Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002965

Physical Location & Seq

Genomic Coordinates Reverse (-)

67700865 .. 67704034

Gene Structure 3170 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G038420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGTCCGATCGCGACCGTTGCTCCATCCCCCTCCTCACTCTCCCTTCTCTCCTCAAACACTCTCCTCACCTCACCTCCTCCGTCGGCTTCCACCGCGACCTCCTCGGCGTCCCACGCGCCACCCCTTTCCGCCAGTACACGCGCCTCACCGTCTGCGCCGAAACCCCTGCCCAGGCTCAGGCCCTCAATTCCGGCAACCCCGTCTTGAAGACCTACGATTTGGTGGCTGTCAAGCCCATGAACCAGTCCGCTTTCGATCAGGCCTGTGAGAAATTGGAGGTAGATATAATTGCGATTGATTTTTCCGAGAAGTTACCATTTCGATTGAAGCAGCCTCTGGTTAAAGCTGCCATAGAGCGGAAGGTGTATTTTGAGATCACATATGCAGGGCTTATTGCCGATGTTCAAACTAGAAGGCAAATTATAACCAATGCTAAGTTATTGGTAGATTGGACTCGAGGAAGGAATATAATTATCTCTAGTGCTGCCCCAACTGCGAATGAATTTAGAGGGCCATATGATGTTGCAAACTTAGTGTCATTGCTCGGTCTCTCCATGGAACGAGCTAAGGCGGCTATTTCAAGAAATTGTAGGACTCTTATATCTAATGCAGTGAGAAAAAAACACTATTATAAGGAAGCCATTAGAGTTGAAGTACTACCATCAGGTCAAGAAAGTGATGGGAACAAACCTTCGTCTAGTGACTCTTTTAATTGGGATCCCATCTCTAGTGGTGAAGGTGATTTGCTTTTAGATGATTTGGCAAAGGCTTTCAGTAACTCCAGTACTAAAGCAACCAAATTGGTCAAAGCCATTGATTTTGCTTCGGTTATTGACAGCATGCCATCACTTGGATTTCAAGTTAACGATCTTATATCTGGAACTAATGTGGTTGTGTCACAACCATTGGCTACTCAGAAAAACATCGTTTCTGCTCCCCAGTTAAATGTGCAATCAGTTGCAACTGATGGAGTACAAGAACAATCTGTTTTATGTGATACTATGTTGGAGCGGCAAATTAGGTTCAAAAGCAAAAATCCTCAGAAATTATATTCATCTAGCGATACTACCAAAGCTGTTAACAATGTTATTCCAATTGAGGATCCTTTGATAACCACTAGAGCAGAACCAAATAGTCCAGATGAAACAGATGGGATTGCCACAGATATTCATGATGTGCAATCACAGAAGTCTGCGATTGCAAATGCTGTTAATGATGTTATGGAAATTGAAGTTCCTACAACCACTGGAGCAGAACCAATGAATTCAGCTGAATCAATGGGGATTACAAAAGAAATTCATGATGTGCAATCACTGAAGTCTATGACTGCCAAAACTTTTAAAGATGCTATGGAAATTGAAGCTCCTACGACCACTGGAGCGGAAACAAAGAATCCGGATGGAATAGATGGGGTTACTACAGAAGTTCTTAATGTTCTATCACAGAAGAGTATGACTAATTGCGAATTGAATGTTGTGCCAGCTCAGGTTAATTTAACATATCATGCACTAGACATTGGGTTGAGTGTTGCTTCTAATCCTGAATCAGGAGTTCAAGTTCCCACTAATTATCAGGACAGTGATATTCCCGGTCCTCATAATGAAGAGGCTGATAGTATTAAAAATAATGATATACAAAGTGATTTAGTGGATGAAGTTCTAACAGATAAAGAAAAAAAATCTTTGCCTCTGGATTCAGCATTGGATAAAAGTATTTTGGAAGTGGATGAATTGACGGAACCTGGAGATGATGCAGTTGTACTTGCAAATCAGGTTCCTGTTCTGGATTCTAGTGATGAGATGACAGCAACTGATGATTATTCAGTTGCAAATCATGAGACAGCAGAGGTAATAATGGATGAGCAAGAACACGGGAAAGCTGACGTTGAATTGAGCTATCCAGCCTTGGTTCAGTCTGAATCAGGGAAATCCAAGGCAAAAAGGAAGAAACCTCATCAGGTGACATTTCTTCCTCTCAAGCGATTGCTGCATGCTACACCTTTTAAGAAGGCTCGGAAAAGTAAAAGGAGACATAAGATGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0099116 GO:1901360 GO:1901363 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

