PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35050 AT2G35050 |
| fragaria_vesca | FvH4_3g12590 FvH4_3g12590 FvH4_3g12590 |
| malus_domestica | MD05G1249500.v1.1 MD10G1168200.v1.1 MD10G1229900.v1.1 |
| prunus_persica | Prupe.4G114600_v2.0.a1 Prupe.4G114600_v2.0.a1 |
| pyrus_communis | pycom05g22660 pycom05g22670 pycom10g19340 pycom10g19350 |
| rosa_chinensis | RchiOBHm_Chr2g0086691 RchiOBHm_Chr5g0020551 |
| rosa_laevigata | RLG00000032538 |
| rosa_multiflora | Rmu_sc0004626.1_g000009 Rmu_sc0009745.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057740 Rroxscaffold_4G00315010 |
| rosa_rugosa | Rorug01G0468600 Rorug05G0060400 Rorug05G0060500 Rorug05G0060600 Rorug05G0060600 |
| rosa_samantha | Rh2AG020600 Rh2BG020400 Rh5AG151100 Rh5BG150500 Rh5CG162000 Rh5DG149900 |
| rosa_wichuraiana | Rw5G013370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3946 |
| Acc36I | ACCTGC | 1 cut(s) | 3946 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2059, 2675 |
| AccBSI | CCGCTC | 1 cut(s) | 1990 |
| AccII | CGCG | 3 cut(s) | 646, 2605, 3315 |
| AccIII | TCCGGA | 1 cut(s) | 2380 |
| AciI | CCGC | 9 cut(s) | 644, 1955, 1990, 2099, 2351, 2596, 2603, 3481, 3906 |
| AcoI | YGGCCR | 2 cut(s) | 2306, 3237 |
| AcuI | CTGAAG | 4 cut(s) | 561, 1020, 1827, 2400 |
| AcvI | CACGTG | 1 cut(s) | 9 |
| AfaI | GTAC | 9 cut(s) | 88, 120, 176, 519, 1176, 2280, 2686, 3033, 3096 |
| AflII | CTTAAG | 1 cut(s) | 3173 |
| AflIII | ACRYGT | 3 cut(s) | 8, 686, 3850 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1129, 1161 |
| Alw21I | GWGCWC | 4 cut(s) | 358, 1088, 1598, 3546 |
| Alw26I | GTCTC | 3 cut(s) | 1727, 2565, 2831 |
| Alw44I | GTGCAC | 1 cut(s) | 3542 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 727, 1100, 1394 |
| Ama87I | CYCGRG | 1 cut(s) | 1089 |
| Aor13HI | TCCGGA | 1 cut(s) | 2380 |
| AoxI | GGCC | 6 cut(s) | 248, 2302, 2306, 3237, 3845, 3903 |
| ApaLI | GTGCAC | 1 cut(s) | 3542 |
| AseI | ATTAAT | 1 cut(s) | 2589 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1012, 2925 |
| AspA2I | CCTAGG | 2 cut(s) | 887, 1628 |
| AspLEI | GCGC | 2 cut(s) | 1121, 3315 |
| AspS9I | GGNCC | 6 cut(s) | 2302, 2794, 2954, 3383, 3903, 4000 |
| AsuC2I | CCSGG | 1 cut(s) | 2943 |
| AsuII | TTCGAA | 1 cut(s) | 3332 |
| AvaI | CYCGRG | 1 cut(s) | 1089 |
| AvaII | GGWCC | 4 cut(s) | 2794, 2954, 3383, 4000 |
| AvrII | CCTAGG | 2 cut(s) | 887, 1628 |
| BaeGI | GKGCMC | 2 cut(s) | 460, 3546 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3078, 3111 |
