Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000573

Physical Location & Seq

Genomic Coordinates Reverse (-)

33133089 .. 33134135

Gene Structure 1047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G023500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1047 bp

ATGTCCTCCTCCTCCGCCGCCGCCGTCGATCGTCCTCCAGCCACCACCACCACCACCCGCCGCGACGCCTCCTACAGCCGAAAGCAGAAGTCCCTGAGCCTCCTCTGCTCCAATTTCCTCAGCCTCTACAACCGCGACGACGGCGCCACAGCCCTGATCGGCCTCGACGACGCCGCCTCGCGCCTCGGCGTCGTCCGCCGCCGGATCTACGACATTGTCAACGTGCTGGAGAGCGTCGGACTGCTGTCAAGAAAGTCGAAGAACACGTACACGTGGAAGGGTTTCGGCGCGGTCCCTAACGCCCTGAAGGAGCTCAGAGAAGAAGGCCTGGATCTGACTCCGATCCCGGCTGCCTGCAACAACAACAACAACCCCCAGGATGAGACCAAGAGGGAAAAGTCTCTGGCGCTTCTGGCTCAGAATTTCGTGAAGCTGTTCGTGTGTACCGGATCGGAATCGGAATCGATTTCTCTTGATGAAGCAGCGAAATTACTGCTTGGAGTAGGGGATCCACAGAATGTATCGGTGATGAGGACAAAGGTGAGGAGGATCTATGACATTGCGAATGTGTTATCGTCGGTGAATTTGATTGAGAAGACTCATACGGCGGATACAGGGAAGCCGGCGTACAGGTGGTTGGGGCTGAATGGGAGAAGAGATGGTTTGAATTTGAATTCGGAGCCGAATTCGGAGCAGGCTAAGAAGAGGAGCTTTGGGACAGATCTGACGAATGCGAGTAGTAAGAGGAGCAAGGTTGTGGAGAAGAGAGTTCAAGATCAGGGTGAGGTTGAGAACTGCAATTCGGATGGCGGTGGTGGGGCGAAGGAGAGTTCGAAGAGCTACCAGTTTGGTCCTTTTGCTCCGGTGGCGGTTCCAAGAGCTAGGAAGGGTGTTGACGTCAACAAGGTTTGCTGGGAGAGTTTGGGGGCTTATTATCGGCCTCAGTATCAGAACCAAGCGATGAAGGAGCTGTTTTCGCATTATAGGGAAGCGTGGATGTTGTGGAACTCTCAAGTTGCTGATAAGAATCCAATTCAGAGTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006355 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0019219 GO:0019222 GO:0022402 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032875 GO:0032876 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045786 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051252 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1903506 GO:2000104 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E2F_TDP

Protein Analysis

348

Amino Acids

38.35

Weight (kDa)

9.36

Isoelectric Point (pI)

