Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002965

Physical Location & Seq

Genomic Coordinates Forward (+)

22676048 .. 22680238

Gene Structure 4191 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00018520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGGGCTTCTTCGACCTGAGCATACCCTACACCGACCTCCCGCCGCCGGACCGCTCAACCCGCGCAAAGGTCGTGACCAAGGCCCTCGAACTCGGCTACTCCGGCGTCGCCTACAACCGTATGATCAAGGGCGTCATGTCCGATCGCGACCGTTGCTCCATCCCCCTCCTCACTCTCCCTTCTCTCCTCAAACACTCTCCTCACCTCACCTCCTCCGTCGGCTTCCACCGCGACCTGCTCGGCGTCCCACGCGCCACCCCTTTCCGCCAGTACACGCGCCTCACCGTCTGCGCCGAAACCCCTGCCCAGGCTCAGGCCCTCAATTCCGGCAACCCCATTTTGAAGACCTACGATTTGGTGGCTGTCAAGCCCATGAACCAGTCCGCTTTCGATCAGGCCTGTGAGAAATTGGAGGTAGATATAATTGCGATTGATTTTTCGGAGAAGTTACCATTTCGATTGAAGCAGCCTCTGGTTAAAGCTGCCATTGAGCGGAAGGTGTATTTTGAGATCACATATGCAGGGCTTATTGCCGATGTTCAAACTAGAAGGCAAATTATAACCAATGCTAAGTTATTGGTAGATTGGACTCGAGGAAGGAATATAATTATCTCTAGTGCTGCCCCAACTGCGAATGAATTTAGAGGGCCATATGATGTTGCAAACGTAATGTCATTGCTCGGTCTCTCTATGGAACGAGCTAAGGCGGCTATTTCAAGAAATTGTAGGACTCTTATATCTAATGCAGTGAGAAAAAAACACTATTATAAGGAAGCCATTAGAGTTGAAGTACTACCATCAGGTCAACAAAGTGAGGGGAACAAACCTTCTTCTAGTGACTCTTTTAATTGGGATCCCATCTCTAGTGGTGAAGGTGATTTGCTTTTAGATGATTTGGCAAAGGCTTTCAGTAACTCCAGTACTAAAGCAACCAAAATGGTCAAAGCCATTGATTTTGCTTCGGTTATTGACAGCATGCCATCACTTGGATTTCAAGTTAATGATCTTATATCTGGAACTAATGTGGTTGTGTCACAACCATTGGCTACTCAGAAAAACATCGTTTCTGCTCCCCAGTTAAATGTGCAATCAGTTGCAACTGATGGAGTACAAGAACAATCTGTTGTATGTGATACTATGTTGGAGCGGCAAAGGTTCAAAAGCAAAAATCCTCAGAAATTATATCCATCTAGTGATACTACCAAAGCTGTTAACAATGTTATTTCAATTGAAGATCCTTCGATAACCACTAGAGCAGAACCAAATAGTCCAGATGAAACAGATGGGATTGCCACAGATATTCATGATGTGCAAGCACAGAAGTCTGCGATTGCAAATGCTGTTAATGATGTTATGGAAATTGAAGTTCCTACAACCACTGGAGCAGAACCAATGAATTCAGCTGAATCAATGGGGATTACAAAAGAAATTCATGATGTGCAATCACTGAAGTCTGTGACTGCCAAAACTTTTAAAGATGCTATGGAAATTGAAGCTTCTACAACCACTGGAGCGGAACCAATGAATTCAGCTGAATCAATGGGGATTACAAAAGAAATTCATGATGTGCAATCACTGAAGTCTGTGACTGCCGTGACTGCCAAAACTTTTAAAGATGCTATGGAAATTGAAGCTCCTACAACCACTGGAGCGGAAACAAAGAATCCGGATGGAATAGATGGGGTTACTACAGAAATTCTTAATGTTCTTTCACAGAAGCGTATGGCTAATTGCGAATTGAATGTTGTGCCATCTCAGGTTAATTTAACATATCATGCACTAGGCATAGGGTTGAGTGTTGCTTGTAATCCTGATTCTGAAGTTCAAGTTCCCACTAATTATCAGGACAGTGATATTCCCGGTCCTCATAATGAAGAGGCTGATAGTATTAAAAATAATGATATACAAAGTGATTTAGTGGATGAAGTTCTAACAGCATTGGATAAAAGTATTTCGGAAATGGATGAATTGACGGAACCTGGAGATGATGTAGTTGTACTTGCAAATCAGGTTCCTGTTCTGGATTCTAGTGATGAGATGACAGCAACTGATGATTATTCAGTTGCAAATCATGAGACAGCAGAGGTAATAATGGATGAGCAAGAACATGGGAAAGCTGATGTTGAATTGAGCTATCCAGCCTTGGTTCAGTCTGAATCAGGGAAATCCAAGGCAAAAAGGAAGAAACCTCATCAGTTGACATTTCTTCCTCTCAAGCGATTGCTGCATGCTACACCTTTTAAGAAGGCTCGGAAAAGTAAAAGGAGACATAAGATGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0099116 GO:1901360 GO:1901363 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

