Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002965

Physical Location & Seq

Genomic Coordinates Reverse (-)

29933972 .. 29939498

Gene Structure 5527 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g34550.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGGCTTCTTCGACCTTTGCATACCCTACACCGACCACCCGCCGCCGGACCGCTCAACCCGCGCAAAGCTCGTGACCAAGGCCCTCGAGCTCGGCTACTCCGGCGTCGCCTACAACCGTACGATCAAGGGCGTCATGTCCGATCGCGACCGTTGCTCCATCCCCCTTCTTTCTCTCCCTTCTCTCCTCAAACTCTCTCCCCACCTCACCTCCTCCGTCGCCTTCCACCGCGACCTCCTCGCCGTCCCACGCGCCACCCCTTTCCGCCAGTACACGCGCCTCACCGTCTGCGCCGACACCCCTGCTCAAGCCCAGGCCCTCAACTCAGGCAACCCCATTTTGAAGACCTACGACTTGGTGGCTGTCAAGCCCATGAACCAGTCCGCTTTCGATCAGGCCTGTGAGAAGTTGGAGGTAGATATAATTGCCATTGATTTTTCGGAGAAGTTGCCGTTTCGATTGAAGCAGCCTCTGGTTAAAGCTGCCATTGAGCGGAAAGTGTATTTTGAGATCACATACGCCGGGTTTATTGCTGATGTTCAAACAAGGAGGCAAATTATAACCAATGCTAAGTTACTTGTAGATTGGAGTCGAGGAAGGAATATAATTATCTCTAGTGCTGCCCCAACTGCAAATGAATTTAGAGGGCCCTATGATGTTGCAAACTTAATGTCATTGCTTGGTCTCTCTGTGGAACGAGCTAAAGCAGCTATTTCAAGAAATTGTAGGACTCTCTTATCTAATGCAGTGAGAAAAAAACACTATCATAAGGAAGCCATTAGAGTTGAAGTACTACCATCAAGTCAAGAAATTGATGGGAACAAATCCTGGTCTAGTGATTGGGATCCCATATCCAGTGGCGAAGGTGATTTGCTTTTAGATGATTTGGCAAAAGCTTTCAGTAATTCCAGTACTAAAGCAACCAAAACGGTCAAAGCCATTGATTTTGCTTCGGTTATTGACAGCACGCCATCACTTGGATTTCAAGTGAACGATCTTATATCTGGAACTAATGTGGTTGTGTCACAACCATTGGCTACTCAGAAAAACATCCTTTCTGCTCCCCAGCTAAATGTGCAATTAGTTGCAAATAATGGAGTACAAGAACAATCTGTTATAAATGATACTATGTTGGAGCAGCGAAGGTTCAAAAGTGAAAATCCTCAGAAATTGTATTCATCTTGTGATACTACCAAAGCTGTTACCAGTGTTATTGCAATTGAAGATCGTACGATAACCACTAGAGTAGAACCAAATATTCCAGATGAAACTGGTGGGATTACTACAGAAACACTTGATGTGGAATCACAGAAGTCTGGGATTGCAAATGCTTCTATGGAAATTGAAGTTCCTACAACCACTGGACAAGAACCCATGAATTCAGCTGAATCAATGGGGATTACAGTAGAAACTCATGATGTGCAATCACTGAAGTCTGTGACTGCTGAAACTTTTGAAGATGCTATGGAAGTTGAAGCTCCTACGACCACTGGAGTGGAAACAAAGAATCCAGATGGAATAGATGGGGTTGCTACAGAAATTTATGATGTGCAATCACAGAAGAGTATGACTAATAGTGAAGTGAATGTTGTGCCACCTCAGGTCAATTTAACATTTTATGCACTAGACATTGGGTTGAGTTCTGCTTCAAATACTGATTCTGAAGTTCAAGTTCCCACTAATTATCAGGACAGTGATATTCCCGGTCCTCATAGTGAGGAGGCTGATAGTTGTAGAAGTGGTGATATACAAAGTGATCTAATGGATGACGTTCTAACAGGTAAAGCAAAAAACTCTTTGCCTCTGGATTCTGCCTTGGATAAAAGTACTCCGGAAATGGATGAATTGAGGGAATCTGGAGATGATGCAGTTGTACTGGCAAATCAAGTTCCTGTTCTGGATTCTAATGTTGAGATGATAGTAGCTTGTGATTATTCAGTTGCAAATCATGGGACAGCAGAGGTGATAATGGATGAGCAAGAACATGGGAAAACTGATGGTGAATTGAGCTATCCAGCCTTGGTTCAATCTGAATCAGGGAAATCCAAGGCAAAACGAAAAAAACCTCACCAGGTGATATTGCTTCCTCTCAAGCGATTACTGCATACTAAACCTTTTAAAAGGGCTCGGAAAAGTAAAAGGAGACATAAGATGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0099116 GO:1901360 GO:1901363 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

CCT RNase_P_p30

Protein Analysis

720

Amino Acids

78.6

Weight (kDa)

5.3

Isoelectric Point (pI)

45.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_P_p30	PF01876	4 - 241	1.3e-52	RNase P subunit p30

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59980 AT5G59980 AT5G59980 AT5G59980
fragaria_vesca	FvH4_3g34550 FvH4_3g34550
malus_domestica	MD11G1117900.v1.1
prunus_persica	Prupe.6G088000_v2.0.a1 Prupe.6G088000_v2.0.a1
pyrus_communis	pycom03g08460 pycom11g09880
rosa_chinensis	RchiOBHm_Chr4g0385531 RchiOBHm_Chr5g0062191
rosa_laevigata	RLG00000010219 RLG00000035541
rosa_multiflora	Rmu_co8004892.1_g000001 Rmu_sc0014282.1_g000010 Rmu_sc0018073.1_g000001 Rmu_ssc0000409.1_g000011
rosa_roxburghii	Rroxscaffold_1G00018520 Rroxscaffold_5G00333410
rosa_rugosa	Rorug05G0347200 Rorug07G0171200 Rorug07G0171200 Rorug07G0171300
rosa_samantha	Rh4AG006400 Rh4DG005200 Rh5AG407700 Rh5BG421400 Rh5CG445400 Rh5DG436400 Rh7AG313200 Rh7BG303900 Rh7CG331600 Rh7DG312000
rosa_wichuraiana	Rw5G038420 Rw7G026520 Rw7G028230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	560, 1118
AccB7I	CCANNNNNTGG	1 cut(s)	977
AccBSI	CCGCTC	2 cut(s)	54, 493
AccII	CGCG	5 cut(s)	63, 147, 231, 252, 277
AccIII	TCCGGA	1 cut(s)	1831
AciI	CCGC	8 cut(s)	41, 44, 52, 61, 229, 265, 384, 493
AclWI	GGATC	2 cut(s)	839, 852
AcsI	RAATTY	3 cut(s)	638, 1378, 1539
AcuI	CTGAAG	2 cut(s)	1451, 1683
AcyI	GRCGYC	2 cut(s)	105, 132
AdeI	CACNNNGTG	1 cut(s)	2074
AfaI	GTAC	8 cut(s)	121, 272, 792, 913, 1101, 1231, 1828, 1875
AfiI	CCNNNNNNNGG	3 cut(s)	46, 492, 977
