Rh5BG150500

PB1 domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
15362169 .. 15368636
6468 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG150500.1

Sequence Viewer

Length: 4005 bp
ATGCTCATGTACCATTTTTACTGCGTTTTGTATTGGTTGTTTGTCCTGGTGAAGTTTTACCTTATGGATAGAAATCTGGGTAAAGGTGCAATGGATCAACCAAAAAACTACGATCAAGTTCGATACAGCACTGTTGAAACTAGAAATGACGGATATGGGTCCGCCAATCAACTGTTTTTCCCGGATCCATCAAGTAATATTAGCACTAATATGCGACCTCCAGAGTATAATGTTTCTGTTGGATCCAGACCTGTATTAAATTACTCTATTCAGACTGGCGAGGAATTTGCTCTTGAATTTATGCGGGAAAGGGTGAACTCGAGGCAGCATTTATTAGTCCCACATGCATCTGGGGATCCTAATAGTGCTTCTAGATATATGGGTCTAAAAGGCATACTTGGAATCAGCCATACAGGCTCAGAGAGTGAGTCCGATGTTTCTATGCTGAATTTGGTAGAGAAAGATCATGTCCCGGAAAATGACACAAAGGCATCTTCTCCTCTTGAAAATAAAAGTTACTTTGATTCAGTACGGTTACCACAACCCTCATCAAGAAATGACATCAATCGAGGACTTTCTGGTTATTCCTCTTCAGGAGTGTCTGATAGCTCATCGAAAAAAGTGAAGTTTCTTTGCAGCTTTGGTGGTAAAATCTTGCCTCGTCCTAGTGATGGAAAGCTTAGATATGTTGGAGGTGAAACACGTATTATCCGGATAACCAAGGATGTCGTTTGGCAGGATCTTATGCAGAAACTGTTGGCAGTTTATGACCAAACTCATACAATAAAGTATCAGCTTCCGGGCGAGGATCTTGATGCATTAGTTTCGGTTTCTTCTGATGAGGATCTGCAAAATATGATGGAGGAATGCACTATTCTACAAGATGGAGGATCACAGAGGCCTAGGATGTTCCTGTTTTCTAGTCTTGATTTAGAGGAATCTCAATTTGGCCCTGAAAGCGTGGAGGGGGATTCTGAGATTCAATATGTTGTTGCTGTAAACGGGATGGACCTAGGTTCAAAAAAGAATTCTATTGCTTTGGCAAGTTCTTCAGGCAACAATTTGGAAGAGTTACTCAGTCTAAATGTTACAAGGGGCAGCACTCACACAGTGCCTGATGCAGCTCCTGCTGGCACTGTTCCTGCAGCGGTAGATGTGCCTTCCTCAGTTAATCAAGCTTCTCATTCAGCGGTTCCTGGTTCTTCAAGTGCTTATGAATCCAACTCACAGCTTTATCAGGGACAAAAAATGCATGGTGGAGACACCCGACAGTATCCATTGTCAGCTTTGAACCCTGTGGAGAGCTTCCCTGCAAAAGATGAACAGATTACAGTGCTCTCATCTGTTCCAGTGCAATATGATTTCGGTTCTCAACCTCCTAATTACGCAATTGGAGAAAATATAGGTTCTATGCCTATCTATGGACAGCCGATTCAACAAGGGGGTCTGATTGAAGATCAGCTATATGCTGGAATACATGGGCAAGATTCAGAATTACCCATAAAGGAGATGAAACTGAAAAGAGATAGCTCGGCCCAAAAGATAAATGAAGCTGAGAAAGTTCAATCTTTAGAGAAGGATACTCAACAGAAGGAAGCAAGAATGACAAGAGAGAGCTCTCTCCAGAAGCTAAATGAAACTGATAAAGTTCGAAGTTTAGAAAATGAGAAGACTGTTTCTGTAAATCCATATGATGGTTCTGTTCCAAATTATATTTCTAGGGATGAAGTTTCAGTTGCCAATTCAGTAGCAGAGACAGGTTCACCCTTATTGGCTACAAGAAGCAACAAAAAGCTCCAGGAACCTCGACAGAATCCAACAACCTCTGAAGATGTAAATGATGGGAAAAAGAACAATGAAGATGACCATTTCCACACAGCAACCAGCGGACTGTCTATTCCTGCATATGCTGGTGCTGAAGTTGACTCTAGATATGCTGGCTCTGAGGTTGATTCTATGGATTTTAGCTATCTTGAACAACCTGTGGTTCCTCCACGTGTCTATCATTCAGAACGAATCCCCAGGGAGCAATCAGAACTGAACCGTCTATCAAAATCTGGGGACTCTTTTGGTTCGCCGTTTATGGTAGCTCAGGCACGTCCTGATCACAAACAACCAATCATGGAATCTGTTGAGAAATTGCATGATGAGAATGTCACTTTGCAGTCTGAGCAGTCTGTCTTACCTTCAAAACTACTGTACAAAATTCCTCAGACAGTTGAAGAGGGGCTTGAGCCAAAGGTACAAAAACCTGACTCAATACATCCAGTTGGTAATTCTGGTGATGGCCGTGAAACGGGCAGGCTAAAGGATAACTACGGAGACCGAAGTATCAGTGATAAACAAGCAGCGCTGACTCAACTAAGAGCTGGTCAAGAAACGTCTCTCAAGCCTACAGATGATTCTGCTTCAGTTCCACCAGAATTTGAATGGACTGAGATAACTGCCAGTAAGGACTACGGAAATAATGGCAAGGGTTATGTAAATCTTGTGGCTCGGAAAGAGAACCCAATTACAGGTGGTGGTAATGGCGAGTCTGCTGTTTGTGTTGGCACTACAGAGCACGGAGATATTCTTATTGATATTAATGATCGTTTTCCCCGTGATTTTCTGTCTGATATATTTTCCAAAGCTAGGATAGACCAGTCTGGTGTCAGTCCACTTCCTGGGGATGGAACTGGCTTGAGCTTGAACATGGAGAATCATGAACCTATGCATTGGTCATACTTCCGAAATTTGGCTCAGAATGAATTTGTAAGAAAAGATGTCTCCCTTATGGATCAGGACCATCTGGGTTTCTCATCCCCACTGACAGGTATTGGAGAAGGAGCTCCAGTTGATTACAGCTATCCACCTTTGAAGTCTGCTGGAGTTGTTTTTGGTCACACTGAATCACATATCAGTTTTGATGAGGATATTCGGCAAGATTTGTCATCTATAACTGGACCCACCACCATAAATGTAAATTCAGATTATAATCCTTCTCTACCTGAGGGAATTGAAAGTGAGCAGGTGGATGGGGTAAATCATAGAGTACGAGAATCAGAATATGAGGATGACAAGCTAGAGAACAAGAACACAGCTGGACCACCTGGTGATCTTCCTCTGGAAGATTTTGATATTACTACCTTGCAGATCATAAAAAATGAAGATCTTGAAGAGCTTAGGGAATTGGGTTCTGGCACGTTTGGGACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCCATTAAGCGAATAAAAAAGAGCTGTTTCACAGGGCGCTCATCAGAGCAAGAAAGATTGACGGTTGAGTTCTGGCGTGAAGCTGAAATTCTTTCAAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGGGTCGTGCAGGACGGACCAGGGGCAACGCTAGCCACTGTGACCGAGTTCATGGTGAATGGCTCTCTGAGGCATGTTTTACTTAGCAAGGAGAGGCATCTTGATCGTCGTAAAAGGCTCATTATTGCTATGGATGCAGCATTTGGAATGGAGTATCTGCATTCCAAAAATATAGTGCACTTTGATTTGAAATGTGACAATTTGCTTGTGAACTTGAAAGACCCTTTACGACCCATTTGCAAGGTAGGAGATTTTGGGCTGTCTAAAATAAAAAGAAATACCTTAGTTACGGGTGGTGTGAGGGGAACCCTTCCATGGATGGCTCCTGAGCTTCTTAATGGTAGCAGTAGTAAGGTTTCAGAAAAGGTTGATGTCTTTTCCTTTGGCATCGTCTTATGGGAGATTCTTACTTGTGAGGAGCCTTATGCCAATATGCATTACGGAGCAATCATAGGAGGCATTGTCAATAACACATTGAGGCCATCCGTACCCAACTATTGTGATGCTGAATGGAAGTTGCTGATGGAACAATGCTGGGCCCCTGATCCCACTGTCCGCCCATCATTCACGGAAATTGCCAGACGGTTGCGTGTGATGTCTGCAGCTTGCCAAACTAAGCCACAACAGCAGAACCAGGTAGCCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1334

Amino Acids

147.52

Weight (kDa)

5.14

Isoelectric Point (pI)

48.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 224 - 307 4.5e-19 PB1 domain
