Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001238.1

Orthogroup ID

OG0000585

Physical Location & Seq

Genomic Coordinates Reverse (-)

162790 .. 166568

Gene Structure 3779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001238.1_g000036.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

atgacgcaacaccgcttcattatggtaacatttcccactcaaggccacatcaatccttccctccaattcgccaagcgtctcattcgcatcaccggtgtacatgtaacgtttgtcacgtccctctccgcccaccaccgcattggcaatagcattagtactcctagtgccttgaccttcgcccccttttccggcggatatgaccaaggtttaaagtccggggacgatcttcagcacttcatgtccgagctaaagcgtcgtggcaagcaagcgatcacggatcttgtagtgtctagtgcaagcgagggccacccttacacttgcctattgttcgcgttacttcttccttgggtggcggaactggcacgtgaactccacctcgcaaccgcgctcctttggattcagccagccacagttttcgacatatactactactacttcaacggctacaaagatctcatcaacaacaatactgctgctgatagtgacccttcctatgcagtagaaataccaggattgccgctagcgctgaagagccgcgaccttccttctttcattgttgctacgaatccgtacaacggagctgtccaattgttcgaagaacagttcgagaagctcggacaagaaagcaggccaatcatactagtgaacacgtttgatgcactagaaccggaggcgttaaaagcaatagacaggtacaacttgatcggaatcgggcctttaatgccatcggctttcttggacggcaaggacccgtccgataaatcattcggaggcgatcttttccagaagtcgaaggagtcaccgtacctggaatggctgaactcaaagccaaaagagtctgtcgtatacgtctcgtttgggagcatttccgtcctgtccaagattcaaatggaggaaattgcaaaaggtttgctggattccggacgtccttttctgtgggtgattagagaaaaccaaaagagtggacaaggtaaggaagagaaagaagacgaggagctgagttgcagagaggaactagaagagcttgggatgatagtcccgtggtgtagtcaagtggaggttctttcgaatccttcattgggttgttttgtgacacattgtgggtggaattcaagcttggagagtttggtttgtggggtaccagtggtggcatttccccagtggacagaccaaggcacaaatgccaagttgatagaggacatgtggaaaacaggggtgagggtagcactgaacgcggagggtgttgttgtgggtgaggagctcaagaggtgtctggatttggtcatgggaagtgaagagttgagaagcaatgctaagaaatggaaggagttggcaagagaggctgtgagtgaaggtggatcttccgataacaacctcaaggcatttttggatgacattggacccctcgaccccaagaatccagaaccagcggcagaaccaccagagcaggctggaaacctaccgaaccggccacaggaagctccaaactgcgcgcagcaaaacctccgtcggttcaccaccttctggacctctgattgccaccaaattttgtcagcaatagcgcctcgatatcatgattccagaactggtcagatcgtttcaagaacggctctaaaacttgtcgaacaggccacctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008194 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

545

Amino Acids

60.43

Weight (kDa)

5.23

Isoelectric Point (pI)

