Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0000573

Physical Location & Seq

Genomic Coordinates Reverse (-)

2079240 .. 2082385

Gene Structure 3146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG029000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGGAGTCCGCCGCTCCTCCACCTCCTCCTCCTCCGCCGCCGCCGCCGCAACCGGAGACCGCTTCCAGGCACCACGCCTATAGCCGGAAGCAGAAGTCTCTCGGCCTCTTGTGCTCCAATTTCATTGCCTTGTACGATCGAGAAGGCGTGACCTCCGTCGGCTTGGACGACGCCGCTGCAAGATTAGGTGTGGAGAGGCGACGGATCTATGATATCGTTAATGTGCTTGAGAGCGTTGGGGTTCTTTCGCGAAAGGCAAAGAACCAGTATACTTGGAAAGGGTTTGGGGCAATCCCTATTGCTTTACAGGAGCTAAAGGAAGAGGGTCTGAAAGAGAACTTCAATACTTTCCATGGCAATCTCCAGGTCAATGATGATCCTAAATGTTCGCAGGGTTCAGATGATGAGGAAGGTGATGAGAGTGGTCCTGCAACTGGGAGTCAGAATGAGAACCCCGGTGTCCATCCCAAATCTTCAGGAAACTCGAAAAATGATAATAGAAGGGAAAAGTCTCTGGCACTACTTACACAGAATTTTGTGAAGCTCTTCGTCTGCTCCACTGTAGAATCCATCTCCCTTGATGAAGCTGCAAGGTTATTACTTGGGGATGCGCACAATGCATCTGTAATGAGAACAGCTAAAGTAAGGCGGATTTATGATATTGCAAATGTTTTGTCCTCCATGAATCTTATTGAAAAGACCCACACAGCAGATACAAGGAAGCCTGCATATAAATGGTTGGGATTAAGAGGAAAAGATGCTGCAAGTTCAGCTTCAGACGAGTCTAGAAAAAGAGCCTTTGGAACAGACATCACAAATGTCAGTTGTAAGAGGGGCAAAGTAGAATCTTCTACTGCTGGGAAATTGGAAGCTCAGAAACAAAAGCAACATGAGAGTACAGTACGGCAACGTGAGAGCATAGTACGTAAGGTTGATAGGAACAATTTAGAGGAGTCGAAAGAAAATACAAAGAGCTACCAGTTTGGCCCTTTTGCTCCAGTTACTATTGCCAGAGCTGGGAATTTCAACATGAAGAAAGTTGACTGGGACAATTTGTCGTCTACTTACCGTCCCCAGTATCAGAATCAAGCTTTGAAGGAGCTGTTTTCTCATTACATGGAAGCATGGAAGTCATGGTACTCTGAAGTTGTTGAGAAGCCAATCCAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006355 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0019219 GO:0019222 GO:0022402 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032875 GO:0032876 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045786 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051252 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1903506 GO:2000104 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E2F_TDP

Protein Analysis

390

Amino Acids

43.45

Weight (kDa)

9.02

Isoelectric Point (pI)