CCT RNase_P_p30

Protein Analysis

681

Amino Acids

74.34

Weight (kDa)

5.24

Isoelectric Point (pI)

41.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_P_p30	PF01876	40 - 196	9.4e-48	RNase P subunit p30

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59980 AT5G59980 AT5G59980 AT5G59980
fragaria_vesca	FvH4_3g34550 FvH4_3g34550
malus_domestica	MD11G1117900.v1.1
prunus_persica	Prupe.6G088000_v2.0.a1 Prupe.6G088000_v2.0.a1
pyrus_communis	pycom03g08460 pycom11g09880
rosa_chinensis	RchiOBHm_Chr4g0385531 RchiOBHm_Chr5g0062191
rosa_laevigata	RLG00000010219 RLG00000035541
rosa_multiflora	Rmu_co8004892.1_g000001 Rmu_sc0014282.1_g000010 Rmu_sc0018073.1_g000001 Rmu_ssc0000409.1_g000011
rosa_roxburghii	Rroxscaffold_1G00018520 Rroxscaffold_5G00333410
rosa_rugosa	Rorug05G0347200 Rorug07G0171200 Rorug07G0171200 Rorug07G0171300
rosa_samantha	Rh4AG006400 Rh4DG005200 Rh5AG407700 Rh5BG421400 Rh5CG445400 Rh5DG436400 Rh7AG313200 Rh7BG303900 Rh7CG331600 Rh7DG312000
rosa_wichuraiana	Rw5G038420 Rw7G026520 Rw7G028230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	425, 633
AccB7I	CCANNNNNTGG	1 cut(s)	851
AccBSI	CCGCTC	3 cut(s)	358, 1012, 1382
AccII	CGCG	4 cut(s)	12, 96, 117, 142
AccIII	TCCGGA	1 cut(s)	1396
AciI	CCGC	7 cut(s)	94, 130, 249, 358, 572, 1012, 1382
AclWI	GGATC	4 cut(s)	713, 726, 1097, 1110
AcsI	RAATTY	3 cut(s)	503, 1264, 1296
AcuI	CTGAAG	1 cut(s)	1337
AcyI	GRCGYC	1 cut(s)	108
AfaI	GTAC	5 cut(s)	137, 657, 787, 975, 1761
AfiI	CCNNNNNNNGG	5 cut(s)	172, 178, 357, 851, 1547
AjnI	CCWGG	2 cut(s)	171, 1741
AloI	GAACNNNNNNTCC	2 cut(s)	1542, 1574
AluBI	AGCT	8 cut(s)	347, 566, 1076, 1271, 1364, 1484, 1880, 1896
AluI	AGCT	8 cut(s)	347, 566, 1076, 1271, 1364, 1484, 1880, 1896
Alw26I	GTCTC	3 cut(s)	554, 1832, 2023
AlwI	GGATC	4 cut(s)	713, 726, 1097, 1110
AlwNI	CAGNNNCTG	2 cut(s)	337, 1811
Ama87I	CYCGRG	1 cut(s)	456
Aor13HI	TCCGGA	1 cut(s)	1396
AoxI	GGCC	3 cut(s)	180, 261, 512
ApeKI	GCWGC	4 cut(s)	331, 347, 485, 1987
ApoI	RAATTY	3 cut(s)	503, 1264, 1296
ArsI	GACNNNNNNTTYG	4 cut(s)	202, 234, 521, 553
AspLEI	GCGC	3 cut(s)	119, 144, 158
