Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0000573

Physical Location & Seq

Genomic Coordinates Forward (+)

49225467 .. 49226336

Gene Structure 870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG295400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 870 bp

ATGGATTTGTGGATTTGTGAGCTCTCTCTAAACCATGGCCACTTCCTCCTACCTGGAAACCCCCAGACGTCAAGAAAGTCCAAGAACACGTACACGTGGAAGGGTTTCGGCGCGGTCCCTAATGCCCTGAAAGAGCTCAAAGAAGAAGGCCTGGATCTGATTCCTATCTCGGCGGCCTGCAATAACAACAACAACAATCCCCTGGATGAGACCAAGAGGGAAAAGTCTCTGGCGCTTCTGGCGCAGAATTTCGTGAAGCTGTTCGTGTGTACCGGATCGAAATCAGAATCGATTTCTCTTGATGAAGCTGCAAAATTACTGCTTGGAGTAGGGGATGCACAGAATGTATCGGTGATGAGGACGAAGGTGAGGAGGATCTATGACATTGCGAATGTGTTGTCGTCGGTGAATTTGATTGAGAAGACTCATACTGCGGATACAGGGAAGTCGGCGTGCAGGTGGTTGGGGCTGAATGGGAGAAGAGACGGTTTGAATTTGAATTTGGAGCCGAATTTGGAGCAGTCTAAGAAGAGGAGCTTTGGGATAGATCTGATGAAAGCGAGTAGTAAGAGGAGCAAGGTTGTGGAGAAGAGAGTTCAAGATCAGGGTGAGGTTGAGAACTGCAATTCGGATGGCTGTGGGGCGAATGAGAGTTCGAAGAGCTACCAGTTTGGTCCTTTCGCTCCGGTGGCGGTTCTAAGAGATAGGAAGGGTGTTGACATTAACAAGGTTTGCTGGGAGAGTCTTGGGTCTTATTATCGGCCTCAGTATCAGAACCAAGTGATGAAGGAGTTGTTTTCACATTATAGCGACGCGTGGATGTTGTGGAACTCTCAAGTTGCTGAGAAGAATCCAATTCAGAGTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006355 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0019219 GO:0019222 GO:0022402 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032875 GO:0032876 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045786 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051252 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1903506 GO:2000104 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E2F_TDP

Protein Analysis

289

Amino Acids

32.26

Weight (kDa)

8.86

Isoelectric Point (pI)

