Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0002965

Physical Location & Seq

Genomic Coordinates Reverse (-)

35228649 .. 35236721

Gene Structure 8073 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG313200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGCCATCGTTCTATAATCAAGTCACACGTAGATTTCGATCGTGGTTTCTGGAGGAAGTACCGTCGAAACAGAGAGAGCGAGAAAGAGACCGAGAGAGAGTGGTGATTTCATTTTGCTGCGAGGGGAAAGAAGATCTGTGTCGAATCTGTCTGCAAGATTCAGATCGGTGGAGAGAAAGCGTTTTGTATCGAAGAGACAGAGAGAGACTCTTAATATTGTTGGAGAAGAGGCTTCCAACATTGAAGATAGGACATTGGTTGATAGCAGCAATGGGCTTCTTCGACCTGAGCGTACCCTACACCGACCTCCCGCCGCCGGACCGCTCAACCCGCGCAAAGCTCGTGACCAAGGCCCTCGAGCTCGGCTACTCCGCCGTCGCCTACAACCGTACGATCAAGGGCGTCATGTCCGATCGCGACCGTTGCTCCATCCCCATCCTCACTCTCCCTTCTCTCCTCAAACACTCTCCTCACCTCACCTCCTCCCTCGGCTTCCACCGCGACCTCCTCGGCGTCCCACACGCCACCCCTTTCCGCCAGTACATGCGCCTCACCGTCTGCGCCGAAACCCCTGCTCAGGCTCAGGCCCTCAATTCCGGCAACCCCATTTTGAAGACCTATGATTTGGTGGCTGTCAAGCCCATGAACCAGTCCGCTTTCGATCAGGCCTGTGAGAAATTGGAGGTAGATATAATTGCGATTGATTTTTCGGAGAAGTTACCATTTCGATTGAAGAAGCCTCTGGTTAAAGCTGCCATTGAGCGGAAGGTGTATTTTGAGATCACATATGCAGGGCTTATTGCCGATGTTCAAACTAGAAGGCAAATTATTACCAATGCTAAGTTATTGGTAGATTGGACTCGAGGAAGGAATATAATTATCTCTAGTGCTGCCCCAACTGCGAATGAATTTAGAGGGCCATTTGATGTTGCAAACTTAATGTCATTGCTCGGTCTCTCCATGGAACGAGCTAAGGCGGCTATTTCAAGAAATTGTAGGACTCTTATATCTAATGCAGTGAGGAAAAAACACTATTATAAGAAAGCCATTAGAGTTGAAGTATTACCATCAGGTCAAGAAAGTGATGGGAACAAACCTTCGTCTAGTGGCTCTTTTAATTGGGATCCCATCTCTAGTGGTGAAGGTGATTTGCTTTTAGATGATTTGGCAAAGGCTTTCAGTAACTCCAGTACTAAAGCAACCAAAATGGTCAAAGCCATTGATTTTGCTTCGTTTATTGACAGCATGCCATCACTGGGATTTCAAGTTAACGATCTTATAGCTGGAACTAATGTGGTTGTGTCACAACCATTGGCTACTCAGAAAAACATCGTTTCTGCTCCCCAGTTAAATGTGCAATCAGTTGCAACTGATGGAGTACAAGAACAATCTGTTTTATGTGATACTATGTTGGAGCGGCAAAGGTTCAAAAGCGAAAATCCTCAGAAATTATATTCATCTAGTGATACTACCAAAGCTGTTAACAATGTTATTCCAATTGAAGATCCTTCGATAACCACAAGAGCAGAACCAAATAGTCCAGATGAAACAGATGGGATTGCTACAGATATTCATGATGTGCAATCACAGAAGTCTGCGATTGCAAATGCTGTTAATGATGTTATGGAAATTGAAGTTCCTACAACCACTGGAGCAGAACCAACGAATTCAGCTGAATCAATGGGGATTACAAAAGAAATTCATGATGTGCAATCACTGAAGTCTGTGACTGCCAAAACTTTAAAAGATGCTATGGAAATTGAAGCTCCTACGACCACTGGAGCGGAAACAAAGAATCCGGATGGAATAGATGGGGTTACTACAGAAATTCTTAATGTTCTATCACAGAAGAGTATGACTAATTCCGAATTGAATGTTGTGCCATCTCAGGTTAATTTAACATATCATGCACTAGACATTGGGTTGAGTGTTGCTTGTAATCCTGATTCTGAAGTTCAGGTTCCCACTAATTATCAGGACACTGATATTCCCGGTCCTCATAATGAAGAGGTTGATAGTATTAAAAATAATGATATACAAAGTAATTTAGTGGATGAAGTTCTAACAGGTAAAGAAAAAAAATCTTTGCCTCTGGATTCAGCATTGGATACAAGTATTTTGGAAGTGGATGAATTGACGGAACCTGGAGATGATGTAGTTGTACTTGCAAATCAGGTTCCTGTTCTGGATTCTAGTGATGAGATGACAGCAACTGATGATTATTCAGTTGCAAATCATGAGACAGCAGAGGTAATAATGCATGAGCAAGAACATGGGAAAGCTGATGTTGAATTTAGCTATCCAGCCTTGGTTCAGTCTGAATCAGGGAAATCCAAGGCAAAAAGGAAGAAACCTCATCAGGTGACATTTCTTCCGCTCAAGCGATTGCTGCATGCTACACCTTTTAAGAAGGCTCGGAAAAGTAAAAGGAGACATAAGATGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0099116 GO:1901360 GO:1901363 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