AspS9I	GGNCC	3 cut(s)	181, 512, 1592
AsuC2I	CCSGG	1 cut(s)	1590
AsuHPI	GGTGA	6 cut(s)	59, 64, 139, 746, 752, 1972
AvaI	CYCGRG	1 cut(s)	456
AvaII	GGWCC	1 cut(s)	1592
BamHI	GGATCC	2 cut(s)	718, 1102
BbsI	GAAGAC	1 cut(s)	215
BbvI	GCAGC	4 cut(s)	334, 343, 472, 1974
BcgI	CGANNNNNNTGC	2 cut(s)	149, 183
BciT130I	CCWGG	2 cut(s)	173, 1743
BcnI	CCSGG	1 cut(s)	1590
BcoDI	GTCTC	3 cut(s)	554, 1832, 2023
BfaI	CTAG	8 cut(s)	411, 480, 699, 729, 1059, 1119, 1511, 1791
BfmI	CTRYAG	1 cut(s)	1419
BisI	GCNGC	6 cut(s)	332, 348, 486, 573, 1013, 1988
BlsI	GCNGC	6 cut(s)	333, 349, 487, 574, 1014, 1989
BmcAI	AGTACT	2 cut(s)	657, 787
Bme1390I	CCNGG	3 cut(s)	173, 1590, 1743
Bme18I	GGWCC	1 cut(s)	1592
BmeT110I	CYCGRG	1 cut(s)	456
BmgT120I	GGNCC	3 cut(s)	181, 512, 1592
BmiI	GGNNCC	4 cut(s)	720, 1104, 1740, 1776
BmrFI	CCNGG	3 cut(s)	173, 1590, 1743
BmrI	ACTGGG	1 cut(s)	934
BmsI	GCATC	2 cut(s)	1336, 1741
BmuI	ACTGGG	1 cut(s)	934
BpiI	GAAGAC	1 cut(s)	215
BpmI	CTGGAG	4 cut(s)	766, 1269, 1398, 1764
Bpu10I	CCTNAGC	3 cut(s)	177, 567, 1485
BpuEI	CTTGAG	1 cut(s)	1961
BpuMI	CCSGG	1 cut(s)	1590
BsaHI	GRCGYC	1 cut(s)	108
BsaI	GGTCTC	1 cut(s)	554
BsaJI	CCNNGG	5 cut(s)	103, 171, 555, 1905, 1932
BsaWI	WCCGGW	1 cut(s)	1396
BsaXI	ACNNNNNCTCC	6 cut(s)	5, 35, 59, 89, 1542, 1572
Bsc4I	CCNNNNNNNGG	5 cut(s)	172, 178, 357, 851, 1547
Bse1I	ACTGG	6 cut(s)	133, 244, 783, 940, 1252, 1381
Bse3DI	GCAATG	1 cut(s)	539
BseAI	TCCGGA	1 cut(s)	1396
BseBI	CCWGG	2 cut(s)	173, 1743
BseDI	CCNNGG	5 cut(s)	103, 171, 555, 1905, 1932
BseGI	GGATG	5 cut(s)	24, 1405, 1657, 1732, 1864
BseLI	CCNNNNNNNGG	5 cut(s)	172, 178, 357, 851, 1547
BseMI	GCAATG	1 cut(s)	539
BseMII	CTCAG	4 cut(s)	191, 929, 1055, 1499
BseNI	ACTGG	6 cut(s)	133, 244, 783, 940, 1252, 1381
BseRI	GAGGAG	5 cut(s)	23, 41, 54, 67, 92
BseXI	GCAGC	4 cut(s)	334, 343, 472, 1974
Bsh1236I	CGCG	4 cut(s)	12, 96, 117, 142
Bsh1285I	CGRYCG	2 cut(s)	10, 16
BshFI	GGCC	3 cut(s)	182, 263, 514
BsiEI	CGRYCG	2 cut(s)	10, 16
BsiHKCI	CYCGRG	1 cut(s)	456
BsiSI	CCGG	3 cut(s)	192, 1397, 1590
BslFI	GGGAC	1 cut(s)	95
BslI	CCNNNNNNNGG	5 cut(s)	172, 178, 357, 851, 1547
