Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0000573

Physical Location & Seq

Genomic Coordinates Forward (+)

56458228 .. 56460833

Gene Structure 2606 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0428300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1281 bp

ATGGCTCTTCTCACTTTCCAACCAGAGGCCACAGAGCCCAAGAAGAAGAAGAAACAAGTCCAACCACAACCACCACCACCATCAAAACGCAGCCACCAAAAGCACTCCTCAAAAAAGCAGCAGCCACCTCCACAAAAGCCACCCTCCTCCTCATGGGACCATTTCAAGAACCTCCTCACCTGCAAGCAGATCGAGGGGTCGAGAGTCCACGACCCGTCCAAAAATGCAATCGGCTACTCCAAGCTCGGGTCCTCTTGCGGCTCCATATGCAGCTTCAGAGACGTTGTTCACGGCAACACTACTAGCCGGGTTGTTCACAGAGCCGATAACTCGCCGGACAGTAGCTCGCTGGGTCAGGAAACCGGGTTGCTCAGTCGGAAAGTTACAAACCGGTCCGAGTCAGGGTCAGGTACTAGATCCAACCGCGGTGGCGGTGCTGCTTATACGTCATCTAATTCGTCTAGAGGGATGCAATTCAGAAAGCTGTCGGGGTGTTACGAGTGCCATTACATCGTTGACCCTAGCAGGTACCCAGTTCCAAGGTCTACTATCTGTGCTTGCCCTCAGTGCGGAGAGATCTTCCCCAAATTGGAGAGCTTGGAACTTCACCAATCAATTCGCCATGCTGTATCGGAGCTAGGCGTGGAAGATTCCGGCAGAAACATTGTGGAGATAATCTTCAAATCGAGCTGGCTGAAGAAGGACAGTCCCATTTGCAGGATCGAACGGATACTGAAGGTCCAGAACACGCAGCGGACCATCCAACGTTTCGAGGACTGCCGCGACGCAGTGAAAAACCGTGCCCTGAACAGCACTAGAAAGAATCCCAGGTGCGCCGCCGACGGCAACGAGCTGCTGCGGTTCCACTGCACCAGCATCTCGTGCACGCTCGGCGCGCGTGGCTCTACAAACCTCTGCGGCTCCATCCCGGGCTGCGGGGTCTGCACGACCATCCGGCACGGCTTCCAAGGCGGTGGAGGATTAGAAGTTGGCAAGGGAGTGCGCACCACTGCCAGCAGCGGTAGGGCCCACGACTCGTTGCATTGTACGGACGGGCGCAGGGCCATGCTGGTGTGCCGCGTGATTGCCGGCAGGGTCAGGCACATTGCGGACGATGCGGCGGCTGAGGAGGAGGCTGCTGCCACCGCATCAGCTGGTGGGTCGTACGATTCCGTCGCCGGATACGCCGGAGTGTACTCGAATCTCGAGGAGCTGGTTGTGTTTAATCCGAGGGCGATCCTCCCGTGTTTCGTAGTTATTTACAAAGCTCTTGACTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006355 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0019219 GO:0019222 GO:0022402 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032875 GO:0032876 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045786 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051252 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1903506 GO:2000104 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E2F_TDP

Protein Analysis

426

Amino Acids

46.19

Weight (kDa)

9.38

Isoelectric Point (pI)