49.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_E2F_TDP	PF02319	28 - 94	8.5e-22	E2F/DP family winged-helix DNA-binding domain
WHD_E2F_TDP	PF02319	131 - 214	2.3e-18	E2F/DP family winged-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48160 AT3G48160
fragaria_vesca	FvH4_3g21790 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330
malus_domestica	MD06G1181700.v1.1 MD14G1187600.v1.1
prunus_persica	Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1
pyrus_communis	pycom06g16070 pycom14g15550
rosa_chinensis	RchiOBHm_Chr2g0100091 RchiOBHm_Chr2g0131211 RchiOBHm_Chr2g0131231 RchiOBHm_Chr2g0155761 RchiOBHm_Chr5g0037341 RchiOBHm_Chr6g0286771 RchiOBHm_Chr7g0179801
rosa_laevigata	RLG00000005323 RLG00000033775
rosa_multiflora	Rmu_co8405049.1_g000002 Rmu_sc0003547.1_g000004 Rmu_sc0004156.1_g000008 Rmu_sc0007546.1_g000012 Rmu_sc0026307.1_g000001 Rmu_sc0032585.1_g000001 Rmu_ssc0000019.1_g000022
rosa_roxburghii	Rroxscaffold_1G00027620 Rroxscaffold_1G00027630 Rroxscaffold_1G00043630 Rroxscaffold_2G00107640 Rroxscaffold_3G00273460 Rroxscaffold_5G00347960 Rroxscaffold_5G00350580 Rroxscaffold_5G00366890 Rroxscaffold_6G00391730 Rroxscaffold_6G00392580 Rroxscaffold_7G00170270 Rroxscaffold_7G00170280
rosa_rugosa	Rorug02G0499800 Rorug04G0099000 Rorug04G0116000 Rorug05G0129300 Rorug05G0164200 Rorug06G0428300 Rorug06G0428400
rosa_samantha	Rh1DG306200 Rh2AG348600 Rh2CG139500 Rh2CG334400 Rh2CG334500 Rh2CG334700 Rh2DG139800 Rh2DG373800 Rh5BG255900 Rh5CG289000 Rh5DG264300 Rh5DG449300 Rh6AG295400 Rh6BG299400 Rh6CG299300 Rh6DG291200 Rh7AG028200 Rh7BG027100 Rh7BG173900 Rh7CG029000 Rh7DG028500
rosa_wichuraiana	Rw5G023500 Rw7G002240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	900
AccB1I	GGYRCC	1 cut(s)	143
AccII	CGCG	4 cut(s)	63, 135, 181, 290
AclWI	GGATC	7 cut(s)	212, 337, 339, 457, 503, 516, 557
AcsI	RAATTY	5 cut(s)	421, 583, 667, 673, 685
AcuI	CTGAAG	1 cut(s)	326
AcvI	CACGTG	1 cut(s)	273
AcyI	GRCGYC	5 cut(s)	66, 144, 171, 189, 897
AfaI	GTAC	3 cut(s)	269, 445, 629
AflIII	ACRYGT	2 cut(s)	264, 270
AgsI	TTSAA	3 cut(s)	667, 673, 773
AjnI	CCWGG	2 cut(s)	327, 375
AjuI	GAANNNNNNNTTGG	1 cut(s)	1024
AluBI	AGCT	6 cut(s)	313, 433, 711, 840, 881, 970
AluI	AGCT	6 cut(s)	313, 433, 711, 840, 881, 970
Alw21I	GWGCWC	1 cut(s)	315
Alw26I	GTCTC	2 cut(s)	377, 405
AlwI	GGATC	7 cut(s)	212, 337, 339, 457, 503, 516, 557
AoxI	GGCC	3 cut(s)	160, 325, 938
ApeKI	GCWGC	2 cut(s)	350, 482