BsmAI	GTCTC	3 cut(s)	554, 1832, 2023
BsmFI	GGGAC	1 cut(s)	95
BsnI	GGCC	3 cut(s)	182, 263, 514
Bso31I	GGTCTC	1 cut(s)	554
BsoBI	CYCGRG	1 cut(s)	456
Bsp13I	TCCGGA	1 cut(s)	1396
Bsp143I	GATC	6 cut(s)	7, 256, 375, 718, 868, 1102
Bsp19I	CCATGG	1 cut(s)	555
Bsp68I	TCGCGA	1 cut(s)	12
BspACI	CCGC	7 cut(s)	94, 130, 249, 358, 572, 1012, 1382
BspANI	GGCC	3 cut(s)	182, 263, 514
BspCNI	CTCAG	4 cut(s)	190, 928, 1054, 1498
BspEI	TCCGGA	1 cut(s)	1396
BspFNI	CGCG	4 cut(s)	12, 96, 117, 142
BspHI	TCATGA	3 cut(s)	1171, 1300, 1834
BspLI	GGNNCC	4 cut(s)	720, 1104, 1740, 1776
BspPI	GGATC	4 cut(s)	713, 726, 1097, 1110
BspTNI	GGTCTC	1 cut(s)	554
BsrBI	CCGCTC	3 cut(s)	358, 1012, 1382
BsrDI	GCAATG	1 cut(s)	539
BsrI	ACTGG	6 cut(s)	133, 244, 783, 940, 1252, 1381
BssECI	CCNNGG	5 cut(s)	103, 171, 555, 1905, 1932
BssMI	GATC	6 cut(s)	7, 256, 375, 718, 868, 1102
BssNI	GRCGYC	1 cut(s)	108
BssT1I	CCWWGG	3 cut(s)	555, 1905, 1932
Bst2UI	CCWGG	2 cut(s)	173, 1743
Bst4CI	ACNGT	3 cut(s)	17, 151, 1580
Bst6I	CTCTTC	2 cut(s)	1442, 1599
BstACI	GRCGYC	1 cut(s)	108
BstC8I	GCNNGC	3 cut(s)	842, 1482, 1992
BstDEI	CTNAG	7 cut(s)	177, 435, 532, 567, 915, 1041, 1485
BstDSI	CCRYGG	1 cut(s)	555
BstENI	CCTNNNNNAGG	1 cut(s)	1545
BstF5I	GGATG	5 cut(s)	24, 1405, 1657, 1732, 1864
BstFNI	CGCG	4 cut(s)	12, 96, 117, 142
BstHHI	GCGC	3 cut(s)	119, 144, 158
BstKTI	GATC	6 cut(s)	10, 259, 378, 721, 871, 1105
BstMAI	GTCTC	3 cut(s)	554, 1832, 2023
BstMBI	GATC	6 cut(s)	7, 256, 375, 718, 868, 1102
BstMCI	CGRYCG	2 cut(s)	10, 16
BstMWI	GCNNNNNNNGC	6 cut(s)	18, 93, 114, 494, 572, 1987
BstNI	CCWGG	2 cut(s)	173, 1743
BstNSI	RCATGY	2 cut(s)	844, 1994
BstSCI	CCNGG	3 cut(s)	171, 1588, 1741
BstSFI	CTRYAG	1 cut(s)	1419
BstUI	CGCG	4 cut(s)	12, 96, 117, 142
BstV1I	GCAGC	4 cut(s)	334, 343, 472, 1974
BstV2I	GAAGAC	1 cut(s)	215
BstX2I	RGATCY	2 cut(s)	718, 1102
BstYI	RGATCY	2 cut(s)	718, 1102
BsuRI	GGCC	3 cut(s)	182, 263, 514
BtgI	CCRYGG	1 cut(s)	555
BtsCI	GGATG	5 cut(s)	24, 1405, 1657, 1732, 1864
BtsI	GCAGTG	1 cut(s)	618
BtsIMutI	CAGTG	5 cut(s)	618, 1245, 1313, 1374, 1585
BtuMI	TCGCGA	1 cut(s)	12
Cac8I	GCNNGC	3 cut(s)	842, 1482, 1992
