Rmu_sc0005615.1_g000006

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005615.1
Physical Location & Seq
Reverse (-)
14037 .. 18279
4243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005615.1_g000006.1.cds

Sequence Viewer

Length: 1179 bp
atggaagagagagaaaccataggggacttcgccggagtccgatcaccggtagccggattccggtcaccggccgccggaatccggtcaccggccgccggattccgatcaccggctaccacccactggaaaccagccacagtgttcgacatatactactattacttcaatggctacaaagatatcatcaggaacaataccggtgctgataacaatgacccctcctttgcagtagaattaccaggactgccactatcgttgaggagccgcgaccttccctccttcttgctggcttcgagtccgtacatataccgtttcgctctcccattgttcgaagatcagttggaaaaacttgggaaactaagcaaggcaatcatactggtgaacacgttcgatgcactagaacccgaggccttaaaagcaatcgacaagtacaatttgatcggaatcgggcctttaacgccgtctgctttcttggacgacaaggattcatctgataaatctttcggatgcgatcttttccagaaatcaaaagattccacctacatggaatggctgaattcgaagccggaacagtcggtcgtttacgtctcgtttgggaccgtttccatgctgtccaagattcaaatggaggaaattgcaaaagggttgctggattctggacgtccgtttctgtgggtgattagggaaaaccaaaagaacggagaaggtaaggaaggaaaagaagaagaggagctgagttgtagagaggaactagaagagcttggggtgatagtcccgtggtgtagtcaagtagaggttctctcaaatccttcgttgggttgttttgtgacacattgtggctggaattcaagcttggagagtttagtttgtggggtaccggtggtggcatgtcctcagtggacagatcaatgcactaatgcaaaattgatagaggacacgtggaagacaggggtgagggtagcaccgaatgaggagggtgttgtttcgggtgaggagttgaagaggtgtctggatttggtcatgggaagtcaagagttgagaaggaatgctaagaagtggaagaatttggcgagagaggctgtgagtgaaggggggtcatctgacatgaatttcaaggcgtttctaaaggatattgaagaagtagtcaatttcgatttcgatccgcagcagtcaatttga

Protein Analysis

392

Amino Acids

43.64

Weight (kDa)

4.81

Isoelectric Point (pI)