ApoI	RAATTY	5 cut(s)	421, 583, 667, 673, 685
Asp700I	GAANNNNTTC	2 cut(s)	281, 434
AspLEI	GCGC	4 cut(s)	146, 183, 290, 409
AspS9I	GGNCC	2 cut(s)	292, 851
AsuC2I	CCSGG	1 cut(s)	347
AsuHPI	GGTGA	4 cut(s)	538, 553, 592, 794
AsuII	TTCGAA	1 cut(s)	833
AvaII	GGWCC	2 cut(s)	292, 851
BamHI	GGATCC	1 cut(s)	508
BanI	GGYRCC	1 cut(s)	143
BanII	GRGCYC	1 cut(s)	315
BarI	GAAGNNNNNNTAC	4 cut(s)	251, 283, 611, 643
BbrPI	CACGTG	1 cut(s)	273
BbsI	GAAGAC	1 cut(s)	602
Bbv12I	GWGCWC	1 cut(s)	315
BbvCI	CCTCAGC	1 cut(s)	119
BbvI	GCAGC	2 cut(s)	337, 494
BccI	CCATC	2 cut(s)	653, 800
BceAI	ACGGC	3 cut(s)	8, 157, 621
BcgI	CGANNNNNNTGC	2 cut(s)	475, 509
BciT130I	CCWGG	2 cut(s)	329, 377
BciVI	GTATCC	1 cut(s)	604
BcnI	CCSGG	1 cut(s)	347
BcoDI	GTCTC	2 cut(s)	377, 405
BfaI	CTAG	1 cut(s)	882
BfmI	CTRYAG	1 cut(s)	73
BfoI	RGCGCY	2 cut(s)	147, 410
BfuI	GTATCC	1 cut(s)	604
BglII	AGATCT	1 cut(s)	721
BisI	GCNGC	7 cut(s)	18, 21, 61, 174, 199, 351, 483
BlsI	GCNGC	7 cut(s)	19, 22, 62, 175, 200, 352, 484
Bme1390I	CCNGG	3 cut(s)	329, 347, 377
Bme18I	GGWCC	2 cut(s)	292, 851
BmgT120I	GGNCC	2 cut(s)	292, 851
BmiI	GGNNCC	5 cut(s)	145, 294, 510, 681, 873
BmrFI	CCNGG	3 cut(s)	329, 347, 377
BoxI	GACNNNNGTC	1 cut(s)	244
BpiI	GAAGAC	1 cut(s)	602
BpmI	CTGGAG	2 cut(s)	21, 248
Bpu10I	CCTNAGC	2 cut(s)	95, 119
Bpu14I	TTCGAA	1 cut(s)	833
BpuEI	CTTGAG	1 cut(s)	996
BpuMI	CCSGG	1 cut(s)	347
Bsa29I	ATCGAT	1 cut(s)	464
BsaAI	YACGTR	2 cut(s)	267, 273
BsaBI	GATNNNNATC	2 cut(s)	454, 1026
BsaHI	GRCGYC	5 cut(s)	66, 144, 171, 189, 897
BsaI	GGTCTC	1 cut(s)	377
BsaJI	CCNNGG	2 cut(s)	184, 375
BsaWI	WCCGGW	2 cut(s)	446, 862
Bse118I	RCCGGY	1 cut(s)	622
Bse1I	ACTGG	1 cut(s)	844
Bse3DI	GCAATG	1 cut(s)	558
Bse8I	GATNNNNATC	2 cut(s)	454, 1026
BseBI	CCWGG	2 cut(s)	329, 377
BseCI	ATCGAT	1 cut(s)	464
BseDI	CCNNGG	2 cut(s)	184, 375
BseGI	GGATG	3 cut(s)	385, 811, 1002
BseJI	GATNNNNATC	2 cut(s)	454, 1026
BseMI	GCAATG	1 cut(s)	558
BseMII	CTCAG	5 cut(s)	86, 133, 328, 431, 956
BseNI	ACTGG	1 cut(s)	844
BseRI	GAGGAG	4 cut(s)	92, 559, 721, 760
BseXI	GCAGC	2 cut(s)	337, 494
BseYI	CCCAGC	1 cut(s)	912
Bsh1236I	CGCG	4 cut(s)	63, 135, 181, 290
Bsh1285I	CGRYCG	1 cut(s)	31
BshFI	GGCC	3 cut(s)	162, 327, 940
BshNI	GGYRCC	1 cut(s)	143
BshVI	ATCGAT	1 cut(s)	464
BsiEI	CGRYCG	1 cut(s)	31
BsiHKAI	GWGCWC	1 cut(s)	315
BsiSI	CCGG	5 cut(s)	202, 347, 447, 623, 863
BslFI	GGGAC	3 cut(s)	76, 278, 730
BsmAI	GTCTC	2 cut(s)	377, 405