CCT RNase_P_p30

Protein Analysis

815

Amino Acids

90.33

Weight (kDa)

5.92

Isoelectric Point (pI)

46.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_P_p30	PF01876	95 - 331	4.2e-51	RNase P subunit p30

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59980 AT5G59980 AT5G59980 AT5G59980
fragaria_vesca	FvH4_3g34550 FvH4_3g34550
malus_domestica	MD11G1117900.v1.1
prunus_persica	Prupe.6G088000_v2.0.a1 Prupe.6G088000_v2.0.a1
pyrus_communis	pycom03g08460 pycom11g09880
rosa_chinensis	RchiOBHm_Chr4g0385531 RchiOBHm_Chr5g0062191
rosa_laevigata	RLG00000010219 RLG00000035541
rosa_multiflora	Rmu_co8004892.1_g000001 Rmu_sc0014282.1_g000010 Rmu_sc0018073.1_g000001 Rmu_ssc0000409.1_g000011
rosa_roxburghii	Rroxscaffold_1G00018520 Rroxscaffold_5G00333410
rosa_rugosa	Rorug05G0347200 Rorug07G0171200 Rorug07G0171200 Rorug07G0171300
rosa_samantha	Rh4AG006400 Rh4DG005200 Rh5AG407700 Rh5BG421400 Rh5CG445400 Rh5DG436400 Rh7AG313200 Rh7BG303900 Rh7CG331600 Rh7DG312000
rosa_wichuraiana	Rw5G038420 Rw7G026520 Rw7G028230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1038
AccBSI	CCGCTC	5 cut(s)	324, 763, 1417, 1784, 2377
AccII	CGCG	3 cut(s)	333, 417, 501
AccIII	TCCGGA	1 cut(s)	1798
AclWI	GGATC	3 cut(s)	1118, 1131, 1499
AcsI	RAATTY	5 cut(s)	908, 1666, 1698, 1827, 2291
AcuI	CTGAAG	2 cut(s)	1739, 1971
AcyI	GRCGYC	2 cut(s)	402, 513
AfaI	GTAC	7 cut(s)	60, 294, 391, 542, 1192, 1380, 2163
AfiI	CCNNNNNNNGG	4 cut(s)	316, 577, 762, 1256
AflIII	ACRYGT	1 cut(s)	26
AjnI	CCWGG	1 cut(s)	2143
Alw21I	GWGCWC	1 cut(s)	363
Alw26I	GTCTC	6 cut(s)	81, 189, 199, 959, 2234, 2425
AlwI	GGATC	3 cut(s)	1118, 1131, 1499
AlwNI	CAGNNNCTG	1 cut(s)	2213
Ama87I	CYCGRG	2 cut(s)	356, 861
Aor13HI	TCCGGA	1 cut(s)	1798
AoxI	GGCC	4 cut(s)	351, 585, 666, 917
ApeKI	GCWGC	5 cut(s)	117, 266, 752, 890, 2389
ApoI	RAATTY	5 cut(s)	908, 1666, 1698, 1827, 2291
ArsI	GACNNNNNNTTYG	4 cut(s)	607, 639, 926, 958
AspLEI	GCGC	3 cut(s)	335, 549, 563
AspS9I	GGNCC	5 cut(s)	319, 352, 586, 917, 1994
AsuC2I	CCSGG	1 cut(s)	1992
AsuHPI	GGTGA	7 cut(s)	115, 464, 469, 544, 1151, 1157, 2374
AvaI	CYCGRG	2 cut(s)	356, 861
AvaII	GGWCC	2 cut(s)	319, 1994
BamHI	GGATCC	1 cut(s)	1123