AjnI	CCWGG	3 cut(s)	312, 827, 2070
AleI	CACNNNNGTG	1 cut(s)	1493
Alw21I	GWGCWC	1 cut(s)	93
Alw26I	GTCTC	2 cut(s)	689, 2137
AlwI	GGATC	2 cut(s)	839, 852
AlwNI	CAGNNNCTG	1 cut(s)	472
Ama87I	CYCGRG	1 cut(s)	86
Aor13HI	TCCGGA	1 cut(s)	1831
AoxI	GGCC	4 cut(s)	81, 315, 396, 647
ApaI	GGGCCC	1 cut(s)	651
ApeKI	GCWGC	5 cut(s)	466, 482, 620, 707, 1138
ApoI	RAATTY	3 cut(s)	638, 1378, 1539
ArsI	GACNNNNNNTTYG	2 cut(s)	656, 688
AspLEI	GCGC	4 cut(s)	65, 254, 279, 293
AspS9I	GGNCC	6 cut(s)	49, 82, 316, 647, 648, 1706
AsuC2I	CCSGG	2 cut(s)	523, 1704
AsuHPI	GGTGA	8 cut(s)	199, 274, 878, 1754, 1975, 2012, 2060, 2086
AvaI	CYCGRG	1 cut(s)	86
AvaII	GGWCC	2 cut(s)	49, 1706
AxyI	CCTNAGG	1 cut(s)	1599
BaeGI	GKGCMC	1 cut(s)	651
BamHI	GGATCC	1 cut(s)	844
BanII	GRGCYC	3 cut(s)	93, 651, 2128
BauI	CACGAG	1 cut(s)	71
BbsI	GAAGAC	1 cut(s)	350
Bbv12I	GWGCWC	1 cut(s)	93
BbvI	GCAGC	5 cut(s)	469, 478, 607, 719, 1150
BccI	CCATC	8 cut(s)	167, 805, 809, 979, 1508, 1517, 1991, 2146
BceAI	ACGGC	2 cut(s)	227, 436
BcgI	CGANNNNNNTGC	2 cut(s)	284, 318
BciT130I	CCWGG	3 cut(s)	314, 829, 2072
BcnI	CCSGG	2 cut(s)	523, 1704
BcoDI	GTCTC	2 cut(s)	689, 2137
BfaI	CTAG	4 cut(s)	615, 834, 1242, 1625
BfmI	CTRYAG	2 cut(s)	1284, 1533
BisI	GCNGC	6 cut(s)	44, 467, 483, 621, 708, 1139
BlsI	GCNGC	6 cut(s)	45, 468, 484, 622, 709, 1140
BmcAI	AGTACT	3 cut(s)	792, 913, 1828
Bme1390I	CCNGG	5 cut(s)	314, 523, 829, 1704, 2072
Bme18I	GGWCC	2 cut(s)	49, 1706
BmeT110I	CYCGRG	1 cut(s)	86
BmgT120I	GGNCC	6 cut(s)	49, 82, 316, 647, 648, 1706
BmiI	GGNNCC	2 cut(s)	649, 846
BmrFI	CCNGG	5 cut(s)	314, 523, 829, 1704, 2072
BmsI	GCATC	2 cut(s)	1450, 1855
BpiI	GAAGAC	1 cut(s)	350
BpmI	CTGGAG	2 cut(s)	1512, 1878
BpuEI	CTTGAG	2 cut(s)	291, 2075
BpuMI	CCSGG	2 cut(s)	523, 1704
BsaBI	GATNNNNATC	1 cut(s)	843
BsaHI	GRCGYC	2 cut(s)	105, 132
BsaI	GGTCTC	1 cut(s)	689
BsaJI	CCNNGG	5 cut(s)	78, 312, 1815, 2019, 2046
BsaWI	WCCGGW	1 cut(s)	1831
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 194, 224
Bsc4I	CCNNNNNNNGG	3 cut(s)	46, 492, 977
Bse1I	ACTGG	9 cut(s)	268, 379, 855, 909, 1206, 1276, 1366, 1495, 1881