BsmFI	GGGAC	3 cut(s)	76, 278, 730
BsmI	GAATGC	1 cut(s)	736
BsnI	GGCC	3 cut(s)	162, 327, 940
Bso31I	GGTCTC	1 cut(s)	377
Bsp119I	TTCGAA	1 cut(s)	833
Bsp1286I	GDGCHC	1 cut(s)	315
BspANI	GGCC	3 cut(s)	162, 327, 940
BspCNI	CTCAG	5 cut(s)	87, 132, 327, 430, 955
BspDI	ATCGAT	1 cut(s)	464
BspFNI	CGCG	4 cut(s)	63, 135, 181, 290
BspLI	GGNNCC	5 cut(s)	145, 294, 510, 681, 873
BspPI	GGATC	7 cut(s)	212, 337, 339, 457, 503, 516, 557
BspQI	GCTCTTC	1 cut(s)	830
BspT104I	TTCGAA	1 cut(s)	833
BspT107I	GGYRCC	1 cut(s)	143
BspTNI	GGTCTC	1 cut(s)	377
BsrDI	GCAATG	1 cut(s)	558
BsrFI	RCCGGY	1 cut(s)	622
BsrI	ACTGG	1 cut(s)	844
BssAI	RCCGGY	1 cut(s)	622
BssECI	CCNNGG	2 cut(s)	184, 375
BssNI	GRCGYC	5 cut(s)	66, 144, 171, 189, 897
Bst2UI	CCWGG	2 cut(s)	329, 377
Bst6I	CTCTTC	4 cut(s)	649, 698, 758, 830
BstACI	GRCGYC	5 cut(s)	66, 144, 171, 189, 897
BstBAI	YACGTR	2 cut(s)	267, 273
BstBI	TTCGAA	1 cut(s)	833
BstC8I	GCNNGC	3 cut(s)	355, 624, 696
BstDEI	CTNAG	6 cut(s)	95, 119, 314, 417, 699, 942
BstF5I	GGATG	3 cut(s)	385, 811, 1002
BstFNI	CGCG	4 cut(s)	63, 135, 181, 290
BstH2I	RGCGCY	2 cut(s)	147, 410
BstHHI	GCGC	4 cut(s)	146, 183, 290, 409
BstMAI	GTCTC	2 cut(s)	377, 405
BstMCI	CGRYCG	1 cut(s)	31
BstMWI	GCNNNNNNNGC	6 cut(s)	105, 141, 195, 413, 866, 976
BstNI	CCWGG	2 cut(s)	329, 377
BstPAI	GACNNNNGTC	1 cut(s)	244
BstSCI	CCNGG	3 cut(s)	327, 345, 375
BstSFI	CTRYAG	1 cut(s)	73
BstUI	CGCG	4 cut(s)	63, 135, 181, 290
BstV1I	GCAGC	2 cut(s)	337, 494
BstV2I	GAAGAC	1 cut(s)	602
BstX2I	RGATCY	5 cut(s)	204, 331, 508, 549, 721
BstYI	RGATCY	5 cut(s)	204, 331, 508, 549, 721
Bsu15I	ATCGAT	1 cut(s)	464
BsuI	GTATCC	1 cut(s)	604
BsuRI	GGCC	3 cut(s)	162, 327, 940
BsuTUI	ATCGAT	1 cut(s)	464
BtgZI	GCGATG	1 cut(s)	974
BtsCI	GGATG	3 cut(s)	385, 811, 1002
Cac8I	GCNNGC	3 cut(s)	355, 624, 696
CfoI	GCGC	4 cut(s)	146, 183, 290, 409
Cfr10I	RCCGGY	1 cut(s)	622
Cfr13I	GGNCC	2 cut(s)	292, 851
ClaI	ATCGAT	1 cut(s)	464
CseI	GACGC	4 cut(s)	74, 178, 179, 223
Csp6I	GTAC	3 cut(s)	268, 444, 628
CviQI	GTAC	3 cut(s)	268, 444, 628
DdeI	CTNAG	6 cut(s)	95, 119, 314, 417, 699, 942
DinI	GGCGCC	1 cut(s)	145
Eam1104I	CTCTTC	4 cut(s)	649, 698, 758, 830
EarI	CTCTTC	4 cut(s)	649, 698, 758, 830
EciI	GGCGGA	3 cut(s)	4, 185, 623
Ecl136II	GAGCTC	1 cut(s)	313
Eco147I	AGGCCT	1 cut(s)	327
Eco24I	GRGCYC	1 cut(s)	315
Eco31I	GGTCTC	1 cut(s)	377
Eco47I	GGWCC	2 cut(s)	292, 851
Eco53kI	GAGCTC	1 cut(s)	313
Eco57I	CTGAAG	1 cut(s)	326
Eco72I	CACGTG	1 cut(s)	273
