Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0002965

Physical Location & Seq

Genomic Coordinates Forward (+)

10690389 .. 10694816

Gene Structure 4428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1117900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGCCTTCTTCGACCTCAGCATACCCTATACGGACCCCTCCCCACCGGACCGATCATCAGCAACACGTGCCAAGCTGGTGACCAAGGCCCTGGAGCTCGGCTACTCCGGAATCGCTTACAACCGCACGATGAAGGGCGTCATGTCCGATCACGACCGTTGCTCCATCCCCCTCCTCAAACTTCCTTCCCTCCTCAAGCACTCTCCTCTCCTCCACTCCTCCGTCAACTTCCACCGCGACCTCCTCGGTGTCCCCCGCTCCTCCCCTTTCCGCCAGTACACCCGCCTCACCGTCTGCGCCGAGACCCCTGCCCAGTCCCAGGCCCTTAATTCCGGTAACCCGGTTCTGAAGACTTACGATTTGGTCGCCGTCAAGCCCTTGAATCAGTCCGCCTTCGACCTCGCCTGTGAGAAATTGGAGGTGGATATAATTGCGATTGATTTCTCGGAGAAGTTGCCGTTTCGATTGAAGATGCCCATGGTTAAAGCTGCAATGGAGCGCGGATTGTATTTTGAGATCACATATGCGAATATCATTGCCGATGTTCAAGCCAGAAAGCAAATAATAACCAATGCTAAGTTACTGGTAGATTGGACTCGAGGAAGGAATCTAATAATTTGCAGTGCTGCCCCGACTGCAAATGAATTTAGGGGGCCATATGATGTTGCAAACTTAATGTCATTACTGGGGCTCTCTATGGAGCGAGCTAAAGTGTCTATATCAAGAAATTGTAGGACTCTAGTAGCTAATGCTGTGAGAAAAAAACACTTTTTCAAGGAAACCATAAGAGTTGAAGTTCTGTCATCAGATCAAGAAACTGACAAGAACAAACCTTGGTCTGGTGACGCGTTTCAATGGGATCCCATCTCTAGTGGTGAAGGTGATTTGGTATTAGCTGATTTGGAAAAGTCTTTCAGTACCTCTAGTAACAAAGTATCCAAAACTGCTAAAGCCATTGATTTTGCTTCGGTCATTGACAGCATGCCATCACTTGGGTTTCAAGTCAAGGATCTGATGTGTGGCAATGATGTGGTTGTCTCTCAATCAATGGTTACTTGTAAAAGCATCGTTTCTGTTTCTGAGGCAGTTGAGCAACCAGCTGTGACTGCTGGAGTGCCAAAACAACCTGATAGGGCTTCTTTTCCTCAATCAGGTCAATCTTCTTTGTGTGATAGTCTTGTGGACCAACAAATGTTTGACTGTGAAAATCCTCAGAAATTATATTCCTCTTGTGATACCGCGAATGCTTGTATTGGTGCTGTGGAAATTAAATCTCCTACATTAACTTCTGAAGCAAAACCAAACAATGCAGATGGTACAGATGGGAATATTGATTTGATTTTGAACGAAATTCATGATTTGCAATCACAGAAGTGCGTGACTAATCGTGAATTGGATGTTGTGCCACCTAATGATAATTTAACATTTCAAGCATTAGACATTGGATTAAATGCTGCTTGTACTGCTAATTCTGAAGTTGAAGTTTCCACAAATTACCAGGAATCAGATATTCCTGCTCCTCACAGTGAAGAGGCTTTGTGTGTGGATCGTTCTGATACACAAATTGATGTGATGGATGAAATTGTGAAGAGTAAAGAAGAAAAATCTCTGTATTTGAATTCATCATCACTGCATATTTCAGAAAAGGATCAATTCAGGGAATCTGGAGATGATATAGTTGTACTTGCAAATCAGGTTCCTGTTCTGGAGTCCAATGATGATATGGCAGCACCTGCAATGGATGATTATTTAGTTGCAAGGCATGGGTCAATGGAAGTGACTATGGAAGAGAACGAAAATGGGAAAGTTGATACTGAAATTAACCATCCAGACTCGGTTCAATCTATATCAGGGAAATCCAGACCAAAAAGGAAGACTCCTCATCAAGTGAAGTTTCTTCCTCTTAAGCGATTGTTGCATATTGTACCTTTCAAGAAAGTGCGGAGAAATAAGAAGAAAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0099116 GO:1901360 GO:1901363 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

