PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35050 AT2G35050 |
| fragaria_vesca | FvH4_3g12590 FvH4_3g12590 FvH4_3g12590 |
| malus_domestica | MD05G1249500.v1.1 MD10G1168200.v1.1 MD10G1229900.v1.1 |
| prunus_persica | Prupe.4G114600_v2.0.a1 Prupe.4G114600_v2.0.a1 |
| pyrus_communis | pycom05g22660 pycom05g22670 pycom10g19340 pycom10g19350 |
| rosa_chinensis | RchiOBHm_Chr2g0086691 RchiOBHm_Chr5g0020551 |
| rosa_laevigata | RLG00000032538 |
| rosa_multiflora | Rmu_sc0004626.1_g000009 Rmu_sc0009745.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057740 Rroxscaffold_4G00315010 |
| rosa_rugosa | Rorug01G0468600 Rorug05G0060400 Rorug05G0060500 Rorug05G0060600 Rorug05G0060600 |
| rosa_samantha | Rh2AG020600 Rh2BG020400 Rh5AG151100 Rh5BG150500 Rh5CG162000 Rh5DG149900 |
| rosa_wichuraiana | Rw5G013370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2943 |
| AarI | CACCTGC | 1 cut(s) | 2968 |
| Acc36I | ACCTGC | 1 cut(s) | 2968 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1643, 2633 |
| AccI | GTMKAC | 1 cut(s) | 2175 |
| AccII | CGCG | 1 cut(s) | 1972 |
| AccIII | TCCGGA | 3 cut(s) | 163, 690, 2697 |
| AciI | CCGC | 9 cut(s) | 286, 941, 1163, 1970, 2774, 2919, 3271, 3913, 3944 |
| AclI | AACGTT | 1 cut(s) | 2020 |
| AcoI | YGGCCR | 3 cut(s) | 922, 2263, 3357 |
| AcsI | RAATTY | 9 cut(s) | 266, 278, 430, 1000, 1762, 2399, 2701, 2717, 3282 |
| AcuI | CTGAAG | 8 cut(s) | 555, 1008, 1101, 1272, 1677, 1797, 1887, 2370 |
| AcyI | GRCGYC | 1 cut(s) | 3828 |
| AdeI | CACNNNGTG | 1 cut(s) | 3062 |
| AfaI | GTAC | 8 cut(s) | 11, 513, 1102, 1108, 1113, 2220, 3333, 3813 |
| AfeI | AGCGCT | 1 cut(s) | 2328 |
| AflIII | ACRYGT | 1 cut(s) | 680 |
| AhlI | ACTAGT | 2 cut(s) | 1103, 2170 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1648, 1680 |
| AleI | CACNNNNGTG | 1 cut(s) | 3050 |
| Alw21I | GWGCWC | 3 cut(s) | 2532, 2800, 3504 |
| Alw26I | GTCTC | 4 cut(s) | 1221, 1697, 2148, 2292 |
| Alw44I | GTGCAC | 1 cut(s) | 3500 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 733 |
| Aor13HI | TCCGGA | 3 cut(s) | 163, 690, 2697 |
| Aor51HI | AGCGCT | 1 cut(s) | 2328 |
| AoxI | GGCC | 8 cut(s) | 373, 872, 922, 2263, 2706, 3357, 3803, 3861 |
| ApaI | GGGCCC | 1 cut(s) | 3865 |
| ApaLI | GTGCAC | 1 cut(s) | 3500 |
| ApoI | RAATTY | 9 cut(s) | 266, 278, 430, 1000, 1762, 2399, 2701, 2717, 3282 |
| AseI | ATTAAT | 1 cut(s) | 2553 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1518 |
