Rroxscaffold_5G00356960

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000585
Physical Location & Seq
Reverse (-)
36452237 .. 36454309
2073 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00356960.1

Sequence Viewer

Length: 1422 bp
ATGACGCAACACCGCTTCATTATGATAACATTTCCCACTCAAGGCCACATCAATCCTTCCCTCCAATTCGCCAAGCGTCTCATTCGCATCACCGGTGTACATGTAACGTTTGTCACGTCCCTCTCCGCCCACCACCGCATTGGCAATAGCATTAGTACTTCTAGTGGCTTGACCTTCGCCCCCTTTTCCGACGGATATGACCAAGGGTTAAAGTCCGGGGACGATCTTCAGCACTTCATGTCCGAGCTAAGGCGTCGTGGCAAGCAAGCGGTCACGGATCTTGTAGTGTCTAGTGCAAGCGAGGGCCACCCTTACACTTGCCTATTGTTCGCCTTACTTCTTCCTTGGGTGGCGGAACTGGCACGTGAACTCCACCTCCCAACCGCGCTCCTTTGGATTCAGCCAGCCACAGTTTTCGACATATACTACTACTACTTCAACGGCTACAAAGATCTCATCAACAACAATACTGCTGCTGATAGTGACCCTTCCTATGCAGTAGAAATACCAGGATTGCCGCTAGCGCTGAAGAGCCGCGACCTTCCTTCTTTCATTGTTGCTACGAATCCGTACAACGGAGTTGTCCAATTGTTCAAAGAACAGTTCGAGAAGCTCGGACAAGAAAGCAGGCCAATCATACTAGTGAACACGTTTGATGCACTAGAACCGGAGGCGTTAAAAGCAATAGACAGGTACAACTTGATTGGAATCGGGCCTTTAATGCCATCGGCTTTCTTGGACGGCAAGGACCCGGCCGATAAATCATTCGGAGGCGATCTTTTCCAGAAGTCGAAGGAGTCACCGTACCTGGAATGGCTGAACTCAAAGCCAAAAGAGTCTGTCGTCTACGTCTCGTTTGGGAGCATTTCCGTCCTGTCCAAGATTCAAATGGAGGAAATTGCAAAAGGATTGTTGGATTCGGGACATCCGTTTCTGTGGGTGATTAGAGAAAACCAAAAGAGTGGACAGGGTAAGGAAGAGAAAGAAGACGAGGAGCTGAGTTGCAGAGAGGAACTAGAAGAGCTTGGGATGATAGTCCCGTGGTGTAGTCAAGTGGAGGTTCTTTCGAATCCTTCATTGGGTTGTTTTGTGACACATTGTGGGTGGAATTCAAGCTTGGAGAGTTTGGTTTGTGCGGTACCAGTGGTGGCATTTCCCCAGTGGACAGACCAAGGCACAAATGCCAAGTTGATAGAGGACATGTGGAAAACAGGGGTGAGGGTAGCACCGAATGCGGAGGGTGTTGTTGTGGGTGAGGAGCTCAAGAGATGTCTGGATTTGGTCATGGGAAGTGAAGAGTTGAGAAGCAATGCTAAGAAATGGAAGGAGTTGGCAAGAGAGGCTGTGAGTGAAGGTGGATCTTCCGATAACAATCTCAAGGCATTTTTGGATGACATTGGACGTGGCTGTTTGCTAGCCTAA

Protein Analysis

473

Amino Acids

52.45

Weight (kDa)

5.18

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 270 - 438 2.4e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000585)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15550
fragaria_vesca FvH4_4g13000 FvH4_4g13010 FvH4_4g13020
malus_domestica MD04G1019300.v1.1 MD04G1019400.v1.1 MD04G1019500.v1.1 MD04G1019600.v1.1 MD04G1019700.v1.1
prunus_persica Prupe.1G169100_v2.0.a1 Prupe.1G169200_v2.0.a1 Prupe.1G169300_v2.0.a1
pyrus_communis pycom04g01550 pycom04g01560 pycom04g01580 pycom12g16570