CCT RNase_P_p30

Protein Analysis

655

Amino Acids

72.12

Weight (kDa)

5.62

Isoelectric Point (pI)

45.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_P_p30	PF01876	5 - 242	6.9e-49	RNase P subunit p30

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59980 AT5G59980 AT5G59980 AT5G59980
fragaria_vesca	FvH4_3g34550 FvH4_3g34550
malus_domestica	MD11G1117900.v1.1
prunus_persica	Prupe.6G088000_v2.0.a1 Prupe.6G088000_v2.0.a1
pyrus_communis	pycom03g08460 pycom11g09880
rosa_chinensis	RchiOBHm_Chr4g0385531 RchiOBHm_Chr5g0062191
rosa_laevigata	RLG00000010219 RLG00000035541
rosa_multiflora	Rmu_co8004892.1_g000001 Rmu_sc0014282.1_g000010 Rmu_sc0018073.1_g000001 Rmu_ssc0000409.1_g000011
rosa_roxburghii	Rroxscaffold_1G00018520 Rroxscaffold_5G00333410
rosa_rugosa	Rorug05G0347200 Rorug07G0171200 Rorug07G0171200 Rorug07G0171300
rosa_samantha	Rh4AG006400 Rh4DG005200 Rh5AG407700 Rh5BG421400 Rh5CG445400 Rh5DG436400 Rh7AG313200 Rh7BG303900 Rh7CG331600 Rh7DG312000
rosa_wichuraiana	Rw5G038420 Rw7G026520 Rw7G028230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1741
Acc36I	ACCTGC	1 cut(s)	1741
AccB7I	CCANNNNNTGG	1 cut(s)	992
AccBSI	CCGCTC	1 cut(s)	258
AccII	CGCG	4 cut(s)	237, 501, 848, 1241
AccIII	TCCGGA	1 cut(s)	107
AciI	CCGC	9 cut(s)	124, 235, 256, 271, 283, 390, 501, 1239, 1942
AclWI	GGATC	5 cut(s)	854, 867, 1017, 1554, 1656
AcsI	RAATTY	3 cut(s)	644, 1350, 1618
AcuI	CTGAAG	3 cut(s)	368, 1311, 1494
AcvI	CACGTG	1 cut(s)	68
AcyI	GRCGYC	1 cut(s)	138
AfaI	GTAC	6 cut(s)	278, 919, 1318, 1462, 1683, 1926
AfiI	CCNNNNNNNGG	4 cut(s)	319, 839, 992, 1151
AflII	CTTAAG	1 cut(s)	1904
AflIII	ACRYGT	2 cut(s)	65, 846
AjnI	CCWGG	3 cut(s)	90, 318, 1497
AleI	CACNNNNGTG	1 cut(s)	1372
AluBI	AGCT	7 cut(s)	76, 97, 488, 707, 746, 896, 1100
AluI	AGCT	7 cut(s)	76, 97, 488, 707, 746, 896, 1100
Alw21I	GWGCWC	1 cut(s)	99
Alw26I	GTCTC	2 cut(s)	296, 1042
AlwI	GGATC	5 cut(s)	854, 867, 1017, 1554, 1656
AlwNI	CAGNNNCTG	1 cut(s)	1733
Ama87I	CYCGRG	1 cut(s)	597
Aor13HI	TCCGGA	1 cut(s)	107
AoxI	GGCC	4 cut(s)	3, 87, 321, 653
ApeKI	GCWGC	4 cut(s)	488, 626, 1454, 1727
ApoI	RAATTY	3 cut(s)	644, 1350, 1618
ArsI	GACNNNNNNTTYG	4 cut(s)	343, 375, 662, 694
AspLEI	GCGC	2 cut(s)	299, 501
AspS9I	GGNCC	6 cut(s)	34, 49, 88, 322, 653, 1183
AsuC2I	CCSGG	1 cut(s)	341
