Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000585

Physical Location & Seq

Genomic Coordinates Forward (+)

16653303 .. 16655350

Gene Structure 2048 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g13000.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGCTCTCCTATCTTCACCTCACATCTTGCACCTCCCAACATCAAAGACTTCCTCTACAACAAGCTCAAGCCAACCAATCCATACCTCGTATAATTTTTGCACCACGCACCTCCACAACCGCAACCACCACCACCATGACACAACACCGCTTCCTTCTCGTTACATACCCTGCTCAAGGCCACATCAATCCTTCCTTGCAATTTGTCAAGTGTCTCATCCGCACCACCGGCGCCGAAGTTACGTACGTCACGGCCCTATCTGCGCACCGCCGCATAGGCAATAGCTCGAGCAAGCCTCGTGGCCTGACCTTCGCTCCCTTCTCCGACGGCTACGACGACGGGTTGAAGCCCGGGGATGACATACCCCATTACCTGTCCGAGTTAAGGCGCCGTGGCTCGCATGCACTCGCAGATATCGTGGTGTCTAGTGCTAACGAGGGCCGCCCTTACACTTGCATAGTGTACACCATACTACTCCCTTGGGTGGCGCAAGTGGCGAGTGAGCTTCACCTCCCGGCCGCGCTCGTTTGGATTCAGCCGGCCACAGTGTTCGACATATACTACTATTACCTCAACGGCTACAAAGATCTCATCAGAAACAATGCTACGGCTAAAAGTTGTGATCCTTGCCATGGAGTAGAATTACCAGGACTGCCACTAGCGCTGAAGAGCCGCGACCTTCCCTCCTTCATGGTGGATTCAAATCCCTACGATTTTGCTTTGCCACTGTTCAAAGAACAGTTCGAGCAGCTAGGAAAAGAAAGCAAGCCAACCATCCTGGTGAACACGTTCGACGCACTTGAGCCGGAGGCCTTGAAAGCAATCGACAAGTACAACTTGATCGGAATCGGTCCTCTAATACCCTCTGCTTACTTGGACGGCAAGGATCCATCCGATAAATCTTTCGGAGGCGATTTATTTGAGAAATCAAAGGACTCGGTGTACCTAGGTTGGCTGAACTCAAAGCCAAAAGAGTCTGTCGTATACGTCTCGTTCGGGAGCATTTCCGTATTGTCCAAGATTCAAATGGAGGAAATCGCAAAAGGGTTGTTGCTATCCGGTCGTCCGTTTTTGTGGGTGATTAGAGAAAACCAAAAGAACGGAGAAGGTAAAGAAGAAGACAAAGTGAGTTGCAGAGAGGAACTAGAGGAGCTTGGGATGATAGTCCCGTGGTGTAGTCAAGTGGAAGTTCTATCAAATCCTTCATTAGGTTGCTTTGTGACACATTGCGGCTGGAATTCAACGATGGAGAGTTTGGTTTCTGGTGTCCCGGTGGTGGCGTTTCCACAATGGACCGACCAAGGCACAAATGCCAAGCTGATAGAGGACACTTGGAAGACAGGAGTGAGGGTGGAACCGAATGAGGAGGGTGGTGTTGTGGGTGAGGAAATTAAGAGGTGTTTGGATTTGGTGATGGAAAGTGATAAGATGAGGATGAATGCTAAGAAATGGAAGGGTCTGGCAAGAGAGGCTGTGGGTGAAGGTGGCTCTTCTGACAAGAACATGAAGGTGTTTCTGGATCAGATTGGAGATGGTTGTTTTCTAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008194 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

517

Amino Acids

57.13

Weight (kDa)

5.78

Isoelectric Point (pI)

