Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000573

Physical Location & Seq

Genomic Coordinates Reverse (-)

14830268 .. 14831266

Gene Structure 999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g21790.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGGCCTCCTCCGCCGTCGACTATCCTCCGGCCACCACCACCACCCGCCGCGACACCTCCTACAGCCGCAAGCAGAAGTCTTTAAGCCTCCTCTGCTCCAATTTCCTCAGCCTCTACAACCGCGACGACGGCGCCACCGTCCTGATCGGCCTCGACGACGCCGCCTCCCGCCTCGGCGTCGTCCGCCGCCGGATCTACGACATCGTCAACGTCTTGGAGAGCGTCGGGCTGTTATCAAGAAAGTCCAAGAACACGTACACGTGGAAGGGCTTCGCCGCCGTCCCTGACGCCCTGAAGGAGCTCCAAGAAGAAGGCCTGGATCTGACTCCGATCCCGGCCCCGGTCGACGAGACCAAGAGAGAGAAGTCGCTGGCGCTTCTGGCGCAGAATTTCGTGAAGCTGTTCGTGTGTGGCGGATCGGAATCGAAAGCGATTTCGCTCGATGAAGCTGCGAAGCTGCTGCTCGGAGTTGGAGACGCGCAGAATGTGTTTGTGATGAGGACGAAGGTGAGGAGGATCTATGACATTGCGAATGTGCTGTCCTCGGTGAATTTGATTGAGAAGACGCATACGGCGGATACAGGGAAGCCGGCGTACCGGTGGTTGGGGCTGAATGGGAGAAGAGAGGGTTTGGATCTGAATTCGGAGCAGGGGAAGAAGAGAAGCTTTGGGACGGATCTGACGAATGTGAGCTGTAAGAAGAGTAAGGTTGCGGAGAAGGCAATGCGAAATCAGGGAGAGGCTGAGAAGTGCAATTCTGATGGCTGTGGGGCGAAGGAGAGTGCAAAGAGCTACCAGTTTGGTCCTTTCGCTCCGGTGGCGGTTCCTAGAGGGAGGAACGGTGTTAACATCAACAAGGTTTGCTGGGAGACTGTGGGAGCTTGTTACCGGCCGCAGTACCAGAACCAAGCGATGAAGGAGCTGTTTTCGCATTACAGGGAAGCGTGGAAGTTGTGGAACTCTCAAGTTGCTGAGAAGAATCCGATTCGGAGTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006355 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0019219 GO:0019222 GO:0022402 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032875 GO:0032876 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045786 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051252 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1903506 GO:2000104 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E2F_TDP

Protein Analysis

333

Amino Acids

36.71

Weight (kDa)

9.42

Isoelectric Point (pI)

