNNNNAGG 1 cut(s) 1137
EcoRII CCWGG 7 cut(s) 610, 703, 732, 1138, 1528, 1634, 1996
EcoT14I CCWWGG 2 cut(s) 199, 1549
EcoT22I ATGCAT 1 cut(s) 253
EgeI GGCGCC 1 cut(s) 2527
EheI GGCGCC 1 cut(s) 2527
ErhI CCWWGG 2 cut(s) 199, 1549
Esp3I CGTCTC 1 cut(s) 1663
FaqI GGGAC 1 cut(s) 1244
FauI CCCGC 1 cut(s) 2138
FbaI TGATCA 2 cut(s) 1444, 1789
Fnu4HI GCNGC 6 cut(s) 483, 730, 857, 882, 1146, 1829
Fsp4HI GCNGC 6 cut(s) 483, 730, 857, 882, 1146, 1829
GlaI GCGC 3 cut(s) 2196, 2527, 2743
GluI GCNGC 6 cut(s) 483, 730, 857, 882, 1146, 1829
GsuI CTGGAG 1 cut(s) 2354
HaeII RGCGCY 1 cut(s) 2529
HapII CCGG 2 cut(s) 491, 2944
HhaI GCGC 3 cut(s) 2197, 2528, 2744
Hin1I GRCGYC 2 cut(s) 2526, 2594
Hin6I GCGC 3 cut(s) 2195, 2526, 2742
HinP1I GCGC 3 cut(s) 2195, 2526, 2742
HincII GTYRAC 2 cut(s) 295, 1285
HindII GTYRAC 2 cut(s) 295, 1285
HindIII AAGCTT 3 cut(s) 2410, 2818, 2834
HpaII CCGG 2 cut(s) 491, 2944
HphI GGTGA 9 cut(s) 298, 350, 1033, 1374, 1761, 2135, 2264, 2363, 2794
Hpy166II GTNNAC 8 cut(s) 295, 496, 562, 696, 1047, 1285, 1420, 1819
Hpy8I GTNNAC 8 cut(s) 295, 496, 562, 696, 1047, 1285, 1420, 1819
HpyAV CCTTC 8 cut(s) 125, 585, 741, 746, 1281, 1908, 2046, 2306
HpyCH4III ACNGT 7 cut(s) 28, 108, 995, 1113, 1374, 1625, 1812
HpyCH4IV ACGT 4 cut(s) 1586, 1954, 2328, 2594
HpyF10VI GCNNNNNNNGC 6 cut(s) 1008, 1154, 1163, 1560, 2065, 2833
HpySE526I ACGT 4 cut(s) 1586, 1954, 2328, 2594
Hsp92I GRCGYC 2 cut(s) 2526, 2594
HspAI GCGC 3 cut(s) 2195, 2526, 2742
KasI GGCGCC 1 cut(s) 2525
Ksp22I TGATCA 2 cut(s) 1444, 1789
LmnI GCTCC 4 cut(s) 16, 853, 1198, 2845
Lsp1109I GCAGC 5 cut(s) 469, 741, 843, 893, 1157
MaeII ACGT 4 cut(s) 1586, 1954, 2328, 2594
MaeIII GTNAC 6 cut(s) 764, 1220, 1351, 1380, 1625, 1799
MfeI CAATTG 1 cut(s) 2685
MflI RGATCY 2 cut(s) 1477, 2636
MhlI GDGCHC 2 cut(s) 21, 466
MlsI TGGCCA 4 cut(s) 870, 1002, 1554, 1563
MluNI TGGCCA 4 cut(s) 870, 1002, 1554, 1563
Mly113I GGCGCC 1 cut(s) 2526
MlyI GAGTC 7 cut(s) 14, 300, 1652, 2096, 2483, 2580, 2876
MmeI TCCRAC 4 cut(s) 1710, 2137, 2310, 2631
Mox20I TGGCCA 4 cut(s) 870, 1002, 1554, 1563
Mph1103I ATGCAT 1 cut(s) 253
MroXI GAANNNNTTC 2 cut(s) 1737, 2735
MscI TGGCCA 4 cut(s) 870, 1002, 1554, 1563
MslI CAYNNNNRTG 6 cut(s) 771, 876, 1016, 1610, 2239, 2778
Msp20I TGGCCA 4 cut(s) 870, 1002, 1554, 1563
MspI CCGG 2 cut(s) 491, 2944
MspR9I CCNGG 7 cut(s) 612, 705, 734, 1140, 1530, 1636, 1998
MunI CAATTG 1 cut(s) 2685
Mva1269I GAATGC 5 cut(s) 798, 912, 1011, 1294, 1470
MvaI CCWGG 7 cut(s) 612, 705, 734, 1140, 1530, 1636, 1998
MwoI GCNNNNNNNGC 6 cut(s) 1008, 1154, 1163, 1560, 2065, 2833
NarI GGCGCC 1 cut(s) 2526
NcoI CCATGG 1 cut(s) 199
NlaIV GGNNCC 2 cut(s) 2527, 2638
NmuCI GTSAC 3 cut(s) 764, 1380, 1625
NsiI ATGCAT 1 cut(s) 253