39.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	319 - 474	3.1e-21	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15550
fragaria_vesca	FvH4_4g13000 FvH4_4g13010 FvH4_4g13020
malus_domestica	MD04G1019300.v1.1 MD04G1019400.v1.1 MD04G1019500.v1.1 MD04G1019600.v1.1 MD04G1019700.v1.1
prunus_persica	Prupe.1G169100_v2.0.a1 Prupe.1G169200_v2.0.a1 Prupe.1G169300_v2.0.a1
pyrus_communis	pycom04g01550 pycom04g01560 pycom04g01580 pycom12g16570
rosa_chinensis	RchiOBHm_Chr4g0412431 RchiOBHm_Chr4g0412441 RchiOBHm_Chr4g0412481 RchiOBHm_Chr4g0412491 RchiOBHm_Chr4g0412501 RchiOBHm_Chr4g0412731 RchiOBHm_Chr4g0412741
rosa_laevigata	RLG00000008262 RLG00000008264 RLG00000008266 RLG00000008267 RLG00000008285 RLG00000008286 RLG00000008299 RLG00000008300
rosa_multiflora	Rmu_co8207190.1_g000001 Rmu_co8436959.1_g000001 Rmu_co8466533.1_g000001 Rmu_sc0001238.1_g000017 Rmu_sc0001238.1_g000019 Rmu_sc0001238.1_g000022 Rmu_sc0001238.1_g000027 Rmu_sc0001238.1_g000036 Rmu_sc0003914.1_g000013 Rmu_sc0005615.1_g000006 Rmu_sc0008191.1_g000017
rosa_roxburghii	Rroxscaffold_161G00448030 Rroxscaffold_161G00448050 Rroxscaffold_5G00356580 Rroxscaffold_5G00356640 Rroxscaffold_5G00356700 Rroxscaffold_5G00356890 Rroxscaffold_5G00356930 Rroxscaffold_5G00356960
rosa_rugosa	Rorug04G0103500 Rorug04G0103600.1 Rorug04G0103800.1 Rorug04G0103900.1 Rorug04G0116000 Rorug04G0116000 Rorug04G0116000 Rorug04G0116300
rosa_samantha	Rh4AG173100 Rh4AG173400 Rh4AG175100 Rh4AG175200 Rh4BG172800 Rh4BG174400 Rh4BG174700 Rh4BG174800 Rh4CG183800 Rh4CG183900 Rh4CG184400 Rh4CG186100 Rh4DG168100 Rh4DG168800 Rh4DG171000 Rh4DG171200 Rh4DG171800 Rh4DG171900
rosa_wichuraiana	Rw0G007780 Rw4G014480 Rw4G014670 Rw4G014680 Rw4G014700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	264
AccB1I	GGYRCC	2 cut(s)	230, 387
AccI	GTMKAC	1 cut(s)	984
AccII	CGCG	2 cut(s)	521, 675
AciI	CCGC	9 cut(s)	120, 148, 220, 268, 271, 442, 519, 673, 1230
AclWI	GGATC	4 cut(s)	617, 881, 894, 1527
AcoI	YGGCCR	2 cut(s)	516, 540
AcsI	RAATTY	1 cut(s)	1237
AcuI	CTGAAG	1 cut(s)	686
AcyI	GRCGYC	2 cut(s)	231, 388
AfaI	GTAC	4 cut(s)	245, 464, 833, 944
AfeI	AGCGCT	1 cut(s)	663