56.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000585)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15550
fragaria_vesca FvH4_4g13000 FvH4_4g13010 FvH4_4g13020
malus_domestica MD04G1019300.v1.1 MD04G1019400.v1.1 MD04G1019500.v1.1 MD04G1019600.v1.1 MD04G1019700.v1.1
prunus_persica Prupe.1G169100_v2.0.a1 Prupe.1G169200_v2.0.a1 Prupe.1G169300_v2.0.a1
pyrus_communis pycom04g01550 pycom04g01560 pycom04g01580 pycom12g16570
rosa_chinensis RchiOBHm_Chr4g0412431 RchiOBHm_Chr4g0412441 RchiOBHm_Chr4g0412481 RchiOBHm_Chr4g0412491 RchiOBHm_Chr4g0412501 RchiOBHm_Chr4g0412731 RchiOBHm_Chr4g0412741
rosa_laevigata RLG00000008262 RLG00000008264 RLG00000008266 RLG00000008267 RLG00000008285 RLG00000008286 RLG00000008299 RLG00000008300
rosa_multiflora Rmu_co8207190.1_g000001 Rmu_co8436959.1_g000001 Rmu_co8466533.1_g000001 Rmu_sc0001238.1_g000017 Rmu_sc0001238.1_g000019 Rmu_sc0001238.1_g000022 Rmu_sc0001238.1_g000027 Rmu_sc0001238.1_g000036 Rmu_sc0003914.1_g000013 Rmu_sc0005615.1_g000006 Rmu_sc0008191.1_g000017
rosa_roxburghii Rroxscaffold_161G00448030 Rroxscaffold_161G00448050 Rroxscaffold_5G00356580 Rroxscaffold_5G00356640 Rroxscaffold_5G00356700 Rroxscaffold_5G00356890 Rroxscaffold_5G00356930 Rroxscaffold_5G00356960
rosa_rugosa Rorug04G0103500 Rorug04G0103600.1 Rorug04G0103800.1 Rorug04G0103900.1 Rorug04G0116000 Rorug04G0116000 Rorug04G0116000 Rorug04G0116300
rosa_samantha Rh4AG173100 Rh4AG173400 Rh4AG175100 Rh4AG175200 Rh4BG172800 Rh4BG174400 Rh4BG174700 Rh4BG174800 Rh4CG183800 Rh4CG183900 Rh4CG184400 Rh4CG186100 Rh4DG168100 Rh4DG168800 Rh4DG171000 Rh4DG171200 Rh4DG171800 Rh4DG171900
rosa_wichuraiana Rw0G007780 Rw4G014480 Rw4G014670 Rw4G014680 Rw4G014700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 664
Acc65I GGTACC 1 cut(s) 874
AccB1I GGYRCC 1 cut(s) 874
AccB7I CCANNNNNTGG 1 cut(s) 123
AccII CGCG 1 cut(s) 267
AciI CCGC 4 cut(s) 72, 93, 265, 1163
AclWI GGATC 1 cut(s) 1154
AcoI YGGCCR 2 cut(s) 69, 90
AcsI RAATTY 4 cut(s) 556, 844, 1063, 1108
AcvI CACGTG 1 cut(s) 939
AcyI GRCGYC 1 cut(s) 661
AdeI CACNNNGTG 1 cut(s) 836
AfaI GTAC 3 cut(s) 302, 431, 876
AflIII ACRYGT 2 cut(s) 384, 936
AgeI ACCGGT 3 cut(s) 46, 197, 877
AgsI TTSAA 6 cut(s) 166, 623, 849, 1000, 1114, 1136
AjnI CCWGG 1 cut(s) 238
AjuI GAANNNNNNNTTGG 2 cut(s) 836, 868
AluBI AGCT 3 cut(s) 733, 760, 852
AluI AGCT 3 cut(s) 733, 760, 852
Alw26I GTCTC 1 cut(s) 592
AlwI GGATC 1 cut(s) 1154
Ama87I CYCGRG 1 cut(s) 404
AoxI GGCC 4 cut(s) 69, 90, 408, 449
ApeKI GCWGC 1 cut(s) 1165
ApoI RAATTY 4 cut(s) 556, 844, 1063, 1108
ArsI GACNNNNNNTTYG 2 cut(s) 206, 238
AsiGI ACCGGT 3 cut(s) 46, 197, 877
Asp700I GAANNNNTTC 1 cut(s) 386
Asp718I GGTACC 1 cut(s) 874
AspS9I GGNCC 2 cut(s) 449, 597
AsuHPI GGTGA 9 cut(s) 36, 57, 78, 99, 391, 688, 778, 964, 1001
