PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35050 AT2G35050 |
| fragaria_vesca | FvH4_3g12590 FvH4_3g12590 FvH4_3g12590 |
| malus_domestica | MD05G1249500.v1.1 MD10G1168200.v1.1 MD10G1229900.v1.1 |
| prunus_persica | Prupe.4G114600_v2.0.a1 Prupe.4G114600_v2.0.a1 |
| pyrus_communis | pycom05g22660 pycom05g22670 pycom10g19340 pycom10g19350 |
| rosa_chinensis | RchiOBHm_Chr2g0086691 RchiOBHm_Chr5g0020551 |
| rosa_laevigata | RLG00000032538 |
| rosa_multiflora | Rmu_sc0004626.1_g000009 Rmu_sc0009745.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057740 Rroxscaffold_4G00315010 |
| rosa_rugosa | Rorug01G0468600 Rorug05G0060400 Rorug05G0060500 Rorug05G0060600 Rorug05G0060600 |
| rosa_samantha | Rh2AG020600 Rh2BG020400 Rh5AG151100 Rh5BG150500 Rh5CG162000 Rh5DG149900 |
| rosa_wichuraiana | Rw5G013370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 136 |
| AciI | CCGC | 1 cut(s) | 136 |
| AcuI | CTGAAG | 1 cut(s) | 108 |
| AfaI | GTAC | 2 cut(s) | 219, 365 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 196 |
| AluBI | AGCT | 1 cut(s) | 203 |
| AluI | AGCT | 1 cut(s) | 203 |
| Ama87I | CYCGRG | 2 cut(s) | 229, 375 |
| AoxI | GGCC | 3 cut(s) | 162, 226, 372 |
| ApeKI | GCWGC | 1 cut(s) | 80 |
| AspS9I | GGNCC | 2 cut(s) | 227, 373 |
| AsuC2I | CCSGG | 4 cut(s) | 230, 231, 376, 377 |
| AvaI | CYCGRG | 2 cut(s) | 229, 375 |
| BbvI | GCAGC | 1 cut(s) | 67 |
| BccI | CCATC | 3 cut(s) | 173, 218, 364 |
| BcnI | CCSGG | 4 cut(s) | 230, 231, 376, 377 |
| BfaI | CTAG | 1 cut(s) | 114 |
| BfmI | CTRYAG | 1 cut(s) | 16 |
| BisI | GCNGC | 1 cut(s) | 81 |
| BlsI | GCNGC | 1 cut(s) | 82 |
| Bme1390I | CCNGG | 4 cut(s) | 230, 231, 376, 377 |
| BmeT110I | CYCGRG | 2 cut(s) | 229, 375 |
| BmgT120I | GGNCC | 2 cut(s) | 227, 373 |
| BmiI | GGNNCC | 1 cut(s) | 37 |
| BmrFI | CCNGG | 4 cut(s) | 230, 231, 376, 377 |
| BmsI | GCATC | 1 cut(s) | 67 |
| BpuMI | CCSGG | 4 cut(s) | 230, 231, 376, 377 |
| BsaJI | CCNNGG | 3 cut(s) | 55, 229, 375 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 225, 255 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 196 |
| Bse3DI | GCAATG | 1 cut(s) | 345 |
| BseDI | CCNNGG | 3 cut(s) | 55, 229, 375 |
| BseGI | GGATG | 2 cut(s) | 144, 349 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 196 |
| BseMI | GCAATG | 1 cut(s) | 345 |