AfiI	CCNNNNNNNGG	6 cut(s)	176, 384, 484, 632, 1208, 1276
AflIII	ACRYGT	1 cut(s)	786
AgsI	TTSAA	6 cut(s)	346, 702, 733, 817, 1025, 1242
AjnI	CCWGG	2 cut(s)	646, 777
AluBI	AGCT	6 cut(s)	65, 285, 505, 751, 1153, 1318
AluI	AGCT	6 cut(s)	65, 285, 505, 751, 1153, 1318
Alw26I	GTCTC	2 cut(s)	218, 994
AlwI	GGATC	4 cut(s)	617, 881, 894, 1527
Ama87I	CYCGRG	2 cut(s)	286, 350
Aor51HI	AGCGCT	1 cut(s)	663
AoxI	GGCC	7 cut(s)	178, 252, 301, 439, 516, 540, 810
ApeKI	GCWGC	1 cut(s)	748
ApoI	RAATTY	1 cut(s)	1237
Asp700I	GAANNNNTTC	1 cut(s)	788
AspA2I	CCTAGG	1 cut(s)	946
AspLEI	GCGC	6 cut(s)	233, 265, 390, 490, 523, 664
AspS9I	GGNCC	4 cut(s)	253, 439, 851, 1293
AsuC2I	CCSGG	4 cut(s)	351, 352, 515, 1271
AsuHPI	GGTGA	7 cut(s)	8, 500, 793, 1090, 1394, 1423, 1490
AvaI	CYCGRG	2 cut(s)	286, 350
AvaII	GGWCC	2 cut(s)	851, 1293
AvrII	CCTAGG	1 cut(s)	946
BamHI	GGATCC	1 cut(s)	886
BanI	GGYRCC	2 cut(s)	230, 387
BauI	CACGAG	1 cut(s)	297
BbsI	GAAGAC	2 cut(s)	1125, 1343
BbvI	GCAGC	1 cut(s)	760
BccI	CCATC	5 cut(s)	782, 898, 1240, 1408, 1526
BceAI	ACGGC	6 cut(s)	267, 343, 375, 592, 624, 895
BciT130I	CCWGG	2 cut(s)	648, 779
BcnI	CCSGG	4 cut(s)	351, 352, 515, 1271
BcoDI	GTCTC	2 cut(s)	218, 994
BfaI	CTAG	6 cut(s)	426, 659, 752, 947, 1145, 1544
BfoI	RGCGCY	3 cut(s)	234, 391, 665
BglI	GCCNNNNNGGC	1 cut(s)	276
BglII	AGATCT	1 cut(s)	586
BisI	GCNGC	6 cut(s)	271, 442, 519, 673, 749, 1231
BlnI	CCTAGG	1 cut(s)	946
BlsI	GCNGC	6 cut(s)	272, 443, 520, 674, 750, 1232
Bme1390I	CCNGG	6 cut(s)	351, 352, 515, 648, 779, 1271
Bme18I	GGWCC	2 cut(s)	851, 1293
BmeT110I	CYCGRG	2 cut(s)	286, 350
BmgT120I	GGNCC	4 cut(s)	253, 439, 851, 1293
BmiI	GGNNCC	4 cut(s)	232, 389, 888, 1356
BmrFI	CCNGG	6 cut(s)	351, 352, 515, 648, 779, 1271
BpiI	GAAGAC	2 cut(s)	1125, 1343
BplI	GAGNNNNNCTC	2 cut(s)	280, 312
BpuEI	CTTGAG	3 cut(s)	51, 159, 821
BpuMI	CCSGG	4 cut(s)	351, 352, 515, 1271
BsaAI	YACGTR	1 cut(s)	243
BsaBI	GATNNNNATC	2 cut(s)	702, 845
BsaHI	GRCGYC	2 cut(s)	231, 388
BsaJI	CCNNGG	8 cut(s)	350, 351, 391, 479, 631, 946, 1169, 1300
BsaWI	WCCGGW	1 cut(s)	1058
BsaXI	ACNNNNNCTCC	6 cut(s)	298, 328, 668, 698, 1335, 1365
