Rh4AG175200

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000585
Physical Location & Seq
Reverse (-)
43979315 .. 43996431
17117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG175200.1

Sequence Viewer

Length: 2403 bp
ATGGGGTTAGAGGTCCAGTTGGAGCCGGCTTTCGGCCAGCTCTCGGTTGAGCGGGCGGTTATGGGCTCAACTCCGCCGCAACGTCAATTCTTGTTCCACCTTCATGCGCCGGATTCTTTGCACCTCGGAATCCATGTCACTGATTTCCACTCTAATACGTGGGAGGCTGTACGGTCGGTTAGTCAGCTAGATGATATGCAGGACAGCATTGGAATAGGAGGCACTTGGTCAGAGTTCATAGACTATCTTGTCAATTCCATAAAATCTGAGCATACAAAGCTTGTTTTGGAGGGACCGTTAAACTCAGATGGCGCTGCAGCTGCAAAGTTAGTTGCTCAGAAGGCTAAAGGAATGCCTAAAATTTCCATTGCCATGACAAAGCTTGTGGGCTCGGCTGCTACTGAGGCTATTGCAAATCTCTCTCTTCAGCTCTTCAAAGAGTTCAAAAGCATCAACGAGTCTTATGTAGAAGAACGTGAGCGGTCTATGCAATTGTCCAAAGTGGTATCAGCAGAAAAGGAAAGAAACGACAGCATCCAGAGCCAACTTGAGCTGTATACTAAGAGGCAAAAGATACAAAGGATTGGTTCTTCGGACATTAATGGCGCACAAAACTCTCCAGAAAAACAAGCCACTAGAGATACAAAATCAACAAAAGTTGTCAATCGGGTCGTGCCTGCATATCGCAGGGCAAAACTCACCAATCTATTATATTTTCGTAACACGCAACTAATCCGAGCTCCAGCGCGCGCCTCCATATCCGCAACCACCGCCATGACGCAACACCGCTTCATTATGGTAACATTTCCCACTCAAGGCCACATCAATCCTTCCCTCCAATTCGCCAAGCGTCTCATTCGCATCACCGGTGTACATGTAACGTTTGTCACGTCCCTCTCCGCCCACCACCGCATTGGCAATAGCATTAGTACTCCTAGTGGCTTGACCTTCGCCCCCTTTTCCGACGGATATGACCAAGGTTTAAAGTCCGGGGACGATCTTCAGCACTTCATGTCCGAGCTAAAGCGTCGTGGCAAGCAAGCGATCACGGATCTTGTAGTGTCTAGTGCAAGCGAGGGCCACCCATACACTTGCCTATTGTTCGCCTTACTTCTTCCTTGGGTGGCGGAACTGGCACGTGAACTCCACCTCGCAACCGCGCTCCTTTGGATTCAGCCAGCCACAGTTTTCGACATATACTACTACTACTTCAACGGCTACAAAGATCTCATCAACAACAATACTGCTGCCGATAGTGACCCTTCCTATACAGTAGAAATACCAGGATTGCCGCTAGCGCTGAAGAGCCGCGACCTTCCTTCTTTCATTGTTGCTACGAATCCGTACAACGGAGCTGTCCAATTGTTCGAAGAACAGTTCGAGAAGCTCGGACAAGAAAGCAGGCCAATCATACTAGTGAACACGTTTGATGCACTAGAACCGGAGGCGTTAAAAGCAATAGACAGGTACAACTTGATCGGAATCGGGCCTTTAATGCCATCGGCTTTCTTGGACGGCAAGGACCCGTCCGATAAATCATTCGGAGGCGATCTTTTCCAGAAGTCGAAGGAGTCACCGTACCTGGAATGGCTGAACTCAAAGCCAAAAGAGTCTGTCGTCTACGTCTCGTTTGGGAGCATTTCCGTCCTGTCCAAGATTCAAATGGAGGAAATTGCAAAAGGGTTGTTGGATTCCGGACGTCCGTTTCTGTGGGTGATTAGAGAAAACCAAAAGAGTGGACAAGGTAAGGAAGAGAAAGAAGACGATGAGCTGATTTACAGAGAGGAACTAGAAGAGCTTGGGATGATAGTCCCGTGGTGTAGTCAAGTGGAGGTTCTTTCGAATCCTTCATTGGGTTGTTTTGTGACACATTGTGGGTGGAATTCAAGCCTGGAGAGTTTGGTTTGTGGGGTACCAGTGGTGGCATTTCCCCAGTGGACAGACCAAGGCACAAATGCCAAGTTGATAGAGGACATGTGGAAAACAGGGGTGAGGGTAGCACCGAATGCGGAGGGTGTTATTGTGGGTGAGGAGCTCAAGAGGTGTCTGGATTTGGTTATGGGAAGTGAAGAGTTGAGAAGCAATGCTAAGAAATGGAAGGAGTTGGCAAGAGAGGCTGTGAGTGAAGGTGGATCTTCCGATAACAATCTCAAGGCATTTTTGGATGACATTGGACGAGAAAAGAGCACCCAAGAAGGCAAAAACACACATGCCAAGAAGCGAAACCCCAAATTTCCATCACTTTCTGGTCAGACTGTGATTGAAATGGGTCAAGGTCAATCGTGTAAGCATCATCAATGGAAGACAAAACAAGTATTTGTTGCAAAGAATACTGAGCAAGTGGATACGGGAAAGAAGATGGTTGTTGCTCCTATGCCAAGTGTGAATGCAGATGCTAGATAG