rosa_chinensis RchiOBHm_Chr4g0412431 RchiOBHm_Chr4g0412441 RchiOBHm_Chr4g0412481 RchiOBHm_Chr4g0412491 RchiOBHm_Chr4g0412501 RchiOBHm_Chr4g0412731 RchiOBHm_Chr4g0412741
rosa_laevigata RLG00000008262 RLG00000008264 RLG00000008266 RLG00000008267 RLG00000008285 RLG00000008286 RLG00000008299 RLG00000008300
rosa_multiflora Rmu_co8207190.1_g000001 Rmu_co8436959.1_g000001 Rmu_co8466533.1_g000001 Rmu_sc0001238.1_g000017 Rmu_sc0001238.1_g000019 Rmu_sc0001238.1_g000022 Rmu_sc0001238.1_g000027 Rmu_sc0001238.1_g000036 Rmu_sc0003914.1_g000013 Rmu_sc0005615.1_g000006 Rmu_sc0008191.1_g000017
rosa_roxburghii Rroxscaffold_161G00448030 Rroxscaffold_161G00448050 Rroxscaffold_5G00356580 Rroxscaffold_5G00356640 Rroxscaffold_5G00356700 Rroxscaffold_5G00356890 Rroxscaffold_5G00356930 Rroxscaffold_5G00356960
rosa_rugosa Rorug04G0103500 Rorug04G0103600.1 Rorug04G0103800.1 Rorug04G0103900.1 Rorug04G0116000 Rorug04G0116000 Rorug04G0116000 Rorug04G0116300
rosa_samantha Rh4AG173100 Rh4AG173400 Rh4AG175100 Rh4AG175200 Rh4BG172800 Rh4BG174400 Rh4BG174700 Rh4BG174800 Rh4CG183800 Rh4CG183900 Rh4CG184400 Rh4CG186100 Rh4DG168100 Rh4DG168800 Rh4DG171000 Rh4DG171200 Rh4DG171800 Rh4DG171900
rosa_wichuraiana Rw0G007780 Rw4G014480 Rw4G014670 Rw4G014680 Rw4G014700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1138
AccB1I GGYRCC 1 cut(s) 1138
AccI GTMKAC 1 cut(s) 846
AccII CGCG 2 cut(s) 386, 537
AclI AACGTT 1 cut(s) 107
AclWI GGATC 2 cut(s) 285, 1366
AcoI YGGCCR 1 cut(s) 753
AcsI RAATTY 1 cut(s) 1108
AcuI CTGAAG 2 cut(s) 212, 548
AcvI CACGTG 1 cut(s) 365
AcyI GRCGYC 1 cut(s) 253
AdeI CACNNNGTG 1 cut(s) 1100
AfaI GTAC 6 cut(s) 99, 157, 572, 695, 806, 1140
AfeI AGCGCT 1 cut(s) 525
AfiI CCNNNNNNNGG 4 cut(s) 41, 249, 575, 1079
AflIII ACRYGT 3 cut(s) 100, 648, 1200
AgeI ACCGGT 1 cut(s) 92
AgsI TTSAA 4 cut(s) 439, 595, 887, 1113
AhlI ACTAGT 1 cut(s) 640
AjiI CACGTC 2 cut(s) 117, 1403
AjnI CCWGG 2 cut(s) 508, 807
AjuI GAANNNNNNNTTGG 4 cut(s) 1061, 1093, 1100, 1132
AloI GAACNNNNNNTCC 2 cut(s) 360, 392
AluBI AGCT 6 cut(s) 247, 613, 997, 1024, 1116, 1261
AluI AGCT 6 cut(s) 247, 613, 997, 1024, 1116, 1261
Alw21I GWGCWC 1 cut(s) 1263
Alw26I GTCTC 2 cut(s) 83, 856
AlwI GGATC 2 cut(s) 285, 1366
Aor51HI AGCGCT 1 cut(s) 525