45.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15550
fragaria_vesca	FvH4_4g13000 FvH4_4g13010 FvH4_4g13020
malus_domestica	MD04G1019300.v1.1 MD04G1019400.v1.1 MD04G1019500.v1.1 MD04G1019600.v1.1 MD04G1019700.v1.1
prunus_persica	Prupe.1G169100_v2.0.a1 Prupe.1G169200_v2.0.a1 Prupe.1G169300_v2.0.a1
pyrus_communis	pycom04g01550 pycom04g01560 pycom04g01580 pycom12g16570
rosa_chinensis	RchiOBHm_Chr4g0412431 RchiOBHm_Chr4g0412441 RchiOBHm_Chr4g0412481 RchiOBHm_Chr4g0412491 RchiOBHm_Chr4g0412501 RchiOBHm_Chr4g0412731 RchiOBHm_Chr4g0412741
rosa_laevigata	RLG00000008262 RLG00000008264 RLG00000008266 RLG00000008267 RLG00000008285 RLG00000008286 RLG00000008299 RLG00000008300
rosa_multiflora	Rmu_co8207190.1_g000001 Rmu_co8436959.1_g000001 Rmu_co8466533.1_g000001 Rmu_sc0001238.1_g000017 Rmu_sc0001238.1_g000019 Rmu_sc0001238.1_g000022 Rmu_sc0001238.1_g000027 Rmu_sc0001238.1_g000036 Rmu_sc0003914.1_g000013 Rmu_sc0005615.1_g000006 Rmu_sc0008191.1_g000017
rosa_roxburghii	Rroxscaffold_161G00448030 Rroxscaffold_161G00448050 Rroxscaffold_5G00356580 Rroxscaffold_5G00356640 Rroxscaffold_5G00356700 Rroxscaffold_5G00356890 Rroxscaffold_5G00356930 Rroxscaffold_5G00356960
rosa_rugosa	Rorug04G0103500 Rorug04G0103600.1 Rorug04G0103800.1 Rorug04G0103900.1 Rorug04G0116000 Rorug04G0116000 Rorug04G0116000 Rorug04G0116300
rosa_samantha	Rh4AG173100 Rh4AG173400 Rh4AG175100 Rh4AG175200 Rh4BG172800 Rh4BG174400 Rh4BG174700 Rh4BG174800 Rh4CG183800 Rh4CG183900 Rh4CG184400 Rh4CG186100 Rh4DG168100 Rh4DG168800 Rh4DG171000 Rh4DG171200 Rh4DG171800 Rh4DG171900
rosa_wichuraiana	Rw0G007780 Rw4G014480 Rw4G014670 Rw4G014680 Rw4G014700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	928
Acc65I	GGTACC	1 cut(s)	1138
AccB1I	GGYRCC	1 cut(s)	1138
AccB7I	CCANNNNNTGG	1 cut(s)	1524
AccI	GTMKAC	1 cut(s)	846
AccII	CGCG	5 cut(s)	332, 386, 537, 1235, 1493
AccIII	TCCGGA	1 cut(s)	920
AclI	AACGTT	1 cut(s)	107
AclWI	GGATC	2 cut(s)	285, 1366
AcoI	YGGCCR	1 cut(s)	1469
AcsI	RAATTY	2 cut(s)	1108, 1545
AcuI	CTGAAG	2 cut(s)	212, 548
AcvI	CACGTG	1 cut(s)	365
AcyI	GRCGYC	1 cut(s)	925
AdeI	CACNNNGTG	1 cut(s)	1100
AfaI	GTAC	6 cut(s)	99, 157, 572, 695, 806, 1140
AfeI	AGCGCT	1 cut(s)	525
AfiI	CCNNNNNNNGG	6 cut(s)	41, 188, 575, 1079, 1474, 1524
AflIII	ACRYGT	3 cut(s)	100, 648, 1200
AgeI	ACCGGT	1 cut(s)	92
AgsI	TTSAA	4 cut(s)	439, 887, 1113, 1602
AhlI	ACTAGT	1 cut(s)	640
AjiI	CACGTC	1 cut(s)	117