Protein Analysis

800

Amino Acids

88.77

Weight (kDa)

6.45

Isoelectric Point (pI)

38.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 528 - 696 3.7e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000585)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15550
fragaria_vesca FvH4_4g13000 FvH4_4g13010 FvH4_4g13020
malus_domestica MD04G1019300.v1.1 MD04G1019400.v1.1 MD04G1019500.v1.1 MD04G1019600.v1.1 MD04G1019700.v1.1
prunus_persica Prupe.1G169100_v2.0.a1 Prupe.1G169200_v2.0.a1 Prupe.1G169300_v2.0.a1
pyrus_communis pycom04g01550 pycom04g01560 pycom04g01580 pycom12g16570
rosa_chinensis RchiOBHm_Chr4g0412431 RchiOBHm_Chr4g0412441 RchiOBHm_Chr4g0412481 RchiOBHm_Chr4g0412491 RchiOBHm_Chr4g0412501 RchiOBHm_Chr4g0412731 RchiOBHm_Chr4g0412741
rosa_laevigata RLG00000008262 RLG00000008264 RLG00000008266 RLG00000008267 RLG00000008285 RLG00000008286 RLG00000008299 RLG00000008300
rosa_multiflora Rmu_co8207190.1_g000001 Rmu_co8436959.1_g000001 Rmu_co8466533.1_g000001 Rmu_sc0001238.1_g000017 Rmu_sc0001238.1_g000019 Rmu_sc0001238.1_g000022 Rmu_sc0001238.1_g000027 Rmu_sc0001238.1_g000036 Rmu_sc0003914.1_g000013 Rmu_sc0005615.1_g000006 Rmu_sc0008191.1_g000017
rosa_roxburghii Rroxscaffold_161G00448030 Rroxscaffold_161G00448050 Rroxscaffold_5G00356580 Rroxscaffold_5G00356640 Rroxscaffold_5G00356700 Rroxscaffold_5G00356890 Rroxscaffold_5G00356930 Rroxscaffold_5G00356960
rosa_rugosa Rorug04G0103500 Rorug04G0103600.1 Rorug04G0103800.1 Rorug04G0103900.1 Rorug04G0116000 Rorug04G0116000 Rorug04G0116000 Rorug04G0116300
rosa_samantha Rh4AG173100 Rh4AG173400 Rh4AG175100 Rh4AG175200 Rh4BG172800 Rh4BG174400 Rh4BG174700 Rh4BG174800 Rh4CG183800 Rh4CG183900 Rh4CG184400 Rh4CG186100 Rh4DG168100 Rh4DG168800 Rh4DG171000 Rh4DG171200 Rh4DG171800 Rh4DG171900
rosa_wichuraiana Rw0G007780 Rw4G014480 Rw4G014670 Rw4G014680 Rw4G014700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 248
AatII GACGTC 1 cut(s) 1702
Acc65I GGTACC 1 cut(s) 1912
AccB1I GGYRCC 1 cut(s) 1912
AccBSI CCGCTC 2 cut(s) 52, 481
AccI GTMKAC 2 cut(s) 557, 1620
AccII CGCG 4 cut(s) 748, 750, 1160, 1311
AccIII TCCGGA 1 cut(s) 1694
AclI AACGTT 1 cut(s) 881
AclWI GGATC 2 cut(s) 1059, 2140
AcoI YGGCCR 1 cut(s) 34
AcsI RAATTY 3 cut(s) 360, 1882, 2231
AcuI CTGAAG 3 cut(s) 410, 986, 1322
AcvI CACGTG 1 cut(s) 1139