42.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_E2F_TDP	PF02319	73 - 156	1.2e-17	E2F/DP family winged-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48160 AT3G48160
fragaria_vesca	FvH4_3g21790 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330
malus_domestica	MD06G1181700.v1.1 MD14G1187600.v1.1
prunus_persica	Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1
pyrus_communis	pycom06g16070 pycom14g15550
rosa_chinensis	RchiOBHm_Chr2g0100091 RchiOBHm_Chr2g0131211 RchiOBHm_Chr2g0131231 RchiOBHm_Chr2g0155761 RchiOBHm_Chr5g0037341 RchiOBHm_Chr6g0286771 RchiOBHm_Chr7g0179801
rosa_laevigata	RLG00000005323 RLG00000033775
rosa_multiflora	Rmu_co8405049.1_g000002 Rmu_sc0003547.1_g000004 Rmu_sc0004156.1_g000008 Rmu_sc0007546.1_g000012 Rmu_sc0026307.1_g000001 Rmu_sc0032585.1_g000001 Rmu_ssc0000019.1_g000022
rosa_roxburghii	Rroxscaffold_1G00027620 Rroxscaffold_1G00027630 Rroxscaffold_1G00043630 Rroxscaffold_2G00107640 Rroxscaffold_3G00273460 Rroxscaffold_5G00347960 Rroxscaffold_5G00350580 Rroxscaffold_5G00366890 Rroxscaffold_6G00391730 Rroxscaffold_6G00392580 Rroxscaffold_7G00170270 Rroxscaffold_7G00170280
rosa_rugosa	Rorug02G0499800 Rorug04G0099000 Rorug04G0116000 Rorug05G0129300 Rorug05G0164200 Rorug06G0428300 Rorug06G0428400
rosa_samantha	Rh1DG306200 Rh2AG348600 Rh2CG139500 Rh2CG334400 Rh2CG334500 Rh2CG334700 Rh2DG139800 Rh2DG373800 Rh5BG255900 Rh5CG289000 Rh5DG264300 Rh5DG449300 Rh6AG295400 Rh6BG299400 Rh6CG299300 Rh6DG291200 Rh7AG028200 Rh7BG027100 Rh7BG173900 Rh7CG029000 Rh7DG028500
rosa_wichuraiana	Rw5G023500 Rw7G002240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	447
AatII	GACGTC	1 cut(s)	71
Acc36I	ACCTGC	1 cut(s)	447
AccII	CGCG	2 cut(s)	113, 815
AciI	CCGC	4 cut(s)	113, 173, 434, 692
AclWI	GGATC	3 cut(s)	162, 283, 383
AcoI	YGGCCR	1 cut(s)	37
AcsI	RAATTY	5 cut(s)	247, 409, 493, 499, 511
AcvI	CACGTG	1 cut(s)	96
AcyI	GRCGYC	1 cut(s)	68
AfaI	GTAC	2 cut(s)	92, 271
AflIII	ACRYGT	3 cut(s)	87, 93, 813
AgsI	TTSAA	3 cut(s)	493, 499, 599
AjnI	CCWGG	3 cut(s)	52, 150, 201
AjuI	GAANNNNNNNTTGG	3 cut(s)	485, 517, 847
AluBI	AGCT	6 cut(s)	22, 136, 259, 308, 537, 663
AluI	AGCT	6 cut(s)	22, 136, 259, 308, 537, 663
Alw21I	GWGCWC	2 cut(s)	24, 138
Alw26I	GTCTC	3 cut(s)	203, 231, 477