40.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_E2F_TDP	PF02319	24 - 90	9.5e-22	E2F/DP family winged-helix DNA-binding domain
WHD_E2F_TDP	PF02319	120 - 203	2.4e-18	E2F/DP family winged-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48160 AT3G48160
fragaria_vesca	FvH4_3g21790 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330
malus_domestica	MD06G1181700.v1.1 MD14G1187600.v1.1
prunus_persica	Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1
pyrus_communis	pycom06g16070 pycom14g15550
rosa_chinensis	RchiOBHm_Chr2g0100091 RchiOBHm_Chr2g0131211 RchiOBHm_Chr2g0131231 RchiOBHm_Chr2g0155761 RchiOBHm_Chr5g0037341 RchiOBHm_Chr6g0286771 RchiOBHm_Chr7g0179801
rosa_laevigata	RLG00000005323 RLG00000033775
rosa_multiflora	Rmu_co8405049.1_g000002 Rmu_sc0003547.1_g000004 Rmu_sc0004156.1_g000008 Rmu_sc0007546.1_g000012 Rmu_sc0026307.1_g000001 Rmu_sc0032585.1_g000001 Rmu_ssc0000019.1_g000022
rosa_roxburghii	Rroxscaffold_1G00027620 Rroxscaffold_1G00027630 Rroxscaffold_1G00043630 Rroxscaffold_2G00107640 Rroxscaffold_3G00273460 Rroxscaffold_5G00347960 Rroxscaffold_5G00350580 Rroxscaffold_5G00366890 Rroxscaffold_6G00391730 Rroxscaffold_6G00392580 Rroxscaffold_7G00170270 Rroxscaffold_7G00170280
rosa_rugosa	Rorug02G0499800 Rorug04G0099000 Rorug04G0116000 Rorug05G0129300 Rorug05G0164200 Rorug06G0428300 Rorug06G0428400
rosa_samantha	Rh1DG306200 Rh2AG348600 Rh2CG139500 Rh2CG334400 Rh2CG334500 Rh2CG334700 Rh2DG139800 Rh2DG373800 Rh5BG255900 Rh5CG289000 Rh5DG264300 Rh5DG449300 Rh6AG295400 Rh6BG299400 Rh6CG299300 Rh6DG291200 Rh7AG028200 Rh7BG027100 Rh7BG173900 Rh7CG029000 Rh7DG028500
rosa_wichuraiana	Rw5G023500 Rw7G002240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	131
AccI	GTMKAC	2 cut(s)	18, 345
AccII	CGCG	3 cut(s)	51, 123, 479
AclWI	GGATC	7 cut(s)	200, 325, 327, 424, 524, 642, 684
AcoI	YGGCCR	2 cut(s)	30, 890
AcsI	RAATTY	3 cut(s)	388, 550, 640
AcuI	CTGAAG	1 cut(s)	314
AcvI	CACGTG	1 cut(s)	261
AcyI	GRCGYC	4 cut(s)	132, 159, 177, 288
AfaI	GTAC	3 cut(s)	257, 596, 899
AfiI	CCNNNNNNNGG	2 cut(s)	340, 604
AflIII	ACRYGT	2 cut(s)	252, 258
AgeI	ACCGGT	1 cut(s)	597
AjnI	CCWGG	1 cut(s)	315
AluBI	AGCT	9 cut(s)	301, 400, 449, 457, 666, 693, 792, 881, 922
AluI	AGCT	9 cut(s)	301, 400, 449, 457, 666, 693, 792, 881, 922
Alw21I	GWGCWC	1 cut(s)	303
Alw26I	GTCTC	3 cut(s)	344, 468, 863
AlwI	GGATC	7 cut(s)	200, 325, 327, 424, 524, 642, 684
AoxI	GGCC	6 cut(s)	3, 30, 148, 313, 336, 890
ApeKI	GCWGC	3 cut(s)	449, 457, 460
ApoI	RAATTY	3 cut(s)	388, 550, 640
ArsI	GACNNNNNNTTYG	2 cut(s)	524, 556