AcyI GRCGYC 1 cut(s) 1699
AdeI CACNNNGTG 1 cut(s) 1874
AfaI GTAC 7 cut(s) 171, 873, 931, 1346, 1469, 1580, 1914
AfeI AGCGCT 1 cut(s) 1299
AfiI CCNNNNNNNGG 5 cut(s) 32, 43, 815, 1349, 1853
AflIII ACRYGT 3 cut(s) 874, 1422, 1974
AgeI ACCGGT 1 cut(s) 866
AgsI TTSAA 6 cut(s) 436, 445, 1213, 1661, 1887, 2264
AhlI ACTAGT 1 cut(s) 1414
AjiI CACGTC 1 cut(s) 891
AjnI CCWGG 3 cut(s) 1282, 1581, 1890
AjuI GAANNNNNNNTTGG 2 cut(s) 1835, 1867
Alw21I GWGCWC 3 cut(s) 742, 2037, 2189
Alw26I GTCTC 2 cut(s) 857, 1630
AlwI GGATC 2 cut(s) 1059, 2140
Aor13HI TCCGGA 1 cut(s) 1694
Aor51HI AGCGCT 1 cut(s) 1299
AoxI GGCC 5 cut(s) 34, 817, 1078, 1403, 1487
ApeKI GCWGC 5 cut(s) 314, 317, 320, 395, 1247
ApoI RAATTY 3 cut(s) 360, 1882, 2231
AseI ATTAAT 1 cut(s) 600
AsiGI ACCGGT 1 cut(s) 866
Asp718I GGTACC 1 cut(s) 1912
AspLEI GCGC 8 cut(s) 109, 314, 608, 748, 750, 752, 1162, 1300
AspS9I GGNCC 5 cut(s) 13, 293, 1078, 1487, 1522
AsuC2I CCSGG 1 cut(s) 991
AsuHPI GGTGA 6 cut(s) 691, 856, 1566, 1726, 2002, 2039
AsuII TTCGAA 2 cut(s) 1368, 1841
AsuNHI GCTAGC 1 cut(s) 1294
AvaII GGWCC 3 cut(s) 13, 293, 1522
BanI GGYRCC 1 cut(s) 1912
BanII GRGCYC 4 cut(s) 68, 392, 742, 2037
BbrPI CACGTG 1 cut(s) 1139
BbsI GAAGAC 2 cut(s) 1767, 2309
Bbv12I GWGCWC 3 cut(s) 742, 2037, 2189
BbvI GCAGC 5 cut(s) 301, 307, 329, 382, 1234
BccI CCATC 4 cut(s) 302, 1507, 2245, 2353
BceAI ACGGC 2 cut(s) 1231, 1531
BciT130I CCWGG 3 cut(s) 1284, 1583, 1892
BciVI GTATCC 1 cut(s) 2338
BcnI CCSGG 1 cut(s) 991
BcoDI GTCTC 2 cut(s) 857, 1630
BcuI ACTAGT 1 cut(s) 1414
BfaI CTAG 9 cut(s) 188, 636, 936, 1065, 1295, 1415, 1436, 1790, 2397
BfmI CTRYAG 1 cut(s) 315
BfoI RGCGCY 2 cut(s) 315, 1301
BfuI GTATCC 1 cut(s) 2338
BglII AGATCT 1 cut(s) 1225
BisI GCNGC 8 cut(s) 77, 315, 318, 321, 396, 1248, 1292, 1309
BlsI GCNGC 8 cut(s) 78, 316, 319, 322, 397, 1249, 1293, 1310
BmcAI AGTACT 1 cut(s) 931
Bme1390I CCNGG 4 cut(s) 991, 1284, 1583, 1892
Bme18I GGWCC 3 cut(s) 13, 293, 1522
BmgBI CACGTC 1 cut(s) 891
BmgT120I GGNCC 5 cut(s) 13, 293, 1078, 1487, 1522
BmiI GGNNCC 4 cut(s) 24, 294, 1524, 1914
BmrFI CCNGG 4 cut(s) 991, 1284, 1583, 1892
BmrI ACTGGG 1 cut(s) 1927
BmsI GCATC 6 cut(s) 459, 543, 870, 1420, 2299, 2383
BmtI GCTAGC 1 cut(s) 1298
BmuI ACTGGG 1 cut(s) 1927
BpiI GAAGAC 2 cut(s) 1767, 2309
BpmI CTGGAG 3 cut(s) 603, 726, 1913
Bpu14I TTCGAA 2 cut(s) 1368, 1841
BpuEI CTTGAG 4 cut(s) 569, 798, 2021, 2135
BpuMI CCSGG 1 cut(s) 991
BsaAI YACGTR 2 cut(s) 159, 1139
BsaBI GATNNNNATC 2 cut(s) 1481, 2145
