Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000573

Physical Location & Seq

Genomic Coordinates Reverse (-)

1965945 .. 1969365

Gene Structure 3421 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16029

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGGAGTCCGCCGCTCCTCCACCTCCTCCTCCTCCACCGCCGCCGCCGCCGCAACCGGAGACCGCTTCCAGGCACCACGCCTATAGCCGGAAGCAGAAGTCTCTCGGCCTCTTGTGCTCCAATTTCATTGCCTTGTACGATCGAGAAGGCGTGACCTCCGTCGGCTTGGACGACGCCGCTGCAAGATTAGGCGTGGAGAGGCGACGGATCTACGATATCGTTAATGTGCTTGAGAGCGTTGGGGTTCTTTCGCGAAAGGCAAAGAACCAGTATACTTGGAAAGGGTTTGGGGCAATCCCTATTGCTTTACATCAGCTAAAGGAAGAGGGTCTGAAAGAGAACTTCAATACTTTCCATGGCGATCTCCAGGGCAGTGATGATCCGAAATGTTCGCAGGGTTCAGATGATGAGGAAGGTGATGAGAGTGGTCCTGCAACTGGGAGTCAGAATGAGAACCCCGGTGTCCATCCCAAATCTTCAGGAAACTCGAAAAATGATAATAGAAGGGAAAAGTCTCTGGCACTTCTTACACAGAATTTTGTGAAGCTCTTCGTCTGCTCCACTGTAGAATCCATCTCCCTTGATGAAGCTGCAAGGTTATTACTTGGGGATGCACACAATGCATCTGTAATGAGAACTAAAGTAAGGCGGATTTATGATATTGCAAATGTTTTGTCCTCCATGAATCTTATTGAAAAGACCCACACAGCAGATACAAGGAAGCCGGCATACAAATGGTTGGGATTGAAAGGAAAAGATGTCGTGAGTTCAGCTTCAGACGAGTCTAGAAAAAGAGCCTTTGGAACAGACATCACAAACGTCAGTTGTAAGAGGGGAAAAGTAGAATCTTCTACTGCTGGGAAATTGGAAGCTCAGAAACAAAAGCTACATGAGACTACAGTACGGCAACGTGAGAGACGTGAGAGCACAGTACATAAGGTTGATAGGAACAATTTAGAGGACTCGAAAGAAAATACAAAGAGCTACCAGTTTGGCCCTTTTGCTCCAGTTACTATTGCCAGAGCTGGGAATTTCAACATGAAGAAGGTTGACTGGGACAATTTGTCGTCTACTTACCGTCCCCAGTATCAGAATCAAGCTTTGAAGGAGCTGTTTTCTCATTACATGGAAGCATGGAAGTCATGGTACTCTGAAGTTGTTGAGAAGCCAATCCAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006355 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0019219 GO:0019222 GO:0022402 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032875 GO:0032876 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045786 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051252 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1903506 GO:2000104 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E2F_TDP

Protein Analysis

393

Amino Acids

43.84

Weight (kDa)

9.01

Isoelectric Point (pI)