| AspA2I | CCTAGG | 2 cut(s) | 875, 985 |
| AspLEI | GCGC | 2 cut(s) | 2329, 3234 |
| AspS9I | GGNCC | 6 cut(s) | 2707, 2752, 2912, 3341, 3861, 3862 |
| AsuC2I | CCSGG | 2 cut(s) | 780, 3229 |
| AsuII | TTCGAA | 1 cut(s) | 1600 |
| AvaII | GGWCC | 3 cut(s) | 2752, 2912, 3341 |
| AvrII | CCTAGG | 2 cut(s) | 875, 985 |
| AxyI | CCTNAGG | 1 cut(s) | 2958 |
| BaeGI | GKGCMC | 2 cut(s) | 3504, 3865 |
| BalI | TGGCCA | 2 cut(s) | 924, 3359 |
| BamHI | GGATCC | 2 cut(s) | 166, 337 |
| BanII | GRGCYC | 2 cut(s) | 2800, 3865 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1099, 1131 |
| BauI | CACGAG | 1 cut(s) | 5 |
| BbsI | GAAGAC | 1 cut(s) | 1625 |
| Bbv12I | GWGCWC | 3 cut(s) | 2532, 2800, 3504 |
| BceAI | ACGGC | 3 cut(s) | 2250, 2906, 3417 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3410, 3444, 3543, 3577 |
| BciVI | GTATCC | 1 cut(s) | 2746 |
| BclI | TGATCA | 3 cut(s) | 748, 2080, 2347 |
| BcnI | CCSGG | 2 cut(s) | 780, 3229 |
| BcoDI | GTCTC | 4 cut(s) | 1221, 1697, 2148, 2292 |
| BcuI | ACTAGT | 2 cut(s) | 1103, 2170 |
| BfmI | CTRYAG | 3 cut(s) | 2370, 2523, 3924 |
| BfoI | RGCGCY | 2 cut(s) | 2330, 3235 |
| BfuAI | ACCTGC | 1 cut(s) | 2968 |
| BfuI | GTATCC | 1 cut(s) | 2746 |
| BglII | AGATCT | 2 cut(s) | 445, 3118 |
| BlnI | CCTAGG | 2 cut(s) | 875, 985 |
| BlpI | GCTNAGC | 1 cut(s) | 1489 |
| BmcAI | AGTACT | 1 cut(s) | 1108 |
| Bme18I | GGWCC | 3 cut(s) | 2752, 2912, 3341 |
| BmgT120I | GGNCC | 6 cut(s) | 2707, 2752, 2912, 3341, 3861, 3862 |
| BmsI | GCATC | 5 cut(s) | 482, 784, 2909, 3430, 3448 |
| BpiI | GAAGAC | 1 cut(s) | 1625 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1175, 1207 |
| BpmI | CTGGAG | 4 cut(s) | 186, 1562, 2784, 2856 |
| Bpu10I | CCTNAGC | 3 cut(s) | 2067, 3131, 3651 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1489 |
| Bpu14I | TTCGAA | 1 cut(s) | 1600 |
| BpuEI | CTTGAG | 4 cut(s) | 2218, 2228, 2348, 2671 |
| BpuMI | CCSGG | 2 cut(s) | 780, 3229 |
| BsaAI | YACGTR | 1 cut(s) | 683 |
| BsaBI | GATNNNNATC | 3 cut(s) | 72, 822, 2943 |
| BsaHI | GRCGYC | 1 cut(s) | 3828 |
| BsaI | GGTCTC | 1 cut(s) | 2292 |
| BsaWI | WCCGGW | 3 cut(s) | 163, 690, 2697 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1344, 1374, 2787, 2817, 3771, 3801 |
| Bse1I | ACTGG | 8 cut(s) | 262, 1307, 1833, 2416, 2650, 2801, 2914, 3739 |
| Bse21I | CCTNAGG | 1 cut(s) | 2958 |