AsiGI	ACCGGT	1 cut(s)	597
Asp700I	GAANNNNTTC	2 cut(s)	269, 401
AspLEI	GCGC	4 cut(s)	134, 376, 385, 481
AspS9I	GGNCC	2 cut(s)	337, 803
AsuC2I	CCSGG	2 cut(s)	335, 341
AsuHPI	GGTGA	2 cut(s)	520, 559
AvaII	GGWCC	1 cut(s)	803
BanI	GGYRCC	1 cut(s)	131
BanII	GRGCYC	1 cut(s)	303
BarI	GAAGNNNNNNTAC	2 cut(s)	578, 610
BbrPI	CACGTG	1 cut(s)	261
BbsI	GAAGAC	1 cut(s)	569
Bbv12I	GWGCWC	1 cut(s)	303
BbvCI	CCTCAGC	1 cut(s)	107
BbvI	GCAGC	3 cut(s)	436, 444, 447
BccI	CCATC	1 cut(s)	755
BceAI	ACGGC	3 cut(s)	145, 263, 588
BcgI	CGANNNNNNTGC	4 cut(s)	431, 442, 465, 476
BciT130I	CCWGG	1 cut(s)	317
BciVI	GTATCC	1 cut(s)	571
BcnI	CCSGG	2 cut(s)	335, 341
BcoDI	GTCTC	3 cut(s)	344, 468, 863
BfaI	CTAG	1 cut(s)	828
BfmI	CTRYAG	1 cut(s)	61
BfoI	RGCGCY	2 cut(s)	135, 377
BfuI	GTATCC	1 cut(s)	571
BisI	GCNGC	9 cut(s)	49, 67, 162, 187, 276, 450, 458, 461, 893
BlsI	GCNGC	9 cut(s)	50, 68, 163, 188, 277, 451, 459, 462, 894
Bme1390I	CCNGG	3 cut(s)	317, 335, 341
Bme18I	GGWCC	1 cut(s)	803
BmgT120I	GGNCC	2 cut(s)	337, 803
BmiI	GGNNCC	3 cut(s)	133, 339, 825
BmrFI	CCNGG	3 cut(s)	317, 335, 341
BpiI	GAAGAC	1 cut(s)	569
Bpu10I	CCTNAGC	1 cut(s)	107
BpuEI	CTTGAG	1 cut(s)	948
BpuMI	CCSGG	2 cut(s)	335, 341
BsaAI	YACGTR	2 cut(s)	255, 261
BsaBI	GATNNNNATC	1 cut(s)	421
BsaHI	GRCGYC	4 cut(s)	132, 159, 177, 288
BsaI	GGTCTC	1 cut(s)	344
BsaJI	CCNNGG	3 cut(s)	172, 339, 543
BsaWI	WCCGGW	2 cut(s)	597, 814
BsaXI	ACNNNNNCTCC	4 cut(s)	149, 179, 826, 856
Bsc4I	CCNNNNNNNGG	2 cut(s)	340, 604
Bse118I	RCCGGY	3 cut(s)	589, 597, 888
Bse1I	ACTGG	1 cut(s)	796
Bse3DI	GCAATG	2 cut(s)	525, 729
Bse8I	GATNNNNATC	1 cut(s)	421
BseBI	CCWGG	1 cut(s)	317
BseDI	CCNNGG	3 cut(s)	172, 339, 543
BseJI	GATNNNNATC	1 cut(s)	421
BseLI	CCNNNNNNNGG	2 cut(s)	340, 604
BseMI	GCAATG	2 cut(s)	525, 729
BseMII	CTCAG	3 cut(s)	121, 735, 963
BseNI	ACTGG	1 cut(s)	796
BseRI	GAGGAG	2 cut(s)	80, 526
BseX3I	CGGCCG	1 cut(s)	890
BseXI	GCAGC	3 cut(s)	436, 444, 447
BseYI	CCCAGC	1 cut(s)	864
Bsh1236I	CGCG	3 cut(s)	51, 123, 479
Bsh1285I	CGRYCG	2 cut(s)	345, 893
BshFI	GGCC	6 cut(s)	5, 32, 150, 315, 338, 892
BshNI	GGYRCC	1 cut(s)	131
BshTI	ACCGGT	1 cut(s)	597
BsiEI	CGRYCG	2 cut(s)	345, 893
BsiHKAI	GWGCWC	1 cut(s)	303
BsiSI	CCGG	8 cut(s)	29, 190, 335, 341, 590, 598, 815, 889
BslFI	GGGAC	2 cut(s)	266, 685
BslI	CCNNNNNNNGG	2 cut(s)	340, 604
BsmAI	GTCTC	3 cut(s)	344, 468, 863
BsmBI	CGTCTC	1 cut(s)	468
BsmFI	GGGAC	2 cut(s)	266, 685
BsnI	GGCC	6 cut(s)	5, 32, 150, 315, 338, 892
Bso31I	GGTCTC	1 cut(s)	344
Bsp1286I	GDGCHC	1 cut(s)	303
Bsp143I	GATC	8 cut(s)	144, 192, 319, 330, 416, 516, 634, 676