CaiI	CAGNNNCTG	2 cut(s)	337, 1811
CciI	TCATGA	3 cut(s)	1171, 1300, 1834
CfoI	GCGC	3 cut(s)	119, 144, 158
Cfr13I	GGNCC	3 cut(s)	181, 512, 1592
CseI	GACGC	1 cut(s)	97
Csp6I	GTAC	5 cut(s)	136, 656, 786, 974, 1760
CviAII	CATG	8 cut(s)	238, 556, 841, 1172, 1301, 1505, 1835, 1991
CviQI	GTAC	5 cut(s)	136, 656, 786, 974, 1760
DdeI	CTNAG	7 cut(s)	177, 435, 532, 567, 915, 1041, 1485
DpnI	GATC	6 cut(s)	9, 258, 377, 720, 870, 1104
DpnII	GATC	6 cut(s)	7, 256, 375, 718, 868, 1102
DraI	TTTAAA	1 cut(s)	1342
Eam1104I	CTCTTC	2 cut(s)	1442, 1599
EarI	CTCTTC	2 cut(s)	1442, 1599
EciI	GGCGGA	1 cut(s)	119
Eco130I	CCWWGG	3 cut(s)	555, 1905, 1932
Eco147I	AGGCCT	1 cut(s)	263
Eco31I	GGTCTC	1 cut(s)	554
Eco47I	GGWCC	1 cut(s)	1592
Eco57I	CTGAAG	1 cut(s)	1337
Eco88I	CYCGRG	1 cut(s)	456
EcoNI	CCTNNNNNAGG	1 cut(s)	1545
EcoO109I	RGGNCCY	1 cut(s)	181
EcoRI	GAATTC	1 cut(s)	1264
EcoRII	CCWGG	2 cut(s)	171, 1741
EcoT14I	CCWWGG	3 cut(s)	555, 1905, 1932
ErhI	CCWWGG	3 cut(s)	555, 1905, 1932
FaeI	CATG	8 cut(s)	241, 559, 844, 1175, 1304, 1508, 1838, 1994
FaqI	GGGAC	1 cut(s)	95
FatI	CATG	8 cut(s)	237, 555, 840, 1171, 1300, 1504, 1834, 1990
FauNDI	CATATG	2 cut(s)	382, 517
Fnu4HI	GCNGC	6 cut(s)	332, 348, 486, 573, 1013, 1988
FokI	GGATG	5 cut(s)	11, 1412, 1664, 1739, 1871
Fsp4HI	GCNGC	6 cut(s)	332, 348, 486, 573, 1013, 1988
FspBI	CTAG	8 cut(s)	411, 480, 699, 729, 1059, 1119, 1511, 1791
GlaI	GCGC	3 cut(s)	118, 143, 157
GluI	GCNGC	6 cut(s)	332, 348, 486, 573, 1013, 1988
GsuI	CTGGAG	4 cut(s)	766, 1269, 1398, 1764
HaeIII	GGCC	3 cut(s)	182, 263, 514
HapII	CCGG	3 cut(s)	192, 1397, 1590
HgaI	GACGC	1 cut(s)	97
HhaI	GCGC	3 cut(s)	119, 144, 158
Hin1I	GRCGYC	1 cut(s)	108
Hin1II	CATG	8 cut(s)	241, 559, 844, 1175, 1304, 1508, 1838, 1994
Hin6I	GCGC	3 cut(s)	117, 142, 156
HinP1I	GCGC	3 cut(s)	117, 142, 156
HincII	GTYRAC	2 cut(s)	865, 1081
HindII	GTYRAC	2 cut(s)	865, 1081
HinfI	GANTC	9 cut(s)	454, 595, 704, 1274, 1393, 1544, 1694, 1787, 1919
HpaI	GTTAAC	2 cut(s)	865, 1081
HpaII	CCGG	3 cut(s)	192, 1397, 1590
HphI	GGTGA	6 cut(s)	59, 64, 139, 746, 752, 1972
Hpy166II	GTNNAC	3 cut(s)	138, 865, 1081