Bsc4I	CCNNNNNNNGG	6 cut(s)	176, 384, 484, 632, 1208, 1276
Bse118I	RCCGGY	2 cut(s)	227, 538
Bse3DI	GCAATG	1 cut(s)	1225
Bse8I	GATNNNNATC	2 cut(s)	702, 845
BseBI	CCWGG	2 cut(s)	648, 779
BseDI	CCNNGG	8 cut(s)	350, 351, 391, 479, 631, 946, 1169, 1300
BseGI	GGATG	6 cut(s)	216, 361, 774, 890, 1164, 1440
BseJI	GATNNNNATC	2 cut(s)	702, 845
BseLI	CCNNNNNNNGG	6 cut(s)	176, 384, 484, 632, 1208, 1276
BseMI	GCAATG	1 cut(s)	1225
BseRI	GAGGAG	2 cut(s)	1163, 1379
BseX3I	CGGCCG	1 cut(s)	516
BseXI	GCAGC	1 cut(s)	760
Bsh1236I	CGCG	2 cut(s)	521, 675
Bsh1285I	CGRYCG	2 cut(s)	519, 1063
BshFI	GGCC	7 cut(s)	180, 254, 303, 441, 518, 542, 812
BshNI	GGYRCC	2 cut(s)	230, 387
BsiEI	CGRYCG	2 cut(s)	519, 1063
BsiHKCI	CYCGRG	2 cut(s)	286, 350
BsiSI	CCGG	7 cut(s)	228, 351, 515, 539, 806, 1059, 1271
BsiWI	CGTACG	1 cut(s)	243
BslFI	GGGAC	2 cut(s)	1151, 1253
BslI	CCNNNNNNNGG	6 cut(s)	176, 384, 484, 632, 1208, 1276
BsmAI	GTCTC	2 cut(s)	218, 994
BsmBI	CGTCTC	1 cut(s)	994
BsmFI	GGGAC	2 cut(s)	1151, 1253
BsmI	GAATGC	1 cut(s)	1444
BsnI	GGCC	7 cut(s)	180, 254, 303, 441, 518, 542, 812
BsoBI	CYCGRG	2 cut(s)	286, 350
Bsp1407I	TGTACA	1 cut(s)	462
Bsp143I	GATC	5 cut(s)	586, 622, 840, 886, 1519
Bsp19I	CCATGG	1 cut(s)	631
BspACI	CCGC	9 cut(s)	120, 148, 220, 268, 271, 442, 519, 673, 1230
BspANI	GGCC	7 cut(s)	180, 254, 303, 441, 518, 542, 812
BspFNI	CGCG	2 cut(s)	521, 675
BspLI	GGNNCC	4 cut(s)	232, 389, 888, 1356
BspPI	GGATC	4 cut(s)	617, 881, 894, 1527
BspQI	GCTCTTC	2 cut(s)	662, 1495
BspT107I	GGYRCC	2 cut(s)	230, 387
BsrDI	GCAATG	1 cut(s)	1225
BsrFI	RCCGGY	2 cut(s)	227, 538
BsrGI	TGTACA	1 cut(s)	462
BssAI	RCCGGY	2 cut(s)	227, 538
BssECI	CCNNGG	8 cut(s)	350, 351, 391, 479, 631, 946, 1169, 1300
BssMI	GATC	5 cut(s)	586, 622, 840, 886, 1519
BssNAI	GTATAC	1 cut(s)	985
BssNI	GRCGYC	2 cut(s)	231, 388
BssSI	CACGAG	1 cut(s)	297
BssT1I	CCWWGG	4 cut(s)	479, 631, 946, 1300
Bst1107I	GTATAC	1 cut(s)	985
Bst2BI	CACGAG	1 cut(s)	297
Bst2UI	CCWGG	2 cut(s)	648, 779
Bst4CI	ACNGT	3 cut(s)	547, 729, 741
Bst6I	CTCTTC	2 cut(s)	662, 1495
BstACI	GRCGYC	2 cut(s)	231, 388