AsuII TTCGAA 2 cut(s) 330, 560
AvaI CYCGRG 1 cut(s) 404
AvaII GGWCC 1 cut(s) 597
BanI GGYRCC 1 cut(s) 874
BbrPI CACGTG 1 cut(s) 939
BbsI GAAGAC 1 cut(s) 950
BceAI ACGGC 1 cut(s) 445
BciT130I CCWGG 1 cut(s) 240
BcoDI GTCTC 1 cut(s) 592
BfaI CTAG 2 cut(s) 398, 752
BisI GCNGC 4 cut(s) 72, 93, 265, 1166
BlsI GCNGC 4 cut(s) 73, 94, 266, 1167
Bme1390I CCNGG 1 cut(s) 240
Bme18I GGWCC 1 cut(s) 597
BmeT110I CYCGRG 1 cut(s) 404
BmgT120I GGNCC 2 cut(s) 449, 597
BmiI GGNNCC 3 cut(s) 263, 598, 876
BmrFI CCNGG 1 cut(s) 240
BmsI GCATC 2 cut(s) 382, 497
BpiI GAAGAC 1 cut(s) 950
BplI GAGNNNNNCTC 2 cut(s) 785, 817
Bpu14I TTCGAA 2 cut(s) 330, 560
BsaAI YACGTR 1 cut(s) 939
BsaBI GATNNNNATC 3 cut(s) 103, 443, 1158
BsaHI GRCGYC 1 cut(s) 661
BsaJI CCNNGG 2 cut(s) 405, 776
BsaWI WCCGGW 5 cut(s) 46, 60, 81, 197, 877
BsaXI ACNNNNNCTCC 2 cut(s) 260, 290
Bse118I RCCGGY 6 cut(s) 46, 67, 88, 109, 197, 877
Bse1I ACTGG 2 cut(s) 128, 381
Bse8I GATNNNNATC 3 cut(s) 103, 443, 1158
BseBI CCWGG 1 cut(s) 240
BseDI CCNNGG 2 cut(s) 405, 776
BseGI GGATG 1 cut(s) 512
BseJI GATNNNNATC 3 cut(s) 103, 443, 1158
BseMII CTCAG 2 cut(s) 725, 908
BseNI ACTGG 2 cut(s) 128, 381
BseRI GAGGAG 4 cut(s) 274, 743, 986, 1007
BseX3I CGGCCG 2 cut(s) 69, 90
Bsh1236I CGCG 1 cut(s) 267
Bsh1285I CGRYCG 3 cut(s) 72, 93, 579
BshFI GGCC 4 cut(s) 71, 92, 410, 451
BshNI GGYRCC 1 cut(s) 874
BshTI ACCGGT 3 cut(s) 46, 197, 877
BsiEI CGRYCG 3 cut(s) 72, 93, 579
BsiHKCI CYCGRG 1 cut(s) 404
BslFI GGGAC 3 cut(s) 38, 610, 758
BsmAI GTCTC 1 cut(s) 592
BsmBI CGTCTC 1 cut(s) 592
BsmFI GGGAC 3 cut(s) 38, 610, 758
BsmI GAATGC 1 cut(s) 1051
BsnI GGCC 4 cut(s) 71, 92, 410, 451
BsoBI CYCGRG 1 cut(s) 404
Bsp119I TTCGAA 2 cut(s) 330, 560
Bsp143I GATC 7 cut(s) 41, 104, 334, 438, 511, 904, 1159
BspACI CCGC 4 cut(s) 72, 93, 265, 1163
BspANI GGCC 4 cut(s) 71, 92, 410, 451
BspCNI CTCAG 2 cut(s) 726, 907
BspFNI CGCG 1 cut(s) 267
BspLI GGNNCC 3 cut(s) 263, 598, 876
BspPI GGATC 1 cut(s) 1154
BspQI GCTCTTC 1 cut(s) 750
BspT104I TTCGAA 2 cut(s) 330, 560
BspT107I GGYRCC 1 cut(s) 874
BsrFI RCCGGY 6 cut(s) 46, 67, 88, 109, 197, 877
BsrI ACTGG 2 cut(s) 128, 381
BssAI RCCGGY 6 cut(s) 46, 67, 88, 109, 197, 877
BssECI CCNNGG 2 cut(s) 405, 776
BssMI GATC 7 cut(s) 41, 104, 334, 438, 511, 904, 1159
BssNI GRCGYC 1 cut(s) 661
Bst2UI CCWGG 1 cut(s) 240
Bst4CI ACNGT 4 cut(s) 139, 311, 573, 601
Bst6I CTCTTC 3 cut(s) 720, 750, 995
BstACI GRCGYC 1 cut(s) 661
BstBAI YACGTR 1 cut(s) 939
BstBI TTCGAA 2 cut(s) 330, 560
BstC8I GCNNGC 1 cut(s) 288
BstDEI CTNAG 4 cut(s) 359, 734, 894, 1050
BstDSI CCRYGG 1 cut(s) 776
BstEII GGTNACC 2 cut(s) 63, 84
BstF5I GGATG 1 cut(s) 512
BstFNI CGCG 1 cut(s) 267
BstKTI GATC 7 cut(s) 44, 107, 337, 441, 514, 907, 1162
BstMAI GTCTC 1 cut(s) 592