56.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48160 AT3G48160
fragaria_vesca	FvH4_3g21790 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330
malus_domestica	MD06G1181700.v1.1 MD14G1187600.v1.1
prunus_persica	Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1
pyrus_communis	pycom06g16070 pycom14g15550
rosa_chinensis	RchiOBHm_Chr2g0100091 RchiOBHm_Chr2g0131211 RchiOBHm_Chr2g0131231 RchiOBHm_Chr2g0155761 RchiOBHm_Chr5g0037341 RchiOBHm_Chr6g0286771 RchiOBHm_Chr7g0179801
rosa_laevigata	RLG00000005323 RLG00000033775
rosa_multiflora	Rmu_co8405049.1_g000002 Rmu_sc0003547.1_g000004 Rmu_sc0004156.1_g000008 Rmu_sc0007546.1_g000012 Rmu_sc0026307.1_g000001 Rmu_sc0032585.1_g000001 Rmu_ssc0000019.1_g000022
rosa_roxburghii	Rroxscaffold_1G00027620 Rroxscaffold_1G00027630 Rroxscaffold_1G00043630 Rroxscaffold_2G00107640 Rroxscaffold_3G00273460 Rroxscaffold_5G00347960 Rroxscaffold_5G00350580 Rroxscaffold_5G00366890 Rroxscaffold_6G00391730 Rroxscaffold_6G00392580 Rroxscaffold_7G00170270 Rroxscaffold_7G00170280
rosa_rugosa	Rorug02G0499800 Rorug04G0099000 Rorug04G0116000 Rorug05G0129300 Rorug05G0164200 Rorug06G0428300 Rorug06G0428400
rosa_samantha	Rh1DG306200 Rh2AG348600 Rh2CG139500 Rh2CG334400 Rh2CG334500 Rh2CG334700 Rh2DG139800 Rh2DG373800 Rh5BG255900 Rh5CG289000 Rh5DG264300 Rh5DG449300 Rh6AG295400 Rh6BG299400 Rh6CG299300 Rh6DG291200 Rh7AG028200 Rh7BG027100 Rh7BG173900 Rh7CG029000 Rh7DG028500
rosa_wichuraiana	Rw5G023500 Rw7G002240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	188
Acc16I	TGCGCA	1 cut(s)	1004
Acc36I	ACCTGC	2 cut(s)	188, 516
Acc65I	GGTACC	1 cut(s)	528
AccB1I	GGYRCC	1 cut(s)	528
AccI	GTMKAC	1 cut(s)	545
AccII	CGCG	5 cut(s)	426, 783, 896, 898, 1080
AclI	AACGTT	1 cut(s)	766
AclWI	GGATC	3 cut(s)	411, 728, 1231
AcuI	CTGAAG	3 cut(s)	259, 716, 755
AfaI	GTAC	5 cut(s)	412, 530, 1048, 1166, 1196
AfiI	CCNNNNNNNGG	8 cut(s)	25, 153, 246, 402, 569, 589, 717, 935
AgeI	ACCGGT	1 cut(s)	390
AgsI	TTSAA	2 cut(s)	166, 682
AjnI	CCWGG	1 cut(s)	827
Alw21I	GWGCWC	1 cut(s)	887
Alw26I	GTCTC	1 cut(s)	273
Alw44I	GTGCAC	1 cut(s)	883
AlwI	GGATC	3 cut(s)	411, 728, 1231
Ama87I	CYCGRG	3 cut(s)	245, 928, 1205