BspANI	GGCC	6 cut(s)	5, 32, 150, 315, 338, 892
BspCNI	CTCAG	3 cut(s)	120, 736, 964
BspFNI	CGCG	3 cut(s)	51, 123, 479
BspLI	GGNNCC	3 cut(s)	133, 339, 825
BspPI	GGATC	7 cut(s)	200, 325, 327, 424, 524, 642, 684
BspT107I	GGYRCC	1 cut(s)	131
BspTNI	GGTCTC	1 cut(s)	344
BsrDI	GCAATG	2 cut(s)	525, 729
BsrFI	RCCGGY	3 cut(s)	589, 597, 888
BsrI	ACTGG	1 cut(s)	796
BssAI	RCCGGY	3 cut(s)	589, 597, 888
BssECI	CCNNGG	3 cut(s)	172, 339, 543
BssMI	GATC	8 cut(s)	144, 192, 319, 330, 416, 516, 634, 676
BssNI	GRCGYC	4 cut(s)	132, 159, 177, 288
Bst2UI	CCWGG	1 cut(s)	317
Bst4CI	ACNGT	3 cut(s)	139, 842, 874
Bst6I	CTCTTC	3 cut(s)	616, 653, 695
BstACI	GRCGYC	4 cut(s)	132, 159, 177, 288
BstBAI	YACGTR	2 cut(s)	255, 261
BstC8I	GCNNGC	3 cut(s)	71, 372, 591
BstDEI	CTNAG	3 cut(s)	107, 744, 972
BstFNI	CGCG	3 cut(s)	51, 123, 479
BstH2I	RGCGCY	2 cut(s)	135, 377
BstHHI	GCGC	4 cut(s)	134, 376, 385, 481
BstKTI	GATC	8 cut(s)	147, 195, 322, 333, 419, 519, 637, 679
BstMAI	GTCTC	3 cut(s)	344, 468, 863
BstMBI	GATC	8 cut(s)	144, 192, 319, 330, 416, 516, 634, 676
BstMCI	CGRYCG	2 cut(s)	345, 893
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 93, 129, 183, 380, 382, 719, 818, 928
BstNI	CCWGG	1 cut(s)	317
BstSCI	CCNGG	3 cut(s)	315, 333, 339
BstSFI	CTRYAG	1 cut(s)	61
BstUI	CGCG	3 cut(s)	51, 123, 479
BstV1I	GCAGC	3 cut(s)	436, 444, 447
BstV2I	GAAGAC	1 cut(s)	569
BstX2I	RGATCY	5 cut(s)	192, 319, 516, 634, 676
BstYI	RGATCY	5 cut(s)	192, 319, 516, 634, 676
BstZI	CGGCCG	1 cut(s)	890
BsuI	GTATCC	1 cut(s)	571
BsuRI	GGCC	6 cut(s)	5, 32, 150, 315, 338, 892
BtgZI	GCGATG	1 cut(s)	926
Cac8I	GCNNGC	3 cut(s)	71, 372, 591
CfoI	GCGC	4 cut(s)	134, 376, 385, 481
Cfr10I	RCCGGY	3 cut(s)	589, 597, 888
Cfr13I	GGNCC	2 cut(s)	337, 803
CseI	GACGC	6 cut(s)	166, 167, 211, 296, 485, 574
Csp6I	GTAC	3 cut(s)	256, 595, 898
CspAI	ACCGGT	1 cut(s)	597
CviQI	GTAC	3 cut(s)	256, 595, 898
DdeI	CTNAG	3 cut(s)	107, 744, 972
DinI	GGCGCC	1 cut(s)	133
DpnI	GATC	8 cut(s)	146, 194, 321, 332, 418, 518, 636, 678
DpnII	GATC	8 cut(s)	144, 192, 319, 330, 416, 516, 634, 676
EaeI	YGGCCR	2 cut(s)	30, 890
EagI	CGGCCG	1 cut(s)	890
Eam1104I	CTCTTC	3 cut(s)	616, 653, 695
EarI	CTCTTC	3 cut(s)	616, 653, 695
EciI	GGCGGA	3 cut(s)	173, 429, 590
Ecl136II	GAGCTC	1 cut(s)	301
EclXI	CGGCCG	1 cut(s)	890
Eco147I	AGGCCT	1 cut(s)	315
Eco24I	GRGCYC	1 cut(s)	303
Eco31I	GGTCTC	1 cut(s)	344
Eco47I	GGWCC	1 cut(s)	803
Eco52I	CGGCCG	1 cut(s)	890
Eco53kI	GAGCTC	1 cut(s)	301
Eco57I	CTGAAG	1 cut(s)	314
Eco72I	CACGTG	1 cut(s)	261
EcoICRI	GAGCTC	1 cut(s)	301
EcoRI	GAATTC	1 cut(s)	640
EcoRII	CCWGG	1 cut(s)	315