39.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_E2F_TDP	PF02319	30 - 94	3.7e-22	E2F/DP family winged-helix DNA-binding domain
WHD_E2F_TDP	PF02319	168 - 248	8.5e-19	E2F/DP family winged-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48160 AT3G48160
fragaria_vesca	FvH4_3g21790 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330 FvH4_5g16330
malus_domestica	MD06G1181700.v1.1 MD14G1187600.v1.1
prunus_persica	Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1 Prupe.5G180000_v2.0.a1
pyrus_communis	pycom06g16070 pycom14g15550
rosa_chinensis	RchiOBHm_Chr2g0100091 RchiOBHm_Chr2g0131211 RchiOBHm_Chr2g0131231 RchiOBHm_Chr2g0155761 RchiOBHm_Chr5g0037341 RchiOBHm_Chr6g0286771 RchiOBHm_Chr7g0179801
rosa_laevigata	RLG00000005323 RLG00000033775
rosa_multiflora	Rmu_co8405049.1_g000002 Rmu_sc0003547.1_g000004 Rmu_sc0004156.1_g000008 Rmu_sc0007546.1_g000012 Rmu_sc0026307.1_g000001 Rmu_sc0032585.1_g000001 Rmu_ssc0000019.1_g000022
rosa_roxburghii	Rroxscaffold_1G00027620 Rroxscaffold_1G00027630 Rroxscaffold_1G00043630 Rroxscaffold_2G00107640 Rroxscaffold_3G00273460 Rroxscaffold_5G00347960 Rroxscaffold_5G00350580 Rroxscaffold_5G00366890 Rroxscaffold_6G00391730 Rroxscaffold_6G00392580 Rroxscaffold_7G00170270 Rroxscaffold_7G00170280
rosa_rugosa	Rorug02G0499800 Rorug04G0099000 Rorug04G0116000 Rorug05G0129300 Rorug05G0164200 Rorug06G0428300 Rorug06G0428400
rosa_samantha	Rh1DG306200 Rh2AG348600 Rh2CG139500 Rh2CG334400 Rh2CG334500 Rh2CG334700 Rh2DG139800 Rh2DG373800 Rh5BG255900 Rh5CG289000 Rh5DG264300 Rh5DG449300 Rh6AG295400 Rh6BG299400 Rh6CG299300 Rh6DG291200 Rh7AG028200 Rh7BG027100 Rh7BG173900 Rh7CG029000 Rh7DG028500
rosa_wichuraiana	Rw5G023500 Rw7G002240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	612
AccB1I	GGYRCC	1 cut(s)	69
AccBSI	CCGCTC	1 cut(s)	14
AccI	GTMKAC	2 cut(s)	269, 1061
AccII	CGCG	1 cut(s)	250
AclWI	GGATC	2 cut(s)	212, 371
AcsI	RAATTY	2 cut(s)	532, 1021
AcuI	CTGAAG	3 cut(s)	459, 759, 1164
AcyI	GRCGYC	1 cut(s)	171
AfaI	GTAC	5 cut(s)	134, 898, 903, 924, 1139
AfiI	CCNNNNNNNGG	4 cut(s)	66, 84, 434, 1017
AgsI	TTSAA	4 cut(s)	343, 695, 1027, 1096
AhdI	GACNNNNNGTC	1 cut(s)	1054
AjnI	CCWGG	2 cut(s)	65, 363
Alw21I	GWGCWC	1 cut(s)	116
Alw26I	GTCTC	3 cut(s)	50, 102, 516
AlwI	GGATC	2 cut(s)	212, 371
AoxI	GGCC	2 cut(s)	103, 985
ApeKI	GCWGC	3 cut(s)	176, 587, 761