| BalI | TGGCCA | 1 cut(s) | 3239 |
| BamHI | GGATCC | 3 cut(s) | 184, 343, 1992 |
| BanII | GRGCYC | 1 cut(s) | 1598 |
| BauI | CACGAG | 1 cut(s) | 762 |
| BbrPI | CACGTG | 1 cut(s) | 9 |
| Bbv12I | GWGCWC | 4 cut(s) | 358, 1088, 1598, 3546 |
| BbvCI | CCTCAGC | 1 cut(s) | 1968 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3585, 3619, 3899, 3933 |
| BciVI | GTATCC | 1 cut(s) | 1874 |
| BcnI | CCSGG | 1 cut(s) | 2943 |
| BcoDI | GTCTC | 3 cut(s) | 1727, 2565, 2831 |
| BfaI | CTAG | 8 cut(s) | 141, 888, 1110, 1629, 1698, 1905, 2502, 3398 |
| BfmI | CTRYAG | 3 cut(s) | 619, 1728, 3966 |
| BfrI | CTTAAG | 1 cut(s) | 3173 |
| BfuAI | ACCTGC | 1 cut(s) | 3946 |
| BfuI | GTATCC | 1 cut(s) | 1874 |
| BglII | AGATCT | 2 cut(s) | 829, 3160 |
| BlnI | CCTAGG | 2 cut(s) | 887, 1628 |
| BlpI | GCTNAGC | 1 cut(s) | 3069 |
| BmcAI | AGTACT | 1 cut(s) | 1176 |
| Bme18I | GGWCC | 4 cut(s) | 2794, 2954, 3383, 4000 |
| BmeT110I | CYCGRG | 1 cut(s) | 1089 |
| BmgT120I | GGNCC | 6 cut(s) | 2302, 2794, 2954, 3383, 3903, 4000 |
| BmrI | ACTGGG | 2 cut(s) | 395, 2047 |
| BmsI | GCATC | 4 cut(s) | 720, 790, 1267, 3490 |
| BmuI | ACTGGG | 2 cut(s) | 395, 2047 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2562, 2594 |
| BpmI | CTGGAG | 5 cut(s) | 204, 1392, 1760, 2544, 2826 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1968, 2715, 2721, 3693 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3069 |
| Bpu14I | TTCGAA | 1 cut(s) | 3332 |
| BpuEI | CTTGAG | 3 cut(s) | 2288, 2713, 2984 |
| BpuMI | CCSGG | 1 cut(s) | 2943 |
| BsaAI | YACGTR | 2 cut(s) | 9, 689 |
| BsaBI | GATNNNNATC | 5 cut(s) | 41, 72, 828, 2253, 2985 |
| BsaWI | WCCGGW | 1 cut(s) | 2380 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2885, 2915, 3813, 3843 |
| Bse118I | RCCGGY | 1 cut(s) | 2304 |
| Bse3DI | GCAATG | 3 cut(s) | 862, 1325, 3902 |
| Bse8I | GATNNNNATC | 5 cut(s) | 41, 72, 828, 2253, 2985 |
| BseAI | TCCGGA | 1 cut(s) | 2380 |
| BseJI | GATNNNNATC | 5 cut(s) | 41, 72, 828, 2253, 2985 |
| BseMI | GCAATG | 3 cut(s) | 862, 1325, 3902 |
| BseRI | GAGGAG | 2 cut(s) | 1956, 3797 |
| BseSI | GKGCMC | 2 cut(s) | 460, 3546 |
| BseYI | CCCAGC | 1 cut(s) | 3900 |
| BsgI | GTGCAG | 3 cut(s) | 1116, 1497, 2168 |
| Bsh1236I | CGCG | 3 cut(s) | 646, 2605, 3315 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2823 |
| BshFI | GGCC | 6 cut(s) | 250, 2304, 2308, 3239, 3847, 3905 |
| BsiEI | CGRYCG | 1 cut(s) | 2823 |