39.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_E2F_TDP	PF02319	31 - 95	3.8e-22	E2F/DP family winged-helix DNA-binding domain
WHD_E2F_TDP	PF02319	169 - 248	2.7e-19	E2F/DP family winged-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48160 AT3G48160
fragaria_vesca	FvH4_3g21790 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330
malus_domestica	MD06G1181700.v1.1 MD14G1187600.v1.1
prunus_persica	Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1
pyrus_communis	pycom06g16070 pycom14g15550
rosa_chinensis	RchiOBHm_Chr2g0100091 RchiOBHm_Chr2g0131211 RchiOBHm_Chr2g0131231 RchiOBHm_Chr2g0155761 RchiOBHm_Chr5g0037341 RchiOBHm_Chr6g0286771 RchiOBHm_Chr7g0179801
rosa_laevigata	RLG00000005323 RLG00000033775
rosa_multiflora	Rmu_co8405049.1_g000002 Rmu_sc0003547.1_g000004 Rmu_sc0004156.1_g000008 Rmu_sc0007546.1_g000012 Rmu_sc0026307.1_g000001 Rmu_sc0032585.1_g000001 Rmu_ssc0000019.1_g000022
rosa_roxburghii	Rroxscaffold_1G00027620 Rroxscaffold_1G00027630 Rroxscaffold_1G00043630 Rroxscaffold_2G00107640 Rroxscaffold_3G00273460 Rroxscaffold_5G00347960 Rroxscaffold_5G00350580 Rroxscaffold_5G00366890 Rroxscaffold_6G00391730 Rroxscaffold_6G00392580 Rroxscaffold_7G00170270 Rroxscaffold_7G00170280
rosa_rugosa	Rorug02G0499800 Rorug04G0099000 Rorug04G0116000 Rorug05G0129300 Rorug05G0164200 Rorug06G0428300 Rorug06G0428400
rosa_samantha	Rh1DG306200 Rh2AG348600 Rh2CG139500 Rh2CG334400 Rh2CG334500 Rh2CG334700 Rh2DG139800 Rh2DG373800 Rh5BG255900 Rh5CG289000 Rh5DG264300 Rh5DG449300 Rh6AG295400 Rh6BG299400 Rh6CG299300 Rh6DG291200 Rh7AG028200 Rh7BG027100 Rh7BG173900 Rh7CG029000 Rh7DG028500
rosa_wichuraiana	Rw5G023500 Rw7G002240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	72
AccBSI	CCGCTC	1 cut(s)	14
AccI	GTMKAC	2 cut(s)	272, 1070
AccII	CGCG	1 cut(s)	253
AclWI	GGATC	2 cut(s)	215, 374
AcsI	RAATTY	2 cut(s)	535, 1030
AcuI	CTGAAG	3 cut(s)	462, 759, 1173
AcyI	GRCGYC	1 cut(s)	174
AfaI	GTAC	4 cut(s)	137, 903, 933, 1148
AfiI	CCNNNNNNNGG	4 cut(s)	69, 87, 437, 1026
AgsI	TTSAA	5 cut(s)	346, 695, 748, 1036, 1105
AhdI	GACNNNNNGTC	1 cut(s)	1063
AjiI	CACGTC	1 cut(s)	920
AjnI	CCWGG	2 cut(s)	68, 366
Alw21I	GWGCWC	2 cut(s)	119, 929
Alw26I	GTCTC	5 cut(s)	53, 105, 519, 887, 910
AlwI	GGATC	2 cut(s)	215, 374
AoxI	GGCC	2 cut(s)	106, 994
ApeKI	GCWGC	2 cut(s)	179, 590
ApoI	RAATTY	2 cut(s)	535, 1030
