Rorug04G0116000

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
18241320 .. 18260049
18730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0116000.1

Sequence Viewer

Length: 2139 bp
ATGGAGTCGACTTCCGATAGCTCGATGAAAATCTCGCCGTTGGATCTGATGGCGGCGATTTTCAAGGGCAAGATGGACCCCTCCAACGCCTCCGCTGCCTCCTCTGCCGGCGCCGAGGTCACCTCCGTCATTCTCGAGAATCGTGAGTTCGTTATGATCCTGACGACCTCGATTGCCATTTTGATTGGCTGCGTCGTCGTTTTTGTGTGGCGGCGGTCGAGTGCTCAGAAGCCCAAGGTTGTCCAGCCTCTTAAGCCGTTGGTCATCACGAAGCCTGAACCGGAGCTCGACGATGGAAGTAAGAAGGTCACAATCTTCTTCGGCACGCAAACCGGTACTGCTGAGGGATTTGCCAAGGCTTTGGCTGAGGAAGCGAAAGCTCGCTATGAAAAGGTCACATTCAAAGTTGTTGATTTGGATGATTACGCAGCTGATGACGAGGAGTATGAGGAGAAATTGAAAAATGAGAGTTTGGCAATTTTCTTCTTGGCCACATATGGTGATGGTGAGCCGACGGATAATGCTGCTAGATTTTACAAGTGGTTTACAGAGGGTAAAGAGAAGGAAGCATGGCTTCAAAATCTTCATTACGGAGTGTTTGGTCTTGGAAACAGGCAGTATGAGCATTTCAATAAGGTGGCCGTGGTTGTGGATGAGATCCTTGCTGCTCAGGGTGGGAAGAGACTTGTTCCAGTGGGCCTTGGAGATGATGATCAATGCATAGAGGATGATTTCACTGCATGGCGAGAGTTGATGTGGCCTGAGTTGGACCAGTTGGTTCGAGATGAGGATGATGCAACCACACCTGCTTGCACACCTTACACTGCTGCTGTCTTGGAGTATCGAGTTGTATTTAATGATGCTGCTGATGCACCAGTAGAGGATAAGAACTGGAATAATGCAAACGGTCATGCTGTCATTGATGCTCAGCATCCATGCAGGGCTAATGTTGCTGTGAGAAAGGAACTTCATACTCCTGCATCCGATCGTTCTTGCACCCATCTCGAATTTGATATTGCTGGCACTGGACTTACATATGAAACTGGTGATCATGTCGGTGTGTACTGTGAGAATCTTTCTGAAACTGTGGAAGAGGCGATAAGTTTGTTGGGCTTGGCTCCGGAAACATGCTTCTCGATGCACACTGATATGGATGATGGTACACCACTCAGCGGAGGCTCCTTGTTACCTTCCTTTCCACCGTGCACATTAAGAACAGCACTAACTCGATATGCTGATCTTTTGAGTTCTCCAAAAAAGTCTGCCCTACTGGCTTTAGCTGCCTATGCATCTGATCCAGCTGAAGCGGATCGATTAAGACATCTTGCATCACCTGCTGGGAAGGATGAATATGCTCAATGGATGGTTGCAAGTCAGAGAAGCCTTCTTGAGGTCATGGCTGAATTTCCATCAGCCAAGCCCCCACTTGGAGTCTTCTTTGCAGCAGTTGCTCCAAGGTTGCAGCCTAGATACTATTCAATCTCGTCATCCCCGAGGATGGCACCATCTAGAATTCATGTTACTTGTGCACTAGTTTATGACAAAACATCAACAGGAAGGATTCACAAAGGAGTGTGTTCAACCTGGATGAAGAATTCTGTGCCTTCCGCAAAAAGTGGAGATTGTAGTTGGGCACCCGTTTTTGTTCGGCAATCAAACTTCAGACTTCCCGTTGATACTAAAGTACCTATTCTTATGATTGGTCCTGGAACTGGATTGGCTCCTTTCAGGGGTTTCCTGCAGGAAAGATTAGCTCTTAAAGAAGATGGAGCAGAACTTGGACCCTCCGTATTATTCTTTGGATGCAGAAATAGTCAAATGGACTACATTTATGAAGATGAGCTGAACAACTTTGTAGAAAAAGATGCACTTTCTGAGCTTGTGGTTGCATTCTCCCGCCACGGACCCACTAAGGAATATGTGCAACATAAAATGATGCAGAAGGCTTCAGACATCTGGAACATGCTATCTCAGGGAGGTTATATTTACGTTTGTGGTGATGCTAAGGGCATGGCCAGGGATGTCCACCGGACTCTTCACACAATCGTGCAGGAGCAGGGATCTCTGGACAGCTCCAAAGCTGAGAGCATGGTGAAAAATCTGCAAATGAATGGCAGGTATTTGCGTGATGTGTGGTAA