| BsiHKAI | GWGCWC | 4 cut(s) | 358, 1088, 1598, 3546 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1089 |
| BsiSI | CCGG | 3 cut(s) | 2305, 2381, 2943 |
| BslFI | GGGAC | 3 cut(s) | 1268, 2117, 3986 |
| BsmAI | GTCTC | 3 cut(s) | 1727, 2565, 2831 |
| BsmFI | GGGAC | 3 cut(s) | 1268, 2117, 3986 |
| BsmI | GAATGC | 2 cut(s) | 857, 3070 |
| BsnI | GGCC | 6 cut(s) | 250, 2304, 2308, 3239, 3847, 3905 |
| BsoBI | CYCGRG | 1 cut(s) | 1089 |
| Bsp119I | TTCGAA | 1 cut(s) | 3332 |
| Bsp1286I | GDGCHC | 5 cut(s) | 358, 460, 1088, 1598, 3546 |
| Bsp13I | TCCGGA | 1 cut(s) | 2380 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3069 |
| Bsp19I | CCATGG | 1 cut(s) | 3680 |
| BspACI | CCGC | 9 cut(s) | 644, 1955, 1990, 2099, 2351, 2596, 2603, 3481, 3906 |
| BspANI | GGCC | 6 cut(s) | 250, 2304, 2308, 3239, 3847, 3905 |
| BspEI | TCCGGA | 1 cut(s) | 2380 |
| BspFNI | CGCG | 3 cut(s) | 646, 2605, 3315 |
| BspHI | TCATGA | 2 cut(s) | 300, 2257 |
| BspMAI | CTGCAG | 3 cut(s) | 623, 1732, 3970 |
| BspMI | ACCTGC | 1 cut(s) | 3946 |
| BspQI | GCTCTTC | 2 cut(s) | 1428, 3162 |
| BspT104I | TTCGAA | 1 cut(s) | 3332 |
| BspTI | CTTAAG | 1 cut(s) | 3173 |
| BsrBI | CCGCTC | 1 cut(s) | 1990 |
| BsrDI | GCAATG | 3 cut(s) | 862, 1325, 3902 |
| BsrFI | RCCGGY | 1 cut(s) | 2304 |
| BssAI | RCCGGY | 1 cut(s) | 2304 |
| BssSI | CACGAG | 1 cut(s) | 762 |
| BssT1I | CCWWGG | 5 cut(s) | 320, 887, 1628, 3648, 3680 |
| Bst2BI | CACGAG | 1 cut(s) | 762 |
| Bst6I | CTCTTC | 4 cut(s) | 1047, 1428, 1580, 3162 |
| BstAFI | CTTAAG | 1 cut(s) | 3173 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1130, 1234, 2146, 2938 |
| BstBAI | YACGTR | 2 cut(s) | 9, 689 |
| BstBI | TTCGAA | 1 cut(s) | 3332 |
| BstC8I | GCNNGC | 9 cut(s) | 456, 1126, 1454, 2306, 2452, 2554, 3922, 3953, 3973 |
| BstDSI | CCRYGG | 2 cut(s) | 3402, 3680 |
| BstEII | GGTNACC | 1 cut(s) | 1740 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 538 |
| BstFNI | CGCG | 3 cut(s) | 646, 2605, 3315 |
| BstHHI | GCGC | 2 cut(s) | 1121, 3315 |
| BstMAI | GTCTC | 3 cut(s) | 1727, 2565, 2831 |
| BstMCI | CGRYCG | 1 cut(s) | 2823 |
| BstNSI | RCATGY | 4 cut(s) | 214, 1456, 3443, 3854 |
| BstPI | GGTNACC | 1 cut(s) | 1740 |
| BstSFI | CTRYAG | 3 cut(s) | 619, 1728, 3966 |
| BstSLI | GKGCMC | 2 cut(s) | 460, 3546 |
| BstUI | CGCG | 3 cut(s) | 646, 2605, 3315 |
| BstX2I | RGATCY | 9 cut(s) | 184, 343, 370, 724, 793, 829, 1992, 2650, 3160 |
| BstYI | RGATCY | 9 cut(s) | 184, 343, 370, 724, 793, 829, 1992, 2650, 3160 |