BstAUI	TGTACA	1 cut(s)	462
BstBAI	YACGTR	1 cut(s)	243
BstC8I	GCNNGC	5 cut(s)	293, 398, 402, 540, 767
BstDEI	CTNAG	1 cut(s)	1443
BstDSI	CCRYGG	3 cut(s)	391, 631, 1169
BstENI	CCTNNNNNAGG	2 cut(s)	174, 1206
BstF5I	GGATG	6 cut(s)	216, 361, 774, 890, 1164, 1440
BstFNI	CGCG	2 cut(s)	521, 675
BstH2I	RGCGCY	3 cut(s)	234, 391, 665
BstHHI	GCGC	6 cut(s)	233, 265, 390, 490, 523, 664
BstKTI	GATC	5 cut(s)	589, 625, 843, 889, 1522
BstMAI	GTCTC	2 cut(s)	218, 994
BstMBI	GATC	5 cut(s)	586, 622, 840, 886, 1519
BstMCI	CGRYCG	2 cut(s)	519, 1063
BstMWI	GCNNNNNNNGC	7 cut(s)	228, 260, 276, 494, 661, 818, 1469
BstNI	CCWGG	2 cut(s)	648, 779
BstNSI	RCATGY	1 cut(s)	404
BstSCI	CCNGG	6 cut(s)	349, 350, 513, 646, 777, 1269
BstSNI	TACGTA	1 cut(s)	243
BstUI	CGCG	2 cut(s)	521, 675
BstV1I	GCAGC	1 cut(s)	760
BstV2I	GAAGAC	2 cut(s)	1125, 1343
BstX2I	RGATCY	2 cut(s)	586, 886
BstYI	RGATCY	2 cut(s)	586, 886
BstZ17I	GTATAC	1 cut(s)	985
BstZI	CGGCCG	1 cut(s)	516
BsuRI	GGCC	7 cut(s)	180, 254, 303, 441, 518, 542, 812
BtgI	CCRYGG	3 cut(s)	391, 631, 1169
BtsCI	GGATG	6 cut(s)	216, 361, 774, 890, 1164, 1440
BtsIMutI	CAGTG	2 cut(s)	552, 725
Cac8I	GCNNGC	5 cut(s)	293, 398, 402, 540, 767
CfoI	GCGC	6 cut(s)	233, 265, 390, 490, 523, 664
Cfr10I	RCCGGY	2 cut(s)	227, 538
Cfr13I	GGNCC	4 cut(s)	253, 439, 851, 1293
Cfr9I	CCCGGG	1 cut(s)	350
CseI	GACGC	1 cut(s)	803
Csp6I	GTAC	4 cut(s)	244, 463, 832, 943
CspCI	CAANNNNNGTGG	2 cut(s)	280, 315
CviAII	CATG	5 cut(s)	136, 401, 632, 691, 1504
CviQI	GTAC	4 cut(s)	244, 463, 832, 943
DdeI	CTNAG	1 cut(s)	1443
DinI	GGCGCC	2 cut(s)	232, 389
DpnI	GATC	5 cut(s)	588, 624, 842, 888, 1521
DpnII	GATC	5 cut(s)	586, 622, 840, 886, 1519
EaeI	YGGCCR	2 cut(s)	516, 540
EagI	CGGCCG	1 cut(s)	516
Eam1104I	CTCTTC	2 cut(s)	662, 1495
EarI	CTCTTC	2 cut(s)	662, 1495
EclXI	CGGCCG	1 cut(s)	516
Eco105I	TACGTA	1 cut(s)	243
Eco130I	CCWWGG	4 cut(s)	479, 631, 946, 1300
Eco147I	AGGCCT	1 cut(s)	812
Eco32I	GATATC	1 cut(s)	415
Eco47I	GGWCC	2 cut(s)	851, 1293
Eco47III	AGCGCT	1 cut(s)	663
Eco52I	CGGCCG	1 cut(s)	516
Eco57I	CTGAAG	1 cut(s)	686
Eco88I	CYCGRG	2 cut(s)	286, 350
