Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002965

Physical Location & Seq

Genomic Coordinates Forward (+)

5991386 .. 5995313

Gene Structure 3928 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G088000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGATCAAGGGCGTGATGTCCGATCGCGACCGTTGCTCGATCCCCCTCCTCACCATCGCTTCCTTCCTCAAACACTCTCCTCTCCTCCTCTCCAACGTTAACTTCCACCGCGACCTCCTCGGCCTCCCACGCGCCTCCCCTTTCCGCCAGTACACGCGCCTCACTGTCTGCACCGAGACCCCGGCCCAGTCCCAGGCCCTCAATTCCGGTAATCCCATTTTGAAAACCTACGATTTGGTCGCTGTCAAGCCCTTGAATCAGTCCGCCTTCGAACTCGCCTGTGAAAAATTGGAGGTAGATATAATTGCGATTGATTTCTCGGACAAGTTACCTTTTCGTTTGAAGATGCCTATGGTTAAAGCTGCAATTGAGCGTGGAGTGTTTTTCGAGATCACATATGCTAATATCATTGCCGATGATCAAGCGAGAAAGCAAATAATAACCAATGCTAAGTTACTGGTAGATTGGACTCGAGGAAGGAATATAATAGTTTCAAGTGCTGCCCCAACCGCAAATGAATTTAGGGGGCCATATGATGTTGCCAACTTAATGTCATTGCTTGGTCTCTCAATGGAGCGAGCTAAAATGGCTATTTCAAGAAATTGCAGGACTATAATATCTAATGCTATGAGAAAGAAACACTTTTTCAAGGAAGCCATAAGAGTCGAAGTTGTATCATCAGGTCAAGAAATTGACACGAACAAACCTTGGTCTATTGACTCGTTTAAATGGGATCCCATCTCTAGTGGGGATGGCGACATTCTATTAGACGATTTGGCCAAGTCTTTCACTACCTCCATTAATAAAGTATCCAAGACTACAAAAGCCATTGATTTTGCTTCAGTCATTGACAGCATGCCATCACTTGGATTTCAAGTCAAGGATGTGATATCTGGATCTGGTGTGGTTGCGTCCCAATCAATGCGTACTTGTAAAAGCATTGTTTCTGCTTCTGAGGCAATTGAGCAATCAGTCGTGACTGCTGAGGTGCCAGAACAGCCTGACAGGCTATGTTTTCCTCAATCAGGTCAAACTTCTCTGAGTGATAGTCTGTTGGAGCAACAAATGTTTGACTGTCAAAATCCTCAGAAATCATATTCATCTTCTGATACTACCAAAGCTTTTATTGATGCTATGGAAATTGAAGCTCCTACAATAACCACAGAAGCCAAACCAAAGAATCCAGATGGTACAGATGGTAATTTTGACTTGATTACAACAGAAATTCATGATTTTCAACCACAGAAGTGTGTGACTAATCGCGAATTGAATGTTGTGCCAGCTAATGATAATTTAACATTTCACACATTAGAGATTGGGTTAGATGCTGCTTGTAATGCTAATTCTGAAGTTGAAATTTCCACTAATTATCAGGATACAGATATTCCTGCTCCTCATAATGAAGAGGCTAAGTGTGTTAAAGGTTCTGATACCCAAAGTGATGTGATGGACGAAATTTTAACAGTGGTAGATGTGGAATGTAAAGAAGAAAAGTCTTTGTTGTTGAATTCATCATCATTGCCCACTTCAGAGAATGAACAATTTAGGGAATCTGGGGATGATGCAATTATACTTGCAAATCAAGTTCCTGTTCTGCAGTCCAATGGTGGTATGACAATAATTGGTGATTATTCAGTTGCAACTCATTCCTCAGCAGAGGTGACAATGGAAGGGGAAGAACATGGGAAAGTTGATACTGAAATGAACGATCCAGCCTTAATTCAATCCATACCAGATGATGCAGGGAAATCTAGACCGAAAAGGAAGACACCTTATCAAGCGAAGACCTTTCCTCTCAAGCGATTGTTGCATACTATACCTTTCAAGAAGACTCGGAAAAGTAAAAGAAAAATAAAGATGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0099116 GO:1901360 GO:1901363 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