| BsuI | GTATCC | 1 cut(s) | 1874 |
| BsuRI | GGCC | 6 cut(s) | 250, 2304, 2308, 3239, 3847, 3905 |
| BtgI | CCRYGG | 2 cut(s) | 3402, 3680 |
| BtgZI | GCGATG | 2 cut(s) | 2694, 3509 |
| BtsI | GCAGTG | 2 cut(s) | 1101, 2361 |
| BtsIMutI | CAGTG | 6 cut(s) | 603, 1101, 1395, 1867, 2361, 2895 |
| BveI | ACCTGC | 1 cut(s) | 3946 |
| Cac8I | GCNNGC | 9 cut(s) | 456, 1126, 1454, 2306, 2452, 2554, 3922, 3953, 3973 |
| CaiI | CAGNNNCTG | 3 cut(s) | 727, 1100, 1394 |
| CciI | TCATGA | 2 cut(s) | 300, 2257 |
| CfoI | GCGC | 2 cut(s) | 1121, 3315 |
| Cfr10I | RCCGGY | 1 cut(s) | 2304 |
| Cfr13I | GGNCC | 6 cut(s) | 2302, 2794, 2954, 3383, 3903, 4000 |
| CseI | GACGC | 1 cut(s) | 635 |
| CsiI | ACCWGGT | 1 cut(s) | 3996 |
| Csp6I | GTAC | 9 cut(s) | 87, 119, 175, 518, 1175, 2279, 2685, 3032, 3095 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3336, 3371 |
| CviQI | GTAC | 9 cut(s) | 87, 119, 175, 518, 1175, 2279, 2685, 3032, 3095 |
| DraI | TTTAAA | 1 cut(s) | 2434 |
| EaeI | YGGCCR | 2 cut(s) | 2306, 3237 |
| Eam1104I | CTCTTC | 4 cut(s) | 1047, 1428, 1580, 3162 |
| EarI | CTCTTC | 4 cut(s) | 1047, 1428, 1580, 3162 |
| Ecl136II | GAGCTC | 1 cut(s) | 1596 |
| Eco130I | CCWWGG | 5 cut(s) | 320, 887, 1628, 3648, 3680 |
| Eco147I | AGGCCT | 1 cut(s) | 250 |
| Eco24I | GRGCYC | 1 cut(s) | 1598 |
| Eco32I | GATATC | 1 cut(s) | 712 |
| Eco47I | GGWCC | 4 cut(s) | 2794, 2954, 3383, 4000 |
| Eco53kI | GAGCTC | 1 cut(s) | 1596 |
| Eco57I | CTGAAG | 4 cut(s) | 561, 1020, 1827, 2400 |
| Eco72I | CACGTG | 1 cut(s) | 9 |
| Eco88I | CYCGRG | 1 cut(s) | 1089 |
| Eco91I | GGTNACC | 1 cut(s) | 1740 |
| EcoICRI | GAGCTC | 1 cut(s) | 1596 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 538 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4000 |
| EcoO65I | GGTNACC | 1 cut(s) | 1740 |
| EcoRI | GAATTC | 2 cut(s) | 296, 1012 |
| EcoRV | GATATC | 1 cut(s) | 712 |
| EcoT14I | CCWWGG | 5 cut(s) | 320, 887, 1628, 3648, 3680 |
| EcoT22I | ATGCAT | 2 cut(s) | 1458, 3804 |
| EcoT38I | GRGCYC | 1 cut(s) | 1598 |
| ErhI | CCWWGG | 5 cut(s) | 320, 887, 1628, 3648, 3680 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 698, 730 |
| FaqI | GGGAC | 3 cut(s) | 1268, 2117, 3986 |
| FauI | CCCGC | 1 cut(s) | 1962 |
| FriOI | GRGCYC | 1 cut(s) | 1598 |
| FseI | GGCCGGCC | 1 cut(s) | 2308 |
| FspBI | CTAG | 8 cut(s) | 141, 888, 1110, 1629, 1698, 1905, 2502, 3398 |
| GlaI | GCGC | 2 cut(s) | 1120, 3314 |
| GsaI | CCCAGC | 1 cut(s) | 3904 |