ApoI	RAATTY	2 cut(s)	532, 1021
ArsI	GACNNNNNNTTYG	2 cut(s)	659, 691
Asp700I	GAANNNNTTC	1 cut(s)	545
AspLEI	GCGC	1 cut(s)	613
AspS9I	GGNCC	2 cut(s)	425, 986
AsuC2I	CCSGG	1 cut(s)	456
AsuHPI	GGTGA	1 cut(s)	425
AvaII	GGWCC	1 cut(s)	425
BanI	GGYRCC	1 cut(s)	69
BarI	GAAGNNNNNNTAC	2 cut(s)	1121, 1153
Bbv12I	GWGCWC	1 cut(s)	116
BbvI	GCAGC	3 cut(s)	163, 574, 748
BccI	CCATC	2 cut(s)	471, 578
BceAI	ACGGC	1 cut(s)	920
BcgI	CGANNNNNNTGC	2 cut(s)	158, 192
BciT130I	CCWGG	2 cut(s)	67, 365
BcnI	CCSGG	1 cut(s)	456
BcoDI	GTCTC	3 cut(s)	50, 102, 516
BfaI	CTAG	1 cut(s)	786
BfmI	CTRYAG	2 cut(s)	79, 561
BisI	GCNGC	9 cut(s)	12, 38, 41, 44, 47, 174, 177, 588, 762
BlsI	GCNGC	9 cut(s)	13, 39, 42, 45, 48, 175, 178, 589, 763
Bme1390I	CCNGG	3 cut(s)	67, 365, 456
Bme18I	GGWCC	1 cut(s)	425
BmeRI	GACNNNNNGTC	1 cut(s)	1054
BmgT120I	GGNCC	2 cut(s)	425, 986
BmiI	GGNNCC	1 cut(s)	71
BmrFI	CCNGG	3 cut(s)	67, 365, 456
BmrI	ACTGGG	3 cut(s)	444, 1054, 1069
BmsI	GCATC	3 cut(s)	598, 629, 748
BmuI	ACTGGG	3 cut(s)	444, 1054, 1069
BoxI	GACNNNNGTC	1 cut(s)	155
BpmI	CTGGAG	2 cut(s)	347, 981
BpuEI	CTTGAG	1 cut(s)	248
BpuMI	CCSGG	1 cut(s)	456
BsaAI	YACGTR	1 cut(s)	926
BsaHI	GRCGYC	1 cut(s)	171
BsaI	GGTCTC	1 cut(s)	50
BsaJI	CCNNGG	2 cut(s)	352, 454
BsaWI	WCCGGW	1 cut(s)	52
Bsc4I	CCNNNNNNNGG	4 cut(s)	66, 84, 434, 1017
Bse1I	ACTGG	6 cut(s)	265, 439, 979, 998, 1049, 1075
Bse3DI	GCAATG	1 cut(s)	123
BseBI	CCWGG	2 cut(s)	67, 365
BseDI	CCNNGG	2 cut(s)	352, 454
BseGI	GGATG	2 cut(s)	463, 613
BseLI	CCNNNNNNNGG	4 cut(s)	66, 84, 434, 1017
BseMI	GCAATG	1 cut(s)	123
BseMII	CTCAG	1 cut(s)	887
BseNI	ACTGG	6 cut(s)	265, 439, 979, 998, 1049, 1075
BseRI	GAGGAG	5 cut(s)	6, 15, 18, 21, 965
BseXI	GCAGC	3 cut(s)	163, 574, 748
BseYI	CCCAGC	2 cut(s)	857, 1016
Bsh1236I	CGCG	1 cut(s)	250
Bsh1285I	CGRYCG	1 cut(s)	139
BshFI	GGCC	2 cut(s)	105, 987
BshNI	GGYRCC	1 cut(s)	69
BsiEI	CGRYCG	1 cut(s)	139
BsiHKAI	GWGCWC	1 cut(s)	116
BsiSI	CCGG	3 cut(s)	53, 85, 456
BslFI	GGGAC	2 cut(s)	1056, 1061
BslI	CCNNNNNNNGG	4 cut(s)	66, 84, 434, 1017
BsmAI	GTCTC	3 cut(s)	50, 102, 516
BsmFI	GGGAC	2 cut(s)	1056, 1061
BsnI	GGCC	2 cut(s)	105, 987
Bso31I	GGTCTC	1 cut(s)	50
Bsp1286I	GDGCHC	1 cut(s)	116
Bsp143I	GATC	3 cut(s)	136, 204, 376
Bsp19I	CCATGG	1 cut(s)	352
Bsp68I	TCGCGA	1 cut(s)	250
BspANI	GGCC	2 cut(s)	105, 987
BspCNI	CTCAG	1 cut(s)	886
BspFNI	CGCG	1 cut(s)	250
BspLI	GGNNCC	1 cut(s)	71