Protein Analysis

712

Amino Acids

78.52

Weight (kDa)

5.14

Isoelectric Point (pI)

40.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Flavodoxin_1 PF00258 105 - 248 3.3e-33 Flavodoxin
FAD_binding_1 PF00667 308 - 529 1.1e-70 FAD binding domain
NAD_binding_1 PF00175 566 - 676 1.4e-16 Oxidoreductase NAD-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000573)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48160 AT3G48160
fragaria_vesca FvH4_3g21790 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330
malus_domestica MD06G1181700.v1.1 MD14G1187600.v1.1
prunus_persica Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1
pyrus_communis pycom06g16070 pycom14g15550
rosa_chinensis RchiOBHm_Chr2g0100091 RchiOBHm_Chr2g0131211 RchiOBHm_Chr2g0131231 RchiOBHm_Chr2g0155761 RchiOBHm_Chr5g0037341 RchiOBHm_Chr6g0286771 RchiOBHm_Chr7g0179801
rosa_laevigata RLG00000005323 RLG00000033775
rosa_multiflora Rmu_co8405049.1_g000002 Rmu_sc0003547.1_g000004 Rmu_sc0004156.1_g000008 Rmu_sc0007546.1_g000012 Rmu_sc0026307.1_g000001 Rmu_sc0032585.1_g000001 Rmu_ssc0000019.1_g000022
rosa_roxburghii Rroxscaffold_1G00027620 Rroxscaffold_1G00027630 Rroxscaffold_1G00043630 Rroxscaffold_2G00107640 Rroxscaffold_3G00273460 Rroxscaffold_5G00347960 Rroxscaffold_5G00350580 Rroxscaffold_5G00366890 Rroxscaffold_6G00391730 Rroxscaffold_6G00392580 Rroxscaffold_7G00170270 Rroxscaffold_7G00170280
rosa_rugosa Rorug02G0499800 Rorug04G0099000 Rorug04G0116000 Rorug05G0129300 Rorug05G0164200 Rorug06G0428300 Rorug06G0428400
rosa_samantha Rh1DG306200 Rh2AG348600 Rh2CG139500 Rh2CG334400 Rh2CG334500 Rh2CG334700 Rh2DG139800 Rh2DG373800 Rh5BG255900 Rh5CG289000 Rh5DG264300 Rh5DG449300 Rh6AG295400 Rh6BG299400 Rh6CG299300 Rh6DG291200 Rh7AG028200 Rh7BG027100 Rh7BG173900 Rh7CG029000 Rh7DG028500
rosa_wichuraiana Rw5G023500 Rw7G002240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 814, 1342
Acc36I ACCTGC 3 cut(s) 814, 1342, 2106
AccB1I GGYRCC 3 cut(s) 110, 1501, 1633
AccI GTMKAC 1 cut(s) 8
AccIII TCCGGA 1 cut(s) 1120
AciI CCGC 8 cut(s) 53, 93, 211, 214, 1173, 1307, 1608, 1897
AclWI GGATC 6 cut(s) 51, 151, 652, 1289, 1317, 2068
AcoI YGGCCR 3 cut(s) 489, 639, 2013
AcsI RAATTY 4 cut(s) 1007, 1403, 1512, 1594
AcuI CTGAAG 3 cut(s) 1323, 1645, 1932
AcyI GRCGYC 1 cut(s) 111
AfaI GTAC 4 cut(s) 337, 1064, 1162, 1686