| Bse3DI | GCAATG | 3 cut(s) | 96, 2500, 3860 |
| Bse8I | GATNNNNATC | 3 cut(s) | 72, 822, 2943 |
| BseAI | TCCGGA | 3 cut(s) | 163, 690, 2697 |
| BseJI | GATNNNNATC | 3 cut(s) | 72, 822, 2943 |
| BseMI | GCAATG | 3 cut(s) | 96, 2500, 3860 |
| BseNI | ACTGG | 8 cut(s) | 262, 1307, 1833, 2416, 2650, 2801, 2914, 3739 |
| BseRI | GAGGAG | 2 cut(s) | 471, 3755 |
| BseSI | GKGCMC | 2 cut(s) | 3504, 3865 |
| BseYI | CCCAGC | 2 cut(s) | 2600, 3858 |
| BsgI | GTGCAG | 1 cut(s) | 634 |
| Bsh1236I | CGCG | 1 cut(s) | 1972 |
| BshFI | GGCC | 8 cut(s) | 375, 874, 924, 2265, 2708, 3359, 3805, 3863 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2532, 2800, 3504 |
| BsiSI | CCGG | 5 cut(s) | 164, 691, 779, 2698, 3228 |
| BslFI | GGGAC | 4 cut(s) | 305, 1221, 2617, 3172 |
| BsmAI | GTCTC | 4 cut(s) | 1221, 1697, 2148, 2292 |
| BsmFI | GGGAC | 4 cut(s) | 305, 1221, 2617, 3172 |
| BsmI | GAATGC | 2 cut(s) | 851, 3484 |
| BsnI | GGCC | 8 cut(s) | 375, 874, 924, 2265, 2708, 3359, 3805, 3863 |
| Bso31I | GGTCTC | 1 cut(s) | 2292 |
| Bsp119I | TTCGAA | 1 cut(s) | 1600 |
| Bsp120I | GGGCCC | 1 cut(s) | 3861 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2532, 2800, 3504, 3865 |
| Bsp13I | TCCGGA | 3 cut(s) | 163, 690, 2697 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1489 |
| Bsp19I | CCATGG | 2 cut(s) | 3354, 3638 |
| BspACI | CCGC | 9 cut(s) | 286, 941, 1163, 1970, 2774, 2919, 3271, 3913, 3944 |
| BspANI | GGCC | 8 cut(s) | 375, 874, 924, 2265, 2708, 3359, 3805, 3863 |
| BspEI | TCCGGA | 3 cut(s) | 163, 690, 2697 |
| BspFNI | CGCG | 1 cut(s) | 1972 |
| BspMAI | CTGCAG | 1 cut(s) | 3928 |
| BspMI | ACCTGC | 1 cut(s) | 2968 |
| BspQI | GCTCTTC | 1 cut(s) | 3120 |
| BspT104I | TTCGAA | 1 cut(s) | 1600 |
| BspTNI | GGTCTC | 1 cut(s) | 2292 |
| BsrDI | GCAATG | 3 cut(s) | 96, 2500, 3860 |
| BsrI | ACTGG | 8 cut(s) | 262, 1307, 1833, 2416, 2650, 2801, 2914, 3739 |
| BssNI | GRCGYC | 1 cut(s) | 3828 |
| BssSI | CACGAG | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 5 cut(s) | 699, 875, 985, 3354, 3638 |
| Bst2BI | CACGAG | 1 cut(s) | 5 |
| Bst6I | CTCTTC | 4 cut(s) | 574, 1035, 2193, 3120 |
| BstACI | GRCGYC | 1 cut(s) | 3828 |
| BstBAI | YACGTR | 1 cut(s) | 683 |
| BstBI | TTCGAA | 1 cut(s) | 1600 |
| BstC8I | GCNNGC | 6 cut(s) | 1888, 1915, 2279, 2501, 2505, 3931 |
| BstDSI | CCRYGG | 2 cut(s) | 3354, 3638 |
| BstEII | GGTNACC | 2 cut(s) | 516, 1710 |
| BstFNI | CGCG | 1 cut(s) | 1972 |
