E2F transcription factor-like E2FE
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_E2F_TDP | PF02319 | 47 - 90 | 4.9e-10 | E2F/DP family winged-helix DNA-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 96 |
| AclWI | GGATC | 2 cut(s) | 25, 185 |
| AcsI | RAATTY | 4 cut(s) | 211, 295, 301, 436 |
| AfaI | GTAC | 2 cut(s) | 107, 257 |
| AgsI | TTSAA | 3 cut(s) | 295, 301, 389 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 287, 319 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 19, 51 |
| AluBI | AGCT | 1 cut(s) | 459 |
| AluI | AGCT | 1 cut(s) | 459 |
| AlwI | GGATC | 2 cut(s) | 25, 185 |
| ApoI | RAATTY | 4 cut(s) | 211, 295, 301, 436 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 185, 217 |
| AsuHPI | GGTGA | 4 cut(s) | 56, 181, 220, 410 |
| AsuII | TTCGAA | 2 cut(s) | 440, 452 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 239, 271 |
| BbsI | GAAGAC | 1 cut(s) | 230 |
| BccI | CCATC | 2 cut(s) | 281, 416 |
| BceAI | ACGGC | 1 cut(s) | 249 |
| BfaI | CTAG | 1 cut(s) | 463 |
| BglII | AGATCT | 1 cut(s) | 337 |
| BmsI | GCATC | 1 cut(s) | 127 |
| BpiI | GAAGAC | 1 cut(s) | 230 |
| Bpu14I | TTCGAA | 2 cut(s) | 440, 452 |
| BsaJI | CCNNGG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 1 cut(s) | 63 |
| BseGI | GGATG | 2 cut(s) | 142, 427 |
| BseRI | GAGGAG | 3 cut(s) | 71, 187, 376 |
| BslFI | GGGAC | 1 cut(s) | 346 |
| BsmFI | GGGAC | 1 cut(s) | 346 |
| Bsp119I | TTCGAA | 2 cut(s) | 440, 452 |
| Bsp1407I | TGTACA | 1 cut(s) | 105 |
| Bsp143I | GATC | 4 cut(s) | 17, 177, 337, 391 |
| BspACI | CCGC | 1 cut(s) | 96 |
| BspPI | GGATC | 2 cut(s) | 25, 185 |
| BspQI | GCTCTTC | 1 cut(s) | 449 |
| BspT104I | TTCGAA | 2 cut(s) | 440, 452 |
| BsrGI | TGTACA | 1 cut(s) | 105 |
| BssECI | CCNNGG | 1 cut(s) | 63 |
| BssMI | GATC | 4 cut(s) | 17, 177, 337, 391 |
| BssT1I | CCWWGG | 1 cut(s) | 63 |
| Bst6I | CTCTTC | 4 cut(s) | 277, 314, 374, 449 |
| BstAUI | TGTACA | 1 cut(s) | 105 |
| BstBI | TTCGAA | 2 cut(s) | 440, 452 |
| BstC8I | GCNNGC | 1 cut(s) | 312 |
| BstDEI | CTNAG | 1 cut(s) | 315 |
| BstF5I | GGATG | 2 cut(s) | 142, 427 |
| BstKTI | GATC | 4 cut(s) | 20, 180, 340, 394 |
| BstMBI | GATC | 4 cut(s) | 17, 177, 337, 391 |
| BstV2I | GAAGAC | 1 cut(s) | 230 |
| BstX2I | RGATCY | 3 cut(s) | 17, 177, 337 |
| BstYI | RGATCY | 3 cut(s) | 17, 177, 337 |
| BtsCI | GGATG | 2 cut(s) | 142, 427 |
| BtsI | GCAGTG | 2 cut(s) | 108, 186 |
| BtsIMutI | CAGTG | 3 cut(s) | 108, 159, 186 |
| Cac8I | GCNNGC | 1 cut(s) | 312 |
| Csp6I | GTAC | 2 cut(s) | 106, 256 |
| CviJI | RGCY | 5 cut(s) | 9, 271, 314, 327, 459 |
| CviKI_1 | RGCY | 5 cut(s) | 9, 271, 314, 327, 459 |
| CviQI | GTAC | 2 cut(s) | 106, 256 |