| BseXI | GCAGC | 1 cut(s) | 67 |
| BshFI | GGCC | 3 cut(s) | 164, 228, 374 |
| BsiHKCI | CYCGRG | 2 cut(s) | 229, 375 |
| BsiSI | CCGG | 2 cut(s) | 230, 376 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 196 |
| BsnI | GGCC | 3 cut(s) | 164, 228, 374 |
| BsoBI | CYCGRG | 2 cut(s) | 229, 375 |
| Bsp19I | CCATGG | 1 cut(s) | 55 |
| BspACI | CCGC | 1 cut(s) | 136 |
| BspANI | GGCC | 3 cut(s) | 164, 228, 374 |
| BspLI | GGNNCC | 1 cut(s) | 37 |
| BsrBI | CCGCTC | 1 cut(s) | 136 |
| BsrDI | GCAATG | 1 cut(s) | 345 |
| BssECI | CCNNGG | 3 cut(s) | 55, 229, 375 |
| BssT1I | CCWWGG | 1 cut(s) | 55 |
| Bst4CI | ACNGT | 1 cut(s) | 250 |
| Bst6I | CTCTTC | 1 cut(s) | 299 |
| BstDEI | CTNAG | 1 cut(s) | 278 |
| BstDSI | CCRYGG | 1 cut(s) | 55 |
| BstF5I | GGATG | 2 cut(s) | 144, 349 |
| BstSCI | CCNGG | 4 cut(s) | 228, 229, 374, 375 |
| BstSFI | CTRYAG | 1 cut(s) | 16 |
| BstV1I | GCAGC | 1 cut(s) | 67 |
| BsuRI | GGCC | 3 cut(s) | 164, 228, 374 |
| BtgI | CCRYGG | 1 cut(s) | 55 |
| BtsCI | GGATG | 2 cut(s) | 144, 349 |
| Cfr13I | GGNCC | 2 cut(s) | 227, 373 |
| Cfr9I | CCCGGG | 2 cut(s) | 229, 375 |
| Csp6I | GTAC | 2 cut(s) | 218, 364 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 327, 362 |
| CviAII | CATG | 1 cut(s) | 56 |
| CviJI | RGCY | 6 cut(s) | 15, 121, 164, 203, 228, 374 |
| CviKI_1 | RGCY | 6 cut(s) | 15, 121, 164, 203, 228, 374 |
| CviQI | GTAC | 2 cut(s) | 218, 364 |
| DdeI | CTNAG | 1 cut(s) | 278 |
| Eam1104I | CTCTTC | 1 cut(s) | 299 |
| EarI | CTCTTC | 1 cut(s) | 299 |
| Eco130I | CCWWGG | 1 cut(s) | 55 |
| Eco57I | CTGAAG | 1 cut(s) | 108 |
| Eco88I | CYCGRG | 2 cut(s) | 229, 375 |
| EcoT14I | CCWWGG | 1 cut(s) | 55 |
| ErhI | CCWWGG | 1 cut(s) | 55 |
| FaeI | CATG | 1 cut(s) | 59 |
| FaiI | YATR | 3 cut(s) | 57, 210, 263 |
| FatI | CATG | 1 cut(s) | 55 |
| Fnu4HI | GCNGC | 1 cut(s) | 81 |
| FokI | GGATG | 2 cut(s) | 151, 356 |
| Fsp4HI | GCNGC | 1 cut(s) | 81 |
| FspBI | CTAG | 1 cut(s) | 114 |
| GluI | GCNGC | 1 cut(s) | 81 |
| HaeIII | GGCC | 3 cut(s) | 164, 228, 374 |
| HapII | CCGG | 2 cut(s) | 230, 376 |
| Hin1II | CATG | 1 cut(s) | 59 |
| HinfI | GANTC | 1 cut(s) | 93 |
| HpaII | CCGG | 2 cut(s) | 230, 376 |
| Hpy188I | TCNGA | 1 cut(s) | 127 |
| Hpy188III | TCNNGA | 2 cut(s) | 33, 154 |
| HpyAV | CCTTC | 1 cut(s) | 132 |