AjnI	CCWGG	2 cut(s)	508, 807
AjuI	GAANNNNNNNTTGG	4 cut(s)	1061, 1093, 1100, 1132
AluBI	AGCT	8 cut(s)	247, 581, 613, 997, 1024, 1116, 1261, 1481
AluI	AGCT	8 cut(s)	247, 581, 613, 997, 1024, 1116, 1261, 1481
Alw21I	GWGCWC	1 cut(s)	1263
Alw26I	GTCTC	2 cut(s)	83, 856
AlwI	GGATC	2 cut(s)	285, 1366
Aor13HI	TCCGGA	1 cut(s)	920
Aor51HI	AGCGCT	1 cut(s)	525
AoxI	GGCC	6 cut(s)	43, 304, 629, 713, 1469, 1629
ApeKI	GCWGC	2 cut(s)	473, 1495
ApoI	RAATTY	2 cut(s)	1108, 1545
ArsI	GACNNNNNNTTYG	2 cut(s)	1492, 1524
AsiGI	ACCGGT	1 cut(s)	92
Asp718I	GGTACC	1 cut(s)	1138
AspLEI	GCGC	5 cut(s)	388, 526, 1493, 1495, 1564
AspS9I	GGNCC	5 cut(s)	304, 713, 748, 1400, 1527
AsuC2I	CCSGG	1 cut(s)	217
AsuHPI	GGTGA	6 cut(s)	82, 792, 952, 1228, 1265, 1507
AsuII	TTCGAA	2 cut(s)	594, 1067
AsuNHI	GCTAGC	1 cut(s)	520
AvaII	GGWCC	3 cut(s)	748, 1400, 1527
BanI	GGYRCC	1 cut(s)	1138
BanII	GRGCYC	1 cut(s)	1263
BbrPI	CACGTG	1 cut(s)	365
BbsI	GAAGAC	1 cut(s)	993
Bbv12I	GWGCWC	1 cut(s)	1263
BbvI	GCAGC	2 cut(s)	460, 1507
BccI	CCATC	1 cut(s)	733
BceAI	ACGGC	3 cut(s)	457, 757, 1623
BciT130I	CCWGG	2 cut(s)	510, 809
BcnI	CCSGG	1 cut(s)	217
BcoDI	GTCTC	2 cut(s)	83, 856
BcuI	ACTAGT	1 cut(s)	640
BfaI	CTAG	6 cut(s)	162, 291, 521, 641, 662, 1016
BfoI	RGCGCY	2 cut(s)	527, 1565
BglII	AGATCT	1 cut(s)	451
BisI	GCNGC	5 cut(s)	474, 518, 535, 1431, 1496
BlsI	GCNGC	5 cut(s)	475, 519, 536, 1432, 1497
BmcAI	AGTACT	1 cut(s)	157
Bme1390I	CCNGG	3 cut(s)	217, 510, 809
Bme18I	GGWCC	3 cut(s)	748, 1400, 1527
BmgBI	CACGTC	1 cut(s)	117
BmgT120I	GGNCC	5 cut(s)	304, 713, 748, 1400, 1527
BmiI	GGNNCC	3 cut(s)	750, 1140, 1402
BmrFI	CCNGG	3 cut(s)	217, 510, 809
BmrI	ACTGGG	1 cut(s)	1153
BmsI	GCATC	2 cut(s)	96, 646
BmtI	GCTAGC	1 cut(s)	524
BmuI	ACTGGG	1 cut(s)	1153
BpiI	GAAGAC	1 cut(s)	993
Bpu14I	TTCGAA	2 cut(s)	594, 1067
BpuEI	CTTGAG	3 cut(s)	24, 1247, 1361
BpuMI	CCSGG	1 cut(s)	217
BsaAI	YACGTR	1 cut(s)	365
BsaBI	GATNNNNATC	1 cut(s)	707
BsaHI	GRCGYC	1 cut(s)	925
BsaJI	CCNNGG	5 cut(s)	202, 216, 344, 1040, 1171
BsaWI	WCCGGW	3 cut(s)	92, 667, 920
BsaXI	ACNNNNNCTCC	4 cut(s)	354, 384, 788, 818
Bsc4I	CCNNNNNNNGG	6 cut(s)	41, 188, 575, 1079, 1474, 1524
Bse118I	RCCGGY	2 cut(s)	92, 1467
Bse1I	ACTGG	4 cut(s)	363, 1142, 1159, 1591
Bse3DI	GCAATG	1 cut(s)	1315
Bse8I	GATNNNNATC	1 cut(s)	707
BseAI	TCCGGA	1 cut(s)	920
BseBI	CCWGG	2 cut(s)	510, 809
BseDI	CCNNGG	5 cut(s)	202, 216, 344, 1040, 1171