AsuHPI	GGTGA	5 cut(s)	91, 280, 854, 887, 893
AvaI	CYCGRG	1 cut(s)	597
AvaII	GGWCC	3 cut(s)	34, 49, 1183
BamHI	GGATCC	1 cut(s)	859
BanII	GRGCYC	2 cut(s)	99, 693
BbrPI	CACGTG	1 cut(s)	68
BbsI	GAAGAC	2 cut(s)	356, 1880
Bbv12I	GWGCWC	1 cut(s)	99
BbvCI	CCTCAGC	1 cut(s)	17
BbvI	GCAGC	4 cut(s)	475, 613, 1441, 1739
BccI	CCATC	7 cut(s)	173, 872, 994, 1307, 1316, 1567, 1833
BceAI	ACGGC	2 cut(s)	353, 442
BcgI	CGANNNNNNTGC	2 cut(s)	290, 324
BciT130I	CCWGG	3 cut(s)	92, 320, 1499
BciVI	GTATCC	1 cut(s)	946
BcnI	CCSGG	1 cut(s)	341
BcoDI	GTCTC	2 cut(s)	296, 1042
BfaI	CTAG	3 cut(s)	740, 870, 924
BfrI	CTTAAG	1 cut(s)	1904
BfuAI	ACCTGC	1 cut(s)	1741
BfuI	GTATCC	1 cut(s)	946
BisI	GCNGC	4 cut(s)	489, 627, 1455, 1728
BlsI	GCNGC	4 cut(s)	490, 628, 1456, 1729
Bme1390I	CCNGG	4 cut(s)	92, 320, 341, 1499
Bme18I	GGWCC	3 cut(s)	34, 49, 1183
BmeT110I	CYCGRG	1 cut(s)	597
BmgT120I	GGNCC	6 cut(s)	34, 49, 88, 322, 653, 1183
BmiI	GGNNCC	4 cut(s)	36, 654, 861, 1698
BmrFI	CCNGG	4 cut(s)	92, 320, 341, 1499
BmrI	ACTGGG	2 cut(s)	307, 695
BmsI	GCATC	2 cut(s)	462, 1074
BmuI	ACTGGG	2 cut(s)	307, 695
BpiI	GAAGAC	2 cut(s)	356, 1880
BpmI	CTGGAG	4 cut(s)	113, 1131, 1686, 1727
Bpu10I	CCTNAGC	1 cut(s)	17
BpuEI	CTTGAG	1 cut(s)	179
BpuMI	CCSGG	1 cut(s)	341
BsaAI	YACGTR	1 cut(s)	68
BsaHI	GRCGYC	1 cut(s)	138
BsaI	GGTCTC	1 cut(s)	296
BsaJI	CCNNGG	6 cut(s)	84, 90, 244, 318, 477, 833
BsaWI	WCCGGW	3 cut(s)	46, 107, 332
BsaXI	ACNNNNNCTCC	2 cut(s)	146, 176
Bsc4I	CCNNNNNNNGG	4 cut(s)	319, 839, 992, 1151
Bse1I	ACTGG	4 cut(s)	274, 313, 588, 690
Bse3DI	GCAATG	4 cut(s)	498, 534, 1030, 1743
BseAI	TCCGGA	1 cut(s)	107
BseBI	CCWGG	3 cut(s)	92, 320, 1499
BseDI	CCNNGG	6 cut(s)	84, 90, 244, 318, 477, 833
BseGI	GGATG	5 cut(s)	165, 1402, 1582, 1747, 1825
BseLI	CCNNNNNNNGG	4 cut(s)	319, 839, 992, 1151
BseMI	GCAATG	4 cut(s)	498, 534, 1030, 1743
BseMII	CTCAG	3 cut(s)	31, 1071, 1226
BseNI	ACTGG	4 cut(s)	274, 313, 588, 690
BseRI	GAGGAG	9 cut(s)	164, 182, 195, 200, 208, 233, 250, 1509, 1869
BseXI	GCAGC	4 cut(s)	475, 613, 1441, 1739
Bsh1236I	CGCG	4 cut(s)	237, 501, 848, 1241
Bsh1285I	CGRYCG	1 cut(s)	157
BshFI	GGCC	4 cut(s)	5, 89, 323, 655
BsiEI	CGRYCG	1 cut(s)	157
BsiHKAI	GWGCWC	1 cut(s)	99
BsiHKCI	CYCGRG	1 cut(s)	597
BsiSI	CCGG	4 cut(s)	47, 108, 333, 341
BslFI	GGGAC	2 cut(s)	236, 301