BsaHI GRCGYC 1 cut(s) 1699
BsaJI CCNNGG 6 cut(s) 124, 976, 990, 1118, 1814, 1945
BsaWI WCCGGW 3 cut(s) 866, 1441, 1694
BsaXI ACNNNNNCTCC 6 cut(s) 281, 311, 1128, 1158, 1562, 1592
Bsc4I CCNNNNNNNGG 5 cut(s) 32, 43, 815, 1349, 1853
Bse118I RCCGGY 2 cut(s) 25, 866
Bse1I ACTGG 4 cut(s) 16, 1137, 1916, 1933
Bse3DI GCAATG 2 cut(s) 366, 2089
Bse8I GATNNNNATC 2 cut(s) 1481, 2145
BseAI TCCGGA 1 cut(s) 1694
BseBI CCWGG 3 cut(s) 1284, 1583, 1892
BseDI CCNNGG 6 cut(s) 124, 976, 990, 1118, 1814, 1945
BseGI GGATG 3 cut(s) 534, 1809, 2170
BseJI GATNNNNATC 2 cut(s) 1481, 2145
BseLI CCNNNNNNNGG 5 cut(s) 32, 43, 815, 1349, 1853
BseMI GCAATG 2 cut(s) 366, 2089
BseMII CTCAG 5 cut(s) 258, 318, 350, 393, 2325
BseNI ACTGG 4 cut(s) 16, 1137, 1916, 1933
BsePI GCGCGC 2 cut(s) 746, 748
BseRI GAGGAG 1 cut(s) 2045
BseXI GCAGC 5 cut(s) 301, 307, 329, 382, 1234
Bsh1236I CGCG 4 cut(s) 748, 750, 1160, 1311
Bsh1285I CGRYCG 1 cut(s) 176
BshFI GGCC 5 cut(s) 36, 819, 1080, 1405, 1489
BshNI GGYRCC 1 cut(s) 1912
BshTI ACCGGT 1 cut(s) 866
BsiEI CGRYCG 1 cut(s) 176
BsiHKAI GWGCWC 3 cut(s) 742, 2037, 2189
BsiSI CCGG 6 cut(s) 26, 110, 867, 990, 1442, 1695
BslFI GGGAC 4 cut(s) 306, 877, 1007, 1796
BslI CCNNNNNNNGG 5 cut(s) 32, 43, 815, 1349, 1853
BsmAI GTCTC 2 cut(s) 857, 1630
BsmBI CGTCTC 2 cut(s) 857, 1630
BsmFI GGGAC 4 cut(s) 306, 877, 1007, 1796
BsmI GAATGC 3 cut(s) 357, 2011, 2392
BsnI GGCC 5 cut(s) 36, 819, 1080, 1405, 1489
Bsp119I TTCGAA 2 cut(s) 1368, 1841
Bsp1286I GDGCHC 5 cut(s) 68, 392, 742, 2037, 2189
Bsp13I TCCGGA 1 cut(s) 1694
Bsp1407I TGTACA 1 cut(s) 871
Bsp143I GATC 7 cut(s) 997, 1044, 1051, 1225, 1476, 1549, 2132
BspANI GGCC 5 cut(s) 36, 819, 1080, 1405, 1489
BspCNI CTCAG 5 cut(s) 259, 317, 349, 394, 2326
BspEI TCCGGA 1 cut(s) 1694
BspFNI CGCG 4 cut(s) 748, 750, 1160, 1311
BspLI GGNNCC 4 cut(s) 24, 294, 1524, 1914
BspMAI CTGCAG 1 cut(s) 319
BspOI GCTAGC 1 cut(s) 1298
BspPI GGATC 2 cut(s) 1059, 2140
BspQI GCTCTTC 3 cut(s) 437, 1298, 1788
BspT104I TTCGAA 2 cut(s) 1368, 1841
BspT107I GGYRCC 1 cut(s) 1912
BsrBI CCGCTC 2 cut(s) 52, 481
BsrDI GCAATG 2 cut(s) 366, 2089
BsrFI RCCGGY 2 cut(s) 25, 866
BsrGI TGTACA 1 cut(s) 871
BsrI ACTGG 4 cut(s) 16, 1137, 1916, 1933
BssAI RCCGGY 2 cut(s) 25, 866
BssECI CCNNGG 6 cut(s) 124, 976, 990, 1118, 1814, 1945
BssHII GCGCGC 2 cut(s) 746, 748
BssMI GATC 7 cut(s) 997, 1044, 1051, 1225, 1476, 1549, 2132
BssNAI GTATAC 1 cut(s) 558
BssNI GRCGYC 1 cut(s) 1699
BssT1I CCWWGG 3 cut(s) 976, 1118, 1945