CCT RNase_P_p30

Protein Analysis

760

Amino Acids

82.89

Weight (kDa)

5.36

Isoelectric Point (pI)

43.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_P_p30	PF01876	5 - 241	9e-51	RNase P subunit p30

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59980 AT5G59980 AT5G59980 AT5G59980
fragaria_vesca	FvH4_3g34550 FvH4_3g34550
malus_domestica	MD11G1117900.v1.1
prunus_persica	Prupe.6G088000_v2.0.a1 Prupe.6G088000_v2.0.a1
pyrus_communis	pycom03g08460 pycom11g09880
rosa_chinensis	RchiOBHm_Chr4g0385531 RchiOBHm_Chr5g0062191
rosa_laevigata	RLG00000010219 RLG00000035541
rosa_multiflora	Rmu_co8004892.1_g000001 Rmu_sc0014282.1_g000010 Rmu_sc0018073.1_g000001 Rmu_ssc0000409.1_g000011
rosa_roxburghii	Rroxscaffold_1G00018520 Rroxscaffold_5G00333410
rosa_rugosa	Rorug05G0347200 Rorug07G0171200 Rorug07G0171200 Rorug07G0171300
rosa_samantha	Rh4AG006400 Rh4DG005200 Rh5AG407700 Rh5BG421400 Rh5CG445400 Rh5DG436400 Rh7AG313200 Rh7BG303900 Rh7CG331600 Rh7DG312000
rosa_wichuraiana	Rw5G038420 Rw7G026520 Rw7G028230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	560, 768
Acc36I	ACCTGC	1 cut(s)	243
AccB7I	CCANNNNNTGG	1 cut(s)	986
AccBSI	CCGCTC	5 cut(s)	54, 493, 1147, 1514, 1652
AccII	CGCG	5 cut(s)	63, 147, 231, 252, 277
AccIII	TCCGGA	1 cut(s)	1666
AclWI	GGATC	3 cut(s)	848, 861, 1229
AcsI	RAATTY	6 cut(s)	638, 1396, 1428, 1525, 1557, 1695
AcuI	CTGAAG	3 cut(s)	1469, 1598, 1839
AcyI	GRCGYC	3 cut(s)	105, 132, 243
AfaI	GTAC	5 cut(s)	272, 792, 922, 1110, 1998
AfiI	CCNNNNNNNGG	6 cut(s)	46, 67, 307, 313, 492, 986
AjnI	CCWGG	2 cut(s)	306, 1978
AluBI	AGCT	9 cut(s)	482, 701, 1208, 1403, 1496, 1532, 1634, 2117, 2133
AluI	AGCT	9 cut(s)	482, 701, 1208, 1403, 1496, 1532, 1634, 2117, 2133
Alw26I	GTCTC	3 cut(s)	689, 2069, 2260
AlwI	GGATC	3 cut(s)	848, 861, 1229
AlwNI	CAGNNNCTG	2 cut(s)	472, 2048
Ama87I	CYCGRG	1 cut(s)	591
Aor13HI	TCCGGA	1 cut(s)	1666
AoxI	GGCC	4 cut(s)	81, 315, 396, 647
ApeKI	GCWGC	4 cut(s)	466, 482, 620, 2224
ApoI	RAATTY	6 cut(s)	638, 1396, 1428, 1525, 1557, 1695
ArsI	GACNNNNNNTTYG	4 cut(s)	337, 369, 656, 688
AspLEI	GCGC	4 cut(s)	65, 254, 279, 293
AspS9I	GGNCC	5 cut(s)	49, 82, 316, 647, 1862