BanII	GRGCYC	1 cut(s)	363
BauI	CACGAG	1 cut(s)	341
BbsI	GAAGAC	1 cut(s)	620
Bbv12I	GWGCWC	1 cut(s)	363
BbvI	GCAGC	5 cut(s)	104, 278, 739, 877, 2376
BceAI	ACGGC	1 cut(s)	359
BcgI	CGANNNNNNTGC	2 cut(s)	554, 588
BciT130I	CCWGG	1 cut(s)	2145
BciVI	GTATCC	1 cut(s)	2101
BcnI	CCSGG	1 cut(s)	1992
BcoDI	GTCTC	6 cut(s)	81, 189, 199, 959, 2234, 2425
BfaI	CTAG	7 cut(s)	816, 885, 1104, 1134, 1461, 1913, 2193
BfmI	CTRYAG	2 cut(s)	1563, 1821
BfuI	GTATCC	1 cut(s)	2101
BglII	AGATCT	1 cut(s)	133
BisI	GCNGC	8 cut(s)	118, 267, 314, 753, 891, 978, 1418, 2390
BlsI	GCNGC	8 cut(s)	119, 268, 315, 754, 892, 979, 1419, 2391
BmcAI	AGTACT	1 cut(s)	1192
Bme1390I	CCNGG	2 cut(s)	1992, 2145
Bme18I	GGWCC	2 cut(s)	319, 1994
BmeT110I	CYCGRG	2 cut(s)	356, 861
BmgT120I	GGNCC	5 cut(s)	319, 352, 586, 917, 1994
BmiI	GGNNCC	4 cut(s)	1125, 1962, 2142, 2178
BmrFI	CCNGG	2 cut(s)	1992, 2145
BmrI	ACTGGG	2 cut(s)	1265, 1339
BmsI	GCATC	1 cut(s)	1738
BmuI	ACTGGG	2 cut(s)	1265, 1339
BpiI	GAAGAC	1 cut(s)	620
BplI	GAGNNNNNCTC	2 cut(s)	192, 224
BpmI	CTGGAG	5 cut(s)	71, 1171, 1671, 1800, 2166
Bpu10I	CCTNAGC	4 cut(s)	287, 576, 582, 972
BpuEI	CTTGAG	1 cut(s)	2363
BpuMI	CCSGG	1 cut(s)	1992
BsaAI	YACGTR	1 cut(s)	29
BsaBI	GATNNNNATC	2 cut(s)	37, 162
BsaHI	GRCGYC	2 cut(s)	402, 513
BsaI	GGTCTC	2 cut(s)	81, 959
BsaJI	CCNNGG	6 cut(s)	348, 487, 508, 960, 2307, 2334
BsaWI	WCCGGW	1 cut(s)	1798
BsaXI	ACNNNNNCTCC	6 cut(s)	410, 440, 464, 494, 2139, 2169
Bsc4I	CCNNNNNNNGG	4 cut(s)	316, 577, 762, 1256
Bse1I	ACTGG	7 cut(s)	538, 649, 1188, 1260, 1345, 1654, 1783
Bse3DI	GCAATG	2 cut(s)	276, 944
Bse8I	GATNNNNATC	2 cut(s)	37, 162
BseAI	TCCGGA	1 cut(s)	1798
BseBI	CCWGG	1 cut(s)	2145
BseDI	CCNNGG	6 cut(s)	348, 487, 508, 960, 2307, 2334
BseGI	GGATG	5 cut(s)	429, 435, 1807, 2059, 2134
BseJI	GATNNNNATC	2 cut(s)	37, 162
BseLI	CCNNNNNNNGG	4 cut(s)	316, 577, 762, 1256
BseMI	GCAATG	2 cut(s)	276, 944
BseMII	CTCAG	6 cut(s)	278, 590, 596, 1334, 1457, 1901
BseNI	ACTGG	7 cut(s)	538, 649, 1188, 1260, 1345, 1654, 1783
BseRI	GAGGAG	4 cut(s)	446, 459, 472, 497
BseXI	GCAGC	5 cut(s)	104, 278, 739, 877, 2376
Bsh1236I	CGCG	3 cut(s)	333, 417, 501
Bsh1285I	CGRYCG	3 cut(s)	41, 415, 421
BshFI	GGCC	4 cut(s)	353, 587, 668, 919