| GsuI | CTGGAG | 5 cut(s) | 204, 1392, 1760, 2544, 2826 |
| HaeIII | GGCC | 6 cut(s) | 250, 2304, 2308, 3239, 3847, 3905 |
| HapII | CCGG | 3 cut(s) | 2305, 2381, 2943 |
| HgaI | GACGC | 1 cut(s) | 635 |
| HhaI | GCGC | 2 cut(s) | 1121, 3315 |
| Hin6I | GCGC | 2 cut(s) | 1119, 3313 |
| HinP1I | GCGC | 2 cut(s) | 1119, 3313 |
| HincII | GTYRAC | 1 cut(s) | 744 |
| HindII | GTYRAC | 1 cut(s) | 744 |
| HindIII | AAGCTT | 2 cut(s) | 2396, 3335 |
| HpaII | CCGG | 3 cut(s) | 2305, 2381, 2943 |
| Hpy166II | GTNNAC | 9 cut(s) | 119, 316, 744, 985, 1865, 3095, 3544, 3832, 3933 |
| Hpy8I | GTNNAC | 9 cut(s) | 119, 316, 744, 985, 1865, 3095, 3544, 3832, 3933 |
| Hpy99I | CGWCG | 2 cut(s) | 152, 3477 |
| HpyAV | CCTTC | 9 cut(s) | 435, 654, 1155, 1225, 1323, 1362, 1549, 2172, 2672 |
| HpyCH4IV | ACGT | 3 cut(s) | 8, 688, 2178 |
| HpySE526I | ACGT | 3 cut(s) | 8, 688, 2178 |
| HspAI | GCGC | 2 cut(s) | 1119, 3313 |
| Kpn2I | TCCGGA | 1 cut(s) | 2380 |
| KroI | GCCGGC | 1 cut(s) | 2304 |
| KroNI | GCCGGC | 1 cut(s) | 2306 |
| LguI | GCTCTTC | 2 cut(s) | 1428, 3162 |
| LweI | GCATC | 4 cut(s) | 720, 790, 1267, 3490 |
| MabI | ACCWGGT | 1 cut(s) | 3996 |
| MaeI | CTAG | 8 cut(s) | 141, 888, 1110, 1629, 1698, 1905, 2502, 3398 |
| MaeII | ACGT | 3 cut(s) | 8, 688, 2178 |
| MaeIII | GTNAC | 8 cut(s) | 429, 503, 1740, 2062, 2333, 2891, 3406, 3652 |
| MbiI | CCGCTC | 1 cut(s) | 1990 |
| MfeI | CAATTG | 1 cut(s) | 2094 |
| MflI | RGATCY | 9 cut(s) | 184, 343, 370, 724, 793, 829, 1992, 2650, 3160 |
| MhlI | GDGCHC | 5 cut(s) | 358, 460, 1088, 1598, 3546 |
| MlsI | TGGCCA | 1 cut(s) | 3239 |
| MluNI | TGGCCA | 1 cut(s) | 3239 |
| MlyI | GAGTC | 8 cut(s) | 53, 917, 1297, 2096, 2279, 2546, 2833, 2894 |
| MmeI | TCCRAC | 2 cut(s) | 220, 655 |
| Mox20I | TGGCCA | 1 cut(s) | 3239 |
| Mph1103I | ATGCAT | 2 cut(s) | 1458, 3804 |
| MroI | TCCGGA | 1 cut(s) | 2380 |
| MroNI | GCCGGC | 1 cut(s) | 2304 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1012, 2925 |
| MscI | TGGCCA | 1 cut(s) | 3239 |
| MseI | TTAA | 6 cut(s) | 701, 2433, 2589, 3174, 3243, 3702 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3348 |
| Msp20I | TGGCCA | 1 cut(s) | 3239 |
| MspA1I | CMGCKG | 2 cut(s) | 1727, 3022 |
| MspCI | CTTAAG | 1 cut(s) | 3173 |
| MspI | CCGG | 3 cut(s) | 2305, 2381, 2943 |
| MunI | CAATTG | 1 cut(s) | 2094 |
| Mva1269I | GAATGC | 2 cut(s) | 857, 3070 |
| MvnI | CGCG | 3 cut(s) | 646, 2605, 3315 |
| NaeI | GCCGGC | 1 cut(s) | 2306 |