AfiI CCNNNNNNNGG 6 cut(s) 1172, 1390, 1427, 1498, 1712, 1730
AflII CTTAAG 1 cut(s) 251
AgeI ACCGGT 1 cut(s) 332
AgsI TTSAA 7 cut(s) 64, 403, 460, 578, 631, 1479, 1581
AhlI ACTAGT 1 cut(s) 1531
AjnI CCWGG 3 cut(s) 1583, 1705, 2015
AleI CACNNNNGTG 1 cut(s) 2045
Alw21I GWGCWC 4 cut(s) 226, 288, 1208, 1531
Alw26I GTCTC 1 cut(s) 676
Alw44I GTGCAC 2 cut(s) 1204, 1527
AlwI GGATC 6 cut(s) 51, 151, 652, 1289, 1317, 2068
Ama87I CYCGRG 2 cut(s) 134, 1492
Aor13HI TCCGGA 1 cut(s) 1120
AoxI GGCC 5 cut(s) 489, 639, 697, 758, 2013
ApaLI GTGCAC 2 cut(s) 1204, 1527
ApoI RAATTY 4 cut(s) 1007, 1403, 1512, 1594
AsiGI ACCGGT 1 cut(s) 332
AspLEI GCGC 1 cut(s) 113
AspS9I GGNCC 6 cut(s) 76, 697, 769, 1703, 1781, 1904
AsuHPI GGTGA 7 cut(s) 112, 512, 518, 1058, 1323, 2009, 2104
AvaI CYCGRG 2 cut(s) 134, 1492
AvaII GGWCC 5 cut(s) 76, 769, 1703, 1781, 1904
BaeGI GKGCMC 3 cut(s) 1208, 1531, 1636
BaeI ACNNNNGTAYC 4 cut(s) 1668, 1668, 1701, 1701
BalI TGGCCA 2 cut(s) 491, 2015
BanI GGYRCC 3 cut(s) 110, 1501, 1633
BanII GRGCYC 1 cut(s) 288
BbsI GAAGAC 1 cut(s) 1426
Bbv12I GWGCWC 4 cut(s) 226, 288, 1208, 1531
BbvCI CCTCAGC 2 cut(s) 342, 366
BceAI ACGGC 3 cut(s) 22, 241, 626
BcgI CGANNNNNNTGC 2 cut(s) 985, 1019
BciT130I CCWGG 3 cut(s) 1585, 1707, 2017
BclI TGATCA 2 cut(s) 712, 1048
BcoDI GTCTC 1 cut(s) 676
BcuI ACTAGT 1 cut(s) 1531
BfaI CTAG 4 cut(s) 528, 1467, 1509, 1532
BfmI CTRYAG 1 cut(s) 1739
BfoI RGCGCY 1 cut(s) 114
BfrI CTTAAG 1 cut(s) 251
BfuAI ACCTGC 3 cut(s) 814, 1342, 2106
BglI GCCNNNNNGGC 1 cut(s) 1271
BlpI GCTNAGC 1 cut(s) 927
Bme1390I CCNGG 3 cut(s) 1585, 1707, 2017
Bme18I GGWCC 5 cut(s) 76, 769, 1703, 1781, 1904
BmeT110I CYCGRG 2 cut(s) 134, 1492
BmgT120I GGNCC 6 cut(s) 76, 697, 769, 1703, 1781, 1904
BmiI GGNNCC 9 cut(s) 78, 112, 1119, 1180, 1503, 1635, 1722, 1783, 1906
BmrFI CCNGG 3 cut(s) 1585, 1707, 2017
BpiI GAAGAC 1 cut(s) 1426
BplI GAGNNNNNCTC 2 cut(s) 107, 139
Bpu10I CCTNAGC 4 cut(s) 342, 366, 669, 2004
Bpu1102I GCTNAGC 1 cut(s) 927
BpuEI CTTGAG 1 cut(s) 1409
Bsa29I ATCGAT 1 cut(s) 1312
BsaBI GATNNNNATC 2 cut(s) 29, 711
BsaHI GRCGYC 1 cut(s) 111
BsaJI CCNNGG 9 cut(s) 114, 234, 354, 642, 700, 1454, 1493, 1900, 2016
BsaWI WCCGGW 4 cut(s) 280, 332, 1120, 2028
Bsc4I CCNNNNNNNGG 6 cut(s) 1172, 1390, 1427, 1498, 1712, 1730
Bse118I RCCGGY 2 cut(s) 107, 332