BspPI	GGATC	2 cut(s)	212, 371
BspQI	GCTCTTC	1 cut(s)	551
BspT107I	GGYRCC	1 cut(s)	69
BspTNI	GGTCTC	1 cut(s)	50
BsrBI	CCGCTC	1 cut(s)	14
BsrDI	GCAATG	1 cut(s)	123
BsrI	ACTGG	6 cut(s)	265, 439, 979, 998, 1049, 1075
BssECI	CCNNGG	2 cut(s)	352, 454
BssMI	GATC	3 cut(s)	136, 204, 376
BssNAI	GTATAC	1 cut(s)	270
BssNI	GRCGYC	1 cut(s)	171
BssT1I	CCWWGG	1 cut(s)	352
Bst1107I	GTATAC	1 cut(s)	270
Bst2UI	CCWGG	2 cut(s)	67, 365
Bst4CI	ACNGT	3 cut(s)	562, 901, 1070
Bst6I	CTCTTC	2 cut(s)	315, 551
BstACI	GRCGYC	1 cut(s)	171
BstBAI	YACGTR	1 cut(s)	926
BstC8I	GCNNGC	1 cut(s)	726
BstDEI	CTNAG	1 cut(s)	873
BstDSI	CCRYGG	1 cut(s)	352
BstF5I	GGATG	2 cut(s)	463, 613
BstFNI	CGCG	1 cut(s)	250
BstHHI	GCGC	1 cut(s)	613
BstKTI	GATC	3 cut(s)	139, 207, 379
BstMAI	GTCTC	3 cut(s)	50, 102, 516
BstMBI	GATC	3 cut(s)	136, 204, 376
BstMCI	CGRYCG	1 cut(s)	139
BstMWI	GCNNNNNNNGC	5 cut(s)	43, 46, 111, 617, 770
BstNI	CCWGG	2 cut(s)	67, 365
BstPAI	GACNNNNGTC	1 cut(s)	155
BstSCI	CCNGG	3 cut(s)	65, 363, 454
BstSFI	CTRYAG	2 cut(s)	79, 561
BstSNI	TACGTA	1 cut(s)	926
BstUI	CGCG	1 cut(s)	250
BstV1I	GCAGC	3 cut(s)	163, 574, 748
BstX2I	RGATCY	1 cut(s)	204
BstYI	RGATCY	1 cut(s)	204
BstZ17I	GTATAC	1 cut(s)	270
BsuRI	GGCC	2 cut(s)	105, 987
BtgI	CCRYGG	1 cut(s)	352
BtsCI	GGATG	2 cut(s)	463, 613
BtsIMutI	CAGTG	1 cut(s)	558
BtuMI	TCGCGA	1 cut(s)	250
Cac8I	GCNNGC	1 cut(s)	726
CfoI	GCGC	1 cut(s)	613
Cfr13I	GGNCC	2 cut(s)	425, 986
CseI	GACGC	1 cut(s)	179
Csp6I	GTAC	5 cut(s)	133, 897, 902, 923, 1138
CviAII	CATG	7 cut(s)	353, 682, 890, 1030, 1117, 1125, 1134
CviQI	GTAC	5 cut(s)	133, 897, 902, 923, 1138
DdeI	CTNAG	1 cut(s)	873
DpnI	GATC	3 cut(s)	138, 206, 378
DpnII	GATC	3 cut(s)	136, 204, 376
DriI	GACNNNNNGTC	1 cut(s)	1054
Eam1104I	CTCTTC	2 cut(s)	315, 551
Eam1105I	GACNNNNNGTC	1 cut(s)	1054
EarI	CTCTTC	2 cut(s)	315, 551
EciI	GGCGGA	2 cut(s)	24, 664
Eco105I	TACGTA	1 cut(s)	926
Eco130I	CCWWGG	1 cut(s)	352
Eco31I	GGTCTC	1 cut(s)	50
Eco32I	GATATC	1 cut(s)	214
Eco47I	GGWCC	1 cut(s)	425
Eco57I	CTGAAG	3 cut(s)	459, 759, 1164
EcoRII	CCWGG	2 cut(s)	65, 363
EcoRV	GATATC	1 cut(s)	214
EcoT14I	CCWWGG	1 cut(s)	352
EcoT22I	ATGCAT	1 cut(s)	622
ErhI	CCWWGG	1 cut(s)	352
FaeI	CATG	7 cut(s)	356, 685, 893, 1033, 1120, 1128, 1137
FalI	AAGNNNNNCTT	2 cut(s)	757, 789
FaqI	GGGAC	2 cut(s)	1056, 1061
FatI	CATG	7 cut(s)	352, 681, 889, 1029, 1116, 1124, 1133
FblI	GTMKAC	2 cut(s)	269, 1061