Hpy188I	TCNGA	6 cut(s)	7, 307, 918, 1044, 1918, 2016
Hpy8I	GTNNAC	3 cut(s)	138, 865, 1081
Hpy99I	CGWCG	1 cut(s)	86
HpyAV	CCTTC	7 cut(s)	54, 355, 408, 456, 702, 731, 2002
HpyCH4III	ACNGT	3 cut(s)	17, 151, 1580
HpyCH4IV	ACGT	1 cut(s)	1884
HpyF10VI	GCNNNNNNNGC	6 cut(s)	18, 93, 114, 494, 572, 1987
HpyF3I	CTNAG	7 cut(s)	177, 435, 532, 567, 915, 1041, 1485
HpySE526I	ACGT	1 cut(s)	1884
Hsp92I	GRCGYC	1 cut(s)	108
Hsp92II	CATG	8 cut(s)	241, 559, 844, 1175, 1304, 1508, 1838, 1994
HspAI	GCGC	3 cut(s)	117, 142, 156
Kpn2I	TCCGGA	1 cut(s)	1396
KspAI	GTTAAC	2 cut(s)	865, 1081
Kzo9I	GATC	6 cut(s)	7, 256, 375, 718, 868, 1102
LmnI	GCTCC	6 cut(s)	26, 940, 1009, 1250, 1369, 1379
Lsp1109I	GCAGC	4 cut(s)	334, 343, 472, 1974
LweI	GCATC	2 cut(s)	1336, 1741
MaeI	CTAG	8 cut(s)	411, 480, 699, 729, 1059, 1119, 1511, 1791
MaeII	ACGT	1 cut(s)	1884
MaeIII	GTNAC	6 cut(s)	312, 701, 776, 897, 1414, 1960
MalI	GATC	6 cut(s)	9, 258, 377, 720, 870, 1104
MbiI	CCGCTC	3 cut(s)	358, 1012, 1382
MboI	GATC	6 cut(s)	7, 256, 375, 718, 868, 1102
MboII	GAAGA	5 cut(s)	220, 1459, 1616, 1957, 1961
MfeI	CAATTG	1 cut(s)	1095
MflI	RGATCY	2 cut(s)	718, 1102
MlyI	GAGTC	3 cut(s)	448, 589, 698
MmeI	TCCRAC	1 cut(s)	987
MroI	TCCGGA	1 cut(s)	1396
MspA1I	CMGCKG	1 cut(s)	1271
MspI	CCGG	3 cut(s)	192, 1397, 1590
MspR9I	CCNGG	3 cut(s)	173, 1590, 1743
MunI	CAATTG	1 cut(s)	1095
MvaI	CCWGG	2 cut(s)	173, 1743
MvnI	CGCG	4 cut(s)	12, 96, 117, 142
MwoI	GCNNNNNNNGC	6 cut(s)	18, 93, 114, 494, 572, 1987
NciI	CCSGG	1 cut(s)	1590
NcoI	CCATGG	1 cut(s)	555
NdeI	CATATG	2 cut(s)	382, 517
NdeII	GATC	6 cut(s)	7, 256, 375, 718, 868, 1102
NlaIII	CATG	8 cut(s)	241, 559, 844, 1175, 1304, 1508, 1838, 1994
NlaIV	GGNNCC	4 cut(s)	720, 1104, 1740, 1776
NmeAIII	GCCGAG	1 cut(s)	84
NmuCI	GTSAC	3 cut(s)	701, 897, 1960
NruI	TCGCGA	1 cut(s)	12
NspI	RCATGY	2 cut(s)	844, 1994
PaeI	GCATGC	2 cut(s)	844, 1994
PaeR7I	CTCGAG	1 cut(s)	456
PagI	TCATGA	3 cut(s)	1171, 1300, 1834
PceI	AGGCCT	1 cut(s)	263
PfeI	GAWTC	6 cut(s)	1274, 1393, 1544, 1694, 1787, 1919
PflMI	CCANNNNNTGG	1 cut(s)	851
PkrI	GCNGC	6 cut(s)	333, 349, 487, 574, 1014, 1989