AlwI	GGATC	3 cut(s)	162, 283, 383
AoxI	GGCC	4 cut(s)	37, 148, 174, 761
ApeKI	GCWGC	1 cut(s)	308
ApoI	RAATTY	5 cut(s)	247, 409, 493, 499, 511
ArsI	GACNNNNNNTTYG	2 cut(s)	383, 415
Asp700I	GAANNNNTTC	2 cut(s)	104, 260
AspLEI	GCGC	3 cut(s)	113, 235, 244
AspS9I	GGNCC	2 cut(s)	115, 674
AsuHPI	GGTGA	4 cut(s)	364, 379, 418, 620
AsuII	TTCGAA	1 cut(s)	656
AvaII	GGWCC	2 cut(s)	115, 674
BalI	TGGCCA	1 cut(s)	39
BanII	GRGCYC	2 cut(s)	24, 138
BbrPI	CACGTG	1 cut(s)	96
BbsI	GAAGAC	1 cut(s)	428
Bbv12I	GWGCWC	2 cut(s)	24, 138
BbvI	GCAGC	1 cut(s)	295
BccI	CCATC	1 cut(s)	626
BciT130I	CCWGG	3 cut(s)	54, 152, 203
BciVI	GTATCC	1 cut(s)	430
BcoDI	GTCTC	3 cut(s)	203, 231, 477
BfoI	RGCGCY	1 cut(s)	236
BfuAI	ACCTGC	1 cut(s)	447
BfuI	GTATCC	1 cut(s)	430
BglII	AGATCT	1 cut(s)	547
BisI	GCNGC	2 cut(s)	174, 309
BlsI	GCNGC	2 cut(s)	175, 310
Bme1390I	CCNGG	3 cut(s)	54, 152, 203
Bme18I	GGWCC	2 cut(s)	115, 674
BmgT120I	GGNCC	2 cut(s)	115, 674
BmiI	GGNNCC	2 cut(s)	117, 507
BmrFI	CCNGG	3 cut(s)	54, 152, 203
BmsI	GCATC	1 cut(s)	325
BpiI	GAAGAC	1 cut(s)	428
Bpu14I	TTCGAA	1 cut(s)	656
BpuEI	CTTGAG	1 cut(s)	819
Bsa29I	ATCGAT	1 cut(s)	290
BsaAI	YACGTR	2 cut(s)	90, 96
BsaBI	GATNNNNATC	2 cut(s)	164, 280
BsaHI	GRCGYC	1 cut(s)	68
BsaI	GGTCTC	1 cut(s)	203
BsaJI	CCNNGG	2 cut(s)	34, 201
BsaWI	WCCGGW	2 cut(s)	272, 685
Bse1I	ACTGG	1 cut(s)	667
Bse3DI	GCAATG	1 cut(s)	384
Bse8I	GATNNNNATC	2 cut(s)	164, 280
BseBI	CCWGG	3 cut(s)	54, 152, 203
BseCI	ATCGAT	1 cut(s)	290
BseDI	CCNNGG	2 cut(s)	34, 201
BseGI	GGATG	4 cut(s)	211, 340, 637, 825
BseJI	GATNNNNATC	2 cut(s)	164, 280
BseMI	GCAATG	1 cut(s)	384
BseMII	CTCAG	2 cut(s)	779, 834
BseNI	ACTGG	1 cut(s)	667
BseRI	GAGGAG	3 cut(s)	385, 547, 586
BseXI	GCAGC	1 cut(s)	295
BseYI	CCCAGC	1 cut(s)	735
BsgI	GTGCAG	1 cut(s)	475
Bsh1236I	CGCG	2 cut(s)	113, 815
BshFI	GGCC	4 cut(s)	39, 150, 176, 763
BshVI	ATCGAT	1 cut(s)	290
BsiHKAI	GWGCWC	2 cut(s)	24, 138
BsiSI	CCGG	2 cut(s)	273, 686
BslFI	GGGAC	1 cut(s)	101
BsmAI	GTCTC	3 cut(s)	203, 231, 477
BsmBI	CGTCTC	1 cut(s)	477
BsmFI	GGGAC	1 cut(s)	101
BsnI	GGCC	4 cut(s)	39, 150, 176, 763
Bso31I	GGTCTC	1 cut(s)	203
Bsp119I	TTCGAA	1 cut(s)	656
Bsp1286I	GDGCHC	2 cut(s)	24, 138
Bsp143I	GATC	5 cut(s)	154, 275, 375, 547, 601
Bsp19I	CCATGG	1 cut(s)	34