Bse21I	CCTNAGG	1 cut(s)	1599
Bse3DI	GCAATG	1 cut(s)	674
Bse8I	GATNNNNATC	1 cut(s)	843
BseAI	TCCGGA	1 cut(s)	1831
BseBI	CCWGG	3 cut(s)	314, 829, 2072
BseDI	CCNNGG	5 cut(s)	78, 312, 1815, 2019, 2046
BseGI	GGATG	5 cut(s)	159, 1050, 1771, 1846, 1978
BseJI	GATNNNNATC	1 cut(s)	843
BseLI	CCNNNNNNNGG	3 cut(s)	46, 492, 977
BseMI	GCAATG	1 cut(s)	674
BseMII	CTCAG	4 cut(s)	339, 1055, 1178, 1613
BseNI	ACTGG	9 cut(s)	268, 379, 855, 909, 1206, 1276, 1366, 1495, 1881
BseRI	GAGGAG	4 cut(s)	176, 202, 227, 1733
BseSI	GKGCMC	1 cut(s)	651
BseXI	GCAGC	5 cut(s)	469, 478, 607, 719, 1150
BseYI	CCCAGC	1 cut(s)	1065
Bsh1236I	CGCG	5 cut(s)	63, 147, 231, 252, 277
Bsh1285I	CGRYCG	2 cut(s)	145, 151
BshFI	GGCC	4 cut(s)	83, 317, 398, 649
BsiEI	CGRYCG	2 cut(s)	145, 151
BsiHKAI	GWGCWC	1 cut(s)	93
BsiHKCI	CYCGRG	1 cut(s)	86
BsiSI	CCGG	5 cut(s)	47, 102, 522, 1704, 1832
BsiWI	CGTACG	2 cut(s)	119, 1229
BslFI	GGGAC	2 cut(s)	230, 1966
BslI	CCNNNNNNNGG	3 cut(s)	46, 492, 977
BsmAI	GTCTC	2 cut(s)	689, 2137
BsmFI	GGGAC	2 cut(s)	230, 1966
BsnI	GGCC	4 cut(s)	83, 317, 398, 649
Bso31I	GGTCTC	1 cut(s)	689
BsoBI	CYCGRG	1 cut(s)	86
Bsp120I	GGGCCC	1 cut(s)	647
Bsp1286I	GDGCHC	3 cut(s)	93, 651, 2128
Bsp13I	TCCGGA	1 cut(s)	1831
Bsp143I	GATC	8 cut(s)	123, 142, 391, 510, 844, 994, 1225, 1756
Bsp68I	TCGCGA	1 cut(s)	147
BspACI	CCGC	8 cut(s)	41, 44, 52, 61, 229, 265, 384, 493
BspANI	GGCC	4 cut(s)	83, 317, 398, 649
BspCNI	CTCAG	4 cut(s)	338, 1054, 1177, 1612
BspEI	TCCGGA	1 cut(s)	1831
BspFNI	CGCG	5 cut(s)	63, 147, 231, 252, 277
BspHI	TCATGA	1 cut(s)	1414
BspLI	GGNNCC	2 cut(s)	649, 846
BspPI	GGATC	2 cut(s)	839, 852
BspTNI	GGTCTC	1 cut(s)	689
BsrBI	CCGCTC	2 cut(s)	54, 493
BsrDI	GCAATG	1 cut(s)	674
BsrI	ACTGG	9 cut(s)	268, 379, 855, 909, 1206, 1276, 1366, 1495, 1881
BssECI	CCNNGG	5 cut(s)	78, 312, 1815, 2019, 2046
BssMI	GATC	8 cut(s)	123, 142, 391, 510, 844, 994, 1225, 1756
BssNI	GRCGYC	2 cut(s)	105, 132
BssSI	CACGAG	1 cut(s)	71
BssT1I	CCWWGG	4 cut(s)	78, 1815, 2019, 2046
Bst2BI	CACGAG	1 cut(s)	71
Bst2UI	CCWGG	3 cut(s)	314, 829, 2072
Bst4CI	ACNGT	6 cut(s)	119, 152, 286, 931, 1405, 1694