CCT RNase_P_p30

Protein Analysis

622

Amino Acids

68.46

Weight (kDa)

5.33

Isoelectric Point (pI)

43.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59980 AT5G59980 AT5G59980 AT5G59980
fragaria_vesca	FvH4_3g34550 FvH4_3g34550
malus_domestica	MD11G1117900.v1.1
prunus_persica	Prupe.6G088000_v2.0.a1 Prupe.6G088000_v2.0.a1
pyrus_communis	pycom03g08460 pycom11g09880
rosa_chinensis	RchiOBHm_Chr4g0385531 RchiOBHm_Chr5g0062191
rosa_laevigata	RLG00000010219 RLG00000035541
rosa_multiflora	Rmu_co8004892.1_g000001 Rmu_sc0014282.1_g000010 Rmu_sc0018073.1_g000001 Rmu_ssc0000409.1_g000011
rosa_roxburghii	Rroxscaffold_1G00018520 Rroxscaffold_5G00333410
rosa_rugosa	Rorug05G0347200 Rorug07G0171200 Rorug07G0171200 Rorug07G0171300
rosa_samantha	Rh4AG006400 Rh4DG005200 Rh5AG407700 Rh5BG421400 Rh5CG445400 Rh5DG436400 Rh7AG313200 Rh7BG303900 Rh7CG331600 Rh7DG312000
rosa_wichuraiana	Rw5G038420 Rw7G026520 Rw7G028230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	988
AccB7I	CCANNNNNTGG	1 cut(s)	866
AccII	CGCG	5 cut(s)	27, 111, 132, 157, 1263
AciI	CCGC	4 cut(s)	109, 145, 264, 510
AclI	AACGTT	1 cut(s)	96
AclWI	GGATC	5 cut(s)	34, 728, 741, 904, 1703
AcoI	YGGCCR	1 cut(s)	777
AcsI	RAATTY	5 cut(s)	518, 1224, 1356, 1455, 1507
AcuI	CTGAAG	3 cut(s)	825, 1368, 1512
AfaI	GTAC	3 cut(s)	152, 928, 1192
AfiI	CCNNNNNNNGG	3 cut(s)	193, 866, 1025
AjnI	CCWGG	1 cut(s)	192
AjuI	GAANNNNNNNTTGG	2 cut(s)	86, 118
AleI	CACNNNNGTG	1 cut(s)	1246
AluBI	AGCT	5 cut(s)	362, 581, 1121, 1148, 1283
AluI	AGCT	5 cut(s)	362, 581, 1121, 1148, 1283
Alw26I	GTCTC	2 cut(s)	170, 569
AlwI	GGATC	5 cut(s)	34, 728, 741, 904, 1703
Ama87I	CYCGRG	1 cut(s)	471
AoxI	GGCC	5 cut(s)	121, 183, 195, 527, 777
ApeKI	GCWGC	3 cut(s)	362, 500, 1328
ApoI	RAATTY	5 cut(s)	518, 1224, 1356, 1455, 1507
AseI	ATTAAT	1 cut(s)	801
AspLEI	GCGC	2 cut(s)	134, 159
AspS9I	GGNCC	3 cut(s)	184, 196, 527
AsuC2I	CCSGG	1 cut(s)	182
AsuHPI	GGTGA	3 cut(s)	43, 1637, 1672
AsuII	TTCGAA	1 cut(s)	270
AvaI	CYCGRG	1 cut(s)	471