BspACI	CCGC	4 cut(s)	113, 173, 434, 692
BspANI	GGCC	4 cut(s)	39, 150, 176, 763
BspCNI	CTCAG	2 cut(s)	778, 835
BspDI	ATCGAT	1 cut(s)	290
BspFNI	CGCG	2 cut(s)	113, 815
BspLI	GGNNCC	2 cut(s)	117, 507
BspMI	ACCTGC	1 cut(s)	447
BspPI	GGATC	3 cut(s)	162, 283, 383
BspQI	GCTCTTC	1 cut(s)	653
BspT104I	TTCGAA	1 cut(s)	656
BspTNI	GGTCTC	1 cut(s)	203
BsrDI	GCAATG	1 cut(s)	384
BsrI	ACTGG	1 cut(s)	667
BssECI	CCNNGG	2 cut(s)	34, 201
BssMI	GATC	5 cut(s)	154, 275, 375, 547, 601
BssNI	GRCGYC	1 cut(s)	68
BssT1I	CCWWGG	1 cut(s)	34
Bst2UI	CCWGG	3 cut(s)	54, 152, 203
Bst4CI	ACNGT	1 cut(s)	488
Bst6I	CTCTTC	4 cut(s)	475, 524, 584, 653
BstACI	GRCGYC	1 cut(s)	68
BstBAI	YACGTR	2 cut(s)	90, 96
BstBI	TTCGAA	1 cut(s)	656
BstC8I	GCNNGC	2 cut(s)	178, 454
BstDEI	CTNAG	4 cut(s)	525, 698, 765, 843
BstDSI	CCRYGG	1 cut(s)	34
BstF5I	GGATG	4 cut(s)	211, 340, 637, 825
BstFNI	CGCG	2 cut(s)	113, 815
BstH2I	RGCGCY	1 cut(s)	236
BstHHI	GCGC	3 cut(s)	113, 235, 244
BstKTI	GATC	5 cut(s)	157, 278, 378, 550, 604
BstMAI	GTCTC	3 cut(s)	203, 231, 477
BstMBI	GATC	5 cut(s)	154, 275, 375, 547, 601
BstMWI	GCNNNNNNNGC	3 cut(s)	239, 241, 689
BstNI	CCWGG	3 cut(s)	54, 152, 203
BstSCI	CCNGG	3 cut(s)	52, 150, 201
BstUI	CGCG	2 cut(s)	113, 815
BstV1I	GCAGC	1 cut(s)	295
BstV2I	GAAGAC	1 cut(s)	428
BstX2I	RGATCY	3 cut(s)	154, 375, 547
BstYI	RGATCY	3 cut(s)	154, 375, 547
Bsu15I	ATCGAT	1 cut(s)	290
BsuI	GTATCC	1 cut(s)	430
BsuRI	GGCC	4 cut(s)	39, 150, 176, 763
BsuTUI	ATCGAT	1 cut(s)	290
BtgI	CCRYGG	1 cut(s)	34
BtsCI	GGATG	4 cut(s)	211, 340, 637, 825
BveI	ACCTGC	1 cut(s)	447
Cac8I	GCNNGC	2 cut(s)	178, 454
CfoI	GCGC	3 cut(s)	113, 235, 244
Cfr13I	GGNCC	2 cut(s)	115, 674
ClaI	ATCGAT	1 cut(s)	290
CseI	GACGC	1 cut(s)	821
Csp6I	GTAC	2 cut(s)	91, 270
CviAII	CATG	1 cut(s)	35
CviQI	GTAC	2 cut(s)	91, 270
DdeI	CTNAG	4 cut(s)	525, 698, 765, 843
DpnI	GATC	5 cut(s)	156, 277, 377, 549, 603
DpnII	GATC	5 cut(s)	154, 275, 375, 547, 601
EaeI	YGGCCR	1 cut(s)	37
Eam1104I	CTCTTC	4 cut(s)	475, 524, 584, 653
EarI	CTCTTC	4 cut(s)	475, 524, 584, 653
Ecl136II	GAGCTC	2 cut(s)	22, 136
Eco130I	CCWWGG	1 cut(s)	34
Eco147I	AGGCCT	1 cut(s)	150
Eco24I	GRGCYC	2 cut(s)	24, 138
Eco31I	GGTCTC	1 cut(s)	203
Eco47I	GGWCC	2 cut(s)	115, 674
Eco53kI	GAGCTC	2 cut(s)	22, 136