EcoICRI	GAGCTC	1 cut(s)	313
EcoRI	GAATTC	2 cut(s)	673, 685
EcoRII	CCWGG	2 cut(s)	327, 375
EcoT38I	GRGCYC	1 cut(s)	315
EgeI	GGCGCC	1 cut(s)	145
EheI	GGCGCC	1 cut(s)	145
FaiI	YATR	3 cut(s)	555, 603, 984
FalI	AAGNNNNNCTT	2 cut(s)	695, 727
FaqI	GGGAC	3 cut(s)	76, 278, 730
FauI	CCCGC	1 cut(s)	65
Fnu4HI	GCNGC	7 cut(s)	18, 21, 61, 174, 199, 351, 483
FokI	GGATG	3 cut(s)	392, 818, 1009
FriOI	GRGCYC	1 cut(s)	315
Fsp4HI	GCNGC	7 cut(s)	18, 21, 61, 174, 199, 351, 483
FspBI	CTAG	1 cut(s)	882
GlaI	GCGC	4 cut(s)	145, 182, 289, 408
GluI	GCNGC	7 cut(s)	18, 21, 61, 174, 199, 351, 483
GsaI	CCCAGC	1 cut(s)	916
GsuI	CTGGAG	2 cut(s)	21, 248
HaeII	RGCGCY	2 cut(s)	147, 410
HaeIII	GGCC	3 cut(s)	162, 327, 940
HapII	CCGG	5 cut(s)	202, 347, 447, 623, 863
HgaI	GACGC	4 cut(s)	74, 178, 179, 223
HhaI	GCGC	4 cut(s)	146, 183, 290, 409
Hin1I	GRCGYC	5 cut(s)	66, 144, 171, 189, 897
Hin6I	GCGC	4 cut(s)	144, 181, 288, 407
HinP1I	GCGC	4 cut(s)	144, 181, 288, 407
HincII	GTYRAC	3 cut(s)	220, 895, 901
HindII	GTYRAC	3 cut(s)	220, 895, 901
HinfI	GANTC	5 cut(s)	337, 455, 461, 598, 1027
HpaII	CCGG	5 cut(s)	202, 347, 447, 623, 863
HphI	GGTGA	4 cut(s)	538, 553, 592, 794
Hpy166II	GTNNAC	5 cut(s)	220, 270, 444, 895, 901
Hpy188III	TCNNGA	5 cut(s)	249, 427, 473, 773, 1044
Hpy8I	GTNNAC	5 cut(s)	220, 270, 444, 895, 901
Hpy99I	CGWCG	9 cut(s)	29, 68, 140, 143, 170, 173, 194, 239, 580
HpyAV	CCTTC	6 cut(s)	271, 301, 317, 817, 880, 958
HpyCH4IV	ACGT	4 cut(s)	222, 266, 272, 897
HpyCH4V	TGCA	2 cut(s)	357, 798
HpyF10VI	GCNNNNNNNGC	6 cut(s)	105, 141, 195, 413, 866, 976
HpyF3I	CTNAG	6 cut(s)	95, 119, 314, 417, 699, 942
HpySE526I	ACGT	4 cut(s)	222, 266, 272, 897
Hsp92I	GRCGYC	5 cut(s)	66, 144, 171, 189, 897
HspAI	GCGC	4 cut(s)	144, 181, 288, 407
KasI	GGCGCC	1 cut(s)	143
KroI	GCCGGC	1 cut(s)	622
KroNI	GCCGGC	1 cut(s)	624
LguI	GCTCTTC	1 cut(s)	830
LmnI	GCTCC	8 cut(s)	113, 310, 679, 691, 708, 747, 865, 967
Lsp1109I	GCAGC	2 cut(s)	337, 494
MaeI	CTAG	1 cut(s)	882
MaeII	ACGT	4 cut(s)	222, 266, 272, 897
MboII	GAAGA	7 cut(s)	271, 332, 607, 666, 715, 775, 847
MflI	RGATCY	5 cut(s)	204, 331, 508, 549, 721
MhlI	GDGCHC	1 cut(s)	315
MluCI	AATT	9 cut(s)	112, 421, 488, 583, 667, 673, 685, 799, 1032
Mly113I	GGCGCC	1 cut(s)	144
MlyI	GAGTC	2 cut(s)	331, 592
MmeI	TCCRAC	1 cut(s)	217
MroNI	GCCGGC	1 cut(s)	622
MroXI	GAANNNNTTC	2 cut(s)	281, 434
MspI	CCGG	5 cut(s)	202, 347, 447, 623, 863
MspR9I	CCNGG	3 cut(s)	329, 347, 377