AsuC2I	CCSGG	1 cut(s)	1860
AsuHPI	GGTGA	5 cut(s)	194, 199, 274, 881, 887
AvaI	CYCGRG	1 cut(s)	591
AvaII	GGWCC	2 cut(s)	49, 1862
BamHI	GGATCC	1 cut(s)	853
BbsI	GAAGAC	1 cut(s)	350
BbvI	GCAGC	4 cut(s)	469, 478, 607, 2211
BceAI	ACGGC	1 cut(s)	1577
BcgI	CGANNNNNNTGC	2 cut(s)	284, 318
BciT130I	CCWGG	2 cut(s)	308, 1980
BclI	TGATCA	1 cut(s)	123
BcnI	CCSGG	1 cut(s)	1860
BcoDI	GTCTC	3 cut(s)	689, 2069, 2260
BfaI	CTAG	8 cut(s)	546, 615, 834, 864, 1191, 1251, 1781, 2028
BfmI	CTRYAG	1 cut(s)	1689
BfuAI	ACCTGC	1 cut(s)	243
BisI	GCNGC	7 cut(s)	44, 467, 483, 621, 708, 1148, 2225
BlsI	GCNGC	7 cut(s)	45, 468, 484, 622, 709, 1149, 2226
BmcAI	AGTACT	2 cut(s)	792, 922
Bme1390I	CCNGG	3 cut(s)	308, 1860, 1980
Bme18I	GGWCC	2 cut(s)	49, 1862
BmeT110I	CYCGRG	1 cut(s)	591
BmgT120I	GGNCC	5 cut(s)	49, 82, 316, 647, 1862
BmiI	GGNNCC	4 cut(s)	855, 1518, 1977, 2013
BmrFI	CCNGG	3 cut(s)	308, 1860, 1980
BmrI	ACTGGG	1 cut(s)	1069
BmsI	GCATC	2 cut(s)	1468, 1606
BmuI	ACTGGG	1 cut(s)	1069
BpiI	GAAGAC	1 cut(s)	350
BpmI	CTGGAG	5 cut(s)	901, 1401, 1530, 1668, 2001
Bpu10I	CCTNAGC	3 cut(s)	17, 312, 702
BpuEI	CTTGAG	1 cut(s)	2198
BpuMI	CCSGG	1 cut(s)	1860
BsaHI	GRCGYC	3 cut(s)	105, 132, 243
BsaI	GGTCTC	1 cut(s)	689
BsaJI	CCNNGG	4 cut(s)	78, 306, 2142, 2169
BsaWI	WCCGGW	1 cut(s)	1666
BsaXI	ACNNNNNCTCC	6 cut(s)	140, 170, 194, 224, 1974, 2004
Bsc4I	CCNNNNNNNGG	6 cut(s)	46, 67, 307, 313, 492, 986
Bse1I	ACTGG	7 cut(s)	268, 379, 918, 1075, 1384, 1513, 1651
Bse3DI	GCAATG	1 cut(s)	674
BseAI	TCCGGA	1 cut(s)	1666
BseBI	CCWGG	2 cut(s)	308, 1980
BseDI	CCNNGG	4 cut(s)	78, 306, 2142, 2169
BseGI	GGATG	5 cut(s)	159, 1675, 1927, 1969, 2101
BseLI	CCNNNNNNNGG	6 cut(s)	46, 67, 307, 313, 492, 986
BseMI	GCAATG	1 cut(s)	674
BseMII	CTCAG	5 cut(s)	8, 326, 1064, 1187, 1769
BseNI	ACTGG	7 cut(s)	268, 379, 918, 1075, 1384, 1513, 1651
BseRI	GAGGAG	4 cut(s)	158, 176, 189, 202
BseXI	GCAGC	4 cut(s)	469, 478, 607, 2211
Bsh1236I	CGCG	5 cut(s)	63, 147, 231, 252, 277
Bsh1285I	CGRYCG	2 cut(s)	145, 151
BshFI	GGCC	4 cut(s)	83, 317, 398, 649
BsiEI	CGRYCG	2 cut(s)	145, 151
BsiHKCI	CYCGRG	1 cut(s)	591
BsiSI	CCGG	5 cut(s)	47, 102, 327, 1667, 1860
BslFI	GGGAC	1 cut(s)	230