| DdeI | CTNAG | 1 cut(s) | 315 |
| DpnI | GATC | 4 cut(s) | 19, 179, 339, 393 |
| DpnII | GATC | 4 cut(s) | 17, 177, 337, 391 |
| Eam1104I | CTCTTC | 4 cut(s) | 277, 314, 374, 449 |
| EarI | CTCTTC | 4 cut(s) | 277, 314, 374, 449 |
| Eco130I | CCWWGG | 1 cut(s) | 63 |
| EcoRI | GAATTC | 1 cut(s) | 436 |
| EcoT14I | CCWWGG | 1 cut(s) | 63 |
| ErhI | CCWWGG | 1 cut(s) | 63 |
| FaiI | YATR | 3 cut(s) | 183, 231, 374 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 311, 343 |
| FaqI | GGGAC | 1 cut(s) | 346 |
| FokI | GGATG | 2 cut(s) | 149, 434 |
| FspBI | CTAG | 1 cut(s) | 463 |
| HinfI | GANTC | 2 cut(s) | 59, 226 |
| HphI | GGTGA | 4 cut(s) | 56, 181, 220, 410 |
| Hpy166II | GTNNAC | 1 cut(s) | 108 |
| Hpy188I | TCNGA | 4 cut(s) | 22, 39, 342, 421 |
| Hpy188III | TCNNGA | 1 cut(s) | 389 |
| Hpy8I | GTNNAC | 1 cut(s) | 108 |
| Hpy99I | CGWCG | 1 cut(s) | 208 |
| HpyAV | CCTTC | 5 cut(s) | 40, 44, 83, 160, 436 |
| HpyCH4V | TGCA | 3 cut(s) | 113, 140, 414 |
| HpyF3I | CTNAG | 1 cut(s) | 315 |
| Kzo9I | GATC | 4 cut(s) | 17, 177, 337, 391 |
| LguI | GCTCTTC | 1 cut(s) | 449 |
| LmnI | GCTCC | 2 cut(s) | 307, 363 |
| LpnPI | CCDG | 5 cut(s) | 23, 99, 228, 244, 296 |
| LweI | GCATC | 1 cut(s) | 127 |
| MaeI | CTAG | 1 cut(s) | 463 |
| MalI | GATC | 4 cut(s) | 19, 179, 339, 393 |
| MboI | GATC | 4 cut(s) | 17, 177, 337, 391 |
| MboII | GAAGA | 4 cut(s) | 235, 294, 331, 391 |
| MflI | RGATCY | 3 cut(s) | 17, 177, 337 |
| MluCI | AATT | 6 cut(s) | 116, 211, 295, 301, 415, 436 |
| MlyI | GAGTC | 2 cut(s) | 68, 220 |
| MnlI | CCTC | 8 cut(s) | 35, 49, 87, 165, 168, 315, 354, 394 |
| NdeII | GATC | 4 cut(s) | 17, 177, 337, 391 |
| NspV | TTCGAA | 2 cut(s) | 440, 452 |
| PciSI | GCTCTTC | 1 cut(s) | 449 |
| PleI | GAGTC | 2 cut(s) | 67, 220 |
| PpsI | GAGTC | 2 cut(s) | 67, 220 |
| PsuI | RGATCY | 3 cut(s) | 17, 177, 337 |
| RsaI | GTAC | 2 cut(s) | 107, 257 |
| RsaNI | GTAC | 2 cut(s) | 106, 256 |
| SapI | GCTCTTC | 1 cut(s) | 449 |
| Sau3AI | GATC | 4 cut(s) | 17, 177, 337, 391 |
| SchI | GAGTC | 2 cut(s) | 68, 220 |
| SetI | ASST | 9 cut(s) | 32, 46, 75, 171, 263, 372, 400, 405, 461 |
| SfaNI | GCATC | 1 cut(s) | 127 |
| SfuI | TTCGAA | 2 cut(s) | 440, 452 |
| Sse9I | AATT | 6 cut(s) | 116, 211, 295, 301, 415, 436 |
| SsiI | CCGC | 1 cut(s) | 96 |
| SspMI | CTAG | 1 cut(s) | 463 |
| StyI | CCWWGG | 1 cut(s) | 63 |
| TaqI | TCGA | 3 cut(s) | 79, 440, 452 |
| TasI | AATT | 6 cut(s) | 116, 211, 295, 301, 415, 436 |
| TatI | WGTACW | 1 cut(s) | 105 |
| TscAI | CASTG | 3 cut(s) | 115, 159, 193 |
| TspRI | CASTG | 3 cut(s) | 115, 159, 193 |
| XapI | RAATTY | 4 cut(s) | 211, 295, 301, 436 |
| XspI | CTAG | 1 cut(s) | 463 |