EcoT38I	GRGCYC	1 cut(s)	303
EgeI	GGCGCC	1 cut(s)	133
EheI	GGCGCC	1 cut(s)	133
Esp3I	CGTCTC	1 cut(s)	468
FaiI	YATR	2 cut(s)	522, 570
FalI	AAGNNNNNCTT	2 cut(s)	650, 682
FaqI	GGGAC	2 cut(s)	266, 685
FauI	CCCGC	2 cut(s)	53, 176
FblI	GTMKAC	2 cut(s)	18, 345
Fnu4HI	GCNGC	9 cut(s)	49, 67, 162, 187, 276, 450, 458, 461, 893
FriOI	GRGCYC	1 cut(s)	303
Fsp4HI	GCNGC	9 cut(s)	49, 67, 162, 187, 276, 450, 458, 461, 893
FspBI	CTAG	1 cut(s)	828
GlaI	GCGC	4 cut(s)	133, 375, 384, 480
GluI	GCNGC	9 cut(s)	49, 67, 162, 187, 276, 450, 458, 461, 893
GsaI	CCCAGC	1 cut(s)	868
HaeII	RGCGCY	2 cut(s)	135, 377
HaeIII	GGCC	6 cut(s)	5, 32, 150, 315, 338, 892
HapII	CCGG	8 cut(s)	29, 190, 335, 341, 590, 598, 815, 889
HgaI	GACGC	6 cut(s)	166, 167, 211, 296, 485, 574
HhaI	GCGC	4 cut(s)	134, 376, 385, 481
Hin1I	GRCGYC	4 cut(s)	132, 159, 177, 288
Hin6I	GCGC	4 cut(s)	132, 374, 383, 479
HinP1I	GCGC	4 cut(s)	132, 374, 383, 479
HincII	GTYRAC	4 cut(s)	19, 208, 346, 847
HindII	GTYRAC	4 cut(s)	19, 208, 346, 847
HindIII	AAGCTT	1 cut(s)	664
HinfI	GANTC	4 cut(s)	325, 422, 979, 985
HpaI	GTTAAC	1 cut(s)	847
HpaII	CCGG	8 cut(s)	29, 190, 335, 341, 590, 598, 815, 889
HphI	GGTGA	2 cut(s)	520, 559
Hpy166II	GTNNAC	5 cut(s)	19, 208, 258, 346, 847
Hpy188III	TCNNGA	4 cut(s)	142, 237, 394, 996
Hpy8I	GTNNAC	5 cut(s)	19, 208, 258, 346, 847
Hpy99I	CGWCG	8 cut(s)	20, 128, 131, 158, 161, 182, 227, 350
HpyAV	CCTTC	7 cut(s)	259, 289, 305, 499, 712, 769, 910
HpyCH4III	ACNGT	3 cut(s)	139, 842, 874
HpyCH4IV	ACGT	3 cut(s)	210, 254, 260
HpyCH4V	TGCA	2 cut(s)	753, 785
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 93, 129, 183, 380, 382, 719, 818, 928
HpyF3I	CTNAG	3 cut(s)	107, 744, 972
HpySE526I	ACGT	3 cut(s)	210, 254, 260
Hsp92I	GRCGYC	4 cut(s)	132, 159, 177, 288
HspAI	GCGC	4 cut(s)	132, 374, 383, 479
KasI	GGCGCC	1 cut(s)	131
KroI	GCCGGC	1 cut(s)	589
KroNI	GCCGGC	1 cut(s)	591
KspAI	GTTAAC	1 cut(s)	847
Kzo9I	GATC	8 cut(s)	144, 192, 319, 330, 416, 516, 634, 676
LmnI	GCTCC	7 cut(s)	101, 298, 306, 646, 817, 878, 919
Lsp1109I	GCAGC	3 cut(s)	436, 444, 447
MaeI	CTAG	1 cut(s)	828
MaeII	ACGT	3 cut(s)	210, 254, 260
MaeIII	GTNAC	1 cut(s)	884
MalI	GATC	8 cut(s)	146, 194, 321, 332, 418, 518, 636, 678
MboI	GATC	8 cut(s)	144, 192, 319, 330, 416, 516, 634, 676
MboII	GAAGA	7 cut(s)	320, 574, 633, 667, 670, 712, 988
MflI	RGATCY	5 cut(s)	192, 319, 516, 634, 676
MhlI	GDGCHC	1 cut(s)	303
MluCI	AATT	5 cut(s)	100, 388, 550, 640, 754
Mly113I	GGCGCC	1 cut(s)	132
MlyI	GAGTC	1 cut(s)	319
MmeI	TCCRAC	1 cut(s)	451
MroNI	GCCGGC	1 cut(s)	589
MroXI	GAANNNNTTC	2 cut(s)	269, 401