BalI	TGGCCA	1 cut(s)	779
BamHI	GGATCC	1 cut(s)	733
BanI	GGYRCC	1 cut(s)	988
BbsI	GAAGAC	3 cut(s)	1772, 1790, 1835
BbvCI	CCTCAGC	2 cut(s)	984, 1651
BbvI	GCAGC	3 cut(s)	349, 487, 1315
BccI	CCATC	8 cut(s)	62, 746, 746, 868, 1181, 1190, 1441, 1852
BciT130I	CCWGG	1 cut(s)	194
BciVI	GTATCC	2 cut(s)	820, 1369
BclI	TGATCA	2 cut(s)	3, 418
BcnI	CCSGG	1 cut(s)	182
BcoDI	GTCTC	2 cut(s)	170, 569
BfaI	CTAG	2 cut(s)	744, 1752
BfmI	CTRYAG	1 cut(s)	1595
BfuI	GTATCC	2 cut(s)	820, 1369
BglI	GCCNNNNNGGC	1 cut(s)	1006
BisI	GCNGC	3 cut(s)	363, 501, 1329
BlsI	GCNGC	3 cut(s)	364, 502, 1330
Bme1390I	CCNGG	2 cut(s)	182, 194
BmeT110I	CYCGRG	1 cut(s)	471
BmgT120I	GGNCC	3 cut(s)	184, 196, 527
BmiI	GGNNCC	3 cut(s)	528, 735, 990
BmrFI	CCNGG	2 cut(s)	182, 194
BmrI	ACTGGG	1 cut(s)	181
BmsI	GCATC	5 cut(s)	336, 1120, 1315, 1552, 1729
BmuI	ACTGGG	1 cut(s)	181
BpiI	GAAGAC	3 cut(s)	1772, 1790, 1835
Bpu10I	CCTNAGC	2 cut(s)	984, 1651
Bpu14I	TTCGAA	1 cut(s)	270
BpuEI	CTTGAG	1 cut(s)	1781
BpuMI	CCSGG	1 cut(s)	182
BsaI	GGTCTC	2 cut(s)	170, 569
BsaJI	CCNNGG	4 cut(s)	118, 180, 192, 707
BsaWI	WCCGGW	1 cut(s)	206
Bsc4I	CCNNNNNNNGG	3 cut(s)	193, 866, 1025
Bse1I	ACTGG	3 cut(s)	148, 187, 462
Bse3DI	GCAATG	3 cut(s)	408, 554, 1517
BseBI	CCWGG	1 cut(s)	194
BseDI	CCNNGG	4 cut(s)	118, 180, 192, 707
BseGI	GGATG	3 cut(s)	757, 889, 1564
BseLI	CCNNNNNNNGG	3 cut(s)	193, 866, 1025
BseMI	GCAATG	3 cut(s)	408, 554, 1517
BseMII	CTCAG	5 cut(s)	945, 975, 1031, 1100, 1665
BseNI	ACTGG	3 cut(s)	148, 187, 462
BseRI	GAGGAG	6 cut(s)	38, 69, 74, 77, 107, 1383
BseXI	GCAGC	3 cut(s)	349, 487, 1315
BsgI	GTGCAG	1 cut(s)	154
Bsh1236I	CGCG	5 cut(s)	27, 111, 132, 157, 1263
Bsh1285I	CGRYCG	2 cut(s)	25, 31
BshFI	GGCC	5 cut(s)	123, 185, 197, 529, 779
BshNI	GGYRCC	1 cut(s)	988
BsiEI	CGRYCG	2 cut(s)	25, 31
BsiHKCI	CYCGRG	1 cut(s)	471
BsiSI	CCGG	2 cut(s)	182, 207
BslFI	GGGAC	2 cut(s)	175, 898
BslI	CCNNNNNNNGG	3 cut(s)	193, 866, 1025
BsmAI	GTCTC	2 cut(s)	170, 569
BsmFI	GGGAC	2 cut(s)	175, 898
BsnI	GGCC	5 cut(s)	123, 185, 197, 529, 779