| NciI | CCSGG | 1 cut(s) | 2943 |
| NcoI | CCATGG | 1 cut(s) | 3680 |
| NgoMIV | GCCGGC | 1 cut(s) | 2304 |
| NmuCI | GTSAC | 3 cut(s) | 1740, 2891, 3406 |
| NsiI | ATGCAT | 2 cut(s) | 1458, 3804 |
| NspI | RCATGY | 4 cut(s) | 214, 1456, 3443, 3854 |
| NspV | TTCGAA | 1 cut(s) | 3332 |
| PaeI | GCATGC | 1 cut(s) | 1456 |
| PaeR7I | CTCGAG | 1 cut(s) | 1089 |
| PagI | TCATGA | 2 cut(s) | 300, 2257 |
| PaqCI | CACCTGC | 1 cut(s) | 3946 |
| PasI | CCCWGGG | 2 cut(s) | 1286, 1998 |
| PceI | AGGCCT | 1 cut(s) | 250 |
| PciI | ACATGT | 1 cut(s) | 3850 |
| PciSI | GCTCTTC | 2 cut(s) | 1428, 3162 |
| PctI | GAATGC | 2 cut(s) | 857, 3070 |
| PdiI | GCCGGC | 1 cut(s) | 2306 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1012, 2925 |
| PflFI | GACNNNGTC | 1 cut(s) | 1738 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2059, 2675 |
| PfoI | TCCNGGA | 3 cut(s) | 180, 1776, 1876 |
| PleI | GAGTC | 8 cut(s) | 53, 917, 1297, 2096, 2278, 2545, 2833, 2894 |
| PmaCI | CACGTG | 1 cut(s) | 9 |
| PmlI | CACGTG | 1 cut(s) | 9 |
| PpsI | GAGTC | 8 cut(s) | 53, 917, 1297, 2096, 2278, 2545, 2833, 2894 |
| Ppu21I | YACGTR | 2 cut(s) | 9, 689 |
| PpuMI | RGGWCCY | 1 cut(s) | 4000 |
| PscI | ACATGT | 1 cut(s) | 3850 |
| PshBI | ATTAAT | 1 cut(s) | 2589 |
| Psp124BI | GAGCTC | 1 cut(s) | 1598 |
| Psp5II | RGGWCCY | 1 cut(s) | 4000 |
| PspCI | CACGTG | 1 cut(s) | 9 |
| PspEI | GGTNACC | 1 cut(s) | 1740 |
| PspFI | CCCAGC | 1 cut(s) | 3900 |
| PspPI | GGNCC | 6 cut(s) | 2302, 2794, 2954, 3383, 3903, 4000 |
| PspPPI | RGGWCCY | 1 cut(s) | 4000 |
| PspXI | VCTCGAGB | 1 cut(s) | 1089 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2227, 2259 |
| PstI | CTGCAG | 3 cut(s) | 623, 1732, 3970 |
| PstNI | CAGNNNCTG | 3 cut(s) | 727, 1100, 1394 |
| PsuI | RGATCY | 9 cut(s) | 184, 343, 370, 724, 793, 829, 1992, 2650, 3160 |
| PsyI | GACNNNGTC | 1 cut(s) | 1738 |
| PvuII | CAGCTG | 2 cut(s) | 1727, 3022 |
| RigI | GGCCGGCC | 1 cut(s) | 2308 |
| RsaI | GTAC | 9 cut(s) | 88, 120, 176, 519, 1176, 2280, 2686, 3033, 3096 |
| RsaNI | GTAC | 9 cut(s) | 87, 119, 175, 518, 1175, 2279, 2685, 3032, 3095 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3348 |
| SacI | GAGCTC | 1 cut(s) | 1598 |
| SapI | GCTCTTC | 2 cut(s) | 1428, 3162 |
| SaqAI | TTAA | 6 cut(s) | 701, 2433, 2589, 3174, 3243, 3702 |
| Sau96I | GGNCC | 6 cut(s) | 2302, 2794, 2954, 3383, 3903, 4000 |
| ScaI | AGTACT | 1 cut(s) | 1176 |
| SchI | GAGTC | 8 cut(s) | 53, 917, 1297, 2096, 2279, 2546, 2833, 2894 |