| BstH2I | RGCGCY | 2 cut(s) | 2330, 3235 |
| BstHHI | GCGC | 2 cut(s) | 2329, 3234 |
| BstMAI | GTCTC | 4 cut(s) | 1221, 1697, 2148, 2292 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 930, 2146, 3356, 3458, 3850, 3949 |
| BstNSI | RCATGY | 3 cut(s) | 196, 329, 3401 |
| BstPI | GGTNACC | 2 cut(s) | 516, 1710 |
| BstSFI | CTRYAG | 3 cut(s) | 2370, 2523, 3924 |
| BstSLI | GKGCMC | 2 cut(s) | 3504, 3865 |
| BstUI | CGCG | 1 cut(s) | 1972 |
| BstV2I | GAAGAC | 1 cut(s) | 1625 |
| BstX2I | RGATCY | 7 cut(s) | 166, 337, 410, 445, 787, 823, 3118 |
| BstYI | RGATCY | 7 cut(s) | 166, 337, 410, 445, 787, 823, 3118 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2958 |
| BsuI | GTATCC | 1 cut(s) | 2746 |
| BsuRI | GGCC | 8 cut(s) | 375, 874, 924, 2265, 2708, 3359, 3805, 3863 |
| BtgI | CCRYGG | 2 cut(s) | 3354, 3638 |
| BtsIMutI | CAGTG | 6 cut(s) | 111, 1125, 1314, 1840, 2853, 3360 |
| BveI | ACCTGC | 1 cut(s) | 2968 |
| Cac8I | GCNNGC | 6 cut(s) | 1888, 1915, 2279, 2501, 2505, 3931 |
| CaiI | CAGNNNCTG | 1 cut(s) | 733 |
| CfoI | GCGC | 2 cut(s) | 2329, 3234 |
| Cfr13I | GGNCC | 6 cut(s) | 2707, 2752, 2912, 3341, 3861, 3862 |
| CseI | GACGC | 1 cut(s) | 3836 |
| CsiI | ACCWGGT | 1 cut(s) | 3957 |
| Csp6I | GTAC | 8 cut(s) | 10, 512, 1101, 1107, 1112, 2219, 3332, 3812 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3294, 3329 |
| CviQI | GTAC | 8 cut(s) | 10, 512, 1101, 1107, 1112, 2219, 3332, 3812 |
| DraI | TTTAAA | 1 cut(s) | 369 |
| DraIII | CACNNNGTG | 1 cut(s) | 3062 |
| EaeI | YGGCCR | 3 cut(s) | 922, 2263, 3357 |
| Eam1104I | CTCTTC | 4 cut(s) | 574, 1035, 2193, 3120 |
| EarI | CTCTTC | 4 cut(s) | 574, 1035, 2193, 3120 |
| EciI | GGCGGA | 1 cut(s) | 956 |
| Ecl136II | GAGCTC | 1 cut(s) | 2798 |
| Eco130I | CCWWGG | 5 cut(s) | 699, 875, 985, 3354, 3638 |
| Eco147I | AGGCCT | 2 cut(s) | 375, 874 |
| Eco24I | GRGCYC | 2 cut(s) | 2800, 3865 |
| Eco31I | GGTCTC | 1 cut(s) | 2292 |
| Eco32I | GATATC | 1 cut(s) | 706 |
| Eco47I | GGWCC | 3 cut(s) | 2752, 2912, 3341 |
| Eco47III | AGCGCT | 1 cut(s) | 2328 |
| Eco53kI | GAGCTC | 1 cut(s) | 2798 |
| Eco57I | CTGAAG | 8 cut(s) | 555, 1008, 1101, 1272, 1677, 1797, 1887, 2370 |
| Eco81I | CCTNAGG | 1 cut(s) | 2958 |
| Eco91I | GGTNACC | 2 cut(s) | 516, 1710 |
| EcoICRI | GAGCTC | 1 cut(s) | 2798 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3862 |
| EcoO65I | GGTNACC | 2 cut(s) | 516, 1710 |