Bst6I	CTCTTC	1 cut(s)	1556
BstACI	GRCGYC	2 cut(s)	105, 132
BstC8I	GCNNGC	1 cut(s)	968
BstDEI	CTNAG	5 cut(s)	325, 570, 1041, 1164, 1599
BstF5I	GGATG	5 cut(s)	159, 1050, 1771, 1846, 1978
BstFNI	CGCG	5 cut(s)	63, 147, 231, 252, 277
BstHHI	GCGC	4 cut(s)	65, 254, 279, 293
BstKTI	GATC	8 cut(s)	126, 145, 394, 513, 847, 997, 1228, 1759
BstMAI	GTCTC	2 cut(s)	689, 2137
BstMBI	GATC	8 cut(s)	123, 142, 391, 510, 844, 994, 1225, 1756
BstMCI	CGRYCG	2 cut(s)	145, 151
BstMWI	GCNNNNNNNGC	7 cut(s)	60, 102, 153, 629, 707, 1075, 2101
BstNI	CCWGG	3 cut(s)	314, 829, 2072
BstSCI	CCNGG	5 cut(s)	312, 521, 827, 1702, 2070
BstSFI	CTRYAG	2 cut(s)	1284, 1533
BstSLI	GKGCMC	1 cut(s)	651
BstUI	CGCG	5 cut(s)	63, 147, 231, 252, 277
BstV1I	GCAGC	5 cut(s)	469, 478, 607, 719, 1150
BstV2I	GAAGAC	1 cut(s)	350
BstX2I	RGATCY	1 cut(s)	844
BstXI	CCANNNNNNTGG	1 cut(s)	1495
BstYI	RGATCY	1 cut(s)	844
Bsu36I	CCTNAGG	1 cut(s)	1599
BsuRI	GGCC	4 cut(s)	83, 317, 398, 649
BtsCI	GGATG	5 cut(s)	159, 1050, 1771, 1846, 1978
BtsI	GCAGTG	1 cut(s)	753
BtsIMutI	CAGTG	7 cut(s)	753, 862, 1213, 1359, 1427, 1488, 1699
BtuMI	TCGCGA	1 cut(s)	147
Cac8I	GCNNGC	1 cut(s)	968
CaiI	CAGNNNCTG	1 cut(s)	472
CciI	TCATGA	1 cut(s)	1414
CfoI	GCGC	4 cut(s)	65, 254, 279, 293
Cfr13I	GGNCC	6 cut(s)	49, 82, 316, 647, 648, 1706
CpoI	CGGWCCG	1 cut(s)	49
CseI	GACGC	2 cut(s)	94, 121
CsiI	ACCWGGT	1 cut(s)	2070
Csp6I	GTAC	8 cut(s)	120, 271, 791, 912, 1100, 1230, 1827, 1874
CspI	CGGWCCG	1 cut(s)	49
CviAII	CATG	6 cut(s)	136, 373, 1375, 1415, 1949, 1985
CviQI	GTAC	8 cut(s)	120, 271, 791, 912, 1100, 1230, 1827, 1874
DdeI	CTNAG	5 cut(s)	325, 570, 1041, 1164, 1599
DpnI	GATC	8 cut(s)	125, 144, 393, 512, 846, 996, 1227, 1758
DpnII	GATC	8 cut(s)	123, 142, 391, 510, 844, 994, 1225, 1756
DraI	TTTAAA	1 cut(s)	2119
DraIII	CACNNNGTG	1 cut(s)	2074
Eam1104I	CTCTTC	1 cut(s)	1556
EarI	CTCTTC	1 cut(s)	1556
EciI	GGCGGA	1 cut(s)	254
Ecl136II	GAGCTC	1 cut(s)	91
Eco130I	CCWWGG	4 cut(s)	78, 1815, 2019, 2046
Eco147I	AGGCCT	1 cut(s)	398
Eco24I	GRGCYC	3 cut(s)	93, 651, 2128
Eco31I	GGTCTC	1 cut(s)	689
Eco47I	GGWCC	2 cut(s)	49, 1706