Pkinase PF00069 1053 - 1312 2.4e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1054 - 1315 9.7e-63 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2976
AarI CACCTGC 1 cut(s) 3001
Acc36I ACCTGC 1 cut(s) 3001
AccB7I CCANNNNNTGG 2 cut(s) 1694, 2666
AccIII TCCGGA 1 cut(s) 711
AciI CCGC 6 cut(s) 162, 304, 1148, 1190, 1887, 3913
AcoI YGGCCR 1 cut(s) 2287
AcuI CTGAAG 5 cut(s) 576, 1035, 1848, 1938, 2394
AcvI CACGTG 1 cut(s) 1997
AdeI CACNNNGTG 2 cut(s) 1111, 3095
AfaI GTAC 6 cut(s) 11, 531, 2201, 2244, 3036, 3846
AfeI AGCGCT 1 cut(s) 2352
AflIII ACRYGT 2 cut(s) 701, 1996
AjiI CACGTC 1 cut(s) 2099
AjnI CCWGG 8 cut(s) 45, 1195, 1797, 2021, 2665, 3091, 3376, 3990
AjuI GAANNNNNNNTTGG 4 cut(s) 930, 962, 1699, 1731
Alw21I GWGCWC 5 cut(s) 1338, 1619, 2565, 2833, 3537
Alw26I GTCTC 5 cut(s) 1254, 1748, 2316, 2388, 2773
Alw44I GTGCAC 1 cut(s) 3533
AlwNI CAGNNNCTG 3 cut(s) 754, 1115, 1127
Ama87I CYCGRG 1 cut(s) 319
Aor13HI TCCGGA 1 cut(s) 711
Aor51HI AGCGCT 1 cut(s) 2352
AoxI GGCC 6 cut(s) 899, 949, 1533, 2287, 3836, 3894
ApaI GGGCCC 1 cut(s) 3898
ApaLI GTGCAC 1 cut(s) 3533
ApeKI GCWGC 8 cut(s) 325, 636, 1098, 1121, 1145, 2348, 3494, 3959
AseI ATTAAT 1 cut(s) 2586
AspA2I CCTAGG 2 cut(s) 902, 1012
AspLEI GCGC 2 cut(s) 2353, 3267
AsuC2I CCSGG 3 cut(s) 182, 473, 801
AsuHPI GGTGA 8 cut(s) 61, 325, 707, 1755, 2294, 3107, 3323, 3424
AsuII TTCGAA 1 cut(s) 1651
AsuNHI GCTAGC 1 cut(s) 3388
AvaI CYCGRG 1 cut(s) 319
AvaII GGWCC 6 cut(s) 159, 1009, 2785, 2945, 3086, 3374
AvrII CCTAGG 2 cut(s) 902, 1012
AxyI CCTNAGG 1 cut(s) 2991
BaeGI GKGCMC 2 cut(s) 3537, 3898
BaeI ACNNNNGTAYC 2 cut(s) 2314, 2347
BamHI GGATCC 3 cut(s) 184, 242, 355
BanII GRGCYC 3 cut(s) 1619, 2833, 3898
BbrPI CACGTG 1 cut(s) 1997
BbsI GAAGAC 1 cut(s) 1676
Bbv12I GWGCWC 5 cut(s) 1338, 1619, 2565, 2833, 3537
BbvI GCAGC 8 cut(s) 337, 648, 1110, 1133, 1157, 2360, 3506, 3971
BceAI ACGGC 2 cut(s) 2062, 2274
BcgI CGANNNNNNTGC 8 cut(s) 269, 303, 807, 841, 3443, 3477, 3576, 3610
BciT130I CCWGG 8 cut(s) 47, 1197, 1799, 2023, 2667, 3093, 3378, 3992
BciVI GTATCC 2 cut(s) 1284, 1573
BclI TGATCA 1 cut(s) 2104
BcnI CCSGG 3 cut(s) 182, 473, 801
BcoDI GTCTC 5 cut(s) 1254, 1748, 2316, 2388, 2773
BfmI CTRYAG 4 cut(s) 1143, 2394, 2556, 3957