Eco72I	CACGTG	1 cut(s)	96
EcoICRI	GAGCTC	2 cut(s)	22, 136
EcoRII	CCWGG	3 cut(s)	52, 150, 201
EcoT14I	CCWWGG	1 cut(s)	34
EcoT38I	GRGCYC	2 cut(s)	24, 138
ErhI	CCWWGG	1 cut(s)	34
Esp3I	CGTCTC	1 cut(s)	477
FaeI	CATG	1 cut(s)	38
FaiI	YATR	4 cut(s)	36, 381, 429, 807
FalI	AAGNNNNNCTT	2 cut(s)	521, 553
FaqI	GGGAC	1 cut(s)	101
FatI	CATG	1 cut(s)	34
Fnu4HI	GCNGC	2 cut(s)	174, 309
FokI	GGATG	4 cut(s)	218, 347, 644, 832
FriOI	GRGCYC	2 cut(s)	24, 138
Fsp4HI	GCNGC	2 cut(s)	174, 309
GlaI	GCGC	3 cut(s)	112, 234, 243
GluI	GCNGC	2 cut(s)	174, 309
GsaI	CCCAGC	1 cut(s)	739
HaeII	RGCGCY	1 cut(s)	236
HaeIII	GGCC	4 cut(s)	39, 150, 176, 763
HapII	CCGG	2 cut(s)	273, 686
HgaI	GACGC	1 cut(s)	821
HhaI	GCGC	3 cut(s)	113, 235, 244
Hin1I	GRCGYC	1 cut(s)	68
Hin1II	CATG	1 cut(s)	38
Hin6I	GCGC	3 cut(s)	111, 233, 242
HinP1I	GCGC	3 cut(s)	111, 233, 242
HincII	GTYRAC	1 cut(s)	718
HindII	GTYRAC	1 cut(s)	718
HinfI	GANTC	5 cut(s)	160, 287, 424, 742, 850
HpaII	CCGG	2 cut(s)	273, 686
HphI	GGTGA	4 cut(s)	364, 379, 418, 620
Hpy166II	GTNNAC	3 cut(s)	93, 270, 718
Hpy188I	TCNGA	6 cut(s)	159, 286, 552, 631, 774, 861
Hpy188III	TCNNGA	5 cut(s)	72, 253, 299, 599, 867
Hpy8I	GTNNAC	3 cut(s)	93, 270, 718
Hpy99I	CGWCG	2 cut(s)	406, 815
HpyAV	CCTTC	5 cut(s)	94, 140, 358, 703, 781
HpyCH4III	ACNGT	1 cut(s)	488
HpyCH4IV	ACGT	3 cut(s)	68, 89, 95
HpyCH4V	TGCA	5 cut(s)	180, 311, 338, 456, 624
HpyF10VI	GCNNNNNNNGC	3 cut(s)	239, 241, 689
HpyF3I	CTNAG	4 cut(s)	525, 698, 765, 843
HpySE526I	ACGT	3 cut(s)	68, 89, 95
Hsp92I	GRCGYC	1 cut(s)	68
Hsp92II	CATG	1 cut(s)	38
HspAI	GCGC	3 cut(s)	111, 233, 242
Kzo9I	GATC	5 cut(s)	154, 275, 375, 547, 601
LguI	GCTCTTC	1 cut(s)	653
LmnI	GCTCC	5 cut(s)	505, 517, 534, 573, 688
Lsp1109I	GCAGC	1 cut(s)	295
LweI	GCATC	1 cut(s)	325
MaeII	ACGT	3 cut(s)	68, 89, 95
MalI	GATC	5 cut(s)	156, 277, 377, 549, 603
MboI	GATC	5 cut(s)	154, 275, 375, 547, 601
MboII	GAAGA	7 cut(s)	155, 433, 492, 541, 601, 670, 859
MflI	RGATCY	3 cut(s)	154, 375, 547
MhlI	GDGCHC	2 cut(s)	24, 138
MlsI	TGGCCA	1 cut(s)	39
MluCI	AATT	8 cut(s)	247, 314, 409, 493, 499, 511, 625, 855
MluI	ACGCGT	1 cut(s)	813
MluNI	TGGCCA	1 cut(s)	39
MlyI	GAGTC	2 cut(s)	418, 751
MnlI	CCTC	9 cut(s)	56, 210, 351, 363, 366, 525, 564, 604, 774
Mox20I	TGGCCA	1 cut(s)	39