Bst1107I GTATAC 1 cut(s) 558
Bst2UI CCWGG 3 cut(s) 1284, 1583, 1892
Bst4CI ACNGT 7 cut(s) 174, 297, 1186, 1273, 1377, 1578, 2257
Bst6I CTCTTC 6 cut(s) 429, 437, 1298, 1746, 1788, 2064
BstACI GRCGYC 1 cut(s) 1699
BstAPI GCANNNNNTGC 1 cut(s) 2006
BstAUI TGTACA 1 cut(s) 871
BstBAI YACGTR 2 cut(s) 159, 1139
BstBI TTCGAA 2 cut(s) 1368, 1841
BstDEI CTNAG 7 cut(s) 267, 304, 336, 402, 561, 2088, 2334
BstDSI CCRYGG 1 cut(s) 1814
BstF5I GGATG 3 cut(s) 534, 1809, 2170
BstFNI CGCG 4 cut(s) 748, 750, 1160, 1311
BstH2I RGCGCY 2 cut(s) 315, 1301
BstHHI GCGC 8 cut(s) 109, 314, 608, 748, 750, 752, 1162, 1300
BstKTI GATC 7 cut(s) 1000, 1047, 1054, 1228, 1479, 1552, 2135
BstMAI GTCTC 2 cut(s) 857, 1630
BstMBI GATC 7 cut(s) 997, 1044, 1051, 1225, 1476, 1549, 2132
BstMCI CGRYCG 1 cut(s) 176
BstNI CCWGG 3 cut(s) 1284, 1583, 1892
BstNSI RCATGY 3 cut(s) 878, 1978, 2213
BstSCI CCNGG 4 cut(s) 989, 1282, 1581, 1890
BstSFI CTRYAG 1 cut(s) 315
BstUI CGCG 4 cut(s) 748, 750, 1160, 1311
BstV1I GCAGC 5 cut(s) 301, 307, 329, 382, 1234
BstV2I GAAGAC 2 cut(s) 1767, 2309
BstX2I RGATCY 3 cut(s) 1051, 1225, 2132
BstXI CCANNNNNNTGG 2 cut(s) 914, 1736
BstYI RGATCY 3 cut(s) 1051, 1225, 2132
BstZ17I GTATAC 1 cut(s) 558
BsuI GTATCC 1 cut(s) 2338
BsuRI GGCC 5 cut(s) 36, 819, 1080, 1405, 1489
BtgI CCRYGG 1 cut(s) 1814
BtrI CACGTC 1 cut(s) 891
BtsCI GGATG 3 cut(s) 534, 1809, 2170
BtsIMutI CAGTG 3 cut(s) 138, 1923, 1940
CfoI GCGC 8 cut(s) 109, 314, 608, 748, 750, 752, 1162, 1300
Cfr10I RCCGGY 2 cut(s) 25, 866
Cfr13I GGNCC 5 cut(s) 13, 293, 1078, 1487, 1522
CseI GACGC 3 cut(s) 787, 839, 1016
Csp6I GTAC 7 cut(s) 170, 872, 930, 1345, 1468, 1579, 1913
CspAI ACCGGT 1 cut(s) 866
CspCI CAANNNNNGTGG 2 cut(s) 366, 401
CviAII CATG 8 cut(s) 104, 134, 373, 775, 875, 1012, 1975, 2210
CviQI GTAC 7 cut(s) 170, 872, 930, 1345, 1468, 1579, 1913
DdeI CTNAG 7 cut(s) 267, 304, 336, 402, 561, 2088, 2334
DpnI GATC 7 cut(s) 999, 1046, 1053, 1227, 1478, 1551, 2134
DpnII GATC 7 cut(s) 997, 1044, 1051, 1225, 1476, 1549, 2132
DraI TTTAAA 1 cut(s) 984
DraIII CACNNNGTG 1 cut(s) 1874
DrdI GACNNNNNNGTC 1 cut(s) 248
DseDI GACNNNNNNGTC 1 cut(s) 248
EaeI YGGCCR 1 cut(s) 34
Eam1104I CTCTTC 6 cut(s) 429, 437, 1298, 1746, 1788, 2064
EarI CTCTTC 6 cut(s) 429, 437, 1298, 1746, 1788, 2064
EciI GGCGGA 3 cut(s) 63, 889, 1142
Ecl136II GAGCTC 2 cut(s) 740, 2035
Eco130I CCWWGG 3 cut(s) 976, 1118, 1945
Eco24I GRGCYC 4 cut(s) 68, 392, 742, 2037
Eco47I GGWCC 3 cut(s) 13, 293, 1522
Eco47III AGCGCT 1 cut(s) 1299
