Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002965

Physical Location & Seq

Genomic Coordinates Reverse (-)

67726290 .. 67729691

Gene Structure 3402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ33849

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGGGCTTCTTCGACCTGAGCGTACCCTACACCGACCTCCCGCCGCCGGACCGCTCAACCCGCGCAAAGCTCGTGACCAAGGCCCTCCAGCTCGGCTACTCCGGCGTCGCCTACAACCGTACGATCAAGGGCGTCATGTCCGATCGCGACCGTTGCTCCATCCCCCTCCTCACTCTCCCTTCTCTCCTCAAACACTCTCCTCACCTCACCTCCTCCGTCGGCTTCCACCGCGACCTCCTCGGCGTCCCACGCTCCACCCCTTTCCGCCAGTACACGCGCCTCACCGTCTGCGCCGAAACCCCTGCCCAGGCTCAGACCCTCAATTCCGGCAACCCCATTTTGAAGACCTACGATTTGGTGGCTGTCAAGCCCATGAACCAGTCCGCTTTCGATCAGGCCTGTGAGAAATTGGAGGTAGATATAATTGCGATTGATTTTTCGGAGAAGTTACCATTTCGATTGAAGCAGCCTCTGGTTAAAGCTGCCATTGAGCGGAAGGTGTATTTTGAGATCACATATGCAGGGCTTATTGCCGATGTTCAAACTAGAAGGCAAATTATAACCAATGCTAAGTTATTGGTAGATTGGACTCGAGGAAGGAATATAATTATCTCTAGTGCTGCCCCAACTGCGAATGAATTTAGAGGGCCATATGATGTTGCAAACTTAATGTCATTGCTCGATCTCTCCATGGAACGAGCTAAGGCGGCTATTTCAAGAAATTGTAGGACTCTTATATCTAATGCAGTGAGAAAAAAACACTATTATAAGGAAGCCATTAGAGTTGAAGTACTACCATCAGGTCAAGAAAGTGATGGGAACAAACCTTCGTCTAGTGACTCTTTTAATTGGGATCCCATCTCTAGTGGTGAAGGTGATTTGCTTTTAGATGATTTGGCAAAGGCTTTCAGTAACTCCAGTACTAAAGCAACCAAAACGGTCAAAGCCATTGATTTTGCTTCAGTTATTGACAGCATGCCATCACTTGGATTTCAAGTTAACGATCTTATATCTGGAACTAATGTGGTTGTGTCACAACCATTGGCTACTCAGAAAAACATCGTTTCTGCTCCCCAGTTAAATGTGCAATCAGTTGCAACTGATGGAGTACAAGAACAATCTGTTTTATGTGATACTATGTTGGAGTGGCAAAGGTTCAGAAGCAAAAATCCTCAGAAATTATATTCATCTAGTGATACTACTAAAGCTGTTAACAATGTTATTCCAATTGAAGATCCTTTGATAACCACTAGAGCAGAACCAAATAGTCCAGATGAAACAGATGGGATTGCCACAGATATTCATGATGTGCAATCACAGAAGTCTGCGATTGCAAATGCTGTTAATGATGTTATGGAAATTGAAGTTCCTACAACCACTGGAGCAGAACCAATGAATTCAGCTGAATCAATGGGGATTACAAAAGAAATTCATGATGTGCAATCACTGAAGTCTGTGACTGCCAAAACTTTTAAAGATGCTATGGAAATTGAAGCTCCTACGACCACTGGAGCGGAAACAAAGAATCCGGATGGAATAGATGGGGTTACTACAGAAATTCTTAATGTTCGATCACAGAAGAGTATGACTAATTGCAAATTGAATGTTGTGCCATCTCAGGTTAATTTAACATATCATGCACTAGACATTGGGTTGAGTGTTGCTTGTAATCCTGAATCAGGAGTTCAAGTTCCCACTAATTATCAGGACAGTGATATTCCCGGTCGTCATAATGAAGAGGCTGATAGTATTAAAAATAATGATATACAAAGTGATTTAGTGGATGAAGTTCTAACAGGTAAAGAAAAAAATTTTTTGCCTCTGGATTCAGCATTGGATAAAAGTATTTCGGAAGTGGATGAATTGACGGAACCTGGAGATGATGTAGTTGTACTTGCAAATCAGGTTCCTGTTCTGGATTCTAGTGATGAGATGACAGCAACTGATGATTATTCAGTTGCAAATCATGAGACAGCAGAGGTAATAATGGATGAGCAAGAACATGGGAAAGCTGACATTGAATTGAGCTATCCAGCCTTGGTTCAGTCTGAATCAGGGAAATCCAAGGCAAAAAGGAAGAAACCTCATCAGGTGACATTTCTTCCTCTCAAGCGATTGCTGCATGCTACACCTTTTAAGAAGGCTCGGAAAAGTAAAAGGAGACATAAGATGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0099116 GO:1901360 GO:1901363 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