Bse1I ACTGG 8 cut(s) 692, 772, 875, 896, 1030, 1048, 1275, 1717
Bse8I GATNNNNATC 2 cut(s) 29, 711
BseAI TCCGGA 1 cut(s) 1120
BseBI CCWGG 3 cut(s) 1585, 1707, 2017
BseCI ATCGAT 1 cut(s) 1312
BseDI CCNNGG 9 cut(s) 114, 234, 354, 642, 700, 1454, 1493, 1900, 2016
BseJI GATNNNNATC 2 cut(s) 29, 711
BseLI CCNNNNNNNGG 6 cut(s) 1172, 1390, 1427, 1498, 1712, 1730
BseNI ACTGG 8 cut(s) 692, 772, 875, 896, 1030, 1048, 1275, 1717
BseRI GAGGAG 3 cut(s) 91, 455, 464
BseSI GKGCMC 3 cut(s) 1208, 1531, 1636
BseYI CCCAGC 1 cut(s) 1337
BsgI GTGCAG 1 cut(s) 2069
Bsh1285I CGRYCG 2 cut(s) 218, 988
BshFI GGCC 5 cut(s) 491, 641, 699, 760, 2015
BshNI GGYRCC 3 cut(s) 110, 1501, 1633
BshTI ACCGGT 1 cut(s) 332
BshVI ATCGAT 1 cut(s) 1312
BsiEI CGRYCG 2 cut(s) 218, 988
BsiHKAI GWGCWC 4 cut(s) 226, 288, 1208, 1531
BsiHKCI CYCGRG 2 cut(s) 134, 1492
BsiSI CCGG 5 cut(s) 108, 281, 333, 1121, 2029
BslI CCNNNNNNNGG 6 cut(s) 1172, 1390, 1427, 1498, 1712, 1730
BsmAI GTCTC 1 cut(s) 676
BsmI GAATGC 1 cut(s) 1889
BsnI GGCC 5 cut(s) 491, 641, 699, 760, 2015
BsoBI CYCGRG 2 cut(s) 134, 1492
Bsp1286I GDGCHC 5 cut(s) 226, 288, 1208, 1531, 1636
Bsp13I TCCGGA 1 cut(s) 1120
Bsp1720I GCTNAGC 1 cut(s) 927
BspACI CCGC 8 cut(s) 53, 93, 211, 214, 1173, 1307, 1608, 1897
BspANI GGCC 5 cut(s) 491, 641, 699, 760, 2015
BspDI ATCGAT 1 cut(s) 1312
BspEI TCCGGA 1 cut(s) 1120
BspLI GGNNCC 9 cut(s) 78, 112, 1119, 1180, 1503, 1635, 1722, 1783, 1906
BspMAI CTGCAG 1 cut(s) 1743
BspMI ACCTGC 3 cut(s) 814, 1342, 2106
BspPI GGATC 6 cut(s) 51, 151, 652, 1289, 1317, 2068
BspT107I GGYRCC 3 cut(s) 110, 1501, 1633
BspTI CTTAAG 1 cut(s) 251
BsrFI RCCGGY 2 cut(s) 107, 332
BsrI ACTGG 8 cut(s) 692, 772, 875, 896, 1030, 1048, 1275, 1717
BssAI RCCGGY 2 cut(s) 107, 332
BssECI CCNNGG 9 cut(s) 114, 234, 354, 642, 700, 1454, 1493, 1900, 2016
BssNI GRCGYC 1 cut(s) 111
BssT1I CCWWGG 4 cut(s) 234, 354, 700, 1454
Bst2UI CCWGG 3 cut(s) 1585, 1707, 2017
Bst4CI ACNGT 4 cut(s) 908, 1067, 1087, 1203
Bst6I CTCTTC 3 cut(s) 674, 1086, 2040
BstACI GRCGYC 1 cut(s) 111
BstAFI CTTAAG 1 cut(s) 251
BstAPI GCANNNNNTGC 2 cut(s) 1334, 1448
BstC8I GCNNGC 5 cut(s) 109, 326, 382, 811, 1021
BstDSI CCRYGG 2 cut(s) 642, 1900
BstEII GGTNACC 1 cut(s) 118
BstENI CCTNNNNNAGG 1 cut(s) 1388
BstH2I RGCGCY 1 cut(s) 114
BstHHI GCGC 1 cut(s) 113
BstMAI GTCTC 1 cut(s) 676
BstMCI CGRYCG 2 cut(s) 218, 988
BstNI CCWGG 3 cut(s) 1585, 1707, 2017