MroXI	GAANNNNTTC	2 cut(s)	104, 260
MscI	TGGCCA	1 cut(s)	39
MseI	TTAA	1 cut(s)	723
Msp20I	TGGCCA	1 cut(s)	39
MspI	CCGG	2 cut(s)	273, 686
MspR9I	CCNGG	3 cut(s)	54, 152, 203
MvaI	CCWGG	3 cut(s)	54, 152, 203
MvnI	CGCG	2 cut(s)	113, 815
MwoI	GCNNNNNNNGC	3 cut(s)	239, 241, 689
NcoI	CCATGG	1 cut(s)	34
NdeII	GATC	5 cut(s)	154, 275, 375, 547, 601
NlaIII	CATG	1 cut(s)	38
NlaIV	GGNNCC	2 cut(s)	117, 507
NmeAIII	GCCGAG	1 cut(s)	149
NspV	TTCGAA	1 cut(s)	656
PaqCI	CACCTGC	1 cut(s)	447
PceI	AGGCCT	1 cut(s)	150
PciSI	GCTCTTC	1 cut(s)	653
PdmI	GAANNNNTTC	2 cut(s)	104, 260
PfeI	GAWTC	3 cut(s)	160, 287, 850
PkrI	GCNGC	2 cut(s)	175, 310
PleI	GAGTC	2 cut(s)	418, 750
PmaCI	CACGTG	1 cut(s)	96
PmlI	CACGTG	1 cut(s)	96
PpsI	GAGTC	2 cut(s)	418, 750
Ppu21I	YACGTR	2 cut(s)	90, 96
Psp124BI	GAGCTC	2 cut(s)	24, 138
Psp6I	CCWGG	3 cut(s)	52, 150, 201
PspCI	CACGTG	1 cut(s)	96
PspFI	CCCAGC	1 cut(s)	735
PspGI	CCWGG	3 cut(s)	52, 150, 201
PspN4I	GGNNCC	2 cut(s)	117, 507
PspPI	GGNCC	2 cut(s)	115, 674
PsuI	RGATCY	3 cut(s)	154, 375, 547
RsaI	GTAC	2 cut(s)	92, 271
RsaNI	GTAC	2 cut(s)	91, 270
SacI	GAGCTC	2 cut(s)	24, 138
SapI	GCTCTTC	1 cut(s)	653
SaqAI	TTAA	1 cut(s)	723
SatI	GCNGC	2 cut(s)	174, 309
Sau3AI	GATC	5 cut(s)	154, 275, 375, 547, 601
Sau96I	GGNCC	2 cut(s)	115, 674
SchI	GAGTC	2 cut(s)	418, 751
ScrFI	CCNGG	3 cut(s)	54, 152, 203
SduI	GDGCHC	2 cut(s)	24, 138
SfaNI	GCATC	1 cut(s)	325
SfuI	TTCGAA	1 cut(s)	656
SinI	GGWCC	2 cut(s)	115, 674
SmlI	CTYRAG	1 cut(s)	834
SmoI	CTYRAG	1 cut(s)	834
Sse9I	AATT	8 cut(s)	247, 314, 409, 493, 499, 511, 625, 855
SseBI	AGGCCT	1 cut(s)	150
SsiI	CCGC	4 cut(s)	113, 173, 434, 692
SstI	GAGCTC	2 cut(s)	24, 138
StuI	AGGCCT	1 cut(s)	150
StyD4I	CCNGG	3 cut(s)	52, 150, 201
StyI	CCWWGG	1 cut(s)	34
TaaI	ACNGT	1 cut(s)	488
TaiI	ACGT	3 cut(s)	71, 92, 98
TaqI	TCGA	3 cut(s)	278, 290, 656
TasI	AATT	8 cut(s)	247, 314, 409, 493, 499, 511, 625, 855
TauI	GCSGC	1 cut(s)	176
TfiI	GAWTC	3 cut(s)	160, 287, 850
Tru1I	TTAA	1 cut(s)	723
Tru9I	TTAA	1 cut(s)	723
TseI	GCWGC	1 cut(s)	308
TspDTI	ATGAA	3 cut(s)	318, 569, 800
VpaK11BI	GGWCC	2 cut(s)	115, 674
XapI	RAATTY	5 cut(s)	247, 409, 493, 499, 511
XmnI	GAANNNNTTC	2 cut(s)	104, 260
ZraI	GACGTC	1 cut(s)	69

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.