BslI	CCNNNNNNNGG	4 cut(s)	319, 839, 992, 1151
BsmAI	GTCTC	2 cut(s)	296, 1042
BsmFI	GGGAC	2 cut(s)	236, 301
BsmI	GAATGC	1 cut(s)	1249
BsnI	GGCC	4 cut(s)	5, 89, 323, 655
Bso31I	GGTCTC	1 cut(s)	296
BsoBI	CYCGRG	1 cut(s)	597
Bsp1286I	GDGCHC	2 cut(s)	99, 693
Bsp13I	TCCGGA	1 cut(s)	107
Bsp143I	GATC	8 cut(s)	53, 148, 516, 808, 859, 1009, 1546, 1648
Bsp19I	CCATGG	1 cut(s)	477
BspACI	CCGC	9 cut(s)	124, 235, 256, 271, 283, 390, 501, 1239, 1942
BspANI	GGCC	4 cut(s)	5, 89, 323, 655
BspCNI	CTCAG	3 cut(s)	30, 1072, 1225
BspEI	TCCGGA	1 cut(s)	107
BspFNI	CGCG	4 cut(s)	237, 501, 848, 1241
BspHI	TCATGA	1 cut(s)	1354
BspLI	GGNNCC	4 cut(s)	36, 654, 861, 1698
BspMI	ACCTGC	1 cut(s)	1741
BspPI	GGATC	5 cut(s)	854, 867, 1017, 1554, 1656
BspTI	CTTAAG	1 cut(s)	1904
BspTNI	GGTCTC	1 cut(s)	296
BsrBI	CCGCTC	1 cut(s)	258
BsrDI	GCAATG	4 cut(s)	498, 534, 1030, 1743
BsrI	ACTGG	4 cut(s)	274, 313, 588, 690
BssECI	CCNNGG	6 cut(s)	84, 90, 244, 318, 477, 833
BssMI	GATC	8 cut(s)	53, 148, 516, 808, 859, 1009, 1546, 1648
BssNI	GRCGYC	1 cut(s)	138
BssT1I	CCWWGG	3 cut(s)	84, 477, 833
Bst2UI	CCWGG	3 cut(s)	92, 320, 1499
Bst4CI	ACNGT	4 cut(s)	158, 292, 1202, 1526
Bst6I	CTCTTC	3 cut(s)	1524, 1583, 1782
BstACI	GRCGYC	1 cut(s)	138
BstAFI	CTTAAG	1 cut(s)	1904
BstAPI	GCANNNNNTGC	2 cut(s)	68, 1733
BstBAI	YACGTR	1 cut(s)	68
BstC8I	GCNNGC	2 cut(s)	705, 983
BstDEI	CTNAG	4 cut(s)	17, 576, 1080, 1212
BstDSI	CCRYGG	1 cut(s)	477
BstEII	GGTNACC	2 cut(s)	79, 335
BstENI	CCTNNNNNAGG	1 cut(s)	1149
BstF5I	GGATG	5 cut(s)	165, 1402, 1582, 1747, 1825
BstFNI	CGCG	4 cut(s)	237, 501, 848, 1241
BstHHI	GCGC	2 cut(s)	299, 501
BstKTI	GATC	8 cut(s)	56, 151, 519, 811, 862, 1012, 1549, 1651
BstMAI	GTCTC	2 cut(s)	296, 1042
BstMBI	GATC	8 cut(s)	53, 148, 516, 808, 859, 1009, 1546, 1648
BstMCI	CGRYCG	1 cut(s)	157
BstMWI	GCNNNNNNNGC	6 cut(s)	68, 635, 1106, 1463, 1733, 1915
BstNI	CCWGG	3 cut(s)	92, 320, 1499
BstNSI	RCATGY	1 cut(s)	985
BstPI	GGTNACC	2 cut(s)	79, 335
BstSCI	CCNGG	4 cut(s)	90, 318, 339, 1497
BstUI	CGCG	4 cut(s)	237, 501, 848, 1241
BstV1I	GCAGC	4 cut(s)	475, 613, 1441, 1739
BstV2I	GAAGAC	2 cut(s)	356, 1880
BstX2I	RGATCY	2 cut(s)	859, 1009
BstXI	CCANNNNNNTGG	1 cut(s)	91
BstYI	RGATCY	2 cut(s)	859, 1009
BsuI	GTATCC	1 cut(s)	946
BsuRI	GGCC	4 cut(s)	5, 89, 323, 655
BtgI	CCRYGG	1 cut(s)	477