Mva1269I	GAATGC	1 cut(s)	736
MvaI	CCWGG	2 cut(s)	329, 377
MvnI	CGCG	4 cut(s)	63, 135, 181, 290
MwoI	GCNNNNNNNGC	6 cut(s)	105, 141, 195, 413, 866, 976
NaeI	GCCGGC	1 cut(s)	624
NarI	GGCGCC	1 cut(s)	144
NciI	CCSGG	1 cut(s)	347
NgoMIV	GCCGGC	1 cut(s)	622
NlaIV	GGNNCC	5 cut(s)	145, 294, 510, 681, 873
NmeAIII	GCCGAG	1 cut(s)	165
NspV	TTCGAA	1 cut(s)	833
PceI	AGGCCT	1 cut(s)	327
PciSI	GCTCTTC	1 cut(s)	830
PcsI	WCGNNNNNNNCGW	2 cut(s)	165, 263
PctI	GAATGC	1 cut(s)	736
PdiI	GCCGGC	1 cut(s)	624
PdmI	GAANNNNTTC	2 cut(s)	281, 434
PfeI	GAWTC	3 cut(s)	455, 461, 1027
PflFI	GACNNNGTC	1 cut(s)	215
PkrI	GCNGC	7 cut(s)	19, 22, 62, 175, 200, 352, 484
Ple19I	CGATCG	1 cut(s)	31
PleI	GAGTC	2 cut(s)	331, 592
PluTI	GGCGCC	1 cut(s)	147
PmaCI	CACGTG	1 cut(s)	273
PmlI	CACGTG	1 cut(s)	273
PpsI	GAGTC	2 cut(s)	331, 592
Ppu21I	YACGTR	2 cut(s)	267, 273
PshAI	GACNNNNGTC	1 cut(s)	244
Psp124BI	GAGCTC	1 cut(s)	315
Psp6I	CCWGG	2 cut(s)	327, 375
PspCI	CACGTG	1 cut(s)	273
PspFI	CCCAGC	1 cut(s)	912
PspGI	CCWGG	2 cut(s)	327, 375
PspN4I	GGNNCC	5 cut(s)	145, 294, 510, 681, 873
PspPI	GGNCC	2 cut(s)	292, 851
PsuI	RGATCY	5 cut(s)	204, 331, 508, 549, 721
PsyI	GACNNNGTC	1 cut(s)	215
PvuI	CGATCG	1 cut(s)	31
RsaI	GTAC	3 cut(s)	269, 445, 629
RsaNI	GTAC	3 cut(s)	268, 444, 628
SacI	GAGCTC	1 cut(s)	315
SapI	GCTCTTC	1 cut(s)	830
SatI	GCNGC	7 cut(s)	18, 21, 61, 174, 199, 351, 483
Sau96I	GGNCC	2 cut(s)	292, 851
SchI	GAGTC	2 cut(s)	331, 592
ScrFI	CCNGG	3 cut(s)	329, 347, 377
SduI	GDGCHC	1 cut(s)	315
SfcI	CTRYAG	1 cut(s)	73
SfoI	GGCGCC	1 cut(s)	145
SfuI	TTCGAA	1 cut(s)	833
SinI	GGWCC	2 cut(s)	292, 851
SmlI	CTYRAG	1 cut(s)	1011
SmoI	CTYRAG	1 cut(s)	1011
Sse9I	AATT	9 cut(s)	112, 421, 488, 583, 667, 673, 685, 799, 1032
SseBI	AGGCCT	1 cut(s)	327
SspDI	GGCGCC	1 cut(s)	143
SspMI	CTAG	1 cut(s)	882
SstI	GAGCTC	1 cut(s)	315
StuI	AGGCCT	1 cut(s)	327
StyD4I	CCNGG	3 cut(s)	327, 345, 375
TaiI	ACGT	4 cut(s)	225, 269, 275, 900
TaqI	TCGA	5 cut(s)	27, 165, 257, 464, 833
TasI	AATT	9 cut(s)	112, 421, 488, 583, 667, 673, 685, 799, 1032
TauI	GCSGC	5 cut(s)	20, 23, 63, 176, 201
TfiI	GAWTC	3 cut(s)	455, 461, 1027
TseI	GCWGC	2 cut(s)	350, 482
TspDTI	ATGAA	2 cut(s)	492, 977
Tth111I	GACNNNGTC	1 cut(s)	215
VpaK11BI	GGWCC	2 cut(s)	292, 851
XapI	RAATTY	5 cut(s)	421, 583, 667, 673, 685
XmnI	GAANNNNTTC	2 cut(s)	281, 434
XspI	CTAG	1 cut(s)	882
ZraI	GACGTC	1 cut(s)	898

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.