ArsI	GACNNNNNNTTYG	2 cut(s)	659, 691
Asp700I	GAANNNNTTC	1 cut(s)	548
AspS9I	GGNCC	2 cut(s)	428, 995
AsuC2I	CCSGG	1 cut(s)	459
AsuHPI	GGTGA	1 cut(s)	428
AvaII	GGWCC	1 cut(s)	428
BanI	GGYRCC	1 cut(s)	72
BarI	GAAGNNNNNNTAC	4 cut(s)	713, 745, 1130, 1162
Bbv12I	GWGCWC	2 cut(s)	119, 929
BbvI	GCAGC	2 cut(s)	166, 577
BccI	CCATC	2 cut(s)	474, 581
BceAI	ACGGC	1 cut(s)	920
BcgI	CGANNNNNNTGC	2 cut(s)	161, 195
BciT130I	CCWGG	2 cut(s)	70, 368
BcnI	CCSGG	1 cut(s)	459
BcoDI	GTCTC	5 cut(s)	53, 105, 519, 887, 910
BfaI	CTAG	1 cut(s)	786
BfmI	CTRYAG	3 cut(s)	82, 564, 897
BisI	GCNGC	8 cut(s)	12, 41, 44, 47, 50, 177, 180, 591
BlsI	GCNGC	8 cut(s)	13, 42, 45, 48, 51, 178, 181, 592
Bme1390I	CCNGG	3 cut(s)	70, 368, 459
Bme18I	GGWCC	1 cut(s)	428
BmeRI	GACNNNNNGTC	1 cut(s)	1063
BmgBI	CACGTC	1 cut(s)	920
BmgT120I	GGNCC	2 cut(s)	428, 995
BmiI	GGNNCC	1 cut(s)	74
BmrFI	CCNGG	3 cut(s)	70, 368, 459
BmrI	ACTGGG	3 cut(s)	447, 1063, 1078
BmsI	GCATC	2 cut(s)	601, 632
BmuI	ACTGGG	3 cut(s)	447, 1063, 1078
BoxI	GACNNNNGTC	1 cut(s)	158
BpmI	CTGGAG	2 cut(s)	350, 990
BpuEI	CTTGAG	1 cut(s)	251
BpuMI	CCSGG	1 cut(s)	459
BsaHI	GRCGYC	1 cut(s)	174
BsaI	GGTCTC	1 cut(s)	53
BsaJI	CCNNGG	3 cut(s)	355, 367, 457
BsaWI	WCCGGW	1 cut(s)	55
Bsc4I	CCNNNNNNNGG	4 cut(s)	69, 87, 437, 1026
Bse118I	RCCGGY	1 cut(s)	724
Bse1I	ACTGG	6 cut(s)	268, 442, 988, 1007, 1058, 1084
Bse3DI	GCAATG	1 cut(s)	126
BseBI	CCWGG	2 cut(s)	70, 368
BseDI	CCNNGG	3 cut(s)	355, 367, 457
BseGI	GGATG	2 cut(s)	466, 616
BseLI	CCNNNNNNNGG	4 cut(s)	69, 87, 437, 1026
BseMI	GCAATG	1 cut(s)	126
BseMII	CTCAG	1 cut(s)	887
BseNI	ACTGG	6 cut(s)	268, 442, 988, 1007, 1058, 1084
BseRI	GAGGAG	4 cut(s)	6, 15, 18, 21
BseXI	GCAGC	2 cut(s)	166, 577
BseYI	CCCAGC	2 cut(s)	857, 1025
Bsh1236I	CGCG	1 cut(s)	253
Bsh1285I	CGRYCG	1 cut(s)	142
BshFI	GGCC	2 cut(s)	108, 996
BshNI	GGYRCC	1 cut(s)	72
BsiEI	CGRYCG	1 cut(s)	142
BsiHKAI	GWGCWC	2 cut(s)	119, 929
BsiSI	CCGG	4 cut(s)	56, 88, 459, 725
BslFI	GGGAC	2 cut(s)	1065, 1070
BslI	CCNNNNNNNGG	4 cut(s)	69, 87, 437, 1026
BsmAI	GTCTC	5 cut(s)	53, 105, 519, 887, 910
BsmBI	CGTCTC	1 cut(s)	910
BsmFI	GGGAC	2 cut(s)	1065, 1070
BsnI	GGCC	2 cut(s)	108, 996
Bso31I	GGTCTC	1 cut(s)	53
Bsp1286I	GDGCHC	2 cut(s)	119, 929
Bsp143I	GATC	4 cut(s)	139, 207, 361, 379
Bsp19I	CCATGG	1 cut(s)	355
Bsp68I	TCGCGA	1 cut(s)	253
BspANI	GGCC	2 cut(s)	108, 996
BspCNI	CTCAG	1 cut(s)	886
BspFNI	CGCG	1 cut(s)	253