Bso31I	GGTCTC	2 cut(s)	170, 569
BsoBI	CYCGRG	1 cut(s)	471
Bsp119I	TTCGAA	1 cut(s)	270
Bsp143I	GATC	8 cut(s)	3, 22, 39, 390, 418, 733, 896, 1708
Bsp68I	TCGCGA	2 cut(s)	27, 1263
BspACI	CCGC	4 cut(s)	109, 145, 264, 510
BspANI	GGCC	5 cut(s)	123, 185, 197, 529, 779
BspCNI	CTCAG	5 cut(s)	946, 976, 1032, 1099, 1664
BspFNI	CGCG	5 cut(s)	27, 111, 132, 157, 1263
BspHI	TCATGA	1 cut(s)	1228
BspLI	GGNNCC	3 cut(s)	528, 735, 990
BspMAI	CTGCAG	1 cut(s)	1599
BspPI	GGATC	5 cut(s)	34, 728, 741, 904, 1703
BspT104I	TTCGAA	1 cut(s)	270
BspT107I	GGYRCC	1 cut(s)	988
BspTNI	GGTCTC	2 cut(s)	170, 569
BsrDI	GCAATG	3 cut(s)	408, 554, 1517
BsrI	ACTGG	3 cut(s)	148, 187, 462
BssECI	CCNNGG	4 cut(s)	118, 180, 192, 707
BssMI	GATC	8 cut(s)	3, 22, 39, 390, 418, 733, 896, 1708
BssT1I	CCWWGG	1 cut(s)	707
Bst2UI	CCWGG	1 cut(s)	194
Bst4CI	ACNGT	4 cut(s)	32, 166, 1076, 1465
Bst6I	CTCTTC	1 cut(s)	1398
BstBI	TTCGAA	1 cut(s)	270
BstC8I	GCNNGC	3 cut(s)	579, 857, 1281
BstDEI	CTNAG	7 cut(s)	450, 954, 984, 1040, 1086, 1410, 1651
BstENI	CCTNNNNNAGG	1 cut(s)	1023
BstF5I	GGATG	3 cut(s)	757, 889, 1564
BstFNI	CGCG	5 cut(s)	27, 111, 132, 157, 1263
BstHHI	GCGC	2 cut(s)	134, 159
BstKTI	GATC	8 cut(s)	6, 25, 42, 393, 421, 736, 899, 1711
BstMAI	GTCTC	2 cut(s)	170, 569
BstMBI	GATC	8 cut(s)	3, 22, 39, 390, 418, 733, 896, 1708
BstMCI	CGRYCG	2 cut(s)	25, 31
BstMWI	GCNNNNNNNGC	9 cut(s)	33, 129, 509, 587, 956, 997, 1006, 1337, 1807
BstNI	CCWGG	1 cut(s)	194
BstNSI	RCATGY	1 cut(s)	859
BstSCI	CCNGG	2 cut(s)	180, 192
BstSFI	CTRYAG	1 cut(s)	1595
BstUI	CGCG	5 cut(s)	27, 111, 132, 157, 1263
BstV1I	GCAGC	3 cut(s)	349, 487, 1315
BstV2I	GAAGAC	3 cut(s)	1772, 1790, 1835
BstX2I	RGATCY	2 cut(s)	733, 896
BstYI	RGATCY	2 cut(s)	733, 896
BsuI	GTATCC	2 cut(s)	820, 1369
BsuRI	GGCC	5 cut(s)	123, 185, 197, 529, 779
BtgZI	GCGATG	1 cut(s)	40
BtsCI	GGATG	3 cut(s)	757, 889, 1564
BtsIMutI	CAGTG	2 cut(s)	162, 1470
BtuMI	TCGCGA	2 cut(s)	27, 1263
Cac8I	GCNNGC	3 cut(s)	579, 857, 1281
CciI	TCATGA	1 cut(s)	1228