| HpyCH4III | ACNGT | 1 cut(s) | 250 |
| HpyCH4IV | ACGT | 1 cut(s) | 325 |
| HpyCH4V | TGCA | 5 cut(s) | 83, 184, 292, 321, 338 |
| HpyF3I | CTNAG | 1 cut(s) | 278 |
| HpySE526I | ACGT | 1 cut(s) | 325 |
| Hsp92II | CATG | 1 cut(s) | 59 |
| LmnI | GCTCC | 1 cut(s) | 133 |
| LpnPI | CCDG | 5 cut(s) | 18, 116, 139, 243, 380 |
| Lsp1109I | GCAGC | 1 cut(s) | 67 |
| LweI | GCATC | 1 cut(s) | 67 |
| MaeI | CTAG | 1 cut(s) | 114 |
| MaeII | ACGT | 1 cut(s) | 325 |
| MaeIII | GTNAC | 1 cut(s) | 250 |
| MbiI | CCGCTC | 1 cut(s) | 136 |
| MboII | GAAGA | 3 cut(s) | 40, 307, 316 |
| MluCI | AATT | 1 cut(s) | 23 |
| MnlI | CCTC | 4 cut(s) | 60, 154, 182, 227 |
| MseI | TTAA | 1 cut(s) | 267 |
| MslI | CAYNNNNRTG | 1 cut(s) | 192 |
| MspI | CCGG | 2 cut(s) | 230, 376 |
| MspR9I | CCNGG | 4 cut(s) | 230, 231, 376, 377 |
| NciI | CCSGG | 4 cut(s) | 230, 231, 376, 377 |
| NcoI | CCATGG | 1 cut(s) | 55 |
| NlaIII | CATG | 1 cut(s) | 59 |
| NlaIV | GGNNCC | 1 cut(s) | 37 |
| NmuCI | GTSAC | 1 cut(s) | 250 |
| PfeI | GAWTC | 1 cut(s) | 93 |
| PkrI | GCNGC | 1 cut(s) | 82 |
| PspN4I | GGNNCC | 1 cut(s) | 37 |
| PspPI | GGNCC | 2 cut(s) | 227, 373 |
| RsaI | GTAC | 2 cut(s) | 219, 365 |
| RsaNI | GTAC | 2 cut(s) | 218, 364 |
| RseI | CAYNNNNRTG | 1 cut(s) | 192 |
| SaqAI | TTAA | 1 cut(s) | 267 |
| SatI | GCNGC | 1 cut(s) | 81 |
| Sau96I | GGNCC | 2 cut(s) | 227, 373 |
| ScrFI | CCNGG | 4 cut(s) | 230, 231, 376, 377 |
| SetI | ASST | 7 cut(s) | 41, 107, 174, 205, 238, 328, 369 |
| SfaNI | GCATC | 1 cut(s) | 67 |
| SfcI | CTRYAG | 1 cut(s) | 16 |
| SmaI | CCCGGG | 2 cut(s) | 231, 377 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 192 |
| Sse9I | AATT | 1 cut(s) | 23 |
| SsiI | CCGC | 1 cut(s) | 136 |
| SspMI | CTAG | 1 cut(s) | 114 |
| StyD4I | CCNGG | 4 cut(s) | 228, 229, 374, 375 |
| StyI | CCWWGG | 1 cut(s) | 55 |
| TaaI | ACNGT | 1 cut(s) | 250 |
| TaiI | ACGT | 1 cut(s) | 328 |
| TasI | AATT | 1 cut(s) | 23 |
| TatI | WGTACW | 1 cut(s) | 217 |
| TfiI | GAWTC | 1 cut(s) | 93 |
| Tru1I | TTAA | 1 cut(s) | 267 |
| Tru9I | TTAA | 1 cut(s) | 267 |
| TseFI | GTSAC | 1 cut(s) | 250 |
| TseI | GCWGC | 1 cut(s) | 80 |
| Tsp45I | GTSAC | 1 cut(s) | 250 |
| TspMI | CCCGGG | 2 cut(s) | 229, 375 |
| XmaI | CCCGGG | 2 cut(s) | 229, 375 |
| XspI | CTAG | 1 cut(s) | 114 |