BtsCI	GGATG	5 cut(s)	165, 1402, 1582, 1747, 1825
BtsI	GCAGTG	2 cut(s)	628, 1628
BtsIMutI	CAGTG	3 cut(s)	628, 1531, 1628
BveI	ACCTGC	1 cut(s)	1741
Cac8I	GCNNGC	2 cut(s)	705, 983
CaiI	CAGNNNCTG	1 cut(s)	1733
CciI	TCATGA	1 cut(s)	1354
CfoI	GCGC	2 cut(s)	299, 501
Cfr13I	GGNCC	6 cut(s)	34, 49, 88, 322, 653, 1183
CpoI	CGGWCCG	1 cut(s)	49
CseI	GACGC	2 cut(s)	127, 854
Csp6I	GTAC	6 cut(s)	277, 918, 1317, 1461, 1682, 1925
CspI	CGGWCCG	1 cut(s)	49
CviAII	CATG	5 cut(s)	142, 478, 982, 1355, 1763
CviQI	GTAC	6 cut(s)	277, 918, 1317, 1461, 1682, 1925
DdeI	CTNAG	4 cut(s)	17, 576, 1080, 1212
DpnI	GATC	8 cut(s)	55, 150, 518, 810, 861, 1011, 1548, 1650
DpnII	GATC	8 cut(s)	53, 148, 516, 808, 859, 1009, 1546, 1648
Eam1104I	CTCTTC	3 cut(s)	1524, 1583, 1782
EarI	CTCTTC	3 cut(s)	1524, 1583, 1782
EciI	GGCGGA	2 cut(s)	260, 379
Ecl136II	GAGCTC	1 cut(s)	97
Eco130I	CCWWGG	3 cut(s)	84, 477, 833
Eco24I	GRGCYC	2 cut(s)	99, 693
Eco31I	GGTCTC	1 cut(s)	296
Eco47I	GGWCC	3 cut(s)	34, 49, 1183
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	3 cut(s)	368, 1311, 1494
Eco72I	CACGTG	1 cut(s)	68
Eco88I	CYCGRG	1 cut(s)	597
Eco91I	GGTNACC	2 cut(s)	79, 335
EcoICRI	GAGCTC	1 cut(s)	97
EcoNI	CCTNNNNNAGG	1 cut(s)	1149
EcoO109I	RGGNCCY	2 cut(s)	88, 322
EcoO65I	GGTNACC	2 cut(s)	79, 335
EcoRI	GAATTC	1 cut(s)	1618
EcoRII	CCWGG	3 cut(s)	90, 318, 1497
EcoT14I	CCWWGG	3 cut(s)	84, 477, 833
EcoT38I	GRGCYC	2 cut(s)	99, 693
ErhI	CCWWGG	3 cut(s)	84, 477, 833
FaeI	CATG	5 cut(s)	145, 481, 985, 1358, 1766
FaqI	GGGAC	2 cut(s)	236, 301
FatI	CATG	5 cut(s)	141, 477, 981, 1354, 1762
FauI	CCCGC	2 cut(s)	263, 290
FauNDI	CATATG	2 cut(s)	523, 658
Fnu4HI	GCNGC	4 cut(s)	489, 627, 1455, 1728
FokI	GGATG	5 cut(s)	152, 1409, 1589, 1754, 1812
FriOI	GRGCYC	2 cut(s)	99, 693
Fsp4HI	GCNGC	4 cut(s)	489, 627, 1455, 1728
FspBI	CTAG	3 cut(s)	740, 870, 924
GlaI	GCGC	2 cut(s)	298, 500
GluI	GCNGC	4 cut(s)	489, 627, 1455, 1728
GsuI	CTGGAG	4 cut(s)	113, 1131, 1686, 1727
HaeIII	GGCC	4 cut(s)	5, 89, 323, 655
HapII	CCGG	4 cut(s)	47, 108, 333, 341
HgaI	GACGC	2 cut(s)	127, 854
HhaI	GCGC	2 cut(s)	299, 501
Hin1I	GRCGYC	1 cut(s)	138
Hin1II	CATG	5 cut(s)	145, 481, 985, 1358, 1766
Hin6I	GCGC	2 cut(s)	297, 499
HinP1I	GCGC	2 cut(s)	297, 499
HincII	GTYRAC	1 cut(s)	226
HindII	GTYRAC	1 cut(s)	226