EcoNI	CCTNNNNNAGG	2 cut(s)	174, 1206
EcoRI	GAATTC	1 cut(s)	1237
EcoRII	CCWGG	2 cut(s)	646, 777
EcoRV	GATATC	1 cut(s)	415
EcoT14I	CCWWGG	4 cut(s)	479, 631, 946, 1300
EgeI	GGCGCC	2 cut(s)	232, 389
EheI	GGCGCC	2 cut(s)	232, 389
ErhI	CCWWGG	4 cut(s)	479, 631, 946, 1300
Esp3I	CGTCTC	1 cut(s)	994
FaeI	CATG	5 cut(s)	139, 404, 635, 694, 1507
FalI	AAGNNNNNCTT	2 cut(s)	821, 853
FaqI	GGGAC	2 cut(s)	1151, 1253
FatI	CATG	5 cut(s)	135, 400, 631, 690, 1503
FblI	GTMKAC	1 cut(s)	984
Fnu4HI	GCNGC	6 cut(s)	271, 442, 519, 673, 749, 1231
FokI	GGATG	6 cut(s)	203, 368, 761, 877, 1171, 1447
Fsp4HI	GCNGC	6 cut(s)	271, 442, 519, 673, 749, 1231
FspBI	CTAG	6 cut(s)	426, 659, 752, 947, 1145, 1544
FspI	TGCGCA	1 cut(s)	264
GlaI	GCGC	6 cut(s)	232, 264, 389, 489, 522, 663
GluI	GCNGC	6 cut(s)	271, 442, 519, 673, 749, 1231
HaeII	RGCGCY	3 cut(s)	234, 391, 665
HaeIII	GGCC	7 cut(s)	180, 254, 303, 441, 518, 542, 812
HapII	CCGG	7 cut(s)	228, 351, 515, 539, 806, 1059, 1271
HgaI	GACGC	1 cut(s)	803
HhaI	GCGC	6 cut(s)	233, 265, 390, 490, 523, 664
Hin1I	GRCGYC	2 cut(s)	231, 388
Hin1II	CATG	5 cut(s)	139, 404, 635, 694, 1507
Hin6I	GCGC	6 cut(s)	231, 263, 388, 488, 521, 662
HinP1I	GCGC	6 cut(s)	231, 263, 388, 488, 521, 662
HinfI	GANTC	6 cut(s)	532, 698, 846, 935, 974, 1021
HpaII	CCGG	7 cut(s)	228, 351, 515, 539, 806, 1059, 1271
HphI	GGTGA	7 cut(s)	8, 500, 793, 1090, 1394, 1423, 1490
Hpy166II	GTNNAC	5 cut(s)	463, 465, 784, 943, 985
Hpy188I	TCNGA	8 cut(s)	325, 379, 596, 845, 895, 908, 1495, 1524
Hpy188III	TCNNGA	2 cut(s)	997, 1517
Hpy8I	GTNNAC	5 cut(s)	463, 465, 784, 943, 985
Hpy99I	CGWCG	4 cut(s)	329, 338, 341, 797
HpyCH4III	ACNGT	3 cut(s)	547, 729, 741
HpyCH4IV	ACGT	4 cut(s)	242, 246, 788, 987
HpyCH4V	TGCA	6 cut(s)	30, 101, 199, 404, 456, 1134
HpyF10VI	GCNNNNNNNGC	7 cut(s)	228, 260, 276, 494, 661, 818, 1469
HpyF3I	CTNAG	1 cut(s)	1443
HpySE526I	ACGT	4 cut(s)	242, 246, 788, 987
Hsp92I	GRCGYC	2 cut(s)	231, 388
Hsp92II	CATG	5 cut(s)	139, 404, 635, 694, 1507
HspAI	GCGC	6 cut(s)	231, 263, 388, 488, 521, 662
KasI	GGCGCC	2 cut(s)	230, 387
KroI	GCCGGC	1 cut(s)	538
KroNI	GCCGGC	1 cut(s)	540