CCT RNase_P_p30

Protein Analysis

725

Amino Acids

79.47

Weight (kDa)

5.5

Isoelectric Point (pI)

44.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_P_p30	PF01876	5 - 241	5.1e-51	RNase P subunit p30

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59980 AT5G59980 AT5G59980 AT5G59980
fragaria_vesca	FvH4_3g34550 FvH4_3g34550
malus_domestica	MD11G1117900.v1.1
prunus_persica	Prupe.6G088000_v2.0.a1 Prupe.6G088000_v2.0.a1
pyrus_communis	pycom03g08460 pycom11g09880
rosa_chinensis	RchiOBHm_Chr4g0385531 RchiOBHm_Chr5g0062191
rosa_laevigata	RLG00000010219 RLG00000035541
rosa_multiflora	Rmu_co8004892.1_g000001 Rmu_sc0014282.1_g000010 Rmu_sc0018073.1_g000001 Rmu_ssc0000409.1_g000011
rosa_roxburghii	Rroxscaffold_1G00018520 Rroxscaffold_5G00333410
rosa_rugosa	Rorug05G0347200 Rorug07G0171200 Rorug07G0171200 Rorug07G0171300
rosa_samantha	Rh4AG006400 Rh4DG005200 Rh5AG407700 Rh5BG421400 Rh5CG445400 Rh5DG436400 Rh7AG313200 Rh7BG303900 Rh7CG331600 Rh7DG312000
rosa_wichuraiana	Rw5G038420 Rw7G026520 Rw7G028230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	560, 768
AccB7I	CCANNNNNTGG	1 cut(s)	986
AccBSI	CCGCTC	3 cut(s)	54, 493, 1514
AccII	CGCG	4 cut(s)	63, 147, 231, 277
AccIII	TCCGGA	1 cut(s)	1528
AclWI	GGATC	3 cut(s)	848, 861, 1229
AcsI	RAATTY	5 cut(s)	638, 1396, 1428, 1557, 1810
AcuI	CTGAAG	2 cut(s)	945, 1469
AcyI	GRCGYC	3 cut(s)	105, 132, 243
AfaI	GTAC	7 cut(s)	24, 121, 272, 792, 922, 1110, 1893
AfiI	CCNNNNNNNGG	5 cut(s)	46, 307, 492, 986, 1679
AjnI	CCWGG	2 cut(s)	306, 1873
AloI	GAACNNNNNNTCC	2 cut(s)	1674, 1706
AluBI	AGCT	9 cut(s)	70, 91, 482, 701, 1208, 1403, 1496, 2012, 2028
AluI	AGCT	9 cut(s)	70, 91, 482, 701, 1208, 1403, 1496, 2012, 2028
Alw26I	GTCTC	2 cut(s)	1964, 2155
AlwI	GGATC	3 cut(s)	848, 861, 1229
AlwNI	CAGNNNCTG	2 cut(s)	472, 1943
Ama87I	CYCGRG	1 cut(s)	591
Aor13HI	TCCGGA	1 cut(s)	1528
AoxI	GGCC	3 cut(s)	81, 396, 647
ApeKI	GCWGC	4 cut(s)	466, 482, 620, 2119
ApoI	RAATTY	5 cut(s)	638, 1396, 1428, 1557, 1810
ArsI	GACNNNNNNTTYG	4 cut(s)	337, 369, 656, 688
AspLEI	GCGC	3 cut(s)	65, 279, 293
AspS9I	GGNCC	3 cut(s)	49, 82, 647