AoxI GGCC 5 cut(s) 43, 304, 629, 713, 753
ApeKI GCWGC 1 cut(s) 473
ApoI RAATTY 1 cut(s) 1108
AsiGI ACCGGT 1 cut(s) 92
Asp718I GGTACC 1 cut(s) 1138
AspLEI GCGC 2 cut(s) 388, 526
AspS9I GGNCC 3 cut(s) 304, 713, 748
AsuC2I CCSGG 2 cut(s) 217, 752
AsuHPI GGTGA 5 cut(s) 82, 792, 952, 1228, 1265
AsuII TTCGAA 1 cut(s) 1067
AsuNHI GCTAGC 2 cut(s) 520, 1414
AvaII GGWCC 1 cut(s) 748
BanI GGYRCC 1 cut(s) 1138
BanII GRGCYC 1 cut(s) 1263
BbrPI CACGTG 1 cut(s) 365
BbsI GAAGAC 1 cut(s) 993
Bbv12I GWGCWC 1 cut(s) 1263
BbvI GCAGC 1 cut(s) 460
BccI CCATC 1 cut(s) 733
BceAI ACGGC 2 cut(s) 457, 757
BciT130I CCWGG 2 cut(s) 510, 809
BcnI CCSGG 2 cut(s) 217, 752
BcoDI GTCTC 2 cut(s) 83, 856
BcuI ACTAGT 1 cut(s) 640
BfaI CTAG 7 cut(s) 162, 291, 521, 641, 662, 1016, 1415
BfoI RGCGCY 1 cut(s) 527
BglII AGATCT 1 cut(s) 451
BisI GCNGC 3 cut(s) 474, 518, 535
BlsI GCNGC 3 cut(s) 475, 519, 536
BmcAI AGTACT 1 cut(s) 157
Bme1390I CCNGG 4 cut(s) 217, 510, 752, 809
Bme18I GGWCC 1 cut(s) 748
BmgBI CACGTC 2 cut(s) 117, 1403
BmgT120I GGNCC 3 cut(s) 304, 713, 748
BmiI GGNNCC 2 cut(s) 750, 1140
BmrFI CCNGG 4 cut(s) 217, 510, 752, 809
BmrI ACTGGG 1 cut(s) 1153
BmsI GCATC 2 cut(s) 96, 646
BmtI GCTAGC 2 cut(s) 524, 1418
BmuI ACTGGG 1 cut(s) 1153
BpiI GAAGAC 1 cut(s) 993
Bpu10I CCTNAGC 1 cut(s) 248
Bpu14I TTCGAA 1 cut(s) 1067
BpuEI CTTGAG 3 cut(s) 24, 1247, 1361
BpuMI CCSGG 2 cut(s) 217, 752
BsaAI YACGTR 1 cut(s) 365
BsaBI GATNNNNATC 2 cut(s) 707, 1371
BsaHI GRCGYC 1 cut(s) 253
BsaJI CCNNGG 5 cut(s) 202, 216, 344, 1040, 1171
BsaWI WCCGGW 2 cut(s) 92, 667
BsaXI ACNNNNNCTCC 6 cut(s) 354, 360, 384, 390, 788, 818
Bsc4I CCNNNNNNNGG 4 cut(s) 41, 249, 575, 1079
Bse118I RCCGGY 1 cut(s) 92
Bse1I ACTGG 3 cut(s) 363, 1142, 1159
Bse3DI GCAATG 1 cut(s) 1315
Bse8I GATNNNNATC 2 cut(s) 707, 1371
BseBI CCWGG 2 cut(s) 510, 809
BseDI CCNNGG 5 cut(s) 202, 216, 344, 1040, 1171
BseGI GGATG 3 cut(s) 925, 1035, 1396
BseJI GATNNNNATC 2 cut(s) 707, 1371
BseLI CCNNNNNNNGG 4 cut(s) 41, 249, 575, 1079
BseMI GCAATG 1 cut(s) 1315
BseMII CTCAG 1 cut(s) 989
BseNI ACTGG 3 cut(s) 363, 1142, 1159
BseRI GAGGAG 2 cut(s) 1007, 1271
BseX3I CGGCCG 1 cut(s) 753
BseXI GCAGC 1 cut(s) 460
Bsh1236I CGCG 2 cut(s) 386, 537
Bsh1285I CGRYCG 1 cut(s) 756
BshFI GGCC 5 cut(s) 45, 306, 631, 715, 755