CfoI	GCGC	2 cut(s)	134, 159
Cfr13I	GGNCC	3 cut(s)	184, 196, 527
CseI	GACGC	1 cut(s)	900
Csp6I	GTAC	3 cut(s)	151, 927, 1191
CviAII	CATG	4 cut(s)	856, 1229, 1682, 1863
CviQI	GTAC	3 cut(s)	151, 927, 1191
DdeI	CTNAG	7 cut(s)	450, 954, 984, 1040, 1086, 1410, 1651
DpnI	GATC	8 cut(s)	5, 24, 41, 392, 420, 735, 898, 1710
DpnII	GATC	8 cut(s)	3, 22, 39, 390, 418, 733, 896, 1708
DraI	TTTAAA	1 cut(s)	727
EaeI	YGGCCR	1 cut(s)	777
Eam1104I	CTCTTC	1 cut(s)	1398
EarI	CTCTTC	1 cut(s)	1398
EciI	GGCGGA	2 cut(s)	134, 253
Eco130I	CCWWGG	1 cut(s)	707
Eco31I	GGTCTC	2 cut(s)	170, 569
Eco32I	GATATC	1 cut(s)	891
Eco57I	CTGAAG	3 cut(s)	825, 1368, 1512
Eco88I	CYCGRG	1 cut(s)	471
EcoNI	CCTNNNNNAGG	1 cut(s)	1023
EcoO109I	RGGNCCY	1 cut(s)	196
EcoRI	GAATTC	1 cut(s)	1507
EcoRII	CCWGG	1 cut(s)	192
EcoRV	GATATC	1 cut(s)	891
EcoT14I	CCWWGG	1 cut(s)	707
ErhI	CCWWGG	1 cut(s)	707
FaeI	CATG	4 cut(s)	859, 1232, 1685, 1866
FalI	AAGNNNNNCTT	2 cut(s)	626, 658
FaqI	GGGAC	2 cut(s)	175, 898
FatI	CATG	4 cut(s)	855, 1228, 1681, 1862
FauNDI	CATATG	2 cut(s)	397, 532
FbaI	TGATCA	2 cut(s)	3, 418
Fnu4HI	GCNGC	3 cut(s)	363, 501, 1329
FokI	GGATG	3 cut(s)	764, 896, 1571
Fsp4HI	GCNGC	3 cut(s)	363, 501, 1329
FspBI	CTAG	2 cut(s)	744, 1752
GlaI	GCGC	2 cut(s)	133, 158
GluI	GCNGC	3 cut(s)	363, 501, 1329
HaeIII	GGCC	5 cut(s)	123, 185, 197, 529, 779
HapII	CCGG	2 cut(s)	182, 207
HgaI	GACGC	1 cut(s)	900
HhaI	GCGC	2 cut(s)	134, 159
Hin1II	CATG	4 cut(s)	859, 1232, 1685, 1866
Hin6I	GCGC	2 cut(s)	132, 157
HinP1I	GCGC	2 cut(s)	132, 157
HincII	GTYRAC	1 cut(s)	100
HindII	GTYRAC	1 cut(s)	100
HindIII	AAGCTT	1 cut(s)	1119
HinfI	GANTC	7 cut(s)	256, 469, 663, 719, 1180, 1550, 1831
HpaI	GTTAAC	1 cut(s)	100
HpaII	CCGG	2 cut(s)	182, 207
HphI	GGTGA	3 cut(s)	43, 1637, 1672
Hpy166II	GTNNAC	2 cut(s)	100, 153
Hpy8I	GTNNAC	2 cut(s)	100, 153
HpyAV	CCTTC	4 cut(s)	73, 277, 471, 1664
HpyCH4III	ACNGT	4 cut(s)	32, 166, 1076, 1465
HpyCH4IV	ACGT	1 cut(s)	96
HpyCH4V	TGCA	9 cut(s)	171, 365, 606, 1565, 1577, 1597, 1640, 1742, 1810