Eco53kI GAGCTC 2 cut(s) 740, 2035
Eco57I CTGAAG 3 cut(s) 410, 986, 1322
Eco72I CACGTG 1 cut(s) 1139
EcoICRI GAGCTC 2 cut(s) 740, 2035
EcoO109I RGGNCCY 1 cut(s) 1522
EcoRI GAATTC 1 cut(s) 1882
EcoRII CCWGG 3 cut(s) 1282, 1581, 1890
EcoT14I CCWWGG 3 cut(s) 976, 1118, 1945
EcoT38I GRGCYC 4 cut(s) 68, 392, 742, 2037
ErhI CCWWGG 3 cut(s) 976, 1118, 1945
Esp3I CGTCTC 2 cut(s) 857, 1630
FaeI CATG 8 cut(s) 107, 137, 376, 778, 878, 1015, 1978, 2213
FaqI GGGAC 4 cut(s) 306, 877, 1007, 1796
FatI CATG 8 cut(s) 103, 133, 372, 774, 874, 1011, 1974, 2209
FauI CCCGC 1 cut(s) 45
FblI GTMKAC 2 cut(s) 557, 1620
Fnu4HI GCNGC 8 cut(s) 77, 315, 318, 321, 396, 1248, 1292, 1309
FokI GGATG 3 cut(s) 521, 1816, 2177
FriOI GRGCYC 4 cut(s) 68, 392, 742, 2037
Fsp4HI GCNGC 8 cut(s) 77, 315, 318, 321, 396, 1248, 1292, 1309
FspBI CTAG 9 cut(s) 188, 636, 936, 1065, 1295, 1415, 1436, 1790, 2397
GlaI GCGC 8 cut(s) 108, 313, 607, 747, 749, 751, 1161, 1299
GluI GCNGC 8 cut(s) 77, 315, 318, 321, 396, 1248, 1292, 1309
GsuI CTGGAG 3 cut(s) 603, 726, 1913
HaeII RGCGCY 2 cut(s) 315, 1301
HaeIII GGCC 5 cut(s) 36, 819, 1080, 1405, 1489
HapII CCGG 6 cut(s) 26, 110, 867, 990, 1442, 1695
HgaI GACGC 3 cut(s) 787, 839, 1016
HhaI GCGC 8 cut(s) 109, 314, 608, 748, 750, 752, 1162, 1300
Hin1I GRCGYC 1 cut(s) 1699
Hin1II CATG 8 cut(s) 107, 137, 376, 778, 878, 1015, 1978, 2213
Hin6I GCGC 8 cut(s) 107, 312, 606, 746, 748, 750, 1160, 1298
HinP1I GCGC 8 cut(s) 107, 312, 606, 746, 748, 750, 1160, 1298
HindIII AAGCTT 2 cut(s) 278, 380
HpaII CCGG 6 cut(s) 26, 110, 867, 990, 1442, 1695
HphI GGTGA 6 cut(s) 691, 856, 1566, 1726, 2002, 2039
Hpy166II GTNNAC 7 cut(s) 558, 872, 1142, 1420, 1621, 1739, 1938
Hpy188III TCNNGA 7 cut(s) 538, 620, 1381, 1558, 1695, 2038, 2048
Hpy8I GTNNAC 7 cut(s) 558, 872, 1142, 1420, 1621, 1739, 1938
Hpy99I CGWCG 2 cut(s) 968, 1032
HpyCH4III ACNGT 7 cut(s) 174, 297, 1186, 1273, 1377, 1578, 2257
HpyCH4IV ACGT 9 cut(s) 82, 158, 475, 881, 890, 1138, 1424, 1623, 1699
HpyF3I CTNAG 7 cut(s) 267, 304, 336, 402, 561, 2088, 2334
HpySE526I ACGT 9 cut(s) 82, 158, 475, 881, 890, 1138, 1424, 1623, 1699
Hsp92I GRCGYC 1 cut(s) 1699
Hsp92II CATG 8 cut(s) 107, 137, 376, 778, 878, 1015, 1978, 2213
HspAI GCGC 8 cut(s) 107, 312, 606, 746, 748, 750, 1160, 1298
Kpn2I TCCGGA 1 cut(s) 1694
KpnI GGTACC 1 cut(s) 1916
KroI GCCGGC 1 cut(s) 25
KroNI GCCGGC 1 cut(s) 27
Kzo9I GATC 7 cut(s) 997, 1044, 1051, 1225, 1476, 1549, 2132
LguI GCTCTTC 3 cut(s) 437, 1298, 1788