BshNI GGYRCC 1 cut(s) 1138
BshTI ACCGGT 1 cut(s) 92
BsiEI CGRYCG 1 cut(s) 756
BsiHKAI GWGCWC 1 cut(s) 1263
BsiSI CCGG 4 cut(s) 93, 216, 668, 752
BslFI GGGAC 4 cut(s) 103, 233, 936, 1022
BslI CCNNNNNNNGG 4 cut(s) 41, 249, 575, 1079
BsmAI GTCTC 2 cut(s) 83, 856
BsmBI CGTCTC 2 cut(s) 83, 856
BsmFI GGGAC 4 cut(s) 103, 233, 936, 1022
BsmI GAATGC 1 cut(s) 1237
BsnI GGCC 5 cut(s) 45, 306, 631, 715, 755
Bsp119I TTCGAA 1 cut(s) 1067
Bsp1286I GDGCHC 1 cut(s) 1263
Bsp1407I TGTACA 1 cut(s) 97
Bsp143I GATC 5 cut(s) 223, 277, 451, 775, 1358
BspANI GGCC 5 cut(s) 45, 306, 631, 715, 755
BspCNI CTCAG 1 cut(s) 990
BspFNI CGCG 2 cut(s) 386, 537
BspLI GGNNCC 2 cut(s) 750, 1140
BspOI GCTAGC 2 cut(s) 524, 1418
BspPI GGATC 2 cut(s) 285, 1366
BspQI GCTCTTC 2 cut(s) 524, 1014
BspT104I TTCGAA 1 cut(s) 1067
BspT107I GGYRCC 1 cut(s) 1138
BsrDI GCAATG 1 cut(s) 1315
BsrFI RCCGGY 1 cut(s) 92
BsrGI TGTACA 1 cut(s) 97
BsrI ACTGG 3 cut(s) 363, 1142, 1159
BssAI RCCGGY 1 cut(s) 92
BssECI CCNNGG 5 cut(s) 202, 216, 344, 1040, 1171
BssMI GATC 5 cut(s) 223, 277, 451, 775, 1358
BssNI GRCGYC 1 cut(s) 253
BssT1I CCWWGG 3 cut(s) 202, 344, 1171
Bst2UI CCWGG 2 cut(s) 510, 809
Bst4CI ACNGT 3 cut(s) 412, 603, 804
Bst6I CTCTTC 4 cut(s) 524, 972, 1014, 1290
BstACI GRCGYC 1 cut(s) 253
BstAPI GCANNNNNTGC 1 cut(s) 1232
BstAUI TGTACA 1 cut(s) 97
BstBAI YACGTR 1 cut(s) 365
BstBI TTCGAA 1 cut(s) 1067
BstC8I GCNNGC 7 cut(s) 263, 267, 298, 405, 522, 629, 1416
BstDEI CTNAG 3 cut(s) 248, 998, 1314
BstDSI CCRYGG 1 cut(s) 1040
BstF5I GGATG 3 cut(s) 925, 1035, 1396
BstFNI CGCG 2 cut(s) 386, 537
BstH2I RGCGCY 1 cut(s) 527
BstHHI GCGC 2 cut(s) 388, 526
BstKTI GATC 5 cut(s) 226, 280, 454, 778, 1361
BstMAI GTCTC 2 cut(s) 83, 856
BstMBI GATC 5 cut(s) 223, 277, 451, 775, 1358
BstMCI CGRYCG 1 cut(s) 756
BstMWI GCNNNNNNNGC 6 cut(s) 359, 523, 680, 721, 1232, 1340
BstNI CCWGG 2 cut(s) 510, 809
BstNSI RCATGY 2 cut(s) 104, 1204
BstSCI CCNGG 4 cut(s) 215, 508, 750, 807
BstUI CGCG 2 cut(s) 386, 537
BstV1I GCAGC 1 cut(s) 460
BstV2I GAAGAC 1 cut(s) 993
BstX2I RGATCY 3 cut(s) 277, 451, 1358
BstXI CCANNNNNNTGG 2 cut(s) 140, 962
BstYI RGATCY 3 cut(s) 277, 451, 1358
BstZI CGGCCG 1 cut(s) 753
BsuRI GGCC 5 cut(s) 45, 306, 631, 715, 755
BtgI CCRYGG 1 cut(s) 1040