Kzo9I	GATC	5 cut(s)	586, 622, 840, 886, 1519
LguI	GCTCTTC	2 cut(s)	662, 1495
LmnI	GCTCC	3 cut(s)	319, 999, 1150
Lsp1109I	GCAGC	1 cut(s)	760
MaeI	CTAG	6 cut(s)	426, 659, 752, 947, 1145, 1544
MaeII	ACGT	4 cut(s)	242, 246, 788, 987
MaeIII	GTNAC	4 cut(s)	160, 238, 247, 1219
MalI	GATC	5 cut(s)	588, 624, 842, 888, 1521
MboI	GATC	5 cut(s)	586, 622, 840, 886, 1519
MboII	GAAGA	6 cut(s)	5, 679, 1127, 1130, 1348, 1482
MflI	RGATCY	2 cut(s)	586, 886
MluCI	AATT	5 cut(s)	93, 200, 641, 1237, 1389
Mly113I	GGCGCC	2 cut(s)	231, 388
MlyI	GAGTC	2 cut(s)	929, 983
MmeI	TCCRAC	1 cut(s)	348
MroNI	GCCGGC	1 cut(s)	538
MroXI	GAANNNNTTC	1 cut(s)	788
MseI	TTAA	2 cut(s)	383, 1392
MslI	CAYNNNNRTG	3 cut(s)	134, 779, 1508
MspI	CCGG	7 cut(s)	228, 351, 515, 539, 806, 1059, 1271
MspR9I	CCNGG	6 cut(s)	351, 352, 515, 648, 779, 1271
Mva1269I	GAATGC	1 cut(s)	1444
MvaI	CCWGG	2 cut(s)	648, 779
MvnI	CGCG	2 cut(s)	521, 675
MwoI	GCNNNNNNNGC	7 cut(s)	228, 260, 276, 494, 661, 818, 1469
NaeI	GCCGGC	1 cut(s)	540
NarI	GGCGCC	2 cut(s)	231, 388
NciI	CCSGG	4 cut(s)	351, 352, 515, 1271
NcoI	CCATGG	1 cut(s)	631
NdeII	GATC	5 cut(s)	586, 622, 840, 886, 1519
NgoMIV	GCCGGC	1 cut(s)	538
NlaIII	CATG	5 cut(s)	139, 404, 635, 694, 1507
NlaIV	GGNNCC	4 cut(s)	232, 389, 888, 1356
NmuCI	GTSAC	2 cut(s)	247, 1219
NsbI	TGCGCA	1 cut(s)	264
NspI	RCATGY	1 cut(s)	404
PaeI	GCATGC	1 cut(s)	404
PaeR7I	CTCGAG	1 cut(s)	286
PceI	AGGCCT	1 cut(s)	812
PciSI	GCTCTTC	2 cut(s)	662, 1495
PcsI	WCGNNNNNNNCGW	2 cut(s)	333, 414
PctI	GAATGC	1 cut(s)	1444
PdiI	GCCGGC	1 cut(s)	540
PdmI	GAANNNNTTC	1 cut(s)	788
PfeI	GAWTC	4 cut(s)	532, 698, 846, 1021
Pfl23II	CGTACG	1 cut(s)	243
PkrI	GCNGC	6 cut(s)	272, 443, 520, 674, 750, 1232
PleI	GAGTC	2 cut(s)	929, 982
PluTI	GGCGCC	2 cut(s)	234, 391
PpsI	GAGTC	2 cut(s)	929, 982
Ppu21I	YACGTR	1 cut(s)	243
Psp6I	CCWGG	2 cut(s)	646, 777
PspGI	CCWGG	2 cut(s)	646, 777
PspLI	CGTACG	1 cut(s)	243
PspN4I	GGNNCC	4 cut(s)	232, 389, 888, 1356
PspPI	GGNCC	4 cut(s)	253, 439, 851, 1293
PspXI	VCTCGAGB	1 cut(s)	286
PsuI	RGATCY	2 cut(s)	586, 886
RsaI	GTAC	4 cut(s)	245, 464, 833, 944