HpyF10VI	GCNNNNNNNGC	9 cut(s)	33, 129, 509, 587, 956, 997, 1006, 1337, 1807
HpyF3I	CTNAG	7 cut(s)	450, 954, 984, 1040, 1086, 1410, 1651
HpySE526I	ACGT	1 cut(s)	96
Hsp92II	CATG	4 cut(s)	859, 1232, 1685, 1866
HspAI	GCGC	2 cut(s)	132, 157
Ksp22I	TGATCA	2 cut(s)	3, 418
KspAI	GTTAAC	1 cut(s)	100
Kzo9I	GATC	8 cut(s)	3, 22, 39, 390, 418, 733, 896, 1708
LmnI	GCTCC	4 cut(s)	574, 1057, 1153, 1396
Lsp1109I	GCAGC	3 cut(s)	349, 487, 1315
LweI	GCATC	5 cut(s)	336, 1120, 1315, 1552, 1729
MaeI	CTAG	2 cut(s)	744, 1752
MaeII	ACGT	1 cut(s)	96
MaeIII	GTNAC	5 cut(s)	327, 453, 976, 1252, 1660
MalI	GATC	8 cut(s)	5, 24, 41, 392, 420, 735, 898, 1710
MboI	GATC	8 cut(s)	3, 22, 39, 390, 418, 733, 896, 1708
MboII	GAAGA	8 cut(s)	355, 1095, 1415, 1499, 1688, 1777, 1795, 1840
MfeI	CAATTG	2 cut(s)	366, 960
MflI	RGATCY	2 cut(s)	733, 896
MlsI	TGGCCA	1 cut(s)	779
MluNI	TGGCCA	1 cut(s)	779
MlyI	GAGTC	4 cut(s)	463, 672, 713, 1825
MmeI	TCCRAC	2 cut(s)	117, 1035
Mox20I	TGGCCA	1 cut(s)	779
MscI	TGGCCA	1 cut(s)	779
MseI	TTAA	9 cut(s)	99, 357, 548, 726, 801, 1295, 1419, 1460, 1718
MslI	CAYNNNNRTG	1 cut(s)	1246
Msp20I	TGGCCA	1 cut(s)	779
MspI	CCGG	2 cut(s)	182, 207
MspR9I	CCNGG	2 cut(s)	182, 194
MunI	CAATTG	2 cut(s)	366, 960
MvaI	CCWGG	1 cut(s)	194
MvnI	CGCG	5 cut(s)	27, 111, 132, 157, 1263
MwoI	GCNNNNNNNGC	9 cut(s)	33, 129, 509, 587, 956, 997, 1006, 1337, 1807
NciI	CCSGG	1 cut(s)	182
NdeI	CATATG	2 cut(s)	397, 532
NdeII	GATC	8 cut(s)	3, 22, 39, 390, 418, 733, 896, 1708
NlaIII	CATG	4 cut(s)	859, 1232, 1685, 1866
NlaIV	GGNNCC	3 cut(s)	528, 735, 990
NmeAIII	GCCGAG	1 cut(s)	99
NmuCI	GTSAC	3 cut(s)	976, 1252, 1660
NruI	TCGCGA	2 cut(s)	27, 1263
NspI	RCATGY	1 cut(s)	859
NspV	TTCGAA	1 cut(s)	270
OliI	CACNNNNGTG	1 cut(s)	1246
PaeI	GCATGC	1 cut(s)	859
PaeR7I	CTCGAG	1 cut(s)	471
PagI	TCATGA	1 cut(s)	1228
PfeI	GAWTC	3 cut(s)	256, 1180, 1550
PflMI	CCANNNNNTGG	1 cut(s)	866
PkrI	GCNGC	3 cut(s)	364, 502, 1330
Ple19I	CGATCG	1 cut(s)	25
PleI	GAGTC	4 cut(s)	463, 671, 713, 1825