AoxI	GGCC	3 cut(s)	27, 1026, 1062
ApaI	GGGCCC	1 cut(s)	1030
ApaLI	GTGCAC	1 cut(s)	883
AsiGI	ACCGGT	1 cut(s)	390
Asp718I	GGTACC	1 cut(s)	528
AspLEI	GCGC	5 cut(s)	836, 896, 898, 1005, 1059
AspS9I	GGNCC	8 cut(s)	157, 249, 393, 739, 756, 1026, 1027, 1062
AsuC2I	CCSGG	4 cut(s)	308, 364, 929, 930
AsuHPI	GGTGA	2 cut(s)	169, 599
AvaI	CYCGRG	3 cut(s)	245, 928, 1205
AvaII	GGWCC	5 cut(s)	157, 249, 393, 739, 756
BaeGI	GKGCMC	3 cut(s)	805, 887, 1030
BanI	GGYRCC	1 cut(s)	528
BanII	GRGCYC	2 cut(s)	39, 1030
BauI	CACGAG	1 cut(s)	880
Bbv12I	GWGCWC	1 cut(s)	887
BbvCI	CCTCAGC	1 cut(s)	1125
BccI	CCATC	4 cut(s)	88, 767, 932, 959
BceAI	ACGGC	3 cut(s)	307, 859, 976
BcgI	CGANNNNNNTGC	2 cut(s)	172, 206
BciT130I	CCWGG	1 cut(s)	829
BciVI	GTATCC	2 cut(s)	723, 1175
BcnI	CCSGG	4 cut(s)	308, 364, 929, 930
BcoDI	GTCTC	1 cut(s)	273
BfaI	CTAG	6 cut(s)	303, 414, 462, 522, 638, 816
BfuAI	ACCTGC	2 cut(s)	188, 516
BfuI	GTATCC	2 cut(s)	723, 1175
BglII	AGATCT	1 cut(s)	576
Bme1390I	CCNGG	5 cut(s)	308, 364, 829, 929, 930
Bme18I	GGWCC	5 cut(s)	157, 249, 393, 739, 756
BmeT110I	CYCGRG	3 cut(s)	245, 928, 1205
BmgT120I	GGNCC	8 cut(s)	157, 249, 393, 739, 756, 1026, 1027, 1062
BmiI	GGNNCC	7 cut(s)	158, 250, 262, 530, 863, 922, 1028
BmrFI	CCNGG	5 cut(s)	308, 364, 829, 929, 930
BmrI	ACTGGG	1 cut(s)	527
BmsI	GCATC	4 cut(s)	459, 885, 1105, 1157
BmuI	ACTGGG	1 cut(s)	527
Bpu10I	CCTNAGC	1 cut(s)	1125
BpuMI	CCSGG	4 cut(s)	308, 364, 929, 930
BsaJI	CCNNGG	6 cut(s)	424, 539, 827, 928, 967, 1229
BsaWI	WCCGGW	1 cut(s)	390
Bsc4I	CCNNNNNNNGG	8 cut(s)	25, 153, 246, 402, 569, 589, 717, 935
Bse118I	RCCGGY	2 cut(s)	390, 1088
Bse1I	ACTGG	1 cut(s)	533
Bse3DI	GCAATG	1 cut(s)	1104
BseBI	CCWGG	1 cut(s)	829
BseDI	CCNNGG	6 cut(s)	424, 539, 827, 928, 967, 1229
BseGI	GGATG	4 cut(s)	474, 759, 924, 951
BseLI	CCNNNNNNNGG	8 cut(s)	25, 153, 246, 402, 569, 589, 717, 935
BseMI	GCAATG	1 cut(s)	1104
BseMII	CTCAG	3 cut(s)	385, 578, 1116
BseNI	ACTGG	1 cut(s)	533
BsePI	GCGCGC	1 cut(s)	894
BseRI	GAGGAG	7 cut(s)	97, 136, 139, 164, 1142, 1145, 1223
BseSI	GKGCMC	3 cut(s)	805, 887, 1030
BseYI	CCCAGC	1 cut(s)	349
BsgI	GTGCAG	2 cut(s)	853, 928