BspLI	GGNNCC	1 cut(s)	74
BspPI	GGATC	2 cut(s)	215, 374
BspQI	GCTCTTC	1 cut(s)	554
BspT107I	GGYRCC	1 cut(s)	72
BspTNI	GGTCTC	1 cut(s)	53
BsrBI	CCGCTC	1 cut(s)	14
BsrDI	GCAATG	1 cut(s)	126
BsrFI	RCCGGY	1 cut(s)	724
BsrI	ACTGG	6 cut(s)	268, 442, 988, 1007, 1058, 1084
BssAI	RCCGGY	1 cut(s)	724
BssECI	CCNNGG	3 cut(s)	355, 367, 457
BssMI	GATC	4 cut(s)	139, 207, 361, 379
BssNAI	GTATAC	1 cut(s)	273
BssNI	GRCGYC	1 cut(s)	174
BssT1I	CCWWGG	1 cut(s)	355
Bst1107I	GTATAC	1 cut(s)	273
Bst2UI	CCWGG	2 cut(s)	70, 368
Bst4CI	ACNGT	4 cut(s)	565, 901, 931, 1079
Bst6I	CTCTTC	2 cut(s)	318, 554
BstACI	GRCGYC	1 cut(s)	174
BstAPI	GCANNNNNTGC	1 cut(s)	620
BstC8I	GCNNGC	1 cut(s)	726
BstDEI	CTNAG	1 cut(s)	873
BstDSI	CCRYGG	1 cut(s)	355
BstF5I	GGATG	2 cut(s)	466, 616
BstFNI	CGCG	1 cut(s)	253
BstKTI	GATC	4 cut(s)	142, 210, 364, 382
BstMAI	GTCTC	5 cut(s)	53, 105, 519, 887, 910
BstMBI	GATC	4 cut(s)	139, 207, 361, 379
BstMCI	CGRYCG	1 cut(s)	142
BstMWI	GCNNNNNNNGC	4 cut(s)	46, 49, 114, 620
BstNI	CCWGG	2 cut(s)	70, 368
BstPAI	GACNNNNGTC	1 cut(s)	158
BstSCI	CCNGG	3 cut(s)	68, 366, 457
BstSFI	CTRYAG	3 cut(s)	82, 564, 897
BstUI	CGCG	1 cut(s)	253
BstV1I	GCAGC	2 cut(s)	166, 577
BstX2I	RGATCY	1 cut(s)	207
BstYI	RGATCY	1 cut(s)	207
BstZ17I	GTATAC	1 cut(s)	273
BsuRI	GGCC	2 cut(s)	108, 996
BtgI	CCRYGG	1 cut(s)	355
BtrI	CACGTC	1 cut(s)	920
BtsCI	GGATG	2 cut(s)	466, 616
BtsI	GCAGTG	1 cut(s)	379
BtsIMutI	CAGTG	2 cut(s)	379, 561
BtuMI	TCGCGA	1 cut(s)	253
Cac8I	GCNNGC	1 cut(s)	726
Cfr10I	RCCGGY	1 cut(s)	724
Cfr13I	GGNCC	2 cut(s)	428, 995
CseI	GACGC	1 cut(s)	182
Csp6I	GTAC	4 cut(s)	136, 902, 932, 1147
CviAII	CATG	7 cut(s)	356, 682, 890, 1039, 1126, 1134, 1143
CviQI	GTAC	4 cut(s)	136, 902, 932, 1147
DdeI	CTNAG	1 cut(s)	873
DpnI	GATC	4 cut(s)	141, 209, 363, 381
DpnII	GATC	4 cut(s)	139, 207, 361, 379
DriI	GACNNNNNGTC	1 cut(s)	1063
Eam1104I	CTCTTC	2 cut(s)	318, 554
Eam1105I	GACNNNNNGTC	1 cut(s)	1063
EarI	CTCTTC	2 cut(s)	318, 554
EciI	GGCGGA	1 cut(s)	664
Eco130I	CCWWGG	1 cut(s)	355
Eco31I	GGTCTC	1 cut(s)	53
Eco32I	GATATC	1 cut(s)	217
Eco47I	GGWCC	1 cut(s)	428
Eco57I	CTGAAG	3 cut(s)	462, 759, 1173
EcoRII	CCWGG	2 cut(s)	68, 366
EcoRV	GATATC	1 cut(s)	217
EcoT14I	CCWWGG	1 cut(s)	355
EcoT22I	ATGCAT	1 cut(s)	625
ErhI	CCWWGG	1 cut(s)	355
Esp3I	CGTCTC	1 cut(s)	910
FaeI	CATG	7 cut(s)	359, 685, 893, 1042, 1129, 1137, 1146
FaqI	GGGAC	2 cut(s)	1065, 1070