BsiEI	CGRYCG	3 cut(s)	41, 415, 421
BsiHKAI	GWGCWC	1 cut(s)	363
BsiHKCI	CYCGRG	2 cut(s)	356, 861
BsiSI	CCGG	4 cut(s)	317, 597, 1799, 1992
BsiWI	CGTACG	1 cut(s)	389
BslFI	GGGAC	1 cut(s)	500
BslI	CCNNNNNNNGG	4 cut(s)	316, 577, 762, 1256
BsmAI	GTCTC	6 cut(s)	81, 189, 199, 959, 2234, 2425
BsmFI	GGGAC	1 cut(s)	500
BsnI	GGCC	4 cut(s)	353, 587, 668, 919
Bso31I	GGTCTC	2 cut(s)	81, 959
BsoBI	CYCGRG	2 cut(s)	356, 861
Bsp1286I	GDGCHC	1 cut(s)	363
Bsp13I	TCCGGA	1 cut(s)	1798
Bsp19I	CCATGG	1 cut(s)	960
Bsp68I	TCGCGA	1 cut(s)	417
BspANI	GGCC	4 cut(s)	353, 587, 668, 919
BspCNI	CTCAG	6 cut(s)	279, 589, 595, 1333, 1456, 1900
BspEI	TCCGGA	1 cut(s)	1798
BspFNI	CGCG	3 cut(s)	333, 417, 501
BspHI	TCATGA	3 cut(s)	1573, 1702, 2236
BspLI	GGNNCC	4 cut(s)	1125, 1962, 2142, 2178
BspPI	GGATC	3 cut(s)	1118, 1131, 1499
BspTNI	GGTCTC	2 cut(s)	81, 959
BsrBI	CCGCTC	5 cut(s)	324, 763, 1417, 1784, 2377
BsrDI	GCAATG	2 cut(s)	276, 944
BsrI	ACTGG	7 cut(s)	538, 649, 1188, 1260, 1345, 1654, 1783
BssECI	CCNNGG	6 cut(s)	348, 487, 508, 960, 2307, 2334
BssNI	GRCGYC	2 cut(s)	402, 513
BssSI	CACGAG	1 cut(s)	341
BssT1I	CCWWGG	4 cut(s)	348, 960, 2307, 2334
Bst2BI	CACGAG	1 cut(s)	341
Bst2UI	CCWGG	1 cut(s)	2145
Bst4CI	ACNGT	4 cut(s)	63, 389, 422, 556
Bst6I	CTCTTC	4 cut(s)	187, 221, 1844, 2001
BstACI	GRCGYC	2 cut(s)	402, 513
BstBAI	YACGTR	1 cut(s)	29
BstC8I	GCNNGC	2 cut(s)	1247, 2394
BstDEI	CTNAG	8 cut(s)	287, 576, 582, 840, 972, 1320, 1443, 1887
BstDSI	CCRYGG	1 cut(s)	960
BstF5I	GGATG	5 cut(s)	429, 435, 1807, 2059, 2134
BstFNI	CGCG	3 cut(s)	333, 417, 501
BstHHI	GCGC	3 cut(s)	335, 549, 563
BstMAI	GTCTC	6 cut(s)	81, 189, 199, 959, 2234, 2425
BstMCI	CGRYCG	3 cut(s)	41, 415, 421
BstMWI	GCNNNNNNNGC	6 cut(s)	330, 423, 498, 899, 977, 2389
BstNI	CCWGG	1 cut(s)	2145
BstNSI	RCATGY	3 cut(s)	547, 1249, 2396
BstSCI	CCNGG	2 cut(s)	1990, 2143
BstSFI	CTRYAG	2 cut(s)	1563, 1821
BstUI	CGCG	3 cut(s)	333, 417, 501
BstV1I	GCAGC	5 cut(s)	104, 278, 739, 877, 2376
BstV2I	GAAGAC	1 cut(s)	620
BstX2I	RGATCY	3 cut(s)	133, 1123, 1504
BstYI	RGATCY	3 cut(s)	133, 1123, 1504
BsuI	GTATCC	1 cut(s)	2101
BsuRI	GGCC	4 cut(s)	353, 587, 668, 919
BtgI	CCRYGG	1 cut(s)	960