| EcoRI | GAATTC | 2 cut(s) | 1000, 1762 |
| EcoRV | GATATC | 1 cut(s) | 706 |
| EcoT14I | CCWWGG | 5 cut(s) | 699, 875, 985, 3354, 3638 |
| EcoT22I | ATGCAT | 3 cut(s) | 799, 2685, 3762 |
| EcoT38I | GRGCYC | 2 cut(s) | 2800, 3865 |
| ErhI | CCWWGG | 5 cut(s) | 699, 875, 985, 3354, 3638 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 363, 395, 692, 724, 2190, 2222 |
| FaqI | GGGAC | 4 cut(s) | 305, 1221, 2617, 3172 |
| FauI | CCCGC | 4 cut(s) | 279, 2781, 3264, 3906 |
| FbaI | TGATCA | 3 cut(s) | 748, 2080, 2347 |
| FblI | GTMKAC | 1 cut(s) | 2175 |
| FriOI | GRGCYC | 2 cut(s) | 2800, 3865 |
| GlaI | GCGC | 2 cut(s) | 2328, 3233 |
| GsaI | CCCAGC | 2 cut(s) | 2604, 3862 |
| GsuI | CTGGAG | 4 cut(s) | 186, 1562, 2784, 2856 |
| HaeII | RGCGCY | 2 cut(s) | 2330, 3235 |
| HaeIII | GGCC | 8 cut(s) | 375, 874, 924, 2265, 2708, 3359, 3805, 3863 |
| HapII | CCGG | 5 cut(s) | 164, 691, 779, 2698, 3228 |
| HgaI | GACGC | 1 cut(s) | 3836 |
| HhaI | GCGC | 2 cut(s) | 2329, 3234 |
| Hin1I | GRCGYC | 1 cut(s) | 3828 |
| Hin6I | GCGC | 2 cut(s) | 2327, 3232 |
| HinP1I | GCGC | 2 cut(s) | 2327, 3232 |
| HincII | GTYRAC | 2 cut(s) | 1900, 3790 |
| HindII | GTYRAC | 2 cut(s) | 1900, 3790 |
| HindIII | AAGCTT | 2 cut(s) | 656, 3293 |
| HpaII | CCGG | 5 cut(s) | 164, 691, 779, 2698, 3228 |
| HpyAV | CCTTC | 9 cut(s) | 1125, 1143, 1456, 1540, 1772, 2722, 2786, 2958, 3644 |
| HpyCH4IV | ACGT | 3 cut(s) | 682, 2020, 3152 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 930, 2146, 3356, 3458, 3850, 3949 |
| HpySE526I | ACGT | 3 cut(s) | 682, 2020, 3152 |
| Hsp92I | GRCGYC | 1 cut(s) | 3828 |
| HspAI | GCGC | 2 cut(s) | 2327, 3232 |
| Kpn2I | TCCGGA | 3 cut(s) | 163, 690, 2697 |
| Ksp22I | TGATCA | 3 cut(s) | 748, 2080, 2347 |
| LguI | GCTCTTC | 1 cut(s) | 3120 |
| LmnI | GCTCC | 8 cut(s) | 1749, 2002, 2795, 2803, 3652, 3742, 3767, 3850 |
| LweI | GCATC | 5 cut(s) | 482, 784, 2909, 3430, 3448 |
| MabI | ACCWGGT | 1 cut(s) | 3957 |
| MaeII | ACGT | 3 cut(s) | 682, 2020, 3152 |
| MfeI | CAATTG | 3 cut(s) | 1235, 1347, 3258 |
| MflI | RGATCY | 7 cut(s) | 166, 337, 410, 445, 787, 823, 3118 |
| MhlI | GDGCHC | 4 cut(s) | 2532, 2800, 3504, 3865 |
| MlsI | TGGCCA | 2 cut(s) | 924, 3359 |
| MluNI | TGGCCA | 2 cut(s) | 924, 3359 |
| MlyI | GAGTC | 5 cut(s) | 1193, 1895, 2225, 2326, 3336 |
| MmeI | TCCRAC | 3 cut(s) | 202, 1212, 2562 |
| Mox20I | TGGCCA | 2 cut(s) | 924, 3359 |