AsuC2I	CCSGG	1 cut(s)	1722
AsuHPI	GGTGA	6 cut(s)	194, 199, 274, 881, 887, 2104
AvaI	CYCGRG	1 cut(s)	591
AvaII	GGWCC	1 cut(s)	49
BamHI	GGATCC	1 cut(s)	853
BauI	CACGAG	1 cut(s)	71
BbsI	GAAGAC	1 cut(s)	350
BbvI	GCAGC	4 cut(s)	469, 478, 607, 2106
BcgI	CGANNNNNNTGC	2 cut(s)	284, 318
BciT130I	CCWGG	2 cut(s)	308, 1875
BcnI	CCSGG	1 cut(s)	1722
BcoDI	GTCTC	2 cut(s)	1964, 2155
BfaI	CTAG	8 cut(s)	546, 615, 834, 864, 1191, 1251, 1643, 1923
BfmI	CTRYAG	1 cut(s)	1551
BisI	GCNGC	6 cut(s)	44, 467, 483, 621, 708, 2120
BlsI	GCNGC	6 cut(s)	45, 468, 484, 622, 709, 2121
BmcAI	AGTACT	2 cut(s)	792, 922
Bme1390I	CCNGG	3 cut(s)	308, 1722, 1875
Bme18I	GGWCC	1 cut(s)	49
BmeT110I	CYCGRG	1 cut(s)	591
BmgT120I	GGNCC	3 cut(s)	49, 82, 647
BmiI	GGNNCC	3 cut(s)	855, 1872, 1908
BmrFI	CCNGG	3 cut(s)	308, 1722, 1875
BmrI	ACTGGG	1 cut(s)	1069
BmsI	GCATC	1 cut(s)	1468
BmuI	ACTGGG	1 cut(s)	1069
BpiI	GAAGAC	1 cut(s)	350
BpmI	CTGGAG	5 cut(s)	71, 901, 1401, 1530, 1896
Bpu10I	CCTNAGC	2 cut(s)	17, 702
BpuEI	CTTGAG	1 cut(s)	2093
BpuMI	CCSGG	1 cut(s)	1722
BsaHI	GRCGYC	3 cut(s)	105, 132, 243
BsaJI	CCNNGG	6 cut(s)	78, 238, 306, 690, 2037, 2064
BsaWI	WCCGGW	1 cut(s)	1528
BsaXI	ACNNNNNCTCC	8 cut(s)	140, 170, 194, 224, 1674, 1704, 1869, 1899
Bsc4I	CCNNNNNNNGG	5 cut(s)	46, 307, 492, 986, 1679
Bse1I	ACTGG	6 cut(s)	268, 379, 918, 1075, 1384, 1513
Bse3DI	GCAATG	1 cut(s)	674
BseAI	TCCGGA	1 cut(s)	1528
BseBI	CCWGG	2 cut(s)	308, 1875
BseDI	CCNNGG	6 cut(s)	78, 238, 306, 690, 2037, 2064
BseGI	GGATG	5 cut(s)	159, 1537, 1789, 1864, 1996
BseLI	CCNNNNNNNGG	5 cut(s)	46, 307, 492, 986, 1679
BseMI	GCAATG	1 cut(s)	674
BseMII	CTCAG	5 cut(s)	8, 326, 1064, 1187, 1631
BseNI	ACTGG	6 cut(s)	268, 379, 918, 1075, 1384, 1513
BseRI	GAGGAG	5 cut(s)	158, 176, 189, 202, 227
BseXI	GCAGC	4 cut(s)	469, 478, 607, 2106
Bsh1236I	CGCG	4 cut(s)	63, 147, 231, 277
Bsh1285I	CGRYCG	3 cut(s)	145, 151, 1726
BshFI	GGCC	3 cut(s)	83, 398, 649
BsiEI	CGRYCG	3 cut(s)	145, 151, 1726
BsiHKCI	CYCGRG	1 cut(s)	591
BsiSI	CCGG	5 cut(s)	47, 102, 327, 1529, 1722
BsiWI	CGTACG	1 cut(s)	119
BslFI	GGGAC	1 cut(s)	230
BslI	CCNNNNNNNGG	5 cut(s)	46, 307, 492, 986, 1679