Bsh1236I	CGCG	5 cut(s)	426, 783, 896, 898, 1080
BshFI	GGCC	3 cut(s)	29, 1028, 1064
BshNI	GGYRCC	1 cut(s)	528
BshTI	ACCGGT	1 cut(s)	390
BsiHKAI	GWGCWC	1 cut(s)	887
BsiHKCI	CYCGRG	3 cut(s)	245, 928, 1205
BsiWI	CGTACG	1 cut(s)	1164
BslFI	GGGAC	2 cut(s)	170, 693
BslI	CCNNNNNNNGG	8 cut(s)	25, 153, 246, 402, 569, 589, 717, 935
BsmAI	GTCTC	1 cut(s)	273
BsmBI	CGTCTC	1 cut(s)	273
BsmFI	GGGAC	2 cut(s)	170, 693
BsnI	GGCC	3 cut(s)	29, 1028, 1064
BsoBI	CYCGRG	3 cut(s)	245, 928, 1205
Bsp120I	GGGCCC	1 cut(s)	1026
Bsp1286I	GDGCHC	4 cut(s)	39, 805, 887, 1030
Bsp143I	GATC	5 cut(s)	189, 416, 576, 720, 1236
BspANI	GGCC	3 cut(s)	29, 1028, 1064
BspCNI	CTCAG	3 cut(s)	384, 577, 1117
BspFNI	CGCG	5 cut(s)	426, 783, 896, 898, 1080
BspLI	GGNNCC	7 cut(s)	158, 250, 262, 530, 863, 922, 1028
BspMI	ACCTGC	2 cut(s)	188, 516
BspPI	GGATC	3 cut(s)	411, 728, 1231
BspQI	GCTCTTC	1 cut(s)	12
BspT107I	GGYRCC	1 cut(s)	528
BsrDI	GCAATG	1 cut(s)	1104
BsrFI	RCCGGY	2 cut(s)	390, 1088
BsrI	ACTGG	1 cut(s)	533
BssAI	RCCGGY	2 cut(s)	390, 1088
BssECI	CCNNGG	6 cut(s)	424, 539, 827, 928, 967, 1229
BssHII	GCGCGC	1 cut(s)	894
BssMI	GATC	5 cut(s)	189, 416, 576, 720, 1236
BssSI	CACGAG	1 cut(s)	880
BssT1I	CCWWGG	2 cut(s)	539, 967
Bst2BI	CACGAG	1 cut(s)	880
Bst2UI	CCWGG	1 cut(s)	829
Bst4CI	ACNGT	3 cut(s)	341, 707, 800
Bst6I	CTCTTC	1 cut(s)	12
BstAPI	GCANNNNNTGC	1 cut(s)	882
BstC8I	GCNNGC	8 cut(s)	185, 347, 559, 692, 887, 896, 1015, 1090
BstDEI	CTNAG	3 cut(s)	371, 564, 1125
BstDSI	CCRYGG	1 cut(s)	424
BstF5I	GGATG	4 cut(s)	474, 759, 924, 951
BstFNI	CGCG	5 cut(s)	426, 783, 896, 898, 1080
BstHHI	GCGC	5 cut(s)	836, 896, 898, 1005, 1059
BstKTI	GATC	5 cut(s)	192, 419, 579, 723, 1239
BstMAI	GTCTC	1 cut(s)	273
BstMBI	GATC	5 cut(s)	189, 416, 576, 720, 1236
BstNI	CCWGG	1 cut(s)	829
BstSCI	CCNGG	5 cut(s)	306, 362, 827, 927, 928
BstSLI	GKGCMC	3 cut(s)	805, 887, 1030
BstUI	CGCG	5 cut(s)	426, 783, 896, 898, 1080
BstX2I	RGATCY	2 cut(s)	416, 576
BstXI	CCANNNNNNTGG	1 cut(s)	974
BstYI	RGATCY	2 cut(s)	416, 576
BsuI	GTATCC	2 cut(s)	723, 1175
BsuRI	GGCC	3 cut(s)	29, 1028, 1064
BtgI	CCRYGG	1 cut(s)	424
BtsCI	GGATG	4 cut(s)	474, 759, 924, 951
BtsI	GCAGTG	3 cut(s)	795, 865, 1008