FatI	CATG	7 cut(s)	355, 681, 889, 1038, 1125, 1133, 1142
FblI	GTMKAC	2 cut(s)	272, 1070
Fnu4HI	GCNGC	8 cut(s)	12, 41, 44, 47, 50, 177, 180, 591
FokI	GGATG	2 cut(s)	453, 623
Fsp4HI	GCNGC	8 cut(s)	12, 41, 44, 47, 50, 177, 180, 591
FspBI	CTAG	1 cut(s)	786
GluI	GCNGC	8 cut(s)	12, 41, 44, 47, 50, 177, 180, 591
GsaI	CCCAGC	2 cut(s)	861, 1029
GsuI	CTGGAG	2 cut(s)	350, 990
HaeIII	GGCC	2 cut(s)	108, 996
HapII	CCGG	4 cut(s)	56, 88, 459, 725
HgaI	GACGC	1 cut(s)	182
Hin1I	GRCGYC	1 cut(s)	174
Hin1II	CATG	7 cut(s)	359, 685, 893, 1042, 1129, 1137, 1146
HincII	GTYRAC	1 cut(s)	1051
HindII	GTYRAC	1 cut(s)	1051
HindIII	AAGCTT	1 cut(s)	1098
HinfI	GANTC	8 cut(s)	5, 442, 569, 685, 782, 845, 962, 1093
HpaII	CCGG	4 cut(s)	56, 88, 459, 725
HphI	GGTGA	1 cut(s)	428
Hpy166II	GTNNAC	3 cut(s)	273, 1051, 1071
Hpy188I	TCNGA	8 cut(s)	333, 384, 403, 447, 778, 876, 1092, 1153
Hpy188III	TCNNGA	5 cut(s)	143, 252, 480, 763, 786
Hpy8I	GTNNAC	3 cut(s)	273, 1051, 1071
Hpy99I	CGWCG	3 cut(s)	164, 176, 207
HpyAV	CCTTC	5 cut(s)	140, 407, 498, 1039, 1099
HpyCH4III	ACNGT	4 cut(s)	565, 901, 931, 1079
HpyCH4IV	ACGT	3 cut(s)	819, 910, 919
HpyCH4V	TGCA	6 cut(s)	182, 434, 593, 614, 623, 665
HpyF10VI	GCNNNNNNNGC	4 cut(s)	46, 49, 114, 620
HpyF3I	CTNAG	1 cut(s)	873
HpySE526I	ACGT	3 cut(s)	819, 910, 919
Hsp92I	GRCGYC	1 cut(s)	174
Hsp92II	CATG	7 cut(s)	359, 685, 893, 1042, 1129, 1137, 1146
KroI	GCCGGC	1 cut(s)	724
KroNI	GCCGGC	1 cut(s)	726
Kzo9I	GATC	4 cut(s)	139, 207, 361, 379
LguI	GCTCTTC	1 cut(s)	554
LmnI	GCTCC	5 cut(s)	19, 122, 563, 1009, 1108
Lsp1109I	GCAGC	2 cut(s)	166, 577
LweI	GCATC	2 cut(s)	601, 632
MaeI	CTAG	1 cut(s)	786
MaeII	ACGT	3 cut(s)	819, 910, 919
MaeIII	GTNAC	2 cut(s)	151, 1009
MalI	GATC	4 cut(s)	141, 209, 363, 381
MbiI	CCGCTC	1 cut(s)	14
MboI	GATC	4 cut(s)	139, 207, 361, 379
MboII	GAAGA	5 cut(s)	335, 468, 541, 840, 1054
MflI	RGATCY	1 cut(s)	207
MhlI	GDGCHC	2 cut(s)	119, 929
MluCI	AATT	6 cut(s)	121, 535, 863, 952, 1030, 1060
MlyI	GAGTC	4 cut(s)	14, 451, 791, 956
Mph1103I	ATGCAT	1 cut(s)	625
MroNI	GCCGGC	1 cut(s)	724
MroXI	GAANNNNTTC	1 cut(s)	548
MseI	TTAA	1 cut(s)	222
MslI	CAYNNNNRTG	1 cut(s)	733
MspA1I	CMGCKG	1 cut(s)	179
MspI	CCGG	4 cut(s)	56, 88, 459, 725
MspR9I	CCNGG	3 cut(s)	70, 368, 459
MvaI	CCWGG	2 cut(s)	70, 368
MvnI	CGCG	1 cut(s)	253
MwoI	GCNNNNNNNGC	4 cut(s)	46, 49, 114, 620
NaeI	GCCGGC	1 cut(s)	726