BsmAI	GTCTC	2 cut(s)	1964, 2155
BsmFI	GGGAC	1 cut(s)	230
BsnI	GGCC	3 cut(s)	83, 398, 649
BsoBI	CYCGRG	1 cut(s)	591
Bsp13I	TCCGGA	1 cut(s)	1528
Bsp143I	GATC	9 cut(s)	123, 142, 391, 510, 682, 853, 1003, 1234, 1571
Bsp19I	CCATGG	1 cut(s)	690
Bsp68I	TCGCGA	1 cut(s)	147
BspANI	GGCC	3 cut(s)	83, 398, 649
BspCNI	CTCAG	5 cut(s)	9, 325, 1063, 1186, 1630
BspEI	TCCGGA	1 cut(s)	1528
BspFNI	CGCG	4 cut(s)	63, 147, 231, 277
BspHI	TCATGA	3 cut(s)	1303, 1432, 1966
BspLI	GGNNCC	3 cut(s)	855, 1872, 1908
BspPI	GGATC	3 cut(s)	848, 861, 1229
BsrBI	CCGCTC	3 cut(s)	54, 493, 1514
BsrDI	GCAATG	1 cut(s)	674
BsrI	ACTGG	6 cut(s)	268, 379, 918, 1075, 1384, 1513
BssECI	CCNNGG	6 cut(s)	78, 238, 306, 690, 2037, 2064
BssMI	GATC	9 cut(s)	123, 142, 391, 510, 682, 853, 1003, 1234, 1571
BssNI	GRCGYC	3 cut(s)	105, 132, 243
BssSI	CACGAG	1 cut(s)	71
BssT1I	CCWWGG	4 cut(s)	78, 690, 2037, 2064
Bst2BI	CACGAG	1 cut(s)	71
Bst2UI	CCWGG	2 cut(s)	308, 1875
Bst4CI	ACNGT	5 cut(s)	119, 152, 286, 940, 1712
Bst6I	CTCTTC	2 cut(s)	1574, 1731
BstACI	GRCGYC	3 cut(s)	105, 132, 243
BstC8I	GCNNGC	2 cut(s)	977, 2124
BstDEI	CTNAG	7 cut(s)	17, 312, 570, 702, 1050, 1173, 1617
BstDSI	CCRYGG	1 cut(s)	690
BstENI	CCTNNNNNAGG	1 cut(s)	1677
BstF5I	GGATG	5 cut(s)	159, 1537, 1789, 1864, 1996
BstFNI	CGCG	4 cut(s)	63, 147, 231, 277
BstHHI	GCGC	3 cut(s)	65, 279, 293
BstKTI	GATC	9 cut(s)	126, 145, 394, 513, 685, 856, 1006, 1237, 1574
BstMAI	GTCTC	2 cut(s)	1964, 2155
BstMBI	GATC	9 cut(s)	123, 142, 391, 510, 682, 853, 1003, 1234, 1571
BstMCI	CGRYCG	3 cut(s)	145, 151, 1726
BstMWI	GCNNNNNNNGC	8 cut(s)	60, 102, 153, 228, 249, 629, 707, 2119
BstNI	CCWGG	2 cut(s)	308, 1875
BstNSI	RCATGY	2 cut(s)	979, 2126
BstSCI	CCNGG	3 cut(s)	306, 1720, 1873
BstSFI	CTRYAG	1 cut(s)	1551
BstUI	CGCG	4 cut(s)	63, 147, 231, 277
BstV1I	GCAGC	4 cut(s)	469, 478, 607, 2106
BstV2I	GAAGAC	1 cut(s)	350
BstX2I	RGATCY	2 cut(s)	853, 1234
BstYI	RGATCY	2 cut(s)	853, 1234
BsuRI	GGCC	3 cut(s)	83, 398, 649
BtgI	CCRYGG	1 cut(s)	690
BtsCI	GGATG	5 cut(s)	159, 1537, 1789, 1864, 1996
BtsI	GCAGTG	1 cut(s)	753
BtsIMutI	CAGTG	5 cut(s)	753, 1377, 1445, 1506, 1717