BstNSI RCATGY 2 cut(s) 1131, 1966
BstPI GGTNACC 1 cut(s) 118
BstSCI CCNGG 3 cut(s) 1583, 1705, 2015
BstSFI CTRYAG 1 cut(s) 1739
BstSLI GKGCMC 3 cut(s) 1208, 1531, 1636
BstV2I GAAGAC 1 cut(s) 1426
BstX2I RGATCY 3 cut(s) 43, 657, 2060
BstXI CCANNNNNNTGG 1 cut(s) 361
BstYI RGATCY 3 cut(s) 43, 657, 2060
Bsu15I ATCGAT 1 cut(s) 1312
BsuRI GGCC 5 cut(s) 491, 641, 699, 760, 2015
BsuTUI ATCGAT 1 cut(s) 1312
BtgI CCRYGG 2 cut(s) 642, 1900
BtsI GCAGTG 2 cut(s) 735, 822
BtsIMutI CAGTG 5 cut(s) 699, 735, 822, 1023, 1143
BveI ACCTGC 3 cut(s) 814, 1342, 2106
Cac8I GCNNGC 5 cut(s) 109, 326, 382, 811, 1021
CfoI GCGC 1 cut(s) 113
Cfr10I RCCGGY 2 cut(s) 107, 332
Cfr13I GGNCC 6 cut(s) 76, 697, 769, 1703, 1781, 1904
ClaI ATCGAT 1 cut(s) 1312
CseI GACGC 1 cut(s) 181
Csp6I GTAC 4 cut(s) 336, 1063, 1161, 1685
CspAI ACCGGT 1 cut(s) 332
CviQI GTAC 4 cut(s) 336, 1063, 1161, 1685
DinI GGCGCC 1 cut(s) 112
EaeI YGGCCR 3 cut(s) 489, 639, 2013
Eam1104I CTCTTC 3 cut(s) 674, 1086, 2040
EarI CTCTTC 3 cut(s) 674, 1086, 2040
Ecl136II GAGCTC 1 cut(s) 286
Eco130I CCWWGG 4 cut(s) 234, 354, 700, 1454
Eco24I GRGCYC 1 cut(s) 288
Eco47I GGWCC 5 cut(s) 76, 769, 1703, 1781, 1904
Eco53kI GAGCTC 1 cut(s) 286
Eco57I CTGAAG 3 cut(s) 1323, 1645, 1932
Eco88I CYCGRG 2 cut(s) 134, 1492
Eco91I GGTNACC 1 cut(s) 118
EcoICRI GAGCTC 1 cut(s) 286
EcoNI CCTNNNNNAGG 1 cut(s) 1388
EcoO65I GGTNACC 1 cut(s) 118
EcoRI GAATTC 2 cut(s) 1512, 1594
EcoRII CCWGG 3 cut(s) 1583, 1705, 2015
EcoT14I CCWWGG 4 cut(s) 234, 354, 700, 1454
EcoT22I ATGCAT 2 cut(s) 722, 1291
EcoT38I GRGCYC 1 cut(s) 288
EgeI GGCGCC 1 cut(s) 112
EheI GGCGCC 1 cut(s) 112
ErhI CCWWGG 4 cut(s) 234, 354, 700, 1454
FalI AAGNNNNNCTT 4 cut(s) 558, 590, 1854, 1886
FauI CCCGC 1 cut(s) 1904
FauNDI CATATG 2 cut(s) 496, 1036
FbaI TGATCA 2 cut(s) 712, 1048
FblI GTMKAC 1 cut(s) 8
FriOI GRGCYC 1 cut(s) 288
FspBI CTAG 4 cut(s) 528, 1467, 1509, 1532
GlaI GCGC 1 cut(s) 112
GsaI CCCAGC 1 cut(s) 1341
HaeII RGCGCY 1 cut(s) 114
HaeIII GGCC 5 cut(s) 491, 641, 699, 760, 2015
HapII CCGG 5 cut(s) 108, 281, 333, 1121, 2029
HgaI GACGC 1 cut(s) 181
HhaI GCGC 1 cut(s) 113
Hin1I GRCGYC 1 cut(s) 111
Hin6I GCGC 1 cut(s) 111
HinP1I GCGC 1 cut(s) 111
HincII GTYRAC 1 cut(s) 9
HindII GTYRAC 1 cut(s) 9
HinfI GANTC 6 cut(s) 5, 139, 1072, 1431, 1561, 2032
HpaII CCGG 5 cut(s) 108, 281, 333, 1121, 2029