BfoI RGCGCY 2 cut(s) 2354, 3268
BfuAI ACCTGC 1 cut(s) 3001
BfuI GTATCC 2 cut(s) 1284, 1573
BglI GCCNNNNNGGC 1 cut(s) 414
BglII AGATCT 1 cut(s) 3151
BisI GCNGC 8 cut(s) 326, 637, 1099, 1122, 1146, 2349, 3495, 3960
BlnI CCTAGG 2 cut(s) 902, 1012
BlsI GCNGC 8 cut(s) 327, 638, 1100, 1123, 1147, 2350, 3496, 3961
Bme18I GGWCC 6 cut(s) 159, 1009, 2785, 2945, 3086, 3374
BmeT110I CYCGRG 1 cut(s) 319
BmgBI CACGTC 1 cut(s) 2099
BmsI GCATC 8 cut(s) 356, 500, 805, 1108, 3463, 3481, 3753, 3850
BmtI GCTAGC 1 cut(s) 3392
BpiI GAAGAC 1 cut(s) 1676
BpmI CTGGAG 5 cut(s) 204, 1607, 1781, 2817, 2889
Bpu10I CCTNAGC 3 cut(s) 2091, 3164, 3684
Bpu14I TTCGAA 1 cut(s) 1651
BpuEI CTTGAG 3 cut(s) 2252, 2372, 2704
BpuMI CCSGG 3 cut(s) 182, 473, 801
BsaAI YACGTR 2 cut(s) 704, 1997
BsaBI GATNNNNATC 3 cut(s) 72, 843, 2976
BsaI GGTCTC 1 cut(s) 2316
BsaJI CCNNGG 8 cut(s) 720, 902, 1012, 2021, 2022, 2666, 3377, 3671
BsaWI WCCGGW 1 cut(s) 711
BsaXI ACNNNNNCTCC 4 cut(s) 2820, 2850, 3804, 3834
Bse1I ACTGG 8 cut(s) 280, 1349, 2267, 2448, 2644, 2683, 2834, 2947
Bse21I CCTNAGG 1 cut(s) 2991
Bse3DI GCAATG 1 cut(s) 96
Bse8I GATNNNNATC 3 cut(s) 72, 843, 2976
BseAI TCCGGA 1 cut(s) 711
BseBI CCWGG 8 cut(s) 47, 1197, 1799, 2023, 2667, 3093, 3378, 3992
BseDI CCNNGG 8 cut(s) 720, 902, 1012, 2021, 2022, 2666, 3377, 3671
BseJI GATNNNNATC 3 cut(s) 72, 843, 2976
BseMI GCAATG 1 cut(s) 96
BseNI ACTGG 8 cut(s) 280, 1349, 2267, 2448, 2644, 2683, 2834, 2947
BseRI GAGGAG 2 cut(s) 489, 3788
BseSI GKGCMC 2 cut(s) 3537, 3898
BseXI GCAGC 8 cut(s) 337, 648, 1110, 1133, 1157, 2360, 3506, 3971
BseYI CCCAGC 1 cut(s) 3891
BsgI GTGCAG 1 cut(s) 3386
BshFI GGCC 6 cut(s) 901, 951, 1535, 2289, 3838, 3896
BsiHKAI GWGCWC 5 cut(s) 1338, 1619, 2565, 2833, 3537
BsiHKCI CYCGRG 1 cut(s) 319
BsiSI CCGG 4 cut(s) 182, 473, 712, 800
BslFI GGGAC 5 cut(s) 323, 455, 1254, 2075, 3205
BsmAI GTCTC 5 cut(s) 1254, 1748, 2316, 2388, 2773
BsmBI CGTCTC 1 cut(s) 2388
BsmFI GGGAC 5 cut(s) 323, 455, 1254, 2075, 3205
BsmI GAATGC 2 cut(s) 872, 3517
BsnI GGCC 6 cut(s) 901, 951, 1535, 2289, 3838, 3896
Bso31I GGTCTC 1 cut(s) 2316
BsoBI CYCGRG 1 cut(s) 319
Bsp119I TTCGAA 1 cut(s) 1651
Bsp120I GGGCCC 1 cut(s) 3894
Bsp1286I GDGCHC 6 cut(s) 1338, 1619, 2565, 2833, 3537, 3898