BtuMI	TCGCGA	1 cut(s)	147
Cac8I	GCNNGC	2 cut(s)	977, 2124
CaiI	CAGNNNCTG	2 cut(s)	472, 1943
CciI	TCATGA	3 cut(s)	1303, 1432, 1966
CfoI	GCGC	3 cut(s)	65, 279, 293
Cfr13I	GGNCC	3 cut(s)	49, 82, 647
CpoI	CGGWCCG	1 cut(s)	49
CseI	GACGC	3 cut(s)	94, 121, 232
Csp6I	GTAC	7 cut(s)	23, 120, 271, 791, 921, 1109, 1892
CspI	CGGWCCG	1 cut(s)	49
CviQI	GTAC	7 cut(s)	23, 120, 271, 791, 921, 1109, 1892
DdeI	CTNAG	7 cut(s)	17, 312, 570, 702, 1050, 1173, 1617
DpnI	GATC	9 cut(s)	125, 144, 393, 512, 684, 855, 1005, 1236, 1573
DpnII	GATC	9 cut(s)	123, 142, 391, 510, 682, 853, 1003, 1234, 1571
DraI	TTTAAA	1 cut(s)	1474
Eam1104I	CTCTTC	2 cut(s)	1574, 1731
EarI	CTCTTC	2 cut(s)	1574, 1731
EciI	GGCGGA	1 cut(s)	254
Eco130I	CCWWGG	4 cut(s)	78, 690, 2037, 2064
Eco147I	AGGCCT	1 cut(s)	398
Eco47I	GGWCC	1 cut(s)	49
Eco57I	CTGAAG	2 cut(s)	945, 1469
Eco88I	CYCGRG	1 cut(s)	591
EcoNI	CCTNNNNNAGG	1 cut(s)	1677
EcoO109I	RGGNCCY	1 cut(s)	82
EcoRI	GAATTC	1 cut(s)	1396
EcoRII	CCWGG	2 cut(s)	306, 1873
EcoT14I	CCWWGG	4 cut(s)	78, 690, 2037, 2064
ErhI	CCWWGG	4 cut(s)	78, 690, 2037, 2064
FaqI	GGGAC	1 cut(s)	230
FauI	CCCGC	2 cut(s)	48, 68
FauNDI	CATATG	2 cut(s)	517, 652
Fnu4HI	GCNGC	6 cut(s)	44, 467, 483, 621, 708, 2120
FokI	GGATG	5 cut(s)	146, 1544, 1796, 1871, 2003
Fsp4HI	GCNGC	6 cut(s)	44, 467, 483, 621, 708, 2120
FspBI	CTAG	8 cut(s)	546, 615, 834, 864, 1191, 1251, 1643, 1923
GlaI	GCGC	3 cut(s)	64, 278, 292
GluI	GCNGC	6 cut(s)	44, 467, 483, 621, 708, 2120
GsuI	CTGGAG	5 cut(s)	71, 901, 1401, 1530, 1896
HaeIII	GGCC	3 cut(s)	83, 398, 649
HapII	CCGG	5 cut(s)	47, 102, 327, 1529, 1722
HgaI	GACGC	3 cut(s)	94, 121, 232
HhaI	GCGC	3 cut(s)	65, 279, 293
Hin1I	GRCGYC	3 cut(s)	105, 132, 243
Hin6I	GCGC	3 cut(s)	63, 277, 291
HinP1I	GCGC	3 cut(s)	63, 277, 291
HincII	GTYRAC	2 cut(s)	1000, 1213
HindII	GTYRAC	2 cut(s)	1000, 1213
HinfI	GANTC	9 cut(s)	589, 730, 839, 1406, 1525, 1676, 1826, 1919, 2051
HpaI	GTTAAC	2 cut(s)	1000, 1213
HpaII	CCGG	5 cut(s)	47, 102, 327, 1529, 1722
HphI	GGTGA	6 cut(s)	194, 199, 274, 881, 887, 2104
Hpy166II	GTNNAC	3 cut(s)	273, 1000, 1213
Hpy188I	TCNGA	9 cut(s)	142, 315, 442, 1053, 1160, 1176, 1852, 2050, 2148