HpaII	CCGG	4 cut(s)	47, 108, 333, 341
HphI	GGTGA	5 cut(s)	91, 280, 854, 887, 893
Hpy166II	GTNNAC	3 cut(s)	226, 279, 1183
Hpy8I	GTNNAC	3 cut(s)	226, 279, 1183
HpyAV	CCTTC	6 cut(s)	16, 127, 195, 403, 597, 872
HpyCH4III	ACNGT	4 cut(s)	158, 292, 1202, 1526
HpyCH4IV	ACGT	1 cut(s)	67
HpyF10VI	GCNNNNNNNGC	6 cut(s)	68, 635, 1106, 1463, 1733, 1915
HpyF3I	CTNAG	4 cut(s)	17, 576, 1080, 1212
HpySE526I	ACGT	1 cut(s)	67
Hsp92I	GRCGYC	1 cut(s)	138
Hsp92II	CATG	5 cut(s)	145, 481, 985, 1358, 1766
HspAI	GCGC	2 cut(s)	297, 499
Kpn2I	TCCGGA	1 cut(s)	107
Kzo9I	GATC	8 cut(s)	53, 148, 516, 808, 859, 1009, 1546, 1648
LmnI	GCTCC	6 cut(s)	94, 167, 263, 496, 700, 1522
Lsp1109I	GCAGC	4 cut(s)	475, 613, 1441, 1739
LweI	GCATC	2 cut(s)	462, 1074
MaeI	CTAG	3 cut(s)	740, 870, 924
MaeII	ACGT	1 cut(s)	67
MaeIII	GTNAC	9 cut(s)	79, 335, 579, 842, 926, 1051, 1102, 1378, 1777
MalI	GATC	8 cut(s)	55, 150, 518, 810, 861, 1011, 1548, 1650
MbiI	CCGCTC	1 cut(s)	258
MboI	GATC	8 cut(s)	53, 148, 516, 808, 859, 1009, 1546, 1648
MboII	GAAGA	9 cut(s)	361, 481, 1152, 1541, 1600, 1610, 1799, 1885, 1889
MflI	RGATCY	2 cut(s)	859, 1009
MhlI	GDGCHC	2 cut(s)	99, 693
MluI	ACGCGT	1 cut(s)	846
MlyI	GAGTC	5 cut(s)	589, 730, 1718, 1826, 1870
MroI	TCCGGA	1 cut(s)	107
MslI	CAYNNNNRTG	1 cut(s)	1372
MspA1I	CMGCKG	1 cut(s)	1100
MspCI	CTTAAG	1 cut(s)	1904
MspI	CCGG	4 cut(s)	47, 108, 333, 341
MspR9I	CCNGG	4 cut(s)	92, 320, 341, 1499
Mva1269I	GAATGC	1 cut(s)	1249
MvaI	CCWGG	3 cut(s)	92, 320, 1499
MvnI	CGCG	4 cut(s)	237, 501, 848, 1241
MwoI	GCNNNNNNNGC	6 cut(s)	68, 635, 1106, 1463, 1733, 1915
NciI	CCSGG	1 cut(s)	341
NcoI	CCATGG	1 cut(s)	477
NdeI	CATATG	2 cut(s)	523, 658
NdeII	GATC	8 cut(s)	53, 148, 516, 808, 859, 1009, 1546, 1648
NlaIII	CATG	5 cut(s)	145, 481, 985, 1358, 1766
NlaIV	GGNNCC	4 cut(s)	36, 654, 861, 1698
NmeAIII	GCCGAG	2 cut(s)	78, 325
NmuCI	GTSAC	5 cut(s)	79, 842, 1102, 1378, 1777
NspI	RCATGY	1 cut(s)	985
OliI	CACNNNNGTG	1 cut(s)	1372
PaeI	GCATGC	1 cut(s)	985
PaeR7I	CTCGAG	1 cut(s)	597
PagI	TCATGA	1 cut(s)	1354
PaqCI	CACCTGC	1 cut(s)	1741
PctI	GAATGC	1 cut(s)	1249
PfeI	GAWTC	5 cut(s)	111, 382, 607, 1502, 1661
PflMI	CCANNNNNTGG	1 cut(s)	992
PkrI	GCNGC	4 cut(s)	490, 628, 1456, 1729
PleI	GAGTC	5 cut(s)	589, 730, 1717, 1826, 1870
PmaCI	CACGTG	1 cut(s)	68
PmlI	CACGTG	1 cut(s)	68