BtrI CACGTC 2 cut(s) 117, 1403
BtsCI GGATG 3 cut(s) 925, 1035, 1396
BtsIMutI CAGTG 2 cut(s) 1149, 1166
Cac8I GCNNGC 7 cut(s) 263, 267, 298, 405, 522, 629, 1416
CfoI GCGC 2 cut(s) 388, 526
Cfr10I RCCGGY 1 cut(s) 92
Cfr13I GGNCC 3 cut(s) 304, 713, 748
CseI GACGC 3 cut(s) 13, 65, 242
Csp6I GTAC 6 cut(s) 98, 156, 571, 694, 805, 1139
CspAI ACCGGT 1 cut(s) 92
CviAII CATG 4 cut(s) 101, 238, 1201, 1285
CviQI GTAC 6 cut(s) 98, 156, 571, 694, 805, 1139
DdeI CTNAG 3 cut(s) 248, 998, 1314
DpnI GATC 5 cut(s) 225, 279, 453, 777, 1360
DpnII GATC 5 cut(s) 223, 277, 451, 775, 1358
DraIII CACNNNGTG 1 cut(s) 1100
EaeI YGGCCR 1 cut(s) 753
EagI CGGCCG 1 cut(s) 753
Eam1104I CTCTTC 4 cut(s) 524, 972, 1014, 1290
EarI CTCTTC 4 cut(s) 524, 972, 1014, 1290
EciI GGCGGA 2 cut(s) 115, 368
Ecl136II GAGCTC 1 cut(s) 1261
EclXI CGGCCG 1 cut(s) 753
Eco130I CCWWGG 3 cut(s) 202, 344, 1171
Eco24I GRGCYC 1 cut(s) 1263
Eco47I GGWCC 1 cut(s) 748
Eco47III AGCGCT 1 cut(s) 525
Eco52I CGGCCG 1 cut(s) 753
Eco53kI GAGCTC 1 cut(s) 1261
Eco57I CTGAAG 2 cut(s) 212, 548
Eco72I CACGTG 1 cut(s) 365
EcoICRI GAGCTC 1 cut(s) 1261
EcoO109I RGGNCCY 1 cut(s) 748
EcoRI GAATTC 1 cut(s) 1108
EcoRII CCWGG 2 cut(s) 508, 807
EcoT14I CCWWGG 3 cut(s) 202, 344, 1171
EcoT38I GRGCYC 1 cut(s) 1263
ErhI CCWWGG 3 cut(s) 202, 344, 1171
Esp3I CGTCTC 2 cut(s) 83, 856
FaeI CATG 4 cut(s) 104, 241, 1204, 1288
FaqI GGGAC 4 cut(s) 103, 233, 936, 1022
FatI CATG 4 cut(s) 100, 237, 1200, 1284
FblI GTMKAC 1 cut(s) 846
Fnu4HI GCNGC 3 cut(s) 474, 518, 535
FokI GGATG 3 cut(s) 912, 1042, 1403
FriOI GRGCYC 1 cut(s) 1263
Fsp4HI GCNGC 3 cut(s) 474, 518, 535
FspBI CTAG 7 cut(s) 162, 291, 521, 641, 662, 1016, 1415
GlaI GCGC 2 cut(s) 387, 525
GluI GCNGC 3 cut(s) 474, 518, 535
HaeII RGCGCY 1 cut(s) 527
HaeIII GGCC 5 cut(s) 45, 306, 631, 715, 755
HapII CCGG 4 cut(s) 93, 216, 668, 752
HgaI GACGC 3 cut(s) 13, 65, 242
HhaI GCGC 2 cut(s) 388, 526
Hin1I GRCGYC 1 cut(s) 253
Hin1II CATG 4 cut(s) 104, 241, 1204, 1288
Hin6I GCGC 2 cut(s) 386, 524
HinP1I GCGC 2 cut(s) 386, 524
HindIII AAGCTT 1 cut(s) 1114
HinfI GANTC 8 cut(s) 397, 565, 708, 797, 836, 883, 917, 1069
HpaII CCGG 4 cut(s) 93, 216, 668, 752
HphI GGTGA 5 cut(s) 82, 792, 952, 1228, 1265
Hpy166II GTNNAC 6 cut(s) 98, 368, 646, 847, 965, 1164