BtsCI	GGATG	5 cut(s)	429, 435, 1807, 2059, 2134
BtsI	GCAGTG	1 cut(s)	1023
BtsIMutI	CAGTG	6 cut(s)	1023, 1253, 1647, 1715, 1776, 1980
BtuMI	TCGCGA	1 cut(s)	417
Cac8I	GCNNGC	2 cut(s)	1247, 2394
CaiI	CAGNNNCTG	1 cut(s)	2213
CciI	TCATGA	3 cut(s)	1573, 1702, 2236
CfoI	GCGC	3 cut(s)	335, 549, 563
Cfr13I	GGNCC	5 cut(s)	319, 352, 586, 917, 1994
CpoI	CGGWCCG	1 cut(s)	319
CseI	GACGC	2 cut(s)	391, 502
Csp6I	GTAC	7 cut(s)	59, 293, 390, 541, 1191, 1379, 2162
CspI	CGGWCCG	1 cut(s)	319
CviQI	GTAC	7 cut(s)	59, 293, 390, 541, 1191, 1379, 2162
DdeI	CTNAG	8 cut(s)	287, 576, 582, 840, 972, 1320, 1443, 1887
DraI	TTTAAA	1 cut(s)	1743
Eam1104I	CTCTTC	4 cut(s)	187, 221, 1844, 2001
EarI	CTCTTC	4 cut(s)	187, 221, 1844, 2001
EciI	GGCGGA	2 cut(s)	361, 524
Ecl136II	GAGCTC	1 cut(s)	361
Eco130I	CCWWGG	4 cut(s)	348, 960, 2307, 2334
Eco147I	AGGCCT	1 cut(s)	668
Eco24I	GRGCYC	1 cut(s)	363
Eco31I	GGTCTC	2 cut(s)	81, 959
Eco47I	GGWCC	2 cut(s)	319, 1994
Eco53kI	GAGCTC	1 cut(s)	361
Eco57I	CTGAAG	2 cut(s)	1739, 1971
Eco88I	CYCGRG	2 cut(s)	356, 861
EcoICRI	GAGCTC	1 cut(s)	361
EcoO109I	RGGNCCY	2 cut(s)	352, 586
EcoRI	GAATTC	1 cut(s)	1666
EcoRII	CCWGG	1 cut(s)	2143
EcoT14I	CCWWGG	4 cut(s)	348, 960, 2307, 2334
EcoT22I	ATGCAT	1 cut(s)	2262
EcoT38I	GRGCYC	1 cut(s)	363
ErhI	CCWWGG	4 cut(s)	348, 960, 2307, 2334
FaqI	GGGAC	1 cut(s)	500
FauI	CCCGC	2 cut(s)	318, 338
FauNDI	CATATG	1 cut(s)	787
Fnu4HI	GCNGC	8 cut(s)	118, 267, 314, 753, 891, 978, 1418, 2390
FokI	GGATG	5 cut(s)	416, 422, 1814, 2066, 2141
FriOI	GRGCYC	1 cut(s)	363
Fsp4HI	GCNGC	8 cut(s)	118, 267, 314, 753, 891, 978, 1418, 2390
FspBI	CTAG	7 cut(s)	816, 885, 1104, 1134, 1461, 1913, 2193
GlaI	GCGC	3 cut(s)	334, 548, 562
GluI	GCNGC	8 cut(s)	118, 267, 314, 753, 891, 978, 1418, 2390
GsuI	CTGGAG	5 cut(s)	71, 1171, 1671, 1800, 2166
HaeIII	GGCC	4 cut(s)	353, 587, 668, 919
HapII	CCGG	4 cut(s)	317, 597, 1799, 1992
HgaI	GACGC	2 cut(s)	391, 502
HhaI	GCGC	3 cut(s)	335, 549, 563
Hin1I	GRCGYC	2 cut(s)	402, 513
Hin6I	GCGC	3 cut(s)	333, 547, 561
HinP1I	GCGC	3 cut(s)	333, 547, 561
HincII	GTYRAC	2 cut(s)	1270, 1483
HindII	GTYRAC	2 cut(s)	1270, 1483
HpaI	GTTAAC	2 cut(s)	1270, 1483
HpaII	CCGG	4 cut(s)	317, 597, 1799, 1992