HphI GGTGA 7 cut(s) 112, 512, 518, 1058, 1323, 2009, 2104
Hpy166II GTNNAC 7 cut(s) 9, 546, 1063, 1163, 1206, 1529, 2026
Hpy8I GTNNAC 7 cut(s) 9, 546, 1063, 1163, 1206, 1529, 2026
Hpy99I CGWCG 4 cut(s) 197, 200, 293, 517
HpyAV CCTTC 8 cut(s) 298, 556, 1200, 1336, 1394, 1551, 1614, 1936
HpyCH4III ACNGT 4 cut(s) 908, 1067, 1087, 1203
HpyCH4IV ACGT 1 cut(s) 1989
HpySE526I ACGT 1 cut(s) 1989
Hsp92I GRCGYC 1 cut(s) 111
HspAI GCGC 1 cut(s) 111
KasI GGCGCC 1 cut(s) 110
Kpn2I TCCGGA 1 cut(s) 1120
KroI GCCGGC 1 cut(s) 107
KroNI GCCGGC 1 cut(s) 109
Ksp22I TGATCA 2 cut(s) 712, 1048
LmnI GCTCC 8 cut(s) 283, 1123, 1184, 1456, 1726, 1769, 2053, 2078
MaeI CTAG 4 cut(s) 528, 1467, 1509, 1532
MaeII ACGT 1 cut(s) 1989
MaeIII GTNAC 5 cut(s) 118, 307, 394, 1185, 1519
MflI RGATCY 3 cut(s) 43, 657, 2060
MhlI GDGCHC 5 cut(s) 226, 288, 1208, 1531, 1636
MlsI TGGCCA 2 cut(s) 491, 2015
MluCI AATT 6 cut(s) 455, 477, 1007, 1403, 1512, 1594
MluNI TGGCCA 2 cut(s) 491, 2015
Mly113I GGCGCC 1 cut(s) 111
MlyI GAGTC 3 cut(s) 14, 1440, 2026
MmeI TCCRAC 3 cut(s) 21, 108, 747
Mox20I TGGCCA 2 cut(s) 491, 2015
Mph1103I ATGCAT 2 cut(s) 722, 1291
MroI TCCGGA 1 cut(s) 1120
MroNI GCCGGC 1 cut(s) 107
MscI TGGCCA 2 cut(s) 491, 2015
MseI TTAA 5 cut(s) 252, 855, 1211, 1316, 1758
MslI CAYNNNNRTG 3 cut(s) 1056, 1148, 2045
Msp20I TGGCCA 2 cut(s) 491, 2015
MspA1I CMGCKG 4 cut(s) 95, 431, 1173, 1301
MspCI CTTAAG 1 cut(s) 251
MspI CCGG 5 cut(s) 108, 281, 333, 1121, 2029
MspR9I CCNGG 3 cut(s) 1585, 1707, 2017
Mva1269I GAATGC 1 cut(s) 1889
MvaI CCWGG 3 cut(s) 1585, 1707, 2017
NaeI GCCGGC 1 cut(s) 109
NarI GGCGCC 1 cut(s) 111
NdeI CATATG 2 cut(s) 496, 1036
NgoMIV GCCGGC 1 cut(s) 107
NlaIV GGNNCC 9 cut(s) 78, 112, 1119, 1180, 1503, 1635, 1722, 1783, 1906
NmeAIII GCCGAG 1 cut(s) 139
NmuCI GTSAC 3 cut(s) 118, 307, 394
NsiI ATGCAT 2 cut(s) 722, 1291
NspI RCATGY 2 cut(s) 1131, 1966
OliI CACNNNNGTG 1 cut(s) 2045
PaeR7I CTCGAG 1 cut(s) 134
PaqCI CACCTGC 2 cut(s) 814, 1342
PcsI WCGNNNNNNNCGW 1 cut(s) 1490
PctI GAATGC 1 cut(s) 1889
PdiI GCCGGC 1 cut(s) 109
PfeI GAWTC 3 cut(s) 139, 1072, 1561
PfoI TCCNGGA 1 cut(s) 1705
PinAI ACCGGT 1 cut(s) 332
Ple19I CGATCG 1 cut(s) 988
PleI GAGTC 3 cut(s) 13, 1439, 2026
PluTI GGCGCC 1 cut(s) 114
PpsI GAGTC 3 cut(s) 13, 1439, 2026
Psp124BI GAGCTC 1 cut(s) 288
Psp6I CCWGG 3 cut(s) 1583, 1705, 2015