BslI	CCNNNNNNNGG	6 cut(s)	46, 67, 307, 313, 492, 986
BsmAI	GTCTC	3 cut(s)	689, 2069, 2260
BsmFI	GGGAC	1 cut(s)	230
BsnI	GGCC	4 cut(s)	83, 317, 398, 649
Bso31I	GGTCTC	1 cut(s)	689
BsoBI	CYCGRG	1 cut(s)	591
Bsp13I	TCCGGA	1 cut(s)	1666
Bsp143I	GATC	7 cut(s)	123, 142, 391, 510, 853, 1003, 1234
Bsp68I	TCGCGA	1 cut(s)	147
BspANI	GGCC	4 cut(s)	83, 317, 398, 649
BspCNI	CTCAG	5 cut(s)	9, 325, 1063, 1186, 1768
BspEI	TCCGGA	1 cut(s)	1666
BspFNI	CGCG	5 cut(s)	63, 147, 231, 252, 277
BspHI	TCATGA	4 cut(s)	1303, 1432, 1561, 2071
BspLI	GGNNCC	4 cut(s)	855, 1518, 1977, 2013
BspMI	ACCTGC	1 cut(s)	243
BspPI	GGATC	3 cut(s)	848, 861, 1229
BspTNI	GGTCTC	1 cut(s)	689
BsrBI	CCGCTC	5 cut(s)	54, 493, 1147, 1514, 1652
BsrDI	GCAATG	1 cut(s)	674
BsrI	ACTGG	7 cut(s)	268, 379, 918, 1075, 1384, 1513, 1651
BssECI	CCNNGG	4 cut(s)	78, 306, 2142, 2169
BssMI	GATC	7 cut(s)	123, 142, 391, 510, 853, 1003, 1234
BssNI	GRCGYC	3 cut(s)	105, 132, 243
BssT1I	CCWWGG	3 cut(s)	78, 2142, 2169
Bst2UI	CCWGG	2 cut(s)	308, 1980
Bst4CI	ACNGT	4 cut(s)	119, 152, 286, 1850
Bst6I	CTCTTC	1 cut(s)	1869
BstACI	GRCGYC	3 cut(s)	105, 132, 243
BstC8I	GCNNGC	3 cut(s)	977, 1314, 2229
BstDEI	CTNAG	7 cut(s)	17, 312, 570, 702, 1050, 1173, 1755
BstF5I	GGATG	5 cut(s)	159, 1675, 1927, 1969, 2101
BstFNI	CGCG	5 cut(s)	63, 147, 231, 252, 277
BstHHI	GCGC	4 cut(s)	65, 254, 279, 293
BstKTI	GATC	7 cut(s)	126, 145, 394, 513, 856, 1006, 1237
BstMAI	GTCTC	3 cut(s)	689, 2069, 2260
BstMBI	GATC	7 cut(s)	123, 142, 391, 510, 853, 1003, 1234
BstMCI	CGRYCG	2 cut(s)	145, 151
BstMWI	GCNNNNNNNGC	9 cut(s)	60, 102, 153, 228, 249, 629, 707, 1598, 2224
BstNI	CCWGG	2 cut(s)	308, 1980
BstNSI	RCATGY	2 cut(s)	979, 2231
BstSCI	CCNGG	3 cut(s)	306, 1858, 1978
BstSFI	CTRYAG	1 cut(s)	1689
BstUI	CGCG	5 cut(s)	63, 147, 231, 252, 277
BstV1I	GCAGC	4 cut(s)	469, 478, 607, 2211
BstV2I	GAAGAC	1 cut(s)	350
BstX2I	RGATCY	2 cut(s)	853, 1234
BstYI	RGATCY	2 cut(s)	853, 1234
BsuRI	GGCC	4 cut(s)	83, 317, 398, 649
BtsCI	GGATG	5 cut(s)	159, 1675, 1927, 1969, 2101
BtsI	GCAGTG	1 cut(s)	753
BtsIMutI	CAGTG	7 cut(s)	753, 1377, 1445, 1506, 1574, 1644, 1855
BtuMI	TCGCGA	1 cut(s)	147
BveI	ACCTGC	1 cut(s)	243
Cac8I	GCNNGC	3 cut(s)	977, 1314, 2229