Fnu4HI	GCNGC	9 cut(s)	12, 38, 41, 44, 47, 174, 177, 588, 762
FokI	GGATG	2 cut(s)	450, 620
Fsp4HI	GCNGC	9 cut(s)	12, 38, 41, 44, 47, 174, 177, 588, 762
FspAI	RTGCGCAY	1 cut(s)	612
FspBI	CTAG	1 cut(s)	786
FspI	TGCGCA	1 cut(s)	612
GlaI	GCGC	1 cut(s)	612
GluI	GCNGC	9 cut(s)	12, 38, 41, 44, 47, 174, 177, 588, 762
GsaI	CCCAGC	2 cut(s)	861, 1020
GsuI	CTGGAG	2 cut(s)	347, 981
HaeIII	GGCC	2 cut(s)	105, 987
HapII	CCGG	3 cut(s)	53, 85, 456
HgaI	GACGC	1 cut(s)	179
HhaI	GCGC	1 cut(s)	613
Hin1I	GRCGYC	1 cut(s)	171
Hin1II	CATG	7 cut(s)	356, 685, 893, 1033, 1120, 1128, 1137
Hin6I	GCGC	1 cut(s)	611
HinP1I	GCGC	1 cut(s)	611
HincII	GTYRAC	1 cut(s)	1042
HindII	GTYRAC	1 cut(s)	1042
HindIII	AAGCTT	1 cut(s)	1089
HinfI	GANTC	8 cut(s)	5, 439, 566, 685, 782, 845, 953, 1084
HpaII	CCGG	3 cut(s)	53, 85, 456
HphI	GGTGA	1 cut(s)	425
Hpy166II	GTNNAC	3 cut(s)	270, 1042, 1062
Hpy188I	TCNGA	7 cut(s)	330, 400, 444, 778, 876, 1083, 1144
Hpy188III	TCNNGA	4 cut(s)	140, 249, 477, 786
Hpy8I	GTNNAC	3 cut(s)	270, 1042, 1062
Hpy99I	CGWCG	3 cut(s)	161, 173, 204
HpyAV	CCTTC	4 cut(s)	137, 404, 495, 1090
HpyCH4III	ACNGT	3 cut(s)	562, 901, 1070
HpyCH4IV	ACGT	2 cut(s)	910, 925
HpyCH4V	TGCA	7 cut(s)	179, 431, 590, 620, 665, 728, 764
HpyF10VI	GCNNNNNNNGC	5 cut(s)	43, 46, 111, 617, 770
HpyF3I	CTNAG	1 cut(s)	873
HpySE526I	ACGT	2 cut(s)	910, 925
Hsp92I	GRCGYC	1 cut(s)	171
Hsp92II	CATG	7 cut(s)	356, 685, 893, 1033, 1120, 1128, 1137
HspAI	GCGC	1 cut(s)	611
Kzo9I	GATC	3 cut(s)	136, 204, 376
LguI	GCTCTTC	1 cut(s)	551
LmnI	GCTCC	6 cut(s)	19, 119, 310, 560, 1000, 1099
Lsp1109I	GCAGC	3 cut(s)	163, 574, 748
LweI	GCATC	3 cut(s)	598, 629, 748
MaeI	CTAG	1 cut(s)	786
MaeII	ACGT	2 cut(s)	910, 925
MaeIII	GTNAC	2 cut(s)	148, 1000
MalI	GATC	3 cut(s)	138, 206, 378
MbiI	CCGCTC	1 cut(s)	14
MboI	GATC	3 cut(s)	136, 204, 376
MboII	GAAGA	5 cut(s)	332, 465, 538, 840, 1045
MflI	RGATCY	1 cut(s)	204
MhlI	GDGCHC	1 cut(s)	116
MluCI	AATT	6 cut(s)	118, 532, 863, 943, 1021, 1051
MlyI	GAGTC	4 cut(s)	14, 448, 791, 962
Mph1103I	ATGCAT	1 cut(s)	622
MroXI	GAANNNNTTC	1 cut(s)	545
MseI	TTAA	2 cut(s)	219, 746
MslI	CAYNNNNRTG	1 cut(s)	733
MspA1I	CMGCKG	1 cut(s)	176
MspI	CCGG	3 cut(s)	53, 85, 456
MspR9I	CCNGG	3 cut(s)	67, 365, 456
MvaI	CCWGG	2 cut(s)	67, 365
MvnI	CGCG	1 cut(s)	250
MwoI	GCNNNNNNNGC	5 cut(s)	43, 46, 111, 617, 770
NciI	CCSGG	1 cut(s)	456