| SduI | GDGCHC | 5 cut(s) | 358, 460, 1088, 1598, 3546 |
| SexAI | ACCWGGT | 1 cut(s) | 3996 |
| SfaNI | GCATC | 4 cut(s) | 720, 790, 1267, 3490 |
| SfcI | CTRYAG | 3 cut(s) | 619, 1728, 3966 |
| Sfr274I | CTCGAG | 1 cut(s) | 1089 |
| SfuI | TTCGAA | 1 cut(s) | 3332 |
| SinI | GGWCC | 4 cut(s) | 2794, 2954, 3383, 4000 |
| SlaI | CTCGAG | 1 cut(s) | 1089 |
| SmiI | ATTTAAAT | 1 cut(s) | 2434 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3348 |
| SmlI | CTYRAG | 5 cut(s) | 1089, 2267, 2692, 2999, 3173 |
| SmoI | CTYRAG | 5 cut(s) | 1089, 2267, 2692, 2999, 3173 |
| SphI | GCATGC | 1 cut(s) | 1456 |
| SseBI | AGGCCT | 1 cut(s) | 250 |
| SsiI | CCGC | 9 cut(s) | 644, 1955, 1990, 2099, 2351, 2596, 2603, 3481, 3906 |
| SspI | AATATT | 1 cut(s) | 2230 |
| SspMI | CTAG | 8 cut(s) | 141, 888, 1110, 1629, 1698, 1905, 2502, 3398 |
| SstI | GAGCTC | 1 cut(s) | 1598 |
| StuI | AGGCCT | 1 cut(s) | 250 |
| StyI | CCWWGG | 5 cut(s) | 320, 887, 1628, 3648, 3680 |
| SwaI | ATTTAAAT | 1 cut(s) | 2434 |
| TaiI | ACGT | 3 cut(s) | 11, 691, 2181 |
| TaqI | TCGA | 7 cut(s) | 556, 1090, 1543, 1786, 1851, 3105, 3332 |
| TaqII | GACCGA | 2 cut(s) | 1860, 2837 |
| TatI | WGTACW | 1 cut(s) | 1174 |
| TauI | GCSGC | 4 cut(s) | 646, 2354, 3484, 3908 |
| Tru1I | TTAA | 6 cut(s) | 701, 2433, 2589, 3174, 3243, 3702 |
| Tru9I | TTAA | 6 cut(s) | 701, 2433, 2589, 3174, 3243, 3702 |
| TscAI | CASTG | 6 cut(s) | 603, 1101, 1395, 1867, 2361, 2902 |
| TseFI | GTSAC | 3 cut(s) | 1740, 2891, 3406 |
| Tsp45I | GTSAC | 3 cut(s) | 1740, 2891, 3406 |
| TspGWI | ACGGA | 4 cut(s) | 165, 771, 3822, 3950 |
| TspRI | CASTG | 6 cut(s) | 603, 1101, 1395, 1867, 2361, 2902 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1738 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2059, 2675 |
| Vha464I | CTTAAG | 1 cut(s) | 3173 |
| VneI | GTGCAC | 1 cut(s) | 3542 |
| VpaK11BI | GGWCC | 4 cut(s) | 2794, 2954, 3383, 4000 |
| VspI | ATTAAT | 1 cut(s) | 2589 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 538 |
| XbaI | TCTAGA | 1 cut(s) | 1904 |
| XceI | RCATGY | 4 cut(s) | 214, 1456, 3443, 3854 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1283, 2433 |
| XhoI | CTCGAG | 1 cut(s) | 1089 |
| XmaJI | CCTAGG | 2 cut(s) | 887, 1628 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1012, 2925 |
| XspI | CTAG | 8 cut(s) | 141, 888, 1110, 1629, 1698, 1905, 2502, 3398 |
| ZrmI | AGTACT | 1 cut(s) | 1176 |
| Zsp2I | ATGCAT | 2 cut(s) | 1458, 3804 |