BtsIMutI	CAGTG	4 cut(s)	572, 795, 865, 1008
BveI	ACCTGC	2 cut(s)	188, 516
Cac8I	GCNNGC	8 cut(s)	185, 347, 559, 692, 887, 896, 1015, 1090
CfoI	GCGC	5 cut(s)	836, 896, 898, 1005, 1059
Cfr10I	RCCGGY	2 cut(s)	390, 1088
Cfr13I	GGNCC	8 cut(s)	157, 249, 393, 739, 756, 1026, 1027, 1062
Cfr42I	CCGCGG	1 cut(s)	427
Cfr9I	CCCGGG	1 cut(s)	928
CpoI	CGGWCCG	1 cut(s)	393
CseI	GACGC	1 cut(s)	794
Csp6I	GTAC	5 cut(s)	411, 529, 1047, 1165, 1195
CspAI	ACCGGT	1 cut(s)	390
CspCI	CAANNNNNGTGG	2 cut(s)	409, 444
CspI	CGGWCCG	1 cut(s)	393
CviAII	CATG	3 cut(s)	153, 623, 1066
CviQI	GTAC	5 cut(s)	411, 529, 1047, 1165, 1195
DdeI	CTNAG	3 cut(s)	371, 564, 1125
DpnI	GATC	5 cut(s)	191, 418, 578, 722, 1238
DpnII	GATC	5 cut(s)	189, 416, 576, 720, 1236
Eam1104I	CTCTTC	1 cut(s)	12
EarI	CTCTTC	1 cut(s)	12
Eco130I	CCWWGG	2 cut(s)	539, 967
Eco24I	GRGCYC	2 cut(s)	39, 1030
Eco47I	GGWCC	5 cut(s)	157, 249, 393, 739, 756
Eco57I	CTGAAG	3 cut(s)	259, 716, 755
Eco88I	CYCGRG	3 cut(s)	245, 928, 1205
EcoO109I	RGGNCCY	2 cut(s)	249, 1026
EcoRII	CCWGG	1 cut(s)	827
EcoT14I	CCWWGG	2 cut(s)	539, 967
EcoT38I	GRGCYC	2 cut(s)	39, 1030
ErhI	CCWWGG	2 cut(s)	539, 967
Esp3I	CGTCTC	1 cut(s)	273
FaeI	CATG	3 cut(s)	156, 626, 1069
FaiI	YATR	6 cut(s)	154, 266, 268, 444, 624, 1067
FaqI	GGGAC	2 cut(s)	170, 693
FatI	CATG	3 cut(s)	152, 622, 1065
FauI	CCCGC	1 cut(s)	929
FauNDI	CATATG	1 cut(s)	266
FblI	GTMKAC	1 cut(s)	545
FokI	GGATG	4 cut(s)	481, 746, 911, 938
FriOI	GRGCYC	2 cut(s)	39, 1030
FspAI	RTGCGCAY	1 cut(s)	1004
FspBI	CTAG	6 cut(s)	303, 414, 462, 522, 638, 816
FspI	TGCGCA	1 cut(s)	1004
GlaI	GCGC	5 cut(s)	835, 895, 897, 1004, 1058
GsaI	CCCAGC	1 cut(s)	353
HaeIII	GGCC	3 cut(s)	29, 1028, 1064
HgaI	GACGC	1 cut(s)	794
HhaI	GCGC	5 cut(s)	836, 896, 898, 1005, 1059
Hin1II	CATG	3 cut(s)	156, 626, 1069
Hin6I	GCGC	5 cut(s)	834, 894, 896, 1003, 1057
HinP1I	GCGC	5 cut(s)	834, 894, 896, 1003, 1057
HincII	GTYRAC	1 cut(s)	517
HindII	GTYRAC	1 cut(s)	517
HinfI	GANTC	8 cut(s)	204, 398, 650, 823, 1034, 1169, 1201, 1274
HphI	GGTGA	2 cut(s)	169, 599
Hpy166II	GTNNAC	7 cut(s)	208, 289, 316, 517, 546, 885, 1195
Hpy188I	TCNGA	6 cut(s)	278, 378, 397, 479, 634, 1230