NciI	CCSGG	1 cut(s)	459
NcoI	CCATGG	1 cut(s)	355
NdeII	GATC	4 cut(s)	139, 207, 361, 379
NgoMIV	GCCGGC	1 cut(s)	724
NlaIII	CATG	7 cut(s)	359, 685, 893, 1042, 1129, 1137, 1146
NlaIV	GGNNCC	1 cut(s)	74
NmeAIII	GCCGAG	1 cut(s)	84
NmuCI	GTSAC	1 cut(s)	151
NruI	TCGCGA	1 cut(s)	253
NsiI	ATGCAT	1 cut(s)	625
PciSI	GCTCTTC	1 cut(s)	554
PcsI	WCGNNNNNNNCGW	2 cut(s)	168, 916
PdiI	GCCGGC	1 cut(s)	726
PdmI	GAANNNNTTC	1 cut(s)	548
PfeI	GAWTC	4 cut(s)	569, 685, 845, 1093
PkrI	GCNGC	8 cut(s)	13, 42, 45, 48, 51, 178, 181, 592
Ple19I	CGATCG	1 cut(s)	142
PleI	GAGTC	4 cut(s)	13, 450, 790, 956
PpsI	GAGTC	4 cut(s)	13, 450, 790, 956
PshAI	GACNNNNGTC	1 cut(s)	158
Psp6I	CCWGG	2 cut(s)	68, 366
PspFI	CCCAGC	2 cut(s)	857, 1025
PspGI	CCWGG	2 cut(s)	68, 366
PspN4I	GGNNCC	1 cut(s)	74
PspPI	GGNCC	2 cut(s)	428, 995
PsuI	RGATCY	1 cut(s)	207
PvuI	CGATCG	1 cut(s)	142
RruI	TCGCGA	1 cut(s)	253
RsaI	GTAC	4 cut(s)	137, 903, 933, 1148
RsaNI	GTAC	4 cut(s)	136, 902, 932, 1147
RseI	CAYNNNNRTG	1 cut(s)	733
SapI	GCTCTTC	1 cut(s)	554
SaqAI	TTAA	1 cut(s)	222
SatI	GCNGC	8 cut(s)	12, 41, 44, 47, 50, 177, 180, 591
Sau3AI	GATC	4 cut(s)	139, 207, 361, 379
Sau96I	GGNCC	2 cut(s)	428, 995
SchI	GAGTC	4 cut(s)	14, 451, 791, 956
ScrFI	CCNGG	3 cut(s)	70, 368, 459
SduI	GDGCHC	2 cut(s)	119, 929
SfaNI	GCATC	2 cut(s)	601, 632
SfcI	CTRYAG	3 cut(s)	82, 564, 897
SinI	GGWCC	1 cut(s)	428
SmiMI	CAYNNNNRTG	1 cut(s)	733
SmlI	CTYRAG	1 cut(s)	230
SmoI	CTYRAG	1 cut(s)	230
Sse9I	AATT	6 cut(s)	121, 535, 863, 952, 1030, 1060
SspMI	CTAG	1 cut(s)	786
StyD4I	CCNGG	3 cut(s)	68, 366, 457
StyI	CCWWGG	1 cut(s)	355
TaaI	ACNGT	4 cut(s)	565, 901, 931, 1079
TaiI	ACGT	3 cut(s)	822, 913, 922
TaqI	TCGA	3 cut(s)	142, 488, 965
TasI	AATT	6 cut(s)	121, 535, 863, 952, 1030, 1060
TatI	WGTACW	1 cut(s)	931
TauI	GCSGC	6 cut(s)	14, 43, 46, 49, 52, 179
TfiI	GAWTC	4 cut(s)	569, 685, 845, 1093
Tru1I	TTAA	1 cut(s)	222
Tru9I	TTAA	1 cut(s)	222
TscAI	CASTG	2 cut(s)	379, 568
TseFI	GTSAC	1 cut(s)	151
TseI	GCWGC	2 cut(s)	179, 590
Tsp45I	GTSAC	1 cut(s)	151
TspDTI	ATGAA	4 cut(s)	115, 600, 698, 1055
TspGWI	ACGGA	2 cut(s)	148, 220
TspRI	CASTG	2 cut(s)	379, 568
VpaK11BI	GGWCC	1 cut(s)	428
XapI	RAATTY	2 cut(s)	535, 1030
XbaI	TCTAGA	1 cut(s)	785
XmiI	GTMKAC	2 cut(s)	272, 1070
XmnI	GAANNNNTTC	1 cut(s)	548
XspI	CTAG	1 cut(s)	786
Zsp2I	ATGCAT	1 cut(s)	625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.