Ple19I	CGATCG	1 cut(s)	10
PleI	GAGTC	3 cut(s)	448, 589, 698
PpsI	GAGTC	3 cut(s)	448, 589, 698
PsiI	TTATAA	2 cut(s)	425, 633
Psp6I	CCWGG	2 cut(s)	171, 1741
PspGI	CCWGG	2 cut(s)	171, 1741
PspN4I	GGNNCC	4 cut(s)	720, 1104, 1740, 1776
PspPI	GGNCC	3 cut(s)	181, 512, 1592
PspXI	VCTCGAGB	1 cut(s)	456
PstNI	CAGNNNCTG	2 cut(s)	337, 1811
PsuI	RGATCY	2 cut(s)	718, 1102
PvuI	CGATCG	1 cut(s)	10
PvuII	CAGCTG	1 cut(s)	1271
RruI	TCGCGA	1 cut(s)	12
RsaI	GTAC	5 cut(s)	137, 657, 787, 975, 1761
RsaNI	GTAC	5 cut(s)	136, 656, 786, 974, 1760
SatI	GCNGC	6 cut(s)	332, 348, 486, 573, 1013, 1988
Sau3AI	GATC	6 cut(s)	7, 256, 375, 718, 868, 1102
Sau96I	GGNCC	3 cut(s)	181, 512, 1592
ScaI	AGTACT	2 cut(s)	657, 787
SchI	GAGTC	3 cut(s)	448, 589, 698
ScrFI	CCNGG	3 cut(s)	173, 1590, 1743
SfaNI	GCATC	2 cut(s)	1336, 1741
SfcI	CTRYAG	1 cut(s)	1419
Sfr274I	CTCGAG	1 cut(s)	456
SinI	GGWCC	1 cut(s)	1592
SlaI	CTCGAG	1 cut(s)	456
SmlI	CTYRAG	2 cut(s)	456, 1976
SmoI	CTYRAG	2 cut(s)	456, 1976
SphI	GCATGC	2 cut(s)	844, 1994
SseBI	AGGCCT	1 cut(s)	263
SsiI	CCGC	7 cut(s)	94, 130, 249, 358, 572, 1012, 1382
SspMI	CTAG	8 cut(s)	411, 480, 699, 729, 1059, 1119, 1511, 1791
StuI	AGGCCT	1 cut(s)	263
StyD4I	CCNGG	3 cut(s)	171, 1588, 1741
StyI	CCWWGG	3 cut(s)	555, 1905, 1932
TaaI	ACNGT	3 cut(s)	17, 151, 1580
TaiI	ACGT	1 cut(s)	1887
TaqI	TCGA	3 cut(s)	255, 322, 457
TaqII	GACCGA	1 cut(s)	536
TatI	WGTACW	5 cut(s)	135, 655, 785, 973, 1759
TauI	GCSGC	2 cut(s)	575, 1015
TfiI	GAWTC	6 cut(s)	1274, 1393, 1544, 1694, 1787, 1919
TscAI	CASTG	5 cut(s)	618, 1252, 1320, 1381, 1585
TseFI	GTSAC	3 cut(s)	701, 897, 1960
TseI	GCWGC	4 cut(s)	331, 347, 485, 1987
Tsp45I	GTSAC	3 cut(s)	701, 897, 1960
TspGWI	ACGGA	2 cut(s)	70, 1751
TspRI	CASTG	5 cut(s)	618, 1252, 1320, 1381, 1585
Van91I	CCANNNNNTGG	1 cut(s)	851
VpaK11BI	GGWCC	1 cut(s)	1592
XagI	CCTNNNNNAGG	1 cut(s)	1545
XapI	RAATTY	3 cut(s)	503, 1264, 1296
XceI	RCATGY	2 cut(s)	844, 1994
XhoI	CTCGAG	1 cut(s)	456
XspI	CTAG	8 cut(s)	411, 480, 699, 729, 1059, 1119, 1511, 1791
ZrmI	AGTACT	2 cut(s)	657, 787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.