CaiI	CAGNNNCTG	2 cut(s)	472, 2048
CciI	TCATGA	4 cut(s)	1303, 1432, 1561, 2071
CfoI	GCGC	4 cut(s)	65, 254, 279, 293
Cfr13I	GGNCC	5 cut(s)	49, 82, 316, 647, 1862
CpoI	CGGWCCG	1 cut(s)	49
CseI	GACGC	3 cut(s)	94, 121, 232
Csp6I	GTAC	5 cut(s)	271, 791, 921, 1109, 1997
CspI	CGGWCCG	1 cut(s)	49
CviQI	GTAC	5 cut(s)	271, 791, 921, 1109, 1997
DdeI	CTNAG	7 cut(s)	17, 312, 570, 702, 1050, 1173, 1755
DpnI	GATC	7 cut(s)	125, 144, 393, 512, 855, 1005, 1236
DpnII	GATC	7 cut(s)	123, 142, 391, 510, 853, 1003, 1234
DraI	TTTAAA	2 cut(s)	1474, 1612
Eam1104I	CTCTTC	1 cut(s)	1869
EarI	CTCTTC	1 cut(s)	1869
EciI	GGCGGA	1 cut(s)	254
Eco130I	CCWWGG	3 cut(s)	78, 2142, 2169
Eco147I	AGGCCT	1 cut(s)	398
Eco31I	GGTCTC	1 cut(s)	689
Eco47I	GGWCC	2 cut(s)	49, 1862
Eco57I	CTGAAG	3 cut(s)	1469, 1598, 1839
Eco88I	CYCGRG	1 cut(s)	591
EcoO109I	RGGNCCY	2 cut(s)	82, 316
EcoRI	GAATTC	2 cut(s)	1396, 1525
EcoRII	CCWGG	2 cut(s)	306, 1978
EcoT14I	CCWWGG	3 cut(s)	78, 2142, 2169
ErhI	CCWWGG	3 cut(s)	78, 2142, 2169
FaqI	GGGAC	1 cut(s)	230
FauI	CCCGC	2 cut(s)	48, 68
FauNDI	CATATG	2 cut(s)	517, 652
FbaI	TGATCA	1 cut(s)	123
Fnu4HI	GCNGC	7 cut(s)	44, 467, 483, 621, 708, 1148, 2225
FokI	GGATG	5 cut(s)	146, 1682, 1934, 1976, 2108
Fsp4HI	GCNGC	7 cut(s)	44, 467, 483, 621, 708, 1148, 2225
FspBI	CTAG	8 cut(s)	546, 615, 834, 864, 1191, 1251, 1781, 2028
GlaI	GCGC	4 cut(s)	64, 253, 278, 292
GluI	GCNGC	7 cut(s)	44, 467, 483, 621, 708, 1148, 2225
GsuI	CTGGAG	5 cut(s)	901, 1401, 1530, 1668, 2001
HaeIII	GGCC	4 cut(s)	83, 317, 398, 649
HapII	CCGG	5 cut(s)	47, 102, 327, 1667, 1860
HgaI	GACGC	3 cut(s)	94, 121, 232
HhaI	GCGC	4 cut(s)	65, 254, 279, 293
Hin1I	GRCGYC	3 cut(s)	105, 132, 243
Hin6I	GCGC	4 cut(s)	63, 252, 277, 291
HinP1I	GCGC	4 cut(s)	63, 252, 277, 291
HincII	GTYRAC	3 cut(s)	806, 1213, 2199
HindII	GTYRAC	3 cut(s)	806, 1213, 2199
HindIII	AAGCTT	1 cut(s)	1494
HinfI	GANTC	9 cut(s)	589, 730, 839, 1406, 1535, 1663, 1814, 2024, 2156
HpaI	GTTAAC	1 cut(s)	1213
HpaII	CCGG	5 cut(s)	47, 102, 327, 1667, 1860
HphI	GGTGA	5 cut(s)	194, 199, 274, 881, 887
Hpy166II	GTNNAC	4 cut(s)	273, 806, 1213, 2199
Hpy188I	TCNGA	8 cut(s)	142, 442, 1053, 1176, 1819, 1957, 2155, 2253