PagI TCATGA 1 cut(s) 2773
PcsI WCGNNNNNNNCGW 2 cut(s) 575, 2325
PctI GAATGC 5 cut(s) 798, 912, 1011, 1294, 1470
PdmI GAANNNNTTC 2 cut(s) 1737, 2735
PfeI GAWTC 9 cut(s) 326, 525, 980, 1199, 1518, 1738, 2297, 2420, 2770
PflMI CCANNNNNTGG 2 cut(s) 850, 866
PinAI ACCGGT 1 cut(s) 490
PkrI GCNGC 6 cut(s) 484, 731, 858, 883, 1147, 1830
PleI GAGTC 7 cut(s) 13, 299, 1651, 2095, 2483, 2579, 2875
PluTI GGCGCC 1 cut(s) 2529
PmaCI CACGTG 1 cut(s) 1955
PmlI CACGTG 1 cut(s) 1955
PpsI GAGTC 7 cut(s) 13, 299, 1651, 2095, 2483, 2579, 2875
Ppu21I YACGTR 1 cut(s) 1955
PshBI ATTAAT 2 cut(s) 903, 965
Psp6I CCWGG 7 cut(s) 610, 703, 732, 1138, 1528, 1634, 1996
PspCI CACGTG 1 cut(s) 1955
PspGI CCWGG 7 cut(s) 610, 703, 732, 1138, 1528, 1634, 1996
PspN4I GGNNCC 2 cut(s) 2527, 2638
PspPI GGNCC 5 cut(s) 131, 776, 1061, 1235, 1334
PstNI CAGNNNCTG 2 cut(s) 329, 1763
PsuI RGATCY 2 cut(s) 1477, 2636
RsaI GTAC 3 cut(s) 229, 697, 1046
RsaNI GTAC 3 cut(s) 228, 696, 1045
RseI CAYNNNNRTG 6 cut(s) 771, 876, 1016, 1610, 2239, 2778
SatI GCNGC 6 cut(s) 483, 730, 857, 882, 1146, 1829
Sau96I GGNCC 5 cut(s) 131, 776, 1061, 1235, 1334
SchI GAGTC 7 cut(s) 14, 300, 1652, 2096, 2483, 2580, 2876
ScrFI CCNGG 7 cut(s) 612, 705, 734, 1140, 1530, 1636, 1998
SduI GDGCHC 2 cut(s) 21, 466
SfcI CTRYAG 1 cut(s) 1299
SfiI GGCCNNNNNGGCC 1 cut(s) 1560
SfoI GGCGCC 1 cut(s) 2527
SinI GGWCC 3 cut(s) 776, 1061, 1334
SmiMI CAYNNNNRTG 6 cut(s) 771, 876, 1016, 1610, 2239, 2778
SmlI CTYRAG 2 cut(s) 529, 1409
SmoI CTYRAG 2 cut(s) 529, 1409
SsiI CCGC 6 cut(s) 72, 1288, 1828, 1831, 2145, 2854
SspDI GGCGCC 1 cut(s) 2525
SspI AATATT 3 cut(s) 238, 1126, 2258
StyD4I CCNGG 7 cut(s) 610, 703, 732, 1138, 1528, 1634, 1996
StyI CCWWGG 2 cut(s) 199, 1549
TaaI ACNGT 7 cut(s) 28, 108, 995, 1113, 1374, 1625, 1812
TaiI ACGT 4 cut(s) 1589, 1957, 2331, 2597
TaqI TCGA 4 cut(s) 505, 578, 961, 1851
TaqII GACCGA 1 cut(s) 564
TatI WGTACW 1 cut(s) 695
TauI GCSGC 1 cut(s) 1831
TfiI GAWTC 9 cut(s) 326, 525, 980, 1199, 1518, 1738, 2297, 2420, 2770
TscAI CASTG 9 cut(s) 871, 1116, 1326, 1379, 1599, 1815, 1945, 2487, 2896
TseFI GTSAC 3 cut(s) 764, 1380, 1625
TseI GCWGC 5 cut(s) 482, 729, 856, 881, 1145
Tsp45I GTSAC 3 cut(s) 764, 1380, 1625
TspGWI ACGGA 1 cut(s) 2465
TspRI CASTG 9 cut(s) 871, 1116, 1326, 1379, 1599, 1815, 1945, 2487, 2896
Van91I CCANNNNNTGG 2 cut(s) 850, 866
VpaK11BI GGWCC 3 cut(s) 776, 1061, 1334
VspI ATTAAT 2 cut(s) 903, 965
XagI CCTNNNNNAGG 1 cut(s) 1137
XapI RAATTY 8 cut(s) 179, 374, 1211, 1452, 1699, 1990, 2071, 2732
XbaI TCTAGA 1 cut(s) 1694
XcmI CCANNNNNNNNNTGG 1 cut(s) 2647
XmnI GAANNNNTTC 2 cut(s) 1737, 2735
ZraI GACGTC 1 cut(s) 2595
Zsp2I ATGCAT 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.