BseGI	GGATG	2 cut(s)	1035, 1396
BseJI	GATNNNNATC	1 cut(s)	707
BseLI	CCNNNNNNNGG	6 cut(s)	41, 188, 575, 1079, 1474, 1524
BseMI	GCAATG	1 cut(s)	1315
BseMII	CTCAG	1 cut(s)	989
BseNI	ACTGG	4 cut(s)	363, 1142, 1159, 1591
BsePI	GCGCGC	1 cut(s)	1491
BseRI	GAGGAG	2 cut(s)	1007, 1271
BseXI	GCAGC	2 cut(s)	460, 1507
Bsh1236I	CGCG	5 cut(s)	332, 386, 537, 1235, 1493
BshFI	GGCC	6 cut(s)	45, 306, 631, 715, 1471, 1631
BshNI	GGYRCC	1 cut(s)	1138
BshTI	ACCGGT	1 cut(s)	92
BsiHKAI	GWGCWC	1 cut(s)	1263
BsiSI	CCGG	6 cut(s)	93, 189, 216, 668, 921, 1468
BslFI	GGGAC	3 cut(s)	103, 233, 1022
BslI	CCNNNNNNNGG	6 cut(s)	41, 188, 575, 1079, 1474, 1524
BsmAI	GTCTC	2 cut(s)	83, 856
BsmBI	CGTCTC	2 cut(s)	83, 856
BsmFI	GGGAC	3 cut(s)	103, 233, 1022
BsnI	GGCC	6 cut(s)	45, 306, 631, 715, 1471, 1631
Bsp119I	TTCGAA	2 cut(s)	594, 1067
Bsp1286I	GDGCHC	1 cut(s)	1263
Bsp13I	TCCGGA	1 cut(s)	920
Bsp1407I	TGTACA	1 cut(s)	97
Bsp143I	GATC	8 cut(s)	223, 270, 277, 451, 702, 775, 1358, 1593
BspANI	GGCC	6 cut(s)	45, 306, 631, 715, 1471, 1631
BspCNI	CTCAG	1 cut(s)	990
BspEI	TCCGGA	1 cut(s)	920
BspFNI	CGCG	5 cut(s)	332, 386, 537, 1235, 1493
BspHI	TCATGA	1 cut(s)	1573
BspLI	GGNNCC	3 cut(s)	750, 1140, 1402
BspOI	GCTAGC	1 cut(s)	524
BspPI	GGATC	2 cut(s)	285, 1366
BspQI	GCTCTTC	2 cut(s)	524, 1014
BspT104I	TTCGAA	2 cut(s)	594, 1067
BspT107I	GGYRCC	1 cut(s)	1138
BsrDI	GCAATG	1 cut(s)	1315
BsrFI	RCCGGY	2 cut(s)	92, 1467
BsrGI	TGTACA	1 cut(s)	97
BsrI	ACTGG	4 cut(s)	363, 1142, 1159, 1591
BssAI	RCCGGY	2 cut(s)	92, 1467
BssECI	CCNNGG	5 cut(s)	202, 216, 344, 1040, 1171
BssHII	GCGCGC	1 cut(s)	1491
BssMI	GATC	8 cut(s)	223, 270, 277, 451, 702, 775, 1358, 1593
BssNAI	GTATAC	1 cut(s)	847
BssNI	GRCGYC	1 cut(s)	925
BssT1I	CCWWGG	3 cut(s)	202, 344, 1171
Bst1107I	GTATAC	1 cut(s)	847
Bst2UI	CCWGG	2 cut(s)	510, 809
Bst4CI	ACNGT	3 cut(s)	412, 603, 804
Bst6I	CTCTTC	4 cut(s)	524, 972, 1014, 1290
BstACI	GRCGYC	1 cut(s)	925
BstAUI	TGTACA	1 cut(s)	97
BstBAI	YACGTR	1 cut(s)	365
BstBI	TTCGAA	2 cut(s)	594, 1067
BstC8I	GCNNGC	8 cut(s)	263, 267, 298, 405, 522, 629, 1449, 1493
BstDEI	CTNAG	2 cut(s)	998, 1314
BstDSI	CCRYGG	1 cut(s)	1040
BstF5I	GGATG	2 cut(s)	1035, 1396
BstFNI	CGCG	5 cut(s)	332, 386, 537, 1235, 1493
BstH2I	RGCGCY	2 cut(s)	527, 1565
BstHHI	GCGC	5 cut(s)	388, 526, 1493, 1495, 1564
BstKTI	GATC	8 cut(s)	226, 273, 280, 454, 705, 778, 1361, 1596
BstMAI	GTCTC	2 cut(s)	83, 856
BstMBI	GATC	8 cut(s)	223, 270, 277, 451, 702, 775, 1358, 1593