Hpy8I	GTNNAC	4 cut(s)	273, 806, 1213, 2199
Hpy99I	CGWCG	2 cut(s)	110, 221
HpyAV	CCTTC	8 cut(s)	189, 490, 543, 591, 837, 866, 1248, 2239
HpyCH4III	ACNGT	4 cut(s)	119, 152, 286, 1850
HpyCH4IV	ACGT	1 cut(s)	666
HpyF10VI	GCNNNNNNNGC	9 cut(s)	60, 102, 153, 228, 249, 629, 707, 1598, 2224
HpyF3I	CTNAG	7 cut(s)	17, 312, 570, 702, 1050, 1173, 1755
HpySE526I	ACGT	1 cut(s)	666
Hsp92I	GRCGYC	3 cut(s)	105, 132, 243
HspAI	GCGC	4 cut(s)	63, 252, 277, 291
Kpn2I	TCCGGA	1 cut(s)	1666
Ksp22I	TGATCA	1 cut(s)	123
KspAI	GTTAAC	1 cut(s)	1213
Kzo9I	GATC	7 cut(s)	123, 142, 391, 510, 853, 1003, 1234
LmnI	GCTCC	7 cut(s)	161, 1075, 1144, 1382, 1511, 1639, 1649
Lsp1109I	GCAGC	4 cut(s)	469, 478, 607, 2211
LweI	GCATC	2 cut(s)	1468, 1606
MaeI	CTAG	8 cut(s)	546, 615, 834, 864, 1191, 1251, 1781, 2028
MaeII	ACGT	1 cut(s)	666
MaeIII	GTNAC	9 cut(s)	73, 447, 836, 911, 1032, 1456, 1585, 1594, 1684
MalI	GATC	7 cut(s)	125, 144, 393, 512, 855, 1005, 1236
MbiI	CCGCTC	5 cut(s)	54, 493, 1147, 1514, 1652
MboI	GATC	7 cut(s)	123, 142, 391, 510, 853, 1003, 1234
MboII	GAAGA	6 cut(s)	355, 822, 1244, 1886, 2194, 2198
MfeI	CAATTG	1 cut(s)	1227
MflI	RGATCY	2 cut(s)	853, 1234
MlyI	GAGTC	3 cut(s)	583, 724, 833
MmeI	TCCRAC	1 cut(s)	1122
MroI	TCCGGA	1 cut(s)	1666
MspA1I	CMGCKG	2 cut(s)	1403, 1532
MspI	CCGG	5 cut(s)	47, 102, 327, 1667, 1860
MspR9I	CCNGG	3 cut(s)	308, 1860, 1980
MunI	CAATTG	1 cut(s)	1227
MvaI	CCWGG	2 cut(s)	308, 1980
MvnI	CGCG	5 cut(s)	63, 147, 231, 252, 277
MwoI	GCNNNNNNNGC	9 cut(s)	60, 102, 153, 228, 249, 629, 707, 1598, 2224
NciI	CCSGG	1 cut(s)	1860
NdeI	CATATG	2 cut(s)	517, 652
NdeII	GATC	7 cut(s)	123, 142, 391, 510, 853, 1003, 1234
NlaIV	GGNNCC	4 cut(s)	855, 1518, 1977, 2013
NmeAIII	GCCGAG	2 cut(s)	72, 219
NmuCI	GTSAC	6 cut(s)	73, 836, 1032, 1456, 1585, 1594
NruI	TCGCGA	1 cut(s)	147
NspI	RCATGY	2 cut(s)	979, 2231
PaeI	GCATGC	2 cut(s)	979, 2231
PaeR7I	CTCGAG	1 cut(s)	591
PagI	TCATGA	4 cut(s)	1303, 1432, 1561, 2071
PceI	AGGCCT	1 cut(s)	398
PfeI	GAWTC	6 cut(s)	1406, 1535, 1663, 1814, 2024, 2156
PflMI	CCANNNNNTGG	1 cut(s)	986
PkrI	GCNGC	7 cut(s)	45, 468, 484, 622, 709, 1149, 2226
Ple19I	CGATCG	1 cut(s)	145