LmnI GCTCC 7 cut(s) 22, 745, 1167, 1352, 1635, 2032, 2374
Lsp1109I GCAGC 5 cut(s) 301, 307, 329, 382, 1234
LweI GCATC 6 cut(s) 459, 543, 870, 1420, 2299, 2383
MaeI CTAG 9 cut(s) 188, 636, 936, 1065, 1295, 1415, 1436, 1790, 2397
MaeII ACGT 9 cut(s) 82, 158, 475, 881, 890, 1138, 1424, 1623, 1699
MaeIII GTNAC 8 cut(s) 136, 719, 799, 877, 886, 1256, 1572, 1864
MalI GATC 7 cut(s) 999, 1046, 1053, 1227, 1478, 1551, 2134
MbiI CCGCTC 2 cut(s) 52, 481
MboI GATC 7 cut(s) 997, 1044, 1051, 1225, 1476, 1549, 2132
MfeI CAATTG 2 cut(s) 491, 1361
MflI RGATCY 3 cut(s) 1051, 1225, 2132
MhlI GDGCHC 5 cut(s) 68, 392, 742, 2037, 2189
MluCI AATT 9 cut(s) 86, 253, 360, 491, 839, 1361, 1671, 1882, 2231
MlyI GAGTC 3 cut(s) 467, 1580, 1619
MmeI TCCRAC 2 cut(s) 987, 1668
MroI TCCGGA 1 cut(s) 1694
MroNI GCCGGC 1 cut(s) 25
MseI TTAA 5 cut(s) 299, 600, 983, 1451, 1493
MslI CAYNNNNRTG 4 cut(s) 102, 371, 773, 1415
MspA1I CMGCKG 1 cut(s) 320
MspI CCGG 6 cut(s) 26, 110, 867, 990, 1442, 1695
MspR9I CCNGG 4 cut(s) 991, 1284, 1583, 1892
MunI CAATTG 2 cut(s) 491, 1361
Mva1269I GAATGC 3 cut(s) 357, 2011, 2392
MvaI CCWGG 3 cut(s) 1284, 1583, 1892
MvnI CGCG 4 cut(s) 748, 750, 1160, 1311
NaeI GCCGGC 1 cut(s) 27
NciI CCSGG 1 cut(s) 991
NdeII GATC 7 cut(s) 997, 1044, 1051, 1225, 1476, 1549, 2132
NgoMIV GCCGGC 1 cut(s) 25
NheI GCTAGC 1 cut(s) 1294
NlaIII CATG 8 cut(s) 107, 137, 376, 778, 878, 1015, 1978, 2213
NlaIV GGNNCC 4 cut(s) 24, 294, 1524, 1914
NmeAIII GCCGAG 1 cut(s) 371
NmuCI GTSAC 5 cut(s) 136, 886, 1256, 1572, 1864
NspI RCATGY 3 cut(s) 878, 1978, 2213
NspV TTCGAA 2 cut(s) 1368, 1841
PauI GCGCGC 2 cut(s) 746, 748
PciI ACATGT 2 cut(s) 874, 1974
PciSI GCTCTTC 3 cut(s) 437, 1298, 1788
PcsI WCGNNNNNNNCGW 1 cut(s) 887
PctI GAATGC 3 cut(s) 357, 2011, 2392
PdiI GCCGGC 1 cut(s) 27
PfeI GAWTC 8 cut(s) 113, 129, 1171, 1339, 1482, 1657, 1691, 1843
PinAI ACCGGT 1 cut(s) 866
PkrI GCNGC 8 cut(s) 78, 316, 319, 322, 397, 1249, 1293, 1310
PleI GAGTC 3 cut(s) 466, 1579, 1618
PmaCI CACGTG 1 cut(s) 1139
PmlI CACGTG 1 cut(s) 1139
PpsI GAGTC 3 cut(s) 466, 1579, 1618
Ppu21I YACGTR 2 cut(s) 159, 1139
PpuMI RGGWCCY 1 cut(s) 1522
PscI ACATGT 2 cut(s) 874, 1974
PshBI ATTAAT 1 cut(s) 600
Psp124BI GAGCTC 2 cut(s) 742, 2037
Psp1406I AACGTT 1 cut(s) 881
Psp5II RGGWCCY 1 cut(s) 1522
Psp6I CCWGG 3 cut(s) 1282, 1581, 1890
PspCI CACGTG 1 cut(s) 1139
PspGI CCWGG 3 cut(s) 1282, 1581, 1890
PspN4I GGNNCC 4 cut(s) 24, 294, 1524, 1914
PspPI GGNCC 5 cut(s) 13, 293, 1078, 1487, 1522
PspPPI RGGWCCY 1 cut(s) 1522