Hpy8I	GTNNAC	3 cut(s)	273, 1000, 1213
Hpy99I	CGWCG	2 cut(s)	110, 221
HpyAV	CCTTC	7 cut(s)	189, 490, 543, 591, 837, 866, 2134
HpyCH4III	ACNGT	5 cut(s)	119, 152, 286, 940, 1712
HpyF10VI	GCNNNNNNNGC	8 cut(s)	60, 102, 153, 228, 249, 629, 707, 2119
HpyF3I	CTNAG	7 cut(s)	17, 312, 570, 702, 1050, 1173, 1617
Hsp92I	GRCGYC	3 cut(s)	105, 132, 243
HspAI	GCGC	3 cut(s)	63, 277, 291
Kpn2I	TCCGGA	1 cut(s)	1528
KspAI	GTTAAC	2 cut(s)	1000, 1213
Kzo9I	GATC	9 cut(s)	123, 142, 391, 510, 682, 853, 1003, 1234, 1571
LmnI	GCTCC	6 cut(s)	161, 257, 1075, 1382, 1501, 1511
Lsp1109I	GCAGC	4 cut(s)	469, 478, 607, 2106
LweI	GCATC	1 cut(s)	1468
MaeI	CTAG	8 cut(s)	546, 615, 834, 864, 1191, 1251, 1643, 1923
MaeIII	GTNAC	8 cut(s)	73, 447, 836, 911, 1032, 1456, 1546, 2092
MalI	GATC	9 cut(s)	125, 144, 393, 512, 684, 855, 1005, 1236, 1573
MbiI	CCGCTC	3 cut(s)	54, 493, 1514
MboI	GATC	9 cut(s)	123, 142, 391, 510, 682, 853, 1003, 1234, 1571
MboII	GAAGA	6 cut(s)	355, 1244, 1591, 1748, 2089, 2093
MfeI	CAATTG	1 cut(s)	1227
MflI	RGATCY	2 cut(s)	853, 1234
MlyI	GAGTC	3 cut(s)	583, 724, 833
MmeI	TCCRAC	1 cut(s)	1122
MroI	TCCGGA	1 cut(s)	1528
MspA1I	CMGCKG	1 cut(s)	1403
MspI	CCGG	5 cut(s)	47, 102, 327, 1529, 1722
MspR9I	CCNGG	3 cut(s)	308, 1722, 1875
MunI	CAATTG	1 cut(s)	1227
MvaI	CCWGG	2 cut(s)	308, 1875
MvnI	CGCG	4 cut(s)	63, 147, 231, 277
MwoI	GCNNNNNNNGC	8 cut(s)	60, 102, 153, 228, 249, 629, 707, 2119
NciI	CCSGG	1 cut(s)	1722
NcoI	CCATGG	1 cut(s)	690
NdeI	CATATG	2 cut(s)	517, 652
NdeII	GATC	9 cut(s)	123, 142, 391, 510, 682, 853, 1003, 1234, 1571
NlaIV	GGNNCC	3 cut(s)	855, 1872, 1908
NmeAIII	GCCGAG	2 cut(s)	72, 219
NmuCI	GTSAC	5 cut(s)	73, 836, 1032, 1456, 2092
NruI	TCGCGA	1 cut(s)	147
NspI	RCATGY	2 cut(s)	979, 2126
PaeI	GCATGC	2 cut(s)	979, 2126
PaeR7I	CTCGAG	1 cut(s)	591
PagI	TCATGA	3 cut(s)	1303, 1432, 1966
PceI	AGGCCT	1 cut(s)	398
PcsI	WCGNNNNNNNCGW	1 cut(s)	18
PfeI	GAWTC	6 cut(s)	1406, 1525, 1676, 1826, 1919, 2051
Pfl23II	CGTACG	1 cut(s)	119
PflMI	CCANNNNNTGG	1 cut(s)	986
PkrI	GCNGC	6 cut(s)	45, 468, 484, 622, 709, 2121
Ple19I	CGATCG	1 cut(s)	145