| Mph1103I | ATGCAT | 3 cut(s) | 799, 2685, 3762 |
| MroI | TCCGGA | 3 cut(s) | 163, 690, 2697 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1518 |
| MscI | TGGCCA | 2 cut(s) | 924, 3359 |
| MseI | TTAA | 8 cut(s) | 183, 239, 368, 1143, 1785, 2553, 3201, 3660 |
| MslI | CAYNNNNRTG | 2 cut(s) | 3050, 3306 |
| Msp20I | TGGCCA | 2 cut(s) | 924, 3359 |
| MspA1I | CMGCKG | 2 cut(s) | 1163, 2776 |
| MspI | CCGG | 5 cut(s) | 164, 691, 779, 2698, 3228 |
| MunI | CAATTG | 3 cut(s) | 1235, 1347, 3258 |
| Mva1269I | GAATGC | 2 cut(s) | 851, 3484 |
| MvnI | CGCG | 1 cut(s) | 1972 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 930, 2146, 3356, 3458, 3850, 3949 |
| NciI | CCSGG | 2 cut(s) | 780, 3229 |
| NcoI | CCATGG | 2 cut(s) | 3354, 3638 |
| NmuCI | GTSAC | 5 cut(s) | 1710, 2131, 2849, 3518, 3824 |
| NsiI | ATGCAT | 3 cut(s) | 799, 2685, 3762 |
| NspI | RCATGY | 3 cut(s) | 196, 329, 3401 |
| NspV | TTCGAA | 1 cut(s) | 1600 |
| OliI | CACNNNNGTG | 1 cut(s) | 3050 |
| PaqCI | CACCTGC | 1 cut(s) | 2968 |
| PasI | CCCWGGG | 1 cut(s) | 1998 |
| PceI | AGGCCT | 2 cut(s) | 375, 874 |
| PciSI | GCTCTTC | 1 cut(s) | 3120 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1647, 2566 |
| PctI | GAATGC | 2 cut(s) | 851, 3484 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1518 |
| PflFI | GACNNNGTC | 1 cut(s) | 1708 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1643, 2633 |
| PfoI | TCCNGGA | 3 cut(s) | 453, 1746, 1849 |
| PleI | GAGTC | 5 cut(s) | 1192, 1895, 2225, 2326, 3335 |
| PpsI | GAGTC | 5 cut(s) | 1192, 1895, 2225, 2326, 3335 |
| Ppu21I | YACGTR | 1 cut(s) | 683 |
| PshBI | ATTAAT | 1 cut(s) | 2553 |
| PsiI | TTATAA | 1 cut(s) | 2943 |
| Psp124BI | GAGCTC | 1 cut(s) | 2800 |
| Psp1406I | AACGTT | 1 cut(s) | 2020 |
| PspEI | GGTNACC | 2 cut(s) | 516, 1710 |
| PspFI | CCCAGC | 2 cut(s) | 2600, 3858 |
| PspOMI | GGGCCC | 1 cut(s) | 3861 |
| PspPI | GGNCC | 6 cut(s) | 2707, 2752, 2912, 3341, 3861, 3862 |
| PstI | CTGCAG | 1 cut(s) | 3928 |
| PstNI | CAGNNNCTG | 1 cut(s) | 733 |
| PsuI | RGATCY | 7 cut(s) | 166, 337, 410, 445, 787, 823, 3118 |
| PsyI | GACNNNGTC | 1 cut(s) | 1708 |
| RsaI | GTAC | 8 cut(s) | 11, 513, 1102, 1108, 1113, 2220, 3333, 3813 |
| RsaNI | GTAC | 8 cut(s) | 10, 512, 1101, 1107, 1112, 2219, 3332, 3812 |
| RseI | CAYNNNNRTG | 2 cut(s) | 3050, 3306 |
| SacI | GAGCTC | 1 cut(s) | 2800 |
| SapI | GCTCTTC | 1 cut(s) | 3120 |