PstI CTGCAG 1 cut(s) 319
PsuI RGATCY 3 cut(s) 1051, 1225, 2132
PteI GCGCGC 2 cut(s) 746, 748
PvuII CAGCTG 1 cut(s) 320
RsaI GTAC 7 cut(s) 171, 873, 931, 1346, 1469, 1580, 1914
RsaNI GTAC 7 cut(s) 170, 872, 930, 1345, 1468, 1579, 1913
RseI CAYNNNNRTG 4 cut(s) 102, 371, 773, 1415
SacI GAGCTC 2 cut(s) 742, 2037
SapI GCTCTTC 3 cut(s) 437, 1298, 1788
SaqAI TTAA 5 cut(s) 299, 600, 983, 1451, 1493
SatI GCNGC 8 cut(s) 77, 315, 318, 321, 396, 1248, 1292, 1309
Sau3AI GATC 7 cut(s) 997, 1044, 1051, 1225, 1476, 1549, 2132
Sau96I GGNCC 5 cut(s) 13, 293, 1078, 1487, 1522
ScaI AGTACT 1 cut(s) 931
SchI GAGTC 3 cut(s) 467, 1580, 1619
ScrFI CCNGG 4 cut(s) 991, 1284, 1583, 1892
SduI GDGCHC 5 cut(s) 68, 392, 742, 2037, 2189
SfaNI GCATC 6 cut(s) 459, 543, 870, 1420, 2299, 2383
SfcI CTRYAG 1 cut(s) 315
SfuI TTCGAA 2 cut(s) 1368, 1841
SgrAI CRCCGGYG 1 cut(s) 866
SinI GGWCC 3 cut(s) 13, 293, 1522
SmiMI CAYNNNNRTG 4 cut(s) 102, 371, 773, 1415
SmlI CTYRAG 4 cut(s) 548, 813, 2036, 2150
SmoI CTYRAG 4 cut(s) 548, 813, 2036, 2150
SpeI ACTAGT 1 cut(s) 1414
Sse9I AATT 9 cut(s) 86, 253, 360, 491, 839, 1361, 1671, 1882, 2231
SspMI CTAG 9 cut(s) 188, 636, 936, 1065, 1295, 1415, 1436, 1790, 2397
SstI GAGCTC 2 cut(s) 742, 2037
StyD4I CCNGG 4 cut(s) 989, 1282, 1581, 1890
StyI CCWWGG 3 cut(s) 976, 1118, 1945
TaaI ACNGT 7 cut(s) 174, 297, 1186, 1273, 1377, 1578, 2257
TaiI ACGT 9 cut(s) 85, 161, 478, 884, 893, 1141, 1427, 1626, 1702
TaqI TCGA 5 cut(s) 1191, 1368, 1380, 1565, 1841
TasI AATT 9 cut(s) 86, 253, 360, 491, 839, 1361, 1671, 1882, 2231
TatI WGTACW 2 cut(s) 871, 929
TauI GCSGC 3 cut(s) 79, 1294, 1311
TfiI GAWTC 8 cut(s) 113, 129, 1171, 1339, 1482, 1657, 1691, 1843
Tru1I TTAA 5 cut(s) 299, 600, 983, 1451, 1493
Tru9I TTAA 5 cut(s) 299, 600, 983, 1451, 1493
TscAI CASTG 3 cut(s) 145, 1923, 1940
TseFI GTSAC 5 cut(s) 136, 886, 1256, 1572, 1864
TseI GCWGC 5 cut(s) 314, 317, 320, 395, 1247
Tsp45I GTSAC 5 cut(s) 136, 886, 1256, 1572, 1864
TspDTI ATGAA 6 cut(s) 92, 226, 781, 1000, 1315, 1839
TspGWI ACGGA 6 cut(s) 981, 1064, 1332, 1365, 1633, 1692
TspRI CASTG 3 cut(s) 145, 1923, 1940
VpaK11BI GGWCC 3 cut(s) 13, 293, 1522
VspI ATTAAT 1 cut(s) 600
XapI RAATTY 3 cut(s) 360, 1882, 2231
XceI RCATGY 3 cut(s) 878, 1978, 2213
XcmI CCANNNNNNNNNTGG 2 cut(s) 911, 1660
XmiI GTMKAC 2 cut(s) 557, 1620
XspI CTAG 9 cut(s) 188, 636, 936, 1065, 1295, 1415, 1436, 1790, 2397
ZraI GACGTC 1 cut(s) 1700
ZrmI AGTACT 1 cut(s) 931
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.