MseI	TTAA	2 cut(s)	83, 846
MspI	CCGG	8 cut(s)	29, 190, 335, 341, 590, 598, 815, 889
MspR9I	CCNGG	3 cut(s)	317, 335, 341
MvaI	CCWGG	1 cut(s)	317
MvnI	CGCG	3 cut(s)	51, 123, 479
MwoI	GCNNNNNNNGC	9 cut(s)	11, 93, 129, 183, 380, 382, 719, 818, 928
NaeI	GCCGGC	1 cut(s)	591
NarI	GGCGCC	1 cut(s)	132
NciI	CCSGG	2 cut(s)	335, 341
NdeII	GATC	8 cut(s)	144, 192, 319, 330, 416, 516, 634, 676
NgoMIV	GCCGGC	1 cut(s)	589
NlaIV	GGNNCC	3 cut(s)	133, 339, 825
NmeAIII	GCCGAG	1 cut(s)	153
PceI	AGGCCT	1 cut(s)	315
PcsI	WCGNNNNNNNCGW	3 cut(s)	135, 153, 680
PdiI	GCCGGC	1 cut(s)	591
PdmI	GAANNNNTTC	2 cut(s)	269, 401
PfeI	GAWTC	3 cut(s)	422, 979, 985
PflFI	GACNNNGTC	1 cut(s)	203
PinAI	ACCGGT	1 cut(s)	597
PkrI	GCNGC	9 cut(s)	50, 68, 163, 188, 277, 451, 459, 462, 894
PleI	GAGTC	1 cut(s)	319
PluTI	GGCGCC	1 cut(s)	135
PmaCI	CACGTG	1 cut(s)	261
PmlI	CACGTG	1 cut(s)	261
PpsI	GAGTC	1 cut(s)	319
Ppu21I	YACGTR	2 cut(s)	255, 261
Psp124BI	GAGCTC	1 cut(s)	303
Psp6I	CCWGG	1 cut(s)	315
PspCI	CACGTG	1 cut(s)	261
PspFI	CCCAGC	1 cut(s)	864
PspGI	CCWGG	1 cut(s)	315
PspN4I	GGNNCC	3 cut(s)	133, 339, 825
PspPI	GGNCC	2 cut(s)	337, 803
PsuI	RGATCY	5 cut(s)	192, 319, 516, 634, 676
PsyI	GACNNNGTC	1 cut(s)	203
RsaI	GTAC	3 cut(s)	257, 596, 899
RsaNI	GTAC	3 cut(s)	256, 595, 898
SacI	GAGCTC	1 cut(s)	303
SalI	GTCGAC	2 cut(s)	17, 344
SaqAI	TTAA	2 cut(s)	83, 846
SatI	GCNGC	9 cut(s)	49, 67, 162, 187, 276, 450, 458, 461, 893
Sau3AI	GATC	8 cut(s)	144, 192, 319, 330, 416, 516, 634, 676
Sau96I	GGNCC	2 cut(s)	337, 803
SchI	GAGTC	1 cut(s)	319
ScrFI	CCNGG	3 cut(s)	317, 335, 341
SduI	GDGCHC	1 cut(s)	303
SfcI	CTRYAG	1 cut(s)	61
SfoI	GGCGCC	1 cut(s)	133
SinI	GGWCC	1 cut(s)	803
SmlI	CTYRAG	1 cut(s)	963
SmoI	CTYRAG	1 cut(s)	963
Sse9I	AATT	5 cut(s)	100, 388, 550, 640, 754
SseBI	AGGCCT	1 cut(s)	315
SspDI	GGCGCC	1 cut(s)	131
SspMI	CTAG	1 cut(s)	828
SstI	GAGCTC	1 cut(s)	303
StuI	AGGCCT	1 cut(s)	315
StyD4I	CCNGG	3 cut(s)	315, 333, 339
TaaI	ACNGT	3 cut(s)	139, 842, 874
TaiI	ACGT	3 cut(s)	213, 257, 263
TaqI	TCGA	5 cut(s)	18, 153, 345, 425, 441
TasI	AATT	5 cut(s)	100, 388, 550, 640, 754
TauI	GCSGC	6 cut(s)	51, 69, 164, 189, 278, 895
TfiI	GAWTC	3 cut(s)	422, 979, 985
Tru1I	TTAA	2 cut(s)	83, 846
Tru9I	TTAA	2 cut(s)	83, 846
TseI	GCWGC	3 cut(s)	449, 457, 460
TspDTI	ATGAA	2 cut(s)	459, 929
TspGWI	ACGGA	1 cut(s)	689
Tth111I	GACNNNGTC	1 cut(s)	203
VpaK11BI	GGWCC	1 cut(s)	803
XapI	RAATTY	3 cut(s)	388, 550, 640
XmiI	GTMKAC	2 cut(s)	18, 345
XmnI	GAANNNNTTC	2 cut(s)	269, 401
XspI	CTAG	1 cut(s)	828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.