HphI	GGTGA	7 cut(s)	115, 464, 469, 544, 1151, 1157, 2374
Hpy166II	GTNNAC	2 cut(s)	1270, 1483
Hpy188I	TCNGA	9 cut(s)	163, 412, 712, 1323, 1446, 1867, 1951, 2320, 2418
Hpy8I	GTNNAC	2 cut(s)	1270, 1483
Hpy99I	CGWCG	2 cut(s)	67, 380
HpyAV	CCTTC	8 cut(s)	459, 760, 813, 861, 1107, 1136, 1518, 2404
HpyCH4III	ACNGT	4 cut(s)	63, 389, 422, 556
HpyCH4IV	ACGT	1 cut(s)	28
HpyF10VI	GCNNNNNNNGC	6 cut(s)	330, 423, 498, 899, 977, 2389
HpyF3I	CTNAG	8 cut(s)	287, 576, 582, 840, 972, 1320, 1443, 1887
HpySE526I	ACGT	1 cut(s)	28
Hsp92I	GRCGYC	2 cut(s)	402, 513
HspAI	GCGC	3 cut(s)	333, 547, 561
Kpn2I	TCCGGA	1 cut(s)	1798
KspAI	GTTAAC	2 cut(s)	1270, 1483
LmnI	GCTCC	6 cut(s)	431, 1345, 1414, 1652, 1771, 1781
Lsp1109I	GCAGC	5 cut(s)	104, 278, 739, 877, 2376
LweI	GCATC	1 cut(s)	1738
MaeI	CTAG	7 cut(s)	816, 885, 1104, 1134, 1461, 1913, 2193
MaeII	ACGT	1 cut(s)	28
MaeIII	GTNAC	8 cut(s)	22, 343, 717, 1181, 1302, 1726, 1816, 2362
MbiI	CCGCTC	5 cut(s)	324, 763, 1417, 1784, 2377
MfeI	CAATTG	1 cut(s)	1497
MflI	RGATCY	3 cut(s)	133, 1123, 1504
MhlI	GDGCHC	1 cut(s)	363
MlyI	GAGTC	3 cut(s)	201, 853, 994
MmeI	TCCRAC	3 cut(s)	201, 260, 1392
Mph1103I	ATGCAT	1 cut(s)	2262
MroI	TCCGGA	1 cut(s)	1798
MspA1I	CMGCKG	1 cut(s)	1673
MspI	CCGG	4 cut(s)	317, 597, 1799, 1992
MspR9I	CCNGG	2 cut(s)	1992, 2145
MunI	CAATTG	1 cut(s)	1497
MvaI	CCWGG	1 cut(s)	2145
MvnI	CGCG	3 cut(s)	333, 417, 501
MwoI	GCNNNNNNNGC	6 cut(s)	330, 423, 498, 899, 977, 2389
NciI	CCSGG	1 cut(s)	1992
NcoI	CCATGG	1 cut(s)	960
NdeI	CATATG	1 cut(s)	787
NlaIV	GGNNCC	4 cut(s)	1125, 1962, 2142, 2178
NmeAIII	GCCGAG	3 cut(s)	342, 468, 489
NmuCI	GTSAC	5 cut(s)	22, 343, 1302, 1726, 2362
NruI	TCGCGA	1 cut(s)	417
NsiI	ATGCAT	1 cut(s)	2262
NspI	RCATGY	3 cut(s)	547, 1249, 2396
PaeI	GCATGC	2 cut(s)	1249, 2396
PaeR7I	CTCGAG	2 cut(s)	356, 861
PagI	TCATGA	3 cut(s)	1573, 1702, 2236
PceI	AGGCCT	1 cut(s)	668
PcsI	WCGNNNNNNNCGW	2 cut(s)	34, 288
PfeI	GAWTC	8 cut(s)	144, 158, 1676, 1795, 1946, 2096, 2189, 2321
Pfl23II	CGTACG	1 cut(s)	389
PkrI	GCNGC	8 cut(s)	119, 268, 315, 754, 892, 979, 1419, 2391
Ple19I	CGATCG	2 cut(s)	41, 415
PleI	GAGTC	3 cut(s)	201, 853, 994
PpsI	GAGTC	3 cut(s)	201, 853, 994
Ppu21I	YACGTR	1 cut(s)	29