Bsp13I TCCGGA 1 cut(s) 711
Bsp1407I TGTACA 1 cut(s) 2199
Bsp19I CCATGG 1 cut(s) 3671
BspACI CCGC 6 cut(s) 162, 304, 1148, 1190, 1887, 3913
BspANI GGCC 6 cut(s) 901, 951, 1535, 2289, 3838, 3896
BspEI TCCGGA 1 cut(s) 711
BspHI TCATGA 1 cut(s) 2704
BspMAI CTGCAG 2 cut(s) 1147, 3961
BspMI ACCTGC 1 cut(s) 3001
BspOI GCTAGC 1 cut(s) 3392
BspQI GCTCTTC 1 cut(s) 3153
BspT104I TTCGAA 1 cut(s) 1651
BspTNI GGTCTC 1 cut(s) 2316
BsrDI GCAATG 1 cut(s) 96
BsrGI TGTACA 1 cut(s) 2199
BsrI ACTGG 8 cut(s) 280, 1349, 2267, 2448, 2644, 2683, 2834, 2947
BssECI CCNNGG 8 cut(s) 720, 902, 1012, 2021, 2022, 2666, 3377, 3671
BssT1I CCWWGG 4 cut(s) 720, 902, 1012, 3671
Bst2UI CCWGG 8 cut(s) 47, 1197, 1799, 2023, 2667, 3093, 3378, 3992
Bst6I CTCTTC 4 cut(s) 595, 1062, 2217, 3153
BstAPI GCANNNNNTGC 1 cut(s) 1127
BstAUI TGTACA 1 cut(s) 2199
BstBAI YACGTR 2 cut(s) 704, 1997
BstBI TTCGAA 1 cut(s) 1651
BstC8I GCNNGC 5 cut(s) 1132, 1939, 2303, 3390, 3964
BstDSI CCRYGG 1 cut(s) 3671
BstEII GGTNACC 1 cut(s) 534
BstH2I RGCGCY 2 cut(s) 2354, 3268
BstHHI GCGC 2 cut(s) 2353, 3267
BstMAI GTCTC 5 cut(s) 1254, 1748, 2316, 2388, 2773
BstMWI GCNNNNNNNGC 7 cut(s) 414, 957, 1127, 2170, 3389, 3491, 3982
BstNI CCWGG 8 cut(s) 47, 1197, 1799, 2023, 2667, 3093, 3378, 3992
BstNSI RCATGY 2 cut(s) 347, 3434
BstPI GGTNACC 1 cut(s) 534
BstSFI CTRYAG 4 cut(s) 1143, 2394, 2556, 3957
BstSLI GKGCMC 2 cut(s) 3537, 3898
BstV1I GCAGC 8 cut(s) 337, 648, 1110, 1133, 1157, 2360, 3506, 3971
BstV2I GAAGAC 1 cut(s) 1676
BstX2I RGATCY 7 cut(s) 184, 242, 355, 739, 808, 844, 3151
BstYI RGATCY 7 cut(s) 184, 242, 355, 739, 808, 844, 3151
Bsu36I CCTNAGG 1 cut(s) 2991
BsuI GTATCC 2 cut(s) 1284, 1573
BsuRI GGCC 6 cut(s) 901, 951, 1535, 2289, 3838, 3896
BtgI CCRYGG 1 cut(s) 3671
BtrI CACGTC 1 cut(s) 2099
BveI ACCTGC 1 cut(s) 3001
Cac8I GCNNGC 5 cut(s) 1132, 1939, 2303, 3390, 3964
CaiI CAGNNNCTG 3 cut(s) 754, 1115, 1127
CciI TCATGA 1 cut(s) 2704
CfoI GCGC 2 cut(s) 2353, 3267
CsiI ACCWGGT 2 cut(s) 3091, 3990
Csp6I GTAC 6 cut(s) 10, 530, 2200, 2243, 3035, 3845
CspCI CAANNNNNGTGG 2 cut(s) 3327, 3362
CviQI GTAC 6 cut(s) 10, 530, 2200, 2243, 3035, 3845
DraIII CACNNNGTG 2 cut(s) 1111, 3095
EaeI YGGCCR 1 cut(s) 2287
Eam1104I CTCTTC 4 cut(s) 595, 1062, 2217, 3153