Hpy188III	TCNNGA	7 cut(s)	166, 201, 356, 462, 742, 1205, 1271
Hpy8I	GTNNAC	7 cut(s)	208, 289, 316, 517, 546, 885, 1195
Hpy99I	CGWCG	3 cut(s)	788, 845, 1178
HpyAV	CCTTC	2 cut(s)	694, 730
HpyCH4III	ACNGT	3 cut(s)	341, 707, 800
HpyCH4IV	ACGT	3 cut(s)	282, 446, 766
HpyCH4V	TGCA	9 cut(s)	183, 227, 270, 472, 717, 870, 885, 945, 1042
HpyF3I	CTNAG	3 cut(s)	371, 564, 1125
HpySE526I	ACGT	3 cut(s)	282, 446, 766
Hsp92II	CATG	3 cut(s)	156, 626, 1069
HspAI	GCGC	5 cut(s)	834, 894, 896, 1003, 1057
KpnI	GGTACC	1 cut(s)	532
KroI	GCCGGC	1 cut(s)	1088
KroNI	GCCGGC	1 cut(s)	1090
KspI	CCGCGG	1 cut(s)	427
Kzo9I	GATC	5 cut(s)	189, 416, 576, 720, 1236
LguI	GCTCTTC	1 cut(s)	12
LmnI	GCTCC	4 cut(s)	266, 634, 926, 1210
LweI	GCATC	4 cut(s)	459, 885, 1105, 1157
MaeI	CTAG	6 cut(s)	303, 414, 462, 522, 638, 816
MaeII	ACGT	3 cut(s)	282, 446, 766
MaeIII	GTNAC	2 cut(s)	382, 494
MalI	GATC	5 cut(s)	191, 418, 578, 722, 1238
MboI	GATC	5 cut(s)	189, 416, 576, 720, 1236
MboII	GAAGA	7 cut(s)	55, 58, 61, 571, 659, 670, 709
MflI	RGATCY	2 cut(s)	416, 576
MhlI	GDGCHC	4 cut(s)	39, 805, 887, 1030
MluCI	AATT	4 cut(s)	454, 473, 587, 615
MlyI	GAGTC	4 cut(s)	213, 407, 1028, 1268
MmeI	TCCRAC	5 cut(s)	43, 85, 356, 444, 787
MroNI	GCCGGC	1 cut(s)	1088
MseI	TTAA	2 cut(s)	1224, 1279
MslI	CAYNNNNRTG	1 cut(s)	1070
MspA1I	CMGCKG	4 cut(s)	426, 754, 1020, 1154
MspR9I	CCNGG	5 cut(s)	308, 364, 829, 929, 930
MvaI	CCWGG	1 cut(s)	829
MvnI	CGCG	5 cut(s)	426, 783, 896, 898, 1080
NaeI	GCCGGC	1 cut(s)	1090
NciI	CCSGG	4 cut(s)	308, 364, 929, 930
NdeI	CATATG	1 cut(s)	266
NdeII	GATC	5 cut(s)	189, 416, 576, 720, 1236
NgoMIV	GCCGGC	1 cut(s)	1088
NlaIII	CATG	3 cut(s)	156, 626, 1069
NlaIV	GGNNCC	7 cut(s)	158, 250, 262, 530, 863, 922, 1028
NmeAIII	GCCGAG	1 cut(s)	870
NsbI	TGCGCA	1 cut(s)	1004
PaeR7I	CTCGAG	1 cut(s)	1205
PaqCI	CACCTGC	1 cut(s)	188
PauI	GCGCGC	1 cut(s)	894
PciSI	GCTCTTC	1 cut(s)	12
PdiI	GCCGGC	1 cut(s)	1090
PfeI	GAWTC	4 cut(s)	650, 823, 1169, 1201
Pfl23II	CGTACG	1 cut(s)	1164
PinAI	ACCGGT	1 cut(s)	390
PleI	GAGTC	4 cut(s)	212, 406, 1028, 1268
PpsI	GAGTC	4 cut(s)	212, 406, 1028, 1268
PpuMI	RGGWCCY	1 cut(s)	249
Psp1406I	AACGTT	1 cut(s)	766