PpsI	GAGTC	4 cut(s)	463, 671, 713, 1825
PshBI	ATTAAT	1 cut(s)	801
Psp1406I	AACGTT	1 cut(s)	96
Psp6I	CCWGG	1 cut(s)	192
PspGI	CCWGG	1 cut(s)	192
PspN4I	GGNNCC	3 cut(s)	528, 735, 990
PspPI	GGNCC	3 cut(s)	184, 196, 527
PspXI	VCTCGAGB	1 cut(s)	471
PstI	CTGCAG	1 cut(s)	1599
PsuI	RGATCY	2 cut(s)	733, 896
PvuI	CGATCG	1 cut(s)	25
RruI	TCGCGA	2 cut(s)	27, 1263
RsaI	GTAC	3 cut(s)	152, 928, 1192
RsaNI	GTAC	3 cut(s)	151, 927, 1191
RseI	CAYNNNNRTG	1 cut(s)	1246
SaqAI	TTAA	9 cut(s)	99, 357, 548, 726, 801, 1295, 1419, 1460, 1718
SatI	GCNGC	3 cut(s)	363, 501, 1329
Sau3AI	GATC	8 cut(s)	3, 22, 39, 390, 418, 733, 896, 1708
Sau96I	GGNCC	3 cut(s)	184, 196, 527
SchI	GAGTC	4 cut(s)	463, 672, 713, 1825
ScrFI	CCNGG	2 cut(s)	182, 194
SfaNI	GCATC	5 cut(s)	336, 1120, 1315, 1552, 1729
SfcI	CTRYAG	1 cut(s)	1595
Sfr274I	CTCGAG	1 cut(s)	471
SfuI	TTCGAA	1 cut(s)	270
SlaI	CTCGAG	1 cut(s)	471
SmiMI	CAYNNNNRTG	1 cut(s)	1246
SmlI	CTYRAG	2 cut(s)	471, 1796
SmoI	CTYRAG	2 cut(s)	471, 1796
SphI	GCATGC	1 cut(s)	859
SsiI	CCGC	4 cut(s)	109, 145, 264, 510
SspMI	CTAG	2 cut(s)	744, 1752
StyD4I	CCNGG	2 cut(s)	180, 192
StyI	CCWWGG	1 cut(s)	707
TaaI	ACNGT	4 cut(s)	32, 166, 1076, 1465
TaiI	ACGT	1 cut(s)	99
TaqI	TCGA	5 cut(s)	38, 270, 387, 472, 666
TaqII	GACCGA	1 cut(s)	1771
TatI	WGTACW	1 cut(s)	150
TfiI	GAWTC	3 cut(s)	256, 1180, 1550
Tru1I	TTAA	9 cut(s)	99, 357, 548, 726, 801, 1295, 1419, 1460, 1718
Tru9I	TTAA	9 cut(s)	99, 357, 548, 726, 801, 1295, 1419, 1460, 1718
TscAI	CASTG	2 cut(s)	169, 1470
TseFI	GTSAC	3 cut(s)	976, 1252, 1660
TseI	GCWGC	3 cut(s)	362, 500, 1328
Tsp45I	GTSAC	3 cut(s)	976, 1252, 1660
TspDTI	ATGAA	7 cut(s)	531, 1089, 1217, 1416, 1500, 1551, 1718
TspRI	CASTG	2 cut(s)	169, 1470
Van91I	CCANNNNNTGG	1 cut(s)	866
VspI	ATTAAT	1 cut(s)	801
XagI	CCTNNNNNAGG	1 cut(s)	1023
XapI	RAATTY	5 cut(s)	518, 1224, 1356, 1455, 1507
XbaI	TCTAGA	1 cut(s)	1751
XceI	RCATGY	1 cut(s)	859
XhoI	CTCGAG	1 cut(s)	471
XspI	CTAG	2 cut(s)	744, 1752

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.