RsaNI	GTAC	4 cut(s)	244, 463, 832, 943
RseI	CAYNNNNRTG	3 cut(s)	134, 779, 1508
SapI	GCTCTTC	2 cut(s)	662, 1495
SaqAI	TTAA	2 cut(s)	383, 1392
SatI	GCNGC	6 cut(s)	271, 442, 519, 673, 749, 1231
Sau3AI	GATC	5 cut(s)	586, 622, 840, 886, 1519
Sau96I	GGNCC	4 cut(s)	253, 439, 851, 1293
SchI	GAGTC	2 cut(s)	929, 983
ScrFI	CCNGG	6 cut(s)	351, 352, 515, 648, 779, 1271
SfoI	GGCGCC	2 cut(s)	232, 389
Sfr274I	CTCGAG	1 cut(s)	286
SgrAI	CRCCGGYG	1 cut(s)	227
SinI	GGWCC	2 cut(s)	851, 1293
SlaI	CTCGAG	1 cut(s)	286
SmaI	CCCGGG	1 cut(s)	352
SmiMI	CAYNNNNRTG	3 cut(s)	134, 779, 1508
SmlI	CTYRAG	4 cut(s)	66, 174, 286, 800
SmoI	CTYRAG	4 cut(s)	66, 174, 286, 800
SnaBI	TACGTA	1 cut(s)	243
SphI	GCATGC	1 cut(s)	404
Sse9I	AATT	5 cut(s)	93, 200, 641, 1237, 1389
SseBI	AGGCCT	1 cut(s)	812
SsiI	CCGC	9 cut(s)	120, 148, 220, 268, 271, 442, 519, 673, 1230
SspDI	GGCGCC	2 cut(s)	230, 387
SspMI	CTAG	6 cut(s)	426, 659, 752, 947, 1145, 1544
StuI	AGGCCT	1 cut(s)	812
StyD4I	CCNGG	6 cut(s)	349, 350, 513, 646, 777, 1269
StyI	CCWWGG	4 cut(s)	479, 631, 946, 1300
TaaI	ACNGT	3 cut(s)	547, 729, 741
TaiI	ACGT	4 cut(s)	245, 249, 791, 990
TaqI	TCGA	5 cut(s)	287, 552, 744, 792, 825
TaqII	GACCGA	2 cut(s)	839, 1310
TasI	AATT	5 cut(s)	93, 200, 641, 1237, 1389
TatI	WGTACW	2 cut(s)	462, 831
TauI	GCSGC	5 cut(s)	273, 444, 521, 675, 1233
TfiI	GAWTC	4 cut(s)	532, 698, 846, 1021
Tru1I	TTAA	2 cut(s)	383, 1392
Tru9I	TTAA	2 cut(s)	383, 1392
TscAI	CASTG	2 cut(s)	552, 732
TseFI	GTSAC	2 cut(s)	247, 1219
TseI	GCWGC	1 cut(s)	748
Tsp45I	GTSAC	2 cut(s)	247, 1219
TspDTI	ATGAA	4 cut(s)	679, 1194, 1451, 1520
TspGWI	ACGGA	3 cut(s)	997, 1056, 1116
TspMI	CCCGGG	1 cut(s)	350
TspRI	CASTG	2 cut(s)	552, 732
VpaK11BI	GGWCC	2 cut(s)	851, 1293
XagI	CCTNNNNNAGG	2 cut(s)	174, 1206
XapI	RAATTY	1 cut(s)	1237
XceI	RCATGY	1 cut(s)	404
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1024
XhoI	CTCGAG	1 cut(s)	286
XmaI	CCCGGG	1 cut(s)	350
XmaJI	CCTAGG	1 cut(s)	946
XmiI	GTMKAC	1 cut(s)	984
XmnI	GAANNNNTTC	1 cut(s)	788
XspI	CTAG	6 cut(s)	426, 659, 752, 947, 1145, 1544

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.