Eco53kI	GAGCTC	1 cut(s)	91
Eco57I	CTGAAG	2 cut(s)	1451, 1683
Eco81I	CCTNAGG	1 cut(s)	1599
Eco88I	CYCGRG	1 cut(s)	86
EcoICRI	GAGCTC	1 cut(s)	91
EcoO109I	RGGNCCY	4 cut(s)	82, 316, 647, 648
EcoRI	GAATTC	1 cut(s)	1378
EcoRII	CCWGG	3 cut(s)	312, 827, 2070
EcoT14I	CCWWGG	4 cut(s)	78, 1815, 2019, 2046
EcoT38I	GRGCYC	3 cut(s)	93, 651, 2128
ErhI	CCWWGG	4 cut(s)	78, 1815, 2019, 2046
FaeI	CATG	6 cut(s)	139, 376, 1378, 1418, 1952, 1988
FaqI	GGGAC	2 cut(s)	230, 1966
FatI	CATG	6 cut(s)	135, 372, 1374, 1414, 1948, 1984
FauI	CCCGC	2 cut(s)	48, 68
Fnu4HI	GCNGC	6 cut(s)	44, 467, 483, 621, 708, 1139
FokI	GGATG	5 cut(s)	146, 1037, 1778, 1853, 1985
FriOI	GRGCYC	3 cut(s)	93, 651, 2128
Fsp4HI	GCNGC	6 cut(s)	44, 467, 483, 621, 708, 1139
FspBI	CTAG	4 cut(s)	615, 834, 1242, 1625
GlaI	GCGC	4 cut(s)	64, 253, 278, 292
GluI	GCNGC	6 cut(s)	44, 467, 483, 621, 708, 1139
GsaI	CCCAGC	1 cut(s)	1069
GsuI	CTGGAG	2 cut(s)	1512, 1878
HaeIII	GGCC	4 cut(s)	83, 317, 398, 649
HapII	CCGG	5 cut(s)	47, 102, 522, 1704, 1832
HgaI	GACGC	2 cut(s)	94, 121
HhaI	GCGC	4 cut(s)	65, 254, 279, 293
Hin1I	GRCGYC	2 cut(s)	105, 132
Hin1II	CATG	6 cut(s)	139, 376, 1378, 1418, 1952, 1988
Hin6I	GCGC	4 cut(s)	63, 252, 277, 291
HinP1I	GCGC	4 cut(s)	63, 252, 277, 291
HindIII	AAGCTT	1 cut(s)	894
HpaII	CCGG	5 cut(s)	47, 102, 522, 1704, 1832
HphI	GGTGA	8 cut(s)	199, 274, 878, 1754, 1975, 2012, 2060, 2086
Hpy166II	GTNNAC	2 cut(s)	273, 991
Hpy188I	TCNGA	7 cut(s)	142, 442, 1044, 1167, 1663, 2032, 2130
Hpy8I	GTNNAC	2 cut(s)	273, 991
Hpy99I	CGWCG	2 cut(s)	110, 221
HpyAV	CCTTC	6 cut(s)	176, 189, 232, 591, 857, 1137
HpyCH4III	ACNGT	6 cut(s)	119, 152, 286, 931, 1405, 1694
HpyCH4IV	ACGT	1 cut(s)	1770
HpyF10VI	GCNNNNNNNGC	7 cut(s)	60, 102, 153, 629, 707, 1075, 2101
HpyF3I	CTNAG	5 cut(s)	325, 570, 1041, 1164, 1599
HpySE526I	ACGT	1 cut(s)	1770
Hsp92I	GRCGYC	2 cut(s)	105, 132
Hsp92II	CATG	6 cut(s)	139, 376, 1378, 1418, 1952, 1988
HspAI	GCGC	4 cut(s)	63, 252, 277, 291
Kpn2I	TCCGGA	1 cut(s)	1831
Kzo9I	GATC	8 cut(s)	123, 142, 391, 510, 844, 994, 1225, 1756
LmnI	GCTCC	4 cut(s)	161, 1066, 1135, 1483