PleI	GAGTC	3 cut(s)	583, 724, 833
PpsI	GAGTC	3 cut(s)	583, 724, 833
PsiI	TTATAA	2 cut(s)	560, 768
Psp6I	CCWGG	2 cut(s)	306, 1978
PspGI	CCWGG	2 cut(s)	306, 1978
PspN4I	GGNNCC	4 cut(s)	855, 1518, 1977, 2013
PspPI	GGNCC	5 cut(s)	49, 82, 316, 647, 1862
PspXI	VCTCGAGB	1 cut(s)	591
PstNI	CAGNNNCTG	2 cut(s)	472, 2048
PsuI	RGATCY	2 cut(s)	853, 1234
PvuI	CGATCG	1 cut(s)	145
PvuII	CAGCTG	2 cut(s)	1403, 1532
RruI	TCGCGA	1 cut(s)	147
RsaI	GTAC	5 cut(s)	272, 792, 922, 1110, 1998
RsaNI	GTAC	5 cut(s)	271, 791, 921, 1109, 1997
Rsr2I	CGGWCCG	1 cut(s)	49
RsrII	CGGWCCG	1 cut(s)	49
SatI	GCNGC	7 cut(s)	44, 467, 483, 621, 708, 1148, 2225
Sau3AI	GATC	7 cut(s)	123, 142, 391, 510, 853, 1003, 1234
Sau96I	GGNCC	5 cut(s)	49, 82, 316, 647, 1862
ScaI	AGTACT	2 cut(s)	792, 922
SchI	GAGTC	3 cut(s)	583, 724, 833
ScrFI	CCNGG	3 cut(s)	308, 1860, 1980
SfaNI	GCATC	2 cut(s)	1468, 1606
SfcI	CTRYAG	1 cut(s)	1689
Sfr274I	CTCGAG	1 cut(s)	591
SinI	GGWCC	2 cut(s)	49, 1862
SlaI	CTCGAG	1 cut(s)	591
SmlI	CTYRAG	2 cut(s)	591, 2213
SmoI	CTYRAG	2 cut(s)	591, 2213
SphI	GCATGC	2 cut(s)	979, 2231
SseBI	AGGCCT	1 cut(s)	398
SspMI	CTAG	8 cut(s)	546, 615, 834, 864, 1191, 1251, 1781, 2028
StuI	AGGCCT	1 cut(s)	398
StyD4I	CCNGG	3 cut(s)	306, 1858, 1978
StyI	CCWWGG	3 cut(s)	78, 2142, 2169
TaaI	ACNGT	4 cut(s)	119, 152, 286, 1850
TaiI	ACGT	1 cut(s)	669
TaqI	TCGA	6 cut(s)	12, 87, 390, 457, 592, 1241
TaqII	GACCGA	1 cut(s)	671
TatI	WGTACW	5 cut(s)	270, 790, 920, 1108, 1996
TauI	GCSGC	3 cut(s)	46, 710, 1150
TfiI	GAWTC	6 cut(s)	1406, 1535, 1663, 1814, 2024, 2156
TscAI	CASTG	7 cut(s)	753, 1384, 1452, 1513, 1581, 1651, 1855
TseFI	GTSAC	6 cut(s)	73, 836, 1032, 1456, 1585, 1594
TseI	GCWGC	4 cut(s)	466, 482, 620, 2224
Tsp45I	GTSAC	6 cut(s)	73, 836, 1032, 1456, 1585, 1594
TspGWI	ACGGA	2 cut(s)	205, 1988
TspRI	CASTG	7 cut(s)	753, 1384, 1452, 1513, 1581, 1651, 1855
Van91I	CCANNNNNTGG	1 cut(s)	986
VpaK11BI	GGWCC	2 cut(s)	49, 1862
XapI	RAATTY	6 cut(s)	638, 1396, 1428, 1525, 1557, 1695
XceI	RCATGY	2 cut(s)	979, 2231
XhoI	CTCGAG	1 cut(s)	591
XspI	CTAG	8 cut(s)	546, 615, 834, 864, 1191, 1251, 1781, 2028
ZrmI	AGTACT	2 cut(s)	792, 922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.