PpsI	GAGTC	5 cut(s)	589, 730, 1717, 1826, 1870
Ppu21I	YACGTR	1 cut(s)	68
Psp124BI	GAGCTC	1 cut(s)	99
Psp6I	CCWGG	3 cut(s)	90, 318, 1497
PspCI	CACGTG	1 cut(s)	68
PspEI	GGTNACC	2 cut(s)	79, 335
PspGI	CCWGG	3 cut(s)	90, 318, 1497
PspN4I	GGNNCC	4 cut(s)	36, 654, 861, 1698
PspPI	GGNCC	6 cut(s)	34, 49, 88, 322, 653, 1183
PspXI	VCTCGAGB	1 cut(s)	597
PstNI	CAGNNNCTG	1 cut(s)	1733
PsuI	RGATCY	2 cut(s)	859, 1009
PvuII	CAGCTG	1 cut(s)	1100
RsaI	GTAC	6 cut(s)	278, 919, 1318, 1462, 1683, 1926
RsaNI	GTAC	6 cut(s)	277, 918, 1317, 1461, 1682, 1925
RseI	CAYNNNNRTG	1 cut(s)	1372
Rsr2I	CGGWCCG	1 cut(s)	49
RsrII	CGGWCCG	1 cut(s)	49
SacI	GAGCTC	1 cut(s)	99
SatI	GCNGC	4 cut(s)	489, 627, 1455, 1728
Sau3AI	GATC	8 cut(s)	53, 148, 516, 808, 859, 1009, 1546, 1648
Sau96I	GGNCC	6 cut(s)	34, 49, 88, 322, 653, 1183
SchI	GAGTC	5 cut(s)	589, 730, 1718, 1826, 1870
ScrFI	CCNGG	4 cut(s)	92, 320, 341, 1499
SduI	GDGCHC	2 cut(s)	99, 693
SfaNI	GCATC	2 cut(s)	462, 1074
Sfr274I	CTCGAG	1 cut(s)	597
SinI	GGWCC	3 cut(s)	34, 49, 1183
SlaI	CTCGAG	1 cut(s)	597
SmiMI	CAYNNNNRTG	1 cut(s)	1372
SmlI	CTYRAG	3 cut(s)	194, 597, 1904
SmoI	CTYRAG	3 cut(s)	194, 597, 1904
SphI	GCATGC	1 cut(s)	985
SsiI	CCGC	9 cut(s)	124, 235, 256, 271, 283, 390, 501, 1239, 1942
SspI	AATATT	1 cut(s)	1330
SspMI	CTAG	3 cut(s)	740, 870, 924
SstI	GAGCTC	1 cut(s)	99
StyD4I	CCNGG	4 cut(s)	90, 318, 339, 1497
StyI	CCWWGG	3 cut(s)	84, 477, 833
TaaI	ACNGT	4 cut(s)	158, 292, 1202, 1526
TaiI	ACGT	1 cut(s)	70
TaqI	TCGA	4 cut(s)	12, 396, 463, 598
TaqII	GACCGA	2 cut(s)	66, 958
TatI	WGTACW	3 cut(s)	276, 1460, 1681
TfiI	GAWTC	5 cut(s)	111, 382, 607, 1502, 1661
TscAI	CASTG	3 cut(s)	628, 1531, 1635
TseFI	GTSAC	5 cut(s)	79, 842, 1102, 1378, 1777
TseI	GCWGC	4 cut(s)	488, 626, 1454, 1727
Tsp45I	GTSAC	5 cut(s)	79, 842, 1102, 1378, 1777
TspDTI	ATGAA	5 cut(s)	146, 657, 1343, 1593, 1611
TspGWI	ACGGA	2 cut(s)	47, 211
TspRI	CASTG	3 cut(s)	628, 1531, 1635
Van91I	CCANNNNNTGG	1 cut(s)	992
Vha464I	CTTAAG	1 cut(s)	1904
VpaK11BI	GGWCC	3 cut(s)	34, 49, 1183
XagI	CCTNNNNNAGG	1 cut(s)	1149
XapI	RAATTY	3 cut(s)	644, 1350, 1618
XceI	RCATGY	1 cut(s)	985
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1720
XhoI	CTCGAG	1 cut(s)	597
XspI	CTAG	3 cut(s)	740, 870, 924

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.