Lsp1109I	GCAGC	5 cut(s)	469, 478, 607, 719, 1150
LweI	GCATC	2 cut(s)	1450, 1855
MabI	ACCWGGT	1 cut(s)	2070
MaeI	CTAG	4 cut(s)	615, 834, 1242, 1625
MaeII	ACGT	1 cut(s)	1770
MaeIII	GTNAC	5 cut(s)	73, 573, 1023, 1201, 1438
MalI	GATC	8 cut(s)	125, 144, 393, 512, 846, 996, 1227, 1758
MbiI	CCGCTC	2 cut(s)	54, 493
MboI	GATC	8 cut(s)	123, 142, 391, 510, 844, 994, 1225, 1756
MboII	GAAGA	4 cut(s)	355, 1235, 1469, 1573
MfeI	CAATTG	1 cut(s)	1218
MflI	RGATCY	1 cut(s)	844
MhlI	GDGCHC	3 cut(s)	93, 651, 2128
MlyI	GAGTC	2 cut(s)	598, 724
MmeI	TCCRAC	2 cut(s)	390, 1113
MroI	TCCGGA	1 cut(s)	1831
MseI	TTAA	4 cut(s)	477, 668, 1610, 2118
MslI	CAYNNNNRTG	1 cut(s)	1493
MspA1I	CMGCKG	1 cut(s)	1385
MspI	CCGG	5 cut(s)	47, 102, 522, 1704, 1832
MspR9I	CCNGG	5 cut(s)	314, 523, 829, 1704, 2072
MunI	CAATTG	1 cut(s)	1218
MvaI	CCWGG	3 cut(s)	314, 829, 2072
MvnI	CGCG	5 cut(s)	63, 147, 231, 252, 277
MwoI	GCNNNNNNNGC	7 cut(s)	60, 102, 153, 629, 707, 1075, 2101
NciI	CCSGG	2 cut(s)	523, 1704
NdeII	GATC	8 cut(s)	123, 142, 391, 510, 844, 994, 1225, 1756
NlaIII	CATG	6 cut(s)	139, 376, 1378, 1418, 1952, 1988
NlaIV	GGNNCC	2 cut(s)	649, 846
NmeAIII	GCCGAG	1 cut(s)	72
NmuCI	GTSAC	3 cut(s)	73, 1023, 1438
NruI	TCGCGA	1 cut(s)	147
OliI	CACNNNNGTG	1 cut(s)	1493
PaeR7I	CTCGAG	1 cut(s)	86
PagI	TCATGA	1 cut(s)	1414
PceI	AGGCCT	1 cut(s)	398
PfeI	GAWTC	8 cut(s)	1304, 1388, 1507, 1658, 1808, 1853, 1901, 2033
Pfl23II	CGTACG	2 cut(s)	119, 1229
PflMI	CCANNNNNTGG	1 cut(s)	977
PkrI	GCNGC	6 cut(s)	45, 468, 484, 622, 709, 1140
Ple19I	CGATCG	1 cut(s)	145
PleI	GAGTC	2 cut(s)	597, 724
PpsI	GAGTC	2 cut(s)	597, 724
PsiI	TTATAA	2 cut(s)	560, 1118
Psp124BI	GAGCTC	1 cut(s)	93
Psp6I	CCWGG	3 cut(s)	312, 827, 2070
PspFI	CCCAGC	1 cut(s)	1065
PspGI	CCWGG	3 cut(s)	312, 827, 2070
PspLI	CGTACG	2 cut(s)	119, 1229
PspN4I	GGNNCC	2 cut(s)	649, 846
PspOMI	GGGCCC	1 cut(s)	647
PspPI	GGNCC	6 cut(s)	49, 82, 316, 647, 648, 1706
PspXI	VCTCGAGB	1 cut(s)	86
PstNI	CAGNNNCTG	1 cut(s)	472
PsuI	RGATCY	1 cut(s)	844
PvuI	CGATCG	1 cut(s)	145
PvuII	CAGCTG	1 cut(s)	1385
RruI	TCGCGA	1 cut(s)	147