EarI CTCTTC 4 cut(s) 595, 1062, 2217, 3153
EciI GGCGGA 2 cut(s) 151, 3902
Ecl136II GAGCTC 2 cut(s) 1617, 2831
Eco130I CCWWGG 4 cut(s) 720, 902, 1012, 3671
Eco147I AGGCCT 1 cut(s) 901
Eco24I GRGCYC 3 cut(s) 1619, 2833, 3898
Eco31I GGTCTC 1 cut(s) 2316
Eco47I GGWCC 6 cut(s) 159, 1009, 2785, 2945, 3086, 3374
Eco47III AGCGCT 1 cut(s) 2352
Eco53kI GAGCTC 2 cut(s) 1617, 2831
Eco57I CTGAAG 5 cut(s) 576, 1035, 1848, 1938, 2394
Eco72I CACGTG 1 cut(s) 1997
Eco81I CCTNAGG 1 cut(s) 2991
Eco88I CYCGRG 1 cut(s) 319
Eco91I GGTNACC 1 cut(s) 534
EcoICRI GAGCTC 2 cut(s) 1617, 2831
EcoO109I RGGNCCY 1 cut(s) 3895
EcoO65I GGTNACC 1 cut(s) 534
EcoRI GAATTC 1 cut(s) 1027
EcoRII CCWGG 8 cut(s) 45, 1195, 1797, 2021, 2665, 3091, 3376, 3990
EcoT14I CCWWGG 4 cut(s) 720, 902, 1012, 3671
EcoT22I ATGCAT 5 cut(s) 349, 820, 1254, 2718, 3795
EcoT38I GRGCYC 3 cut(s) 1619, 2833, 3898
ErhI CCWWGG 4 cut(s) 720, 902, 1012, 3671
Esp3I CGTCTC 1 cut(s) 2388
FalI AAGNNNNNCTT 4 cut(s) 381, 413, 2214, 2246
FaqI GGGAC 5 cut(s) 323, 455, 1254, 2075, 3205
FauI CCCGC 1 cut(s) 297
FauNDI CATATG 2 cut(s) 1690, 1906
FbaI TGATCA 1 cut(s) 2104
Fnu4HI GCNGC 8 cut(s) 326, 637, 1099, 1122, 1146, 2349, 3495, 3960
FriOI GRGCYC 3 cut(s) 1619, 2833, 3898
Fsp4HI GCNGC 8 cut(s) 326, 637, 1099, 1122, 1146, 2349, 3495, 3960
GlaI GCGC 2 cut(s) 2352, 3266
GluI GCNGC 8 cut(s) 326, 637, 1099, 1122, 1146, 2349, 3495, 3960
GsaI CCCAGC 1 cut(s) 3895
GsuI CTGGAG 5 cut(s) 204, 1607, 1781, 2817, 2889
HaeII RGCGCY 2 cut(s) 2354, 3268
HaeIII GGCC 6 cut(s) 901, 951, 1535, 2289, 3838, 3896
HapII CCGG 4 cut(s) 182, 473, 712, 800
HhaI GCGC 2 cut(s) 2353, 3267
Hin6I GCGC 2 cut(s) 2351, 3265
HinP1I GCGC 2 cut(s) 2351, 3265
HincII GTYRAC 1 cut(s) 1924
HindII GTYRAC 1 cut(s) 1924
HindIII AAGCTT 3 cut(s) 677, 1176, 3326
HpaII CCGG 4 cut(s) 182, 473, 712, 800
HphI GGTGA 8 cut(s) 61, 325, 707, 1755, 2294, 3107, 3323, 3424
Hpy166II GTNNAC 7 cut(s) 316, 1000, 1763, 1924, 2660, 3535, 3568
Hpy8I GTNNAC 7 cut(s) 316, 1000, 1763, 1924, 2660, 3535, 3568
Hpy99I CGWCG 1 cut(s) 3468
HpyAV CCTTC 7 cut(s) 1170, 1570, 1585, 2196, 2819, 2991, 3677
HpyCH4IV ACGT 5 cut(s) 703, 1996, 2098, 2381, 3185
HpyF10VI GCNNNNNNNGC 7 cut(s) 414, 957, 1127, 2170, 3389, 3491, 3982