PsiI	TTATAA	1 cut(s)	1038
Psp124BI	GAGCTC	1 cut(s)	363
Psp6I	CCWGG	1 cut(s)	2143
PspGI	CCWGG	1 cut(s)	2143
PspLI	CGTACG	1 cut(s)	389
PspN4I	GGNNCC	4 cut(s)	1125, 1962, 2142, 2178
PspPI	GGNCC	5 cut(s)	319, 352, 586, 917, 1994
PspXI	VCTCGAGB	2 cut(s)	356, 861
PstNI	CAGNNNCTG	1 cut(s)	2213
PsuI	RGATCY	3 cut(s)	133, 1123, 1504
PvuI	CGATCG	2 cut(s)	41, 415
PvuII	CAGCTG	1 cut(s)	1673
RruI	TCGCGA	1 cut(s)	417
RsaI	GTAC	7 cut(s)	60, 294, 391, 542, 1192, 1380, 2163
RsaNI	GTAC	7 cut(s)	59, 293, 390, 541, 1191, 1379, 2162
Rsr2I	CGGWCCG	1 cut(s)	319
RsrII	CGGWCCG	1 cut(s)	319
SacI	GAGCTC	1 cut(s)	363
SatI	GCNGC	8 cut(s)	118, 267, 314, 753, 891, 978, 1418, 2390
Sau96I	GGNCC	5 cut(s)	319, 352, 586, 917, 1994
ScaI	AGTACT	1 cut(s)	1192
SchI	GAGTC	3 cut(s)	201, 853, 994
ScrFI	CCNGG	2 cut(s)	1992, 2145
SduI	GDGCHC	1 cut(s)	363
SfaNI	GCATC	1 cut(s)	1738
SfcI	CTRYAG	2 cut(s)	1563, 1821
Sfr274I	CTCGAG	2 cut(s)	356, 861
SinI	GGWCC	2 cut(s)	319, 1994
SlaI	CTCGAG	2 cut(s)	356, 861
SmlI	CTYRAG	3 cut(s)	356, 861, 2378
SmoI	CTYRAG	3 cut(s)	356, 861, 2378
SphI	GCATGC	2 cut(s)	1249, 2396
SseBI	AGGCCT	1 cut(s)	668
SspI	AATATT	1 cut(s)	216
SspMI	CTAG	7 cut(s)	816, 885, 1104, 1134, 1461, 1913, 2193
SstI	GAGCTC	1 cut(s)	363
StuI	AGGCCT	1 cut(s)	668
StyD4I	CCNGG	2 cut(s)	1990, 2143
StyI	CCWWGG	4 cut(s)	348, 960, 2307, 2334
TaaI	ACNGT	4 cut(s)	63, 389, 422, 556
TaiI	ACGT	1 cut(s)	31
TaqII	GACCGA	2 cut(s)	105, 941
TatI	WGTACW	4 cut(s)	540, 1190, 1378, 2161
TauI	GCSGC	3 cut(s)	316, 980, 1420
TfiI	GAWTC	8 cut(s)	144, 158, 1676, 1795, 1946, 2096, 2189, 2321
TscAI	CASTG	6 cut(s)	1023, 1260, 1654, 1722, 1783, 1987
TseFI	GTSAC	5 cut(s)	22, 343, 1302, 1726, 2362
TseI	GCWGC	5 cut(s)	117, 266, 752, 890, 2389
Tsp45I	GTSAC	5 cut(s)	22, 343, 1302, 1726, 2362
TspGWI	ACGGA	1 cut(s)	2153
TspRI	CASTG	6 cut(s)	1023, 1260, 1654, 1722, 1783, 1987
VpaK11BI	GGWCC	2 cut(s)	319, 1994
XapI	RAATTY	5 cut(s)	908, 1666, 1698, 1827, 2291
XceI	RCATGY	3 cut(s)	547, 1249, 2396
XhoI	CTCGAG	2 cut(s)	356, 861
XspI	CTAG	7 cut(s)	816, 885, 1104, 1134, 1461, 1913, 2193
ZrmI	AGTACT	1 cut(s)	1192
Zsp2I	ATGCAT	1 cut(s)	2262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.