RsaI	GTAC	8 cut(s)	121, 272, 792, 913, 1101, 1231, 1828, 1875
RsaNI	GTAC	8 cut(s)	120, 271, 791, 912, 1100, 1230, 1827, 1874
RseI	CAYNNNNRTG	1 cut(s)	1493
Rsr2I	CGGWCCG	1 cut(s)	49
RsrII	CGGWCCG	1 cut(s)	49
SacI	GAGCTC	1 cut(s)	93
SaqAI	TTAA	4 cut(s)	477, 668, 1610, 2118
SatI	GCNGC	6 cut(s)	44, 467, 483, 621, 708, 1139
Sau3AI	GATC	8 cut(s)	123, 142, 391, 510, 844, 994, 1225, 1756
Sau96I	GGNCC	6 cut(s)	49, 82, 316, 647, 648, 1706
ScaI	AGTACT	3 cut(s)	792, 913, 1828
SchI	GAGTC	2 cut(s)	598, 724
ScrFI	CCNGG	5 cut(s)	314, 523, 829, 1704, 2072
SduI	GDGCHC	3 cut(s)	93, 651, 2128
SexAI	ACCWGGT	1 cut(s)	2070
SfaNI	GCATC	2 cut(s)	1450, 1855
SfcI	CTRYAG	2 cut(s)	1284, 1533
Sfr274I	CTCGAG	1 cut(s)	86
SinI	GGWCC	2 cut(s)	49, 1706
SlaI	CTCGAG	1 cut(s)	86
SmiMI	CAYNNNNRTG	1 cut(s)	1493
SmlI	CTYRAG	3 cut(s)	86, 306, 2090
SmoI	CTYRAG	3 cut(s)	86, 306, 2090
SseBI	AGGCCT	1 cut(s)	398
SsiI	CCGC	8 cut(s)	41, 44, 52, 61, 229, 265, 384, 493
SspI	AATATT	1 cut(s)	1258
SspMI	CTAG	4 cut(s)	615, 834, 1242, 1625
SstI	GAGCTC	1 cut(s)	93
StuI	AGGCCT	1 cut(s)	398
StyD4I	CCNGG	5 cut(s)	312, 521, 827, 1702, 2070
StyI	CCWWGG	4 cut(s)	78, 1815, 2019, 2046
TaaI	ACNGT	6 cut(s)	119, 152, 286, 931, 1405, 1694
TaiI	ACGT	1 cut(s)	1773
TaqI	TCGA	5 cut(s)	12, 87, 390, 457, 592
TatI	WGTACW	6 cut(s)	270, 790, 911, 1099, 1826, 1873
TauI	GCSGC	1 cut(s)	46
TfiI	GAWTC	8 cut(s)	1304, 1388, 1507, 1658, 1808, 1853, 1901, 2033
Tru1I	TTAA	4 cut(s)	477, 668, 1610, 2118
Tru9I	TTAA	4 cut(s)	477, 668, 1610, 2118
TscAI	CASTG	7 cut(s)	753, 862, 1213, 1366, 1434, 1495, 1699
TseFI	GTSAC	3 cut(s)	73, 1023, 1438
TseI	GCWGC	5 cut(s)	466, 482, 620, 707, 1138
Tsp45I	GTSAC	3 cut(s)	73, 1023, 1438
TspDTI	ATGAA	6 cut(s)	389, 651, 1167, 1281, 1391, 1857
TspGWI	ACGGA	1 cut(s)	205
TspRI	CASTG	7 cut(s)	753, 862, 1213, 1366, 1434, 1495, 1699
Van91I	CCANNNNNTGG	1 cut(s)	977
VpaK11BI	GGWCC	2 cut(s)	49, 1706
XapI	RAATTY	3 cut(s)	638, 1378, 1539
XhoI	CTCGAG	1 cut(s)	86
XspI	CTAG	4 cut(s)	615, 834, 1242, 1625
ZrmI	AGTACT	3 cut(s)	792, 913, 1828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.