| SaqAI | TTAA | 8 cut(s) | 183, 239, 368, 1143, 1785, 2553, 3201, 3660 |
| Sau96I | GGNCC | 6 cut(s) | 2707, 2752, 2912, 3341, 3861, 3862 |
| ScaI | AGTACT | 1 cut(s) | 1108 |
| SchI | GAGTC | 5 cut(s) | 1193, 1895, 2225, 2326, 3336 |
| SduI | GDGCHC | 4 cut(s) | 2532, 2800, 3504, 3865 |
| SexAI | ACCWGGT | 1 cut(s) | 3957 |
| SfaNI | GCATC | 5 cut(s) | 482, 784, 2909, 3430, 3448 |
| SfcI | CTRYAG | 3 cut(s) | 2370, 2523, 3924 |
| SfuI | TTCGAA | 1 cut(s) | 1600 |
| SinI | GGWCC | 3 cut(s) | 2752, 2912, 3341 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 3050, 3306 |
| SmlI | CTYRAG | 4 cut(s) | 2207, 2233, 2363, 2650 |
| SmoI | CTYRAG | 4 cut(s) | 2207, 2233, 2363, 2650 |
| SpeI | ACTAGT | 2 cut(s) | 1103, 2170 |
| SseBI | AGGCCT | 2 cut(s) | 375, 874 |
| SsiI | CCGC | 9 cut(s) | 286, 941, 1163, 1970, 2774, 2919, 3271, 3913, 3944 |
| SspI | AATATT | 1 cut(s) | 181 |
| SstI | GAGCTC | 1 cut(s) | 2800 |
| StuI | AGGCCT | 2 cut(s) | 375, 874 |
| StyI | CCWWGG | 5 cut(s) | 699, 875, 985, 3354, 3638 |
| TaiI | ACGT | 3 cut(s) | 685, 2023, 3155 |
| TaqI | TCGA | 6 cut(s) | 550, 593, 1600, 1756, 2196, 3507 |
| TaqII | GACCGA | 2 cut(s) | 2316, 2837 |
| TatI | WGTACW | 2 cut(s) | 1100, 1106 |
| TauI | GCSGC | 1 cut(s) | 3946 |
| Tru1I | TTAA | 8 cut(s) | 183, 239, 368, 1143, 1785, 2553, 3201, 3660 |
| Tru9I | TTAA | 8 cut(s) | 183, 239, 368, 1143, 1785, 2553, 3201, 3660 |
| TscAI | CASTG | 6 cut(s) | 118, 1125, 1314, 1840, 2860, 3367 |
| TseFI | GTSAC | 5 cut(s) | 1710, 2131, 2849, 3518, 3824 |
| Tsp45I | GTSAC | 5 cut(s) | 1710, 2131, 2849, 3518, 3824 |
| TspGWI | ACGGA | 6 cut(s) | 1639, 2043, 2310, 2442, 3354, 3383 |
| TspRI | CASTG | 6 cut(s) | 118, 1125, 1314, 1840, 2860, 3367 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1708 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1643, 2633 |
| VneI | GTGCAC | 1 cut(s) | 3500 |
| VpaK11BI | GGWCC | 3 cut(s) | 2752, 2912, 3341 |
| VspI | ATTAAT | 1 cut(s) | 2553 |
| XapI | RAATTY | 9 cut(s) | 266, 278, 430, 1000, 1762, 2399, 2701, 2717, 3282 |
| XbaI | TCTAGA | 3 cut(s) | 353, 1877, 1904 |
| XceI | RCATGY | 3 cut(s) | 196, 329, 3401 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1465, 2403 |
| XmaJI | CCTAGG | 2 cut(s) | 875, 985 |
| XmiI | GTMKAC | 1 cut(s) | 2175 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1518 |
| ZrmI | AGTACT | 1 cut(s) | 1108 |
| Zsp2I | ATGCAT | 3 cut(s) | 799, 2685, 3762 |