BstMBI GATC 7 cut(s) 41, 104, 334, 438, 511, 904, 1159
BstMCI CGRYCG 3 cut(s) 72, 93, 579
BstMWI GCNNNNNNNGC 3 cut(s) 416, 457, 1076
BstNI CCWGG 1 cut(s) 240
BstNSI RCATGY 1 cut(s) 891
BstPI GGTNACC 2 cut(s) 63, 84
BstSCI CCNGG 1 cut(s) 238
BstUI CGCG 1 cut(s) 267
BstV2I GAAGAC 1 cut(s) 950
BstXI CCANNNNNNTGG 1 cut(s) 544
BstZI CGGCCG 2 cut(s) 69, 90
BsuRI GGCC 4 cut(s) 71, 92, 410, 451
BtgI CCRYGG 1 cut(s) 776
BtsCI GGATG 1 cut(s) 512
BtsIMutI CAGTG 3 cut(s) 121, 144, 902
Cac8I GCNNGC 1 cut(s) 288
Cfr10I RCCGGY 6 cut(s) 46, 67, 88, 109, 197, 877
Cfr13I GGNCC 2 cut(s) 449, 597
Csp6I GTAC 3 cut(s) 301, 430, 875
CspAI ACCGGT 3 cut(s) 46, 197, 877
CspCI CAANNNNNGTGG 2 cut(s) 237, 272
CviAII CATG 5 cut(s) 544, 607, 888, 1021, 1105
CviQI GTAC 3 cut(s) 301, 430, 875
DdeI CTNAG 4 cut(s) 359, 734, 894, 1050
DpnI GATC 7 cut(s) 43, 106, 336, 440, 513, 906, 1161
DpnII GATC 7 cut(s) 41, 104, 334, 438, 511, 904, 1159
DraIII CACNNNGTG 1 cut(s) 836
EaeI YGGCCR 2 cut(s) 69, 90
EagI CGGCCG 2 cut(s) 69, 90
Eam1104I CTCTTC 3 cut(s) 720, 750, 995
EarI CTCTTC 3 cut(s) 720, 750, 995
EclXI CGGCCG 2 cut(s) 69, 90
Eco147I AGGCCT 1 cut(s) 410
Eco32I GATATC 1 cut(s) 181
Eco47I GGWCC 1 cut(s) 597
Eco52I CGGCCG 2 cut(s) 69, 90
Eco72I CACGTG 1 cut(s) 939
Eco88I CYCGRG 1 cut(s) 404
Eco91I GGTNACC 2 cut(s) 63, 84
EcoO65I GGTNACC 2 cut(s) 63, 84
EcoRI GAATTC 2 cut(s) 556, 844
EcoRII CCWGG 1 cut(s) 238
EcoRV GATATC 1 cut(s) 181
Esp3I CGTCTC 1 cut(s) 592
FaeI CATG 5 cut(s) 547, 610, 891, 1024, 1108
FaqI GGGAC 3 cut(s) 38, 610, 758
FatI CATG 5 cut(s) 543, 606, 887, 1020, 1104
Fnu4HI GCNGC 4 cut(s) 72, 93, 265, 1166
FokI GGATG 1 cut(s) 519
Fsp4HI GCNGC 4 cut(s) 72, 93, 265, 1166
FspBI CTAG 2 cut(s) 398, 752
GluI GCNGC 4 cut(s) 72, 93, 265, 1166
HaeIII GGCC 4 cut(s) 71, 92, 410, 451
Hin1I GRCGYC 1 cut(s) 661
Hin1II CATG 5 cut(s) 547, 610, 891, 1024, 1108
HindIII AAGCTT 1 cut(s) 850
HphI GGTGA 9 cut(s) 36, 57, 78, 99, 391, 688, 778, 964, 1001
Hpy166II GTNNAC 3 cut(s) 382, 583, 900
Hpy188I TCNGA 6 cut(s) 41, 104, 443, 493, 506, 1102
Hpy188III TCNNGA 5 cut(s) 187, 520, 657, 1010, 1031
Hpy8I GTNNAC 3 cut(s) 382, 583, 900
HpyAV CCTTC 7 cut(s) 281, 289, 698, 707, 819, 1035, 1082
HpyCH4III ACNGT 4 cut(s) 139, 311, 573, 601
HpyCH4IV ACGT 4 cut(s) 386, 585, 661, 938
HpyCH4V TGCA 5 cut(s) 227, 395, 638, 912, 920
HpyF10VI GCNNNNNNNGC 3 cut(s) 416, 457, 1076
HpyF3I CTNAG 4 cut(s) 359, 734, 894, 1050
HpySE526I ACGT 4 cut(s) 386, 585, 661, 938
Hsp92I GRCGYC 1 cut(s) 661
Hsp92II CATG 5 cut(s) 547, 610, 891, 1024, 1108
KpnI GGTACC 1 cut(s) 878
Kzo9I GATC 7 cut(s) 41, 104, 334, 438, 511, 904, 1159
LguI GCTCTTC 1 cut(s) 750
LmnI GCTCC 2 cut(s) 261, 730
LweI GCATC 2 cut(s) 382, 497
MaeI CTAG 2 cut(s) 398, 752
MaeII ACGT 4 cut(s) 386, 585, 661, 938