HpySE526I ACGT 5 cut(s) 703, 1996, 2098, 2381, 3185
HspAI GCGC 2 cut(s) 2351, 3265
Kpn2I TCCGGA 1 cut(s) 711
Ksp22I TGATCA 1 cut(s) 2104
LguI GCTCTTC 1 cut(s) 3153
LmnI GCTCC 8 cut(s) 1129, 1800, 2026, 2828, 2836, 3685, 3775, 3800
Lsp1109I GCAGC 8 cut(s) 337, 648, 1110, 1133, 1157, 2360, 3506, 3971
LweI GCATC 8 cut(s) 356, 500, 805, 1108, 3463, 3481, 3753, 3850
MabI ACCWGGT 2 cut(s) 3091, 3990
MaeII ACGT 5 cut(s) 703, 1996, 2098, 2381, 3185
MaeIII GTNAC 9 cut(s) 515, 534, 1071, 1087, 2155, 2882, 3397, 3551, 3643
MfeI CAATTG 1 cut(s) 1389
MflI RGATCY 7 cut(s) 184, 242, 355, 739, 808, 844, 3151
MhlI GDGCHC 6 cut(s) 1338, 1619, 2565, 2833, 3537, 3898
MlyI GAGTC 6 cut(s) 437, 1919, 2057, 2249, 2350, 2543
MmeI TCCRAC 4 cut(s) 220, 670, 1245, 1841
Mph1103I ATGCAT 5 cut(s) 349, 820, 1254, 2718, 3795
MroI TCCGGA 1 cut(s) 711
MseI TTAA 5 cut(s) 257, 1170, 2586, 3234, 3693
MslI CAYNNNNRTG 2 cut(s) 209, 3339
MspA1I CMGCKG 4 cut(s) 1148, 1190, 1887, 3083
MspI CCGG 4 cut(s) 182, 473, 712, 800
MunI CAATTG 1 cut(s) 1389
Mva1269I GAATGC 2 cut(s) 872, 3517
MvaI CCWGG 8 cut(s) 47, 1197, 1799, 2023, 2667, 3093, 3378, 3992
MwoI GCNNNNNNNGC 7 cut(s) 414, 957, 1127, 2170, 3389, 3491, 3982
NciI CCSGG 3 cut(s) 182, 473, 801
NcoI CCATGG 1 cut(s) 3671
NdeI CATATG 2 cut(s) 1690, 1906
NheI GCTAGC 1 cut(s) 3388
NmeAIII GCCGAG 1 cut(s) 1511
NmuCI GTSAC 4 cut(s) 2155, 2882, 3397, 3551
NsiI ATGCAT 5 cut(s) 349, 820, 1254, 2718, 3795
NspI RCATGY 2 cut(s) 347, 3434
NspV TTCGAA 1 cut(s) 1651
PaeR7I CTCGAG 1 cut(s) 319
PagI TCATGA 1 cut(s) 2704
PaqCI CACCTGC 1 cut(s) 3001
PasI CCCWGGG 1 cut(s) 2022
PceI AGGCCT 1 cut(s) 901
PciSI GCTCTTC 1 cut(s) 3153
PcsI WCGNNNNNNNCGW 1 cut(s) 2599
PctI GAATGC 2 cut(s) 872, 3517
PflMI CCANNNNNTGG 2 cut(s) 1694, 2666
PfoI TCCNGGA 3 cut(s) 180, 471, 1797
PkrI GCNGC 8 cut(s) 327, 638, 1100, 1123, 1147, 2350, 3496, 3961
PleI GAGTC 6 cut(s) 436, 1919, 2057, 2249, 2350, 2542
PmaCI CACGTG 1 cut(s) 1997
PmlI CACGTG 1 cut(s) 1997
PpsI GAGTC 6 cut(s) 436, 1919, 2057, 2249, 2350, 2542
Ppu21I YACGTR 2 cut(s) 704, 1997
PshBI ATTAAT 1 cut(s) 2586
PsiI TTATAA 1 cut(s) 2976
Psp124BI GAGCTC 2 cut(s) 1619, 2833
Psp6I CCWGG 8 cut(s) 45, 1195, 1797, 2021, 2665, 3091, 3376, 3990
PspCI CACGTG 1 cut(s) 1997
PspEI GGTNACC 1 cut(s) 534