PleI	GAGTC	3 cut(s)	583, 724, 833
PpsI	GAGTC	3 cut(s)	583, 724, 833
PsiI	TTATAA	2 cut(s)	560, 768
Psp6I	CCWGG	2 cut(s)	306, 1873
PspGI	CCWGG	2 cut(s)	306, 1873
PspLI	CGTACG	1 cut(s)	119
PspN4I	GGNNCC	3 cut(s)	855, 1872, 1908
PspPI	GGNCC	3 cut(s)	49, 82, 647
PspXI	VCTCGAGB	1 cut(s)	591
PstNI	CAGNNNCTG	2 cut(s)	472, 1943
PsuI	RGATCY	2 cut(s)	853, 1234
PvuI	CGATCG	1 cut(s)	145
PvuII	CAGCTG	1 cut(s)	1403
RruI	TCGCGA	1 cut(s)	147
RsaI	GTAC	7 cut(s)	24, 121, 272, 792, 922, 1110, 1893
RsaNI	GTAC	7 cut(s)	23, 120, 271, 791, 921, 1109, 1892
Rsr2I	CGGWCCG	1 cut(s)	49
RsrII	CGGWCCG	1 cut(s)	49
SatI	GCNGC	6 cut(s)	44, 467, 483, 621, 708, 2120
Sau3AI	GATC	9 cut(s)	123, 142, 391, 510, 682, 853, 1003, 1234, 1571
Sau96I	GGNCC	3 cut(s)	49, 82, 647
ScaI	AGTACT	2 cut(s)	792, 922
SchI	GAGTC	3 cut(s)	583, 724, 833
ScrFI	CCNGG	3 cut(s)	308, 1722, 1875
SfaNI	GCATC	1 cut(s)	1468
SfcI	CTRYAG	1 cut(s)	1551
Sfr274I	CTCGAG	1 cut(s)	591
SinI	GGWCC	1 cut(s)	49
SlaI	CTCGAG	1 cut(s)	591
SmlI	CTYRAG	2 cut(s)	591, 2108
SmoI	CTYRAG	2 cut(s)	591, 2108
SphI	GCATGC	2 cut(s)	979, 2126
SseBI	AGGCCT	1 cut(s)	398
SspMI	CTAG	8 cut(s)	546, 615, 834, 864, 1191, 1251, 1643, 1923
StuI	AGGCCT	1 cut(s)	398
StyD4I	CCNGG	3 cut(s)	306, 1720, 1873
StyI	CCWWGG	4 cut(s)	78, 690, 2037, 2064
TaaI	ACNGT	5 cut(s)	119, 152, 286, 940, 1712
TaqI	TCGA	6 cut(s)	12, 390, 457, 592, 681, 1570
TatI	WGTACW	5 cut(s)	270, 790, 920, 1108, 1891
TauI	GCSGC	2 cut(s)	46, 710
TfiI	GAWTC	6 cut(s)	1406, 1525, 1676, 1826, 1919, 2051
TscAI	CASTG	5 cut(s)	753, 1384, 1452, 1513, 1717
TseFI	GTSAC	5 cut(s)	73, 836, 1032, 1456, 2092
TseI	GCWGC	4 cut(s)	466, 482, 620, 2119
Tsp45I	GTSAC	5 cut(s)	73, 836, 1032, 1456, 2092
TspGWI	ACGGA	2 cut(s)	205, 1883
TspRI	CASTG	5 cut(s)	753, 1384, 1452, 1513, 1717
Van91I	CCANNNNNTGG	1 cut(s)	986
VpaK11BI	GGWCC	1 cut(s)	49
XagI	CCTNNNNNAGG	1 cut(s)	1677
XapI	RAATTY	5 cut(s)	638, 1396, 1428, 1557, 1810
XceI	RCATGY	2 cut(s)	979, 2126
XhoI	CTCGAG	1 cut(s)	591
XspI	CTAG	8 cut(s)	546, 615, 834, 864, 1191, 1251, 1643, 1923
ZrmI	AGTACT	2 cut(s)	792, 922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.