NcoI	CCATGG	1 cut(s)	352
NdeII	GATC	3 cut(s)	136, 204, 376
NlaIII	CATG	7 cut(s)	356, 685, 893, 1033, 1120, 1128, 1137
NlaIV	GGNNCC	1 cut(s)	71
NmeAIII	GCCGAG	1 cut(s)	81
NmuCI	GTSAC	1 cut(s)	148
NruI	TCGCGA	1 cut(s)	250
NsbI	TGCGCA	1 cut(s)	612
NsiI	ATGCAT	1 cut(s)	622
PciSI	GCTCTTC	1 cut(s)	551
PcsI	WCGNNNNNNNCGW	1 cut(s)	165
PdmI	GAANNNNTTC	1 cut(s)	545
PfeI	GAWTC	4 cut(s)	566, 685, 845, 1084
PkrI	GCNGC	9 cut(s)	13, 39, 42, 45, 48, 175, 178, 589, 763
Ple19I	CGATCG	1 cut(s)	139
PleI	GAGTC	4 cut(s)	13, 447, 790, 961
PpsI	GAGTC	4 cut(s)	13, 447, 790, 961
Ppu21I	YACGTR	1 cut(s)	926
PshAI	GACNNNNGTC	1 cut(s)	155
Psp6I	CCWGG	2 cut(s)	65, 363
PspFI	CCCAGC	2 cut(s)	857, 1016
PspGI	CCWGG	2 cut(s)	65, 363
PspN4I	GGNNCC	1 cut(s)	71
PspPI	GGNCC	2 cut(s)	425, 986
PsuI	RGATCY	1 cut(s)	204
PvuI	CGATCG	1 cut(s)	139
RruI	TCGCGA	1 cut(s)	250
RsaI	GTAC	5 cut(s)	134, 898, 903, 924, 1139
RsaNI	GTAC	5 cut(s)	133, 897, 902, 923, 1138
RseI	CAYNNNNRTG	1 cut(s)	733
SapI	GCTCTTC	1 cut(s)	551
SaqAI	TTAA	2 cut(s)	219, 746
SatI	GCNGC	9 cut(s)	12, 38, 41, 44, 47, 174, 177, 588, 762
Sau3AI	GATC	3 cut(s)	136, 204, 376
Sau96I	GGNCC	2 cut(s)	425, 986
SchI	GAGTC	4 cut(s)	14, 448, 791, 962
ScrFI	CCNGG	3 cut(s)	67, 365, 456
SduI	GDGCHC	1 cut(s)	116
SfaNI	GCATC	3 cut(s)	598, 629, 748
SfcI	CTRYAG	2 cut(s)	79, 561
SinI	GGWCC	1 cut(s)	425
SmiMI	CAYNNNNRTG	1 cut(s)	733
SmlI	CTYRAG	1 cut(s)	227
SmoI	CTYRAG	1 cut(s)	227
SnaBI	TACGTA	1 cut(s)	926
Sse9I	AATT	6 cut(s)	118, 532, 863, 943, 1021, 1051
SspMI	CTAG	1 cut(s)	786
StyD4I	CCNGG	3 cut(s)	65, 363, 454
StyI	CCWWGG	1 cut(s)	352
TaaI	ACNGT	3 cut(s)	562, 901, 1070
TaiI	ACGT	2 cut(s)	913, 928
TaqI	TCGA	3 cut(s)	139, 485, 956
TasI	AATT	6 cut(s)	118, 532, 863, 943, 1021, 1051
TatI	WGTACW	1 cut(s)	896
TauI	GCSGC	6 cut(s)	14, 40, 43, 46, 49, 176
TfiI	GAWTC	4 cut(s)	566, 685, 845, 1084
Tru1I	TTAA	2 cut(s)	219, 746
Tru9I	TTAA	2 cut(s)	219, 746
TscAI	CASTG	1 cut(s)	565
TseFI	GTSAC	1 cut(s)	148
TseI	GCWGC	3 cut(s)	176, 587, 761
Tsp45I	GTSAC	1 cut(s)	148
TspDTI	ATGAA	4 cut(s)	112, 597, 698, 1046
TspGWI	ACGGA	2 cut(s)	145, 217
TspRI	CASTG	1 cut(s)	565
VpaK11BI	GGWCC	1 cut(s)	425
XapI	RAATTY	2 cut(s)	532, 1021
XbaI	TCTAGA	1 cut(s)	785
XmiI	GTMKAC	2 cut(s)	269, 1061
XmnI	GAANNNNTTC	1 cut(s)	545
XspI	CTAG	1 cut(s)	786
Zsp2I	ATGCAT	1 cut(s)	622

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.