BstMWI	GCNNNNNNNGC	6 cut(s)	359, 523, 680, 721, 1232, 1340
BstNI	CCWGG	2 cut(s)	510, 809
BstNSI	RCATGY	2 cut(s)	104, 1204
BstSCI	CCNGG	3 cut(s)	215, 508, 807
BstUI	CGCG	5 cut(s)	332, 386, 537, 1235, 1493
BstV1I	GCAGC	2 cut(s)	460, 1507
BstV2I	GAAGAC	1 cut(s)	993
BstX2I	RGATCY	3 cut(s)	277, 451, 1358
BstXI	CCANNNNNNTGG	2 cut(s)	140, 962
BstYI	RGATCY	3 cut(s)	277, 451, 1358
BstZ17I	GTATAC	1 cut(s)	847
BsuRI	GGCC	6 cut(s)	45, 306, 631, 715, 1471, 1631
BtgI	CCRYGG	1 cut(s)	1040
BtrI	CACGTC	1 cut(s)	117
BtsCI	GGATG	2 cut(s)	1035, 1396
BtsIMutI	CAGTG	3 cut(s)	1149, 1166, 1226
Cac8I	GCNNGC	8 cut(s)	263, 267, 298, 405, 522, 629, 1449, 1493
CciI	TCATGA	1 cut(s)	1573
CfoI	GCGC	5 cut(s)	388, 526, 1493, 1495, 1564
Cfr10I	RCCGGY	2 cut(s)	92, 1467
Cfr13I	GGNCC	5 cut(s)	304, 713, 748, 1400, 1527
CseI	GACGC	3 cut(s)	13, 65, 242
Csp6I	GTAC	6 cut(s)	98, 156, 571, 694, 805, 1139
CspAI	ACCGGT	1 cut(s)	92
CviAII	CATG	5 cut(s)	101, 238, 1201, 1285, 1574
CviQI	GTAC	6 cut(s)	98, 156, 571, 694, 805, 1139
DdeI	CTNAG	2 cut(s)	998, 1314
DpnI	GATC	8 cut(s)	225, 272, 279, 453, 704, 777, 1360, 1595
DpnII	GATC	8 cut(s)	223, 270, 277, 451, 702, 775, 1358, 1593
DraI	TTTAAA	1 cut(s)	210
DraIII	CACNNNGTG	1 cut(s)	1100
EaeI	YGGCCR	1 cut(s)	1469
Eam1104I	CTCTTC	4 cut(s)	524, 972, 1014, 1290
EarI	CTCTTC	4 cut(s)	524, 972, 1014, 1290
EciI	GGCGGA	3 cut(s)	115, 207, 368
Ecl136II	GAGCTC	1 cut(s)	1261
Eco130I	CCWWGG	3 cut(s)	202, 344, 1171
Eco24I	GRGCYC	1 cut(s)	1263
Eco32I	GATATC	1 cut(s)	1571
Eco47I	GGWCC	3 cut(s)	748, 1400, 1527
Eco47III	AGCGCT	1 cut(s)	525
Eco53kI	GAGCTC	1 cut(s)	1261
Eco57I	CTGAAG	2 cut(s)	212, 548
Eco72I	CACGTG	1 cut(s)	365
EcoICRI	GAGCTC	1 cut(s)	1261
EcoO109I	RGGNCCY	1 cut(s)	748
EcoRI	GAATTC	1 cut(s)	1108
EcoRII	CCWGG	2 cut(s)	508, 807
EcoRV	GATATC	1 cut(s)	1571
EcoT14I	CCWWGG	3 cut(s)	202, 344, 1171
EcoT38I	GRGCYC	1 cut(s)	1263
ErhI	CCWWGG	3 cut(s)	202, 344, 1171
Esp3I	CGTCTC	2 cut(s)	83, 856
FaeI	CATG	5 cut(s)	104, 241, 1204, 1288, 1577
FaqI	GGGAC	3 cut(s)	103, 233, 1022
FatI	CATG	5 cut(s)	100, 237, 1200, 1284, 1573
FblI	GTMKAC	1 cut(s)	846
Fnu4HI	GCNGC	5 cut(s)	474, 518, 535, 1431, 1496
FokI	GGATG	2 cut(s)	1042, 1403
FriOI	GRGCYC	1 cut(s)	1263
Fsp4HI	GCNGC	5 cut(s)	474, 518, 535, 1431, 1496
FspBI	CTAG	6 cut(s)	162, 291, 521, 641, 662, 1016
GlaI	GCGC	5 cut(s)	387, 525, 1492, 1494, 1563
GluI	GCNGC	5 cut(s)	474, 518, 535, 1431, 1496