MaeIII GTNAC 3 cut(s) 63, 84, 826
MalI GATC 7 cut(s) 43, 106, 336, 440, 513, 906, 1161
MboI GATC 7 cut(s) 41, 104, 334, 438, 511, 904, 1159
MboII GAAGA 9 cut(s) 17, 344, 734, 737, 767, 955, 1012, 1072, 1148
MlyI GAGTC 2 cut(s) 45, 304
MmeI TCCRAC 1 cut(s) 321
MroXI GAANNNNTTC 1 cut(s) 386
MseI TTAA 2 cut(s) 413, 455
MslI CAYNNNNRTG 2 cut(s) 377, 542
MspR9I CCNGG 1 cut(s) 240
Mva1269I GAATGC 1 cut(s) 1051
MvaI CCWGG 1 cut(s) 240
MvnI CGCG 1 cut(s) 267
MwoI GCNNNNNNNGC 3 cut(s) 416, 457, 1076
NdeII GATC 7 cut(s) 41, 104, 334, 438, 511, 904, 1159
NlaIII CATG 5 cut(s) 547, 610, 891, 1024, 1108
NlaIV GGNNCC 3 cut(s) 263, 598, 876
NmuCI GTSAC 3 cut(s) 63, 84, 826
NspI RCATGY 1 cut(s) 891
NspV TTCGAA 2 cut(s) 330, 560
PceI AGGCCT 1 cut(s) 410
PciSI GCTCTTC 1 cut(s) 750
PctI GAATGC 1 cut(s) 1051
PdmI GAANNNNTTC 1 cut(s) 386
PfeI GAWTC 8 cut(s) 57, 78, 99, 444, 485, 533, 619, 653
PflMI CCANNNNNTGG 1 cut(s) 123
PinAI ACCGGT 3 cut(s) 46, 197, 877
PkrI GCNGC 4 cut(s) 73, 94, 266, 1167
PleI GAGTC 2 cut(s) 44, 303
PmaCI CACGTG 1 cut(s) 939
PmlI CACGTG 1 cut(s) 939
PpsI GAGTC 2 cut(s) 44, 303
Ppu21I YACGTR 1 cut(s) 939
Psp6I CCWGG 1 cut(s) 238
PspCI CACGTG 1 cut(s) 939
PspEI GGTNACC 2 cut(s) 63, 84
PspGI CCWGG 1 cut(s) 238
PspN4I GGNNCC 3 cut(s) 263, 598, 876
PspPI GGNCC 2 cut(s) 449, 597
RsaI GTAC 3 cut(s) 302, 431, 876
RsaNI GTAC 3 cut(s) 301, 430, 875
RseI CAYNNNNRTG 2 cut(s) 377, 542
SapI GCTCTTC 1 cut(s) 750
SaqAI TTAA 2 cut(s) 413, 455
SatI GCNGC 4 cut(s) 72, 93, 265, 1166
Sau3AI GATC 7 cut(s) 41, 104, 334, 438, 511, 904, 1159
Sau96I GGNCC 2 cut(s) 449, 597
SchI GAGTC 2 cut(s) 45, 304
ScrFI CCNGG 1 cut(s) 240
SfaNI GCATC 2 cut(s) 382, 497
SfuI TTCGAA 2 cut(s) 330, 560
SinI GGWCC 1 cut(s) 597
SmiMI CAYNNNNRTG 2 cut(s) 377, 542
SseBI AGGCCT 1 cut(s) 410
SsiI CCGC 4 cut(s) 72, 93, 265, 1163
SspMI CTAG 2 cut(s) 398, 752
StuI AGGCCT 1 cut(s) 410
StyD4I CCNGG 1 cut(s) 238
TaaI ACNGT 4 cut(s) 139, 311, 573, 601
TaiI ACGT 4 cut(s) 389, 588, 664, 941
TaqI TCGA 8 cut(s) 144, 293, 330, 390, 423, 560, 1152, 1158
TaqII GACCGA 1 cut(s) 565
TatI WGTACW 1 cut(s) 429
TauI GCSGC 3 cut(s) 74, 95, 267
TfiI GAWTC 8 cut(s) 57, 78, 99, 444, 485, 533, 619, 653
Tru1I TTAA 2 cut(s) 413, 455
Tru9I TTAA 2 cut(s) 413, 455
TscAI CASTG 3 cut(s) 128, 144, 902
TseFI GTSAC 3 cut(s) 63, 84, 826
TseI GCWGC 1 cut(s) 1165
Tsp45I GTSAC 3 cut(s) 63, 84, 826
TspDTI ATGAA 2 cut(s) 477, 1121
TspGWI ACGGA 3 cut(s) 288, 654, 714
TspRI CASTG 3 cut(s) 128, 144, 902
Van91I CCANNNNNTGG 1 cut(s) 123
VpaK11BI GGWCC 1 cut(s) 597
XapI RAATTY 4 cut(s) 556, 844, 1063, 1108
XceI RCATGY 1 cut(s) 891
XcmI CCANNNNNNNNNTGG 1 cut(s) 622
XmnI GAANNNNTTC 1 cut(s) 386
XspI CTAG 2 cut(s) 398, 752
ZraI GACGTC 1 cut(s) 662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.