PspFI CCCAGC 1 cut(s) 3891
PspGI CCWGG 8 cut(s) 45, 1195, 1797, 2021, 2665, 3091, 3376, 3990
PspOMI GGGCCC 1 cut(s) 3894
PspXI VCTCGAGB 1 cut(s) 319
PstI CTGCAG 2 cut(s) 1147, 3961
PstNI CAGNNNCTG 3 cut(s) 754, 1115, 1127
PsuI RGATCY 7 cut(s) 184, 242, 355, 739, 808, 844, 3151
PvuII CAGCTG 1 cut(s) 3083
RsaI GTAC 6 cut(s) 11, 531, 2201, 2244, 3036, 3846
RsaNI GTAC 6 cut(s) 10, 530, 2200, 2243, 3035, 3845
RseI CAYNNNNRTG 2 cut(s) 209, 3339
SacI GAGCTC 2 cut(s) 1619, 2833
SapI GCTCTTC 1 cut(s) 3153
SaqAI TTAA 5 cut(s) 257, 1170, 2586, 3234, 3693
SatI GCNGC 8 cut(s) 326, 637, 1099, 1122, 1146, 2349, 3495, 3960
SchI GAGTC 6 cut(s) 437, 1919, 2057, 2249, 2350, 2543
SduI GDGCHC 6 cut(s) 1338, 1619, 2565, 2833, 3537, 3898
SexAI ACCWGGT 2 cut(s) 3091, 3990
SfaNI GCATC 8 cut(s) 356, 500, 805, 1108, 3463, 3481, 3753, 3850
SfcI CTRYAG 4 cut(s) 1143, 2394, 2556, 3957
Sfr274I CTCGAG 1 cut(s) 319
SfuI TTCGAA 1 cut(s) 1651
SinI GGWCC 6 cut(s) 159, 1009, 2785, 2945, 3086, 3374
SlaI CTCGAG 1 cut(s) 319
SmiMI CAYNNNNRTG 2 cut(s) 209, 3339
SmlI CTYRAG 4 cut(s) 319, 2231, 2387, 2683
SmoI CTYRAG 4 cut(s) 319, 2231, 2387, 2683
SseBI AGGCCT 1 cut(s) 901
SsiI CCGC 6 cut(s) 162, 304, 1148, 1190, 1887, 3913
SspI AATATT 1 cut(s) 199
SstI GAGCTC 2 cut(s) 1619, 2833
StuI AGGCCT 1 cut(s) 901
StyI CCWWGG 4 cut(s) 720, 902, 1012, 3671
TaiI ACGT 5 cut(s) 706, 1999, 2101, 2384, 3188
TaqI TCGA 6 cut(s) 121, 320, 568, 614, 1651, 1807
TaqII GACCGA 2 cut(s) 2340, 3416
TatI WGTACW 1 cut(s) 2199
Tru1I TTAA 5 cut(s) 257, 1170, 2586, 3234, 3693
Tru9I TTAA 5 cut(s) 257, 1170, 2586, 3234, 3693
TseFI GTSAC 4 cut(s) 2155, 2882, 3397, 3551
TseI GCWGC 8 cut(s) 325, 636, 1098, 1121, 1145, 2348, 3494, 3959
Tsp45I GTSAC 4 cut(s) 2155, 2882, 3397, 3551
TspGWI ACGGA 8 cut(s) 165, 2334, 2475, 2580, 3387, 3813, 3832, 3941
Van91I CCANNNNNTGG 2 cut(s) 1694, 2666
VneI GTGCAC 1 cut(s) 3533
VpaK11BI GGWCC 6 cut(s) 159, 1009, 2785, 2945, 3086, 3374
VspI ATTAAT 1 cut(s) 2586
XbaI TCTAGA 2 cut(s) 371, 1928
XceI RCATGY 2 cut(s) 347, 3434
XcmI CCANNNNNNNNNTGG 1 cut(s) 2427
XhoI CTCGAG 1 cut(s) 319
XmaJI CCTAGG 2 cut(s) 902, 1012
Zsp2I ATGCAT 5 cut(s) 349, 820, 1254, 2718, 3795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.