Hpy188I TCNGA 5 cut(s) 190, 244, 617, 770, 1366
Hpy188III TCNNGA 5 cut(s) 607, 784, 921, 1264, 1274
Hpy8I GTNNAC 6 cut(s) 98, 368, 646, 847, 965, 1164
Hpy99I CGWCG 2 cut(s) 194, 258
HpyAV CCTTC 9 cut(s) 66, 184, 498, 551, 555, 787, 1083, 1318, 1346
HpyCH4III ACNGT 3 cut(s) 412, 603, 804
HpyCH4IV ACGT 6 cut(s) 107, 116, 364, 650, 849, 1402
HpyCH4V TGCA 5 cut(s) 296, 497, 659, 902, 1005
HpyF10VI GCNNNNNNNGC 6 cut(s) 359, 523, 680, 721, 1232, 1340
HpyF3I CTNAG 3 cut(s) 248, 998, 1314
HpySE526I ACGT 6 cut(s) 107, 116, 364, 650, 849, 1402
Hsp92I GRCGYC 1 cut(s) 253
Hsp92II CATG 4 cut(s) 104, 241, 1204, 1288
HspAI GCGC 2 cut(s) 386, 524
KpnI GGTACC 1 cut(s) 1142
Kzo9I GATC 5 cut(s) 223, 277, 451, 775, 1358
LguI GCTCTTC 2 cut(s) 524, 1014
LmnI GCTCC 4 cut(s) 393, 861, 994, 1258
Lsp1109I GCAGC 1 cut(s) 460
LweI GCATC 2 cut(s) 96, 646
MaeI CTAG 7 cut(s) 162, 291, 521, 641, 662, 1016, 1415
MaeII ACGT 6 cut(s) 107, 116, 364, 650, 849, 1402
MaeIII GTNAC 6 cut(s) 103, 112, 271, 482, 798, 1090
MalI GATC 5 cut(s) 225, 279, 453, 777, 1360
MboI GATC 5 cut(s) 223, 277, 451, 775, 1358
MboII GAAGA 8 cut(s) 218, 332, 541, 989, 998, 1031, 1307, 1353
MfeI CAATTG 1 cut(s) 587
MflI RGATCY 3 cut(s) 277, 451, 1358
MhlI GDGCHC 1 cut(s) 1263
MluCI AATT 4 cut(s) 65, 587, 897, 1108
MlyI GAGTC 2 cut(s) 806, 845
MmeI TCCRAC 2 cut(s) 213, 894
MseI TTAA 3 cut(s) 209, 677, 719
MslI CAYNNNNRTG 1 cut(s) 641
MspI CCGG 4 cut(s) 93, 216, 668, 752
MspR9I CCNGG 4 cut(s) 217, 510, 752, 809
MunI CAATTG 1 cut(s) 587
Mva1269I GAATGC 1 cut(s) 1237
MvaI CCWGG 2 cut(s) 510, 809
MvnI CGCG 2 cut(s) 386, 537
MwoI GCNNNNNNNGC 6 cut(s) 359, 523, 680, 721, 1232, 1340
NciI CCSGG 2 cut(s) 217, 752
NdeII GATC 5 cut(s) 223, 277, 451, 775, 1358
NheI GCTAGC 2 cut(s) 520, 1414
NlaIII CATG 4 cut(s) 104, 241, 1204, 1288
NlaIV GGNNCC 2 cut(s) 750, 1140
NmuCI GTSAC 5 cut(s) 112, 271, 482, 798, 1090
NspI RCATGY 2 cut(s) 104, 1204
NspV TTCGAA 1 cut(s) 1067
PciI ACATGT 2 cut(s) 100, 1200
PciSI GCTCTTC 2 cut(s) 524, 1014
PcsI WCGNNNNNNNCGW 2 cut(s) 113, 926
PctI GAATGC 1 cut(s) 1237
PfeI GAWTC 6 cut(s) 397, 565, 708, 883, 917, 1069
PinAI ACCGGT 1 cut(s) 92
PkrI GCNGC 3 cut(s) 475, 519, 536
PleI GAGTC 2 cut(s) 805, 844
PmaCI CACGTG 1 cut(s) 365