PspEI GGTNACC 1 cut(s) 118
PspFI CCCAGC 1 cut(s) 1337
PspGI CCWGG 3 cut(s) 1583, 1705, 2015
PspN4I GGNNCC 9 cut(s) 78, 112, 1119, 1180, 1503, 1635, 1722, 1783, 1906
PspPI GGNCC 6 cut(s) 76, 697, 769, 1703, 1781, 1904
PstI CTGCAG 1 cut(s) 1743
PsuI RGATCY 3 cut(s) 43, 657, 2060
PvuI CGATCG 1 cut(s) 988
PvuII CAGCTG 2 cut(s) 431, 1301
RsaI GTAC 4 cut(s) 337, 1064, 1162, 1686
RsaNI GTAC 4 cut(s) 336, 1063, 1161, 1685
RseI CAYNNNNRTG 3 cut(s) 1056, 1148, 2045
SacI GAGCTC 1 cut(s) 288
SalI GTCGAC 1 cut(s) 7
SaqAI TTAA 5 cut(s) 252, 855, 1211, 1316, 1758
Sau96I GGNCC 6 cut(s) 76, 697, 769, 1703, 1781, 1904
SbfI CCTGCAGG 1 cut(s) 1743
SchI GAGTC 3 cut(s) 14, 1440, 2026
ScrFI CCNGG 3 cut(s) 1585, 1707, 2017
SdaI CCTGCAGG 1 cut(s) 1743
SduI GDGCHC 5 cut(s) 226, 288, 1208, 1531, 1636
SfcI CTRYAG 1 cut(s) 1739
SfoI GGCGCC 1 cut(s) 112
Sfr274I CTCGAG 1 cut(s) 134
SinI GGWCC 5 cut(s) 76, 769, 1703, 1781, 1904
SlaI CTCGAG 1 cut(s) 134
SmiMI CAYNNNNRTG 3 cut(s) 1056, 1148, 2045
SmlI CTYRAG 3 cut(s) 134, 251, 1388
SmoI CTYRAG 3 cut(s) 134, 251, 1388
SpeI ACTAGT 1 cut(s) 1531
Sse8387I CCTGCAGG 1 cut(s) 1743
Sse9I AATT 6 cut(s) 455, 477, 1007, 1403, 1512, 1594
SsiI CCGC 8 cut(s) 53, 93, 211, 214, 1173, 1307, 1608, 1897
SspDI GGCGCC 1 cut(s) 110
SspMI CTAG 4 cut(s) 528, 1467, 1509, 1532
SstI GAGCTC 1 cut(s) 288
StyD4I CCNGG 3 cut(s) 1583, 1705, 2015
StyI CCWWGG 4 cut(s) 234, 354, 700, 1454
TaaI ACNGT 4 cut(s) 908, 1067, 1087, 1203
TaiI ACGT 1 cut(s) 1992
TasI AATT 6 cut(s) 455, 477, 1007, 1403, 1512, 1594
TatI WGTACW 1 cut(s) 1062
TauI GCSGC 2 cut(s) 56, 214
TfiI GAWTC 3 cut(s) 139, 1072, 1561
Tru1I TTAA 5 cut(s) 252, 855, 1211, 1316, 1758
Tru9I TTAA 5 cut(s) 252, 855, 1211, 1316, 1758
TscAI CASTG 5 cut(s) 699, 742, 829, 1030, 1150
TseFI GTSAC 3 cut(s) 118, 307, 394
Tsp45I GTSAC 3 cut(s) 118, 307, 394
TspGWI ACGGA 5 cut(s) 115, 530, 606, 1777, 1917
TspRI CASTG 5 cut(s) 699, 742, 829, 1030, 1150
Vha464I CTTAAG 1 cut(s) 251
VneI GTGCAC 2 cut(s) 1204, 1527
VpaK11BI GGWCC 5 cut(s) 76, 769, 1703, 1781, 1904
XagI CCTNNNNNAGG 1 cut(s) 1388
XapI RAATTY 4 cut(s) 1007, 1403, 1512, 1594
XbaI TCTAGA 1 cut(s) 1508
XceI RCATGY 2 cut(s) 1131, 1966
XhoI CTCGAG 1 cut(s) 134
XmiI GTMKAC 1 cut(s) 8
XspI CTAG 4 cut(s) 528, 1467, 1509, 1532
Zsp2I ATGCAT 2 cut(s) 722, 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.