HaeII	RGCGCY	2 cut(s)	527, 1565
HaeIII	GGCC	6 cut(s)	45, 306, 631, 715, 1471, 1631
HapII	CCGG	6 cut(s)	93, 189, 216, 668, 921, 1468
HgaI	GACGC	3 cut(s)	13, 65, 242
HhaI	GCGC	5 cut(s)	388, 526, 1493, 1495, 1564
Hin1I	GRCGYC	1 cut(s)	925
Hin1II	CATG	5 cut(s)	104, 241, 1204, 1288, 1577
Hin6I	GCGC	5 cut(s)	386, 524, 1491, 1493, 1562
HinP1I	GCGC	5 cut(s)	386, 524, 1491, 1493, 1562
HindIII	AAGCTT	1 cut(s)	1114
HpaII	CCGG	6 cut(s)	93, 189, 216, 668, 921, 1468
HphI	GGTGA	6 cut(s)	82, 792, 952, 1228, 1265, 1507
Hpy166II	GTNNAC	7 cut(s)	98, 368, 646, 847, 965, 1164, 1515
Hpy188I	TCNGA	8 cut(s)	244, 617, 707, 757, 770, 1366, 1534, 1593
Hpy8I	GTNNAC	7 cut(s)	98, 368, 646, 847, 965, 1164, 1515
Hpy99I	CGWCG	2 cut(s)	258, 1512
HpyCH4III	ACNGT	3 cut(s)	412, 603, 804
HpyCH4IV	ACGT	6 cut(s)	107, 116, 364, 650, 849, 925
HpyCH4V	TGCA	5 cut(s)	296, 497, 659, 902, 1005
HpyF10VI	GCNNNNNNNGC	6 cut(s)	359, 523, 680, 721, 1232, 1340
HpyF3I	CTNAG	2 cut(s)	998, 1314
HpySE526I	ACGT	6 cut(s)	107, 116, 364, 650, 849, 925
Hsp92I	GRCGYC	1 cut(s)	925
Hsp92II	CATG	5 cut(s)	104, 241, 1204, 1288, 1577
HspAI	GCGC	5 cut(s)	386, 524, 1491, 1493, 1562
Kpn2I	TCCGGA	1 cut(s)	920
KpnI	GGTACC	1 cut(s)	1142
Kzo9I	GATC	8 cut(s)	223, 270, 277, 451, 702, 775, 1358, 1593
LguI	GCTCTTC	2 cut(s)	524, 1014
LmnI	GCTCC	6 cut(s)	393, 578, 861, 994, 1258, 1486
Lsp1109I	GCAGC	2 cut(s)	460, 1507
LweI	GCATC	2 cut(s)	96, 646
MaeI	CTAG	6 cut(s)	162, 291, 521, 641, 662, 1016
MaeII	ACGT	6 cut(s)	107, 116, 364, 650, 849, 925
MaeIII	GTNAC	7 cut(s)	25, 103, 112, 333, 482, 798, 1090
MalI	GATC	8 cut(s)	225, 272, 279, 453, 704, 777, 1360, 1595
MboI	GATC	8 cut(s)	223, 270, 277, 451, 702, 775, 1358, 1593
MboII	GAAGA	9 cut(s)	218, 332, 541, 608, 989, 998, 1031, 1307, 1353
MfeI	CAATTG	1 cut(s)	587
MflI	RGATCY	3 cut(s)	277, 451, 1358
MhlI	GDGCHC	1 cut(s)	1263
MluCI	AATT	5 cut(s)	65, 587, 897, 1108, 1545
MlyI	GAGTC	2 cut(s)	806, 845
MroI	TCCGGA	1 cut(s)	920
MseI	TTAA	3 cut(s)	209, 677, 719
MslI	CAYNNNNRTG	1 cut(s)	641
MspA1I	CMGCKG	1 cut(s)	1430
MspI	CCGG	6 cut(s)	93, 189, 216, 668, 921, 1468
MspR9I	CCNGG	3 cut(s)	217, 510, 809
MunI	CAATTG	1 cut(s)	587
MvaI	CCWGG	2 cut(s)	510, 809
MvnI	CGCG	5 cut(s)	332, 386, 537, 1235, 1493
MwoI	GCNNNNNNNGC	6 cut(s)	359, 523, 680, 721, 1232, 1340
NciI	CCSGG	1 cut(s)	217
NdeII	GATC	8 cut(s)	223, 270, 277, 451, 702, 775, 1358, 1593
NheI	GCTAGC	1 