PmlI CACGTG 1 cut(s) 365
PpsI GAGTC 2 cut(s) 805, 844
Ppu21I YACGTR 1 cut(s) 365
PpuMI RGGWCCY 1 cut(s) 748
PscI ACATGT 2 cut(s) 100, 1200
Psp124BI GAGCTC 1 cut(s) 1263
Psp1406I AACGTT 1 cut(s) 107
Psp5II RGGWCCY 1 cut(s) 748
Psp6I CCWGG 2 cut(s) 508, 807
PspCI CACGTG 1 cut(s) 365
PspGI CCWGG 2 cut(s) 508, 807
PspN4I GGNNCC 2 cut(s) 750, 1140
PspPI GGNCC 3 cut(s) 304, 713, 748
PspPPI RGGWCCY 1 cut(s) 748
PsuI RGATCY 3 cut(s) 277, 451, 1358
RsaI GTAC 6 cut(s) 99, 157, 572, 695, 806, 1140
RsaNI GTAC 6 cut(s) 98, 156, 571, 694, 805, 1139
RseI CAYNNNNRTG 1 cut(s) 641
SacI GAGCTC 1 cut(s) 1263
SapI GCTCTTC 2 cut(s) 524, 1014
SaqAI TTAA 3 cut(s) 209, 677, 719
SatI GCNGC 3 cut(s) 474, 518, 535
Sau3AI GATC 5 cut(s) 223, 277, 451, 775, 1358
Sau96I GGNCC 3 cut(s) 304, 713, 748
ScaI AGTACT 1 cut(s) 157
SchI GAGTC 2 cut(s) 806, 845
ScrFI CCNGG 4 cut(s) 217, 510, 752, 809
SduI GDGCHC 1 cut(s) 1263
SfaNI GCATC 2 cut(s) 96, 646
SfuI TTCGAA 1 cut(s) 1067
SgrAI CRCCGGYG 1 cut(s) 92
SinI GGWCC 1 cut(s) 748
SmiMI CAYNNNNRTG 1 cut(s) 641
SmlI CTYRAG 3 cut(s) 39, 1262, 1376
SmoI CTYRAG 3 cut(s) 39, 1262, 1376
SpeI ACTAGT 1 cut(s) 640
Sse9I AATT 4 cut(s) 65, 587, 897, 1108
SspMI CTAG 7 cut(s) 162, 291, 521, 641, 662, 1016, 1415
SstI GAGCTC 1 cut(s) 1263
StyD4I CCNGG 4 cut(s) 215, 508, 750, 807
StyI CCWWGG 3 cut(s) 202, 344, 1171
TaaI ACNGT 3 cut(s) 412, 603, 804
TaiI ACGT 6 cut(s) 110, 119, 367, 653, 852, 1405
TaqI TCGA 4 cut(s) 417, 606, 791, 1067
TasI AATT 4 cut(s) 65, 587, 897, 1108
TatI WGTACW 2 cut(s) 97, 155
TauI GCSGC 2 cut(s) 520, 537
TfiI GAWTC 6 cut(s) 397, 565, 708, 883, 917, 1069
Tru1I TTAA 3 cut(s) 209, 677, 719
Tru9I TTAA 3 cut(s) 209, 677, 719
TscAI CASTG 2 cut(s) 1149, 1166
TseFI GTSAC 5 cut(s) 112, 271, 482, 798, 1090
TseI GCWGC 1 cut(s) 473
Tsp45I GTSAC 5 cut(s) 112, 271, 482, 798, 1090
TspDTI ATGAA 4 cut(s) 7, 226, 541, 1065
TspGWI ACGGA 6 cut(s) 207, 290, 558, 591, 859, 918
TspRI CASTG 2 cut(s) 1149, 1166
VpaK11BI GGWCC 1 cut(s) 748
XapI RAATTY 1 cut(s) 1108
XceI RCATGY 2 cut(s) 104, 1204
XcmI CCANNNNNNNNNTGG 2 cut(s) 137, 886
XmiI GTMKAC 1 cut(s) 846
XspI CTAG 7 cut(s) 162, 291, 521, 641, 662, 1016, 1415
ZrmI AGTACT 1 cut(s) 157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.