Psp5II	RGGWCCY	1 cut(s)	249
Psp6I	CCWGG	1 cut(s)	827
PspFI	CCCAGC	1 cut(s)	349
PspGI	CCWGG	1 cut(s)	827
PspLI	CGTACG	1 cut(s)	1164
PspN4I	GGNNCC	7 cut(s)	158, 250, 262, 530, 863, 922, 1028
PspOMI	GGGCCC	1 cut(s)	1026
PspPI	GGNCC	8 cut(s)	157, 249, 393, 739, 756, 1026, 1027, 1062
PspPPI	RGGWCCY	1 cut(s)	249
PsuI	RGATCY	2 cut(s)	416, 576
PteI	GCGCGC	1 cut(s)	894
PvuII	CAGCTG	1 cut(s)	1154
RsaI	GTAC	5 cut(s)	412, 530, 1048, 1166, 1196
RsaNI	GTAC	5 cut(s)	411, 529, 1047, 1165, 1195
RseI	CAYNNNNRTG	1 cut(s)	1070
Rsr2I	CGGWCCG	1 cut(s)	393
RsrII	CGGWCCG	1 cut(s)	393
SacII	CCGCGG	1 cut(s)	427
SapI	GCTCTTC	1 cut(s)	12
SaqAI	TTAA	2 cut(s)	1224, 1279
Sau3AI	GATC	5 cut(s)	189, 416, 576, 720, 1236
Sau96I	GGNCC	8 cut(s)	157, 249, 393, 739, 756, 1026, 1027, 1062
SchI	GAGTC	4 cut(s)	213, 407, 1028, 1268
ScrFI	CCNGG	5 cut(s)	308, 364, 829, 929, 930
SduI	GDGCHC	4 cut(s)	39, 805, 887, 1030
SfaNI	GCATC	4 cut(s)	459, 885, 1105, 1157
Sfr274I	CTCGAG	1 cut(s)	1205
Sfr303I	CCGCGG	1 cut(s)	427
SgrBI	CCGCGG	1 cut(s)	427
SinI	GGWCC	5 cut(s)	157, 249, 393, 739, 756
SlaI	CTCGAG	1 cut(s)	1205
SmaI	CCCGGG	1 cut(s)	930
SmiMI	CAYNNNNRTG	1 cut(s)	1070
SmlI	CTYRAG	1 cut(s)	1205
SmoI	CTYRAG	1 cut(s)	1205
Sse9I	AATT	4 cut(s)	454, 473, 587, 615
SspMI	CTAG	6 cut(s)	303, 414, 462, 522, 638, 816
StyD4I	CCNGG	5 cut(s)	306, 362, 827, 927, 928
StyI	CCWWGG	2 cut(s)	539, 967
TaaI	ACNGT	3 cut(s)	341, 707, 800
TaiI	ACGT	3 cut(s)	285, 449, 769
TaqI	TCGA	7 cut(s)	192, 200, 686, 723, 771, 1199, 1206
TasI	AATT	4 cut(s)	454, 473, 587, 615
TatI	WGTACW	1 cut(s)	1194
TauI	GCSGC	7 cut(s)	261, 783, 839, 921, 1080, 1121, 1124
TfiI	GAWTC	4 cut(s)	650, 823, 1169, 1201
Tru1I	TTAA	2 cut(s)	1224, 1279
Tru9I	TTAA	2 cut(s)	1224, 1279
TscAI	CASTG	4 cut(s)	572, 795, 872, 1015
TspGWI	ACGGA	3 cut(s)	742, 1064, 1162
TspMI	CCCGGG	1 cut(s)	928
TspRI	CASTG	4 cut(s)	572, 795, 872, 1015
VneI	GTGCAC	1 cut(s)	883
VpaK11BI	GGWCC	5 cut(s)	157, 249, 393, 739, 756
XbaI	TCTAGA	1 cut(s)	461
XhoI	CTCGAG	1 cut(s)	1205
XmaI	CCCGGG	1 cut(s)	928
XmiI	GTMKAC	1 cut(s)	545
XspI	CTAG	6 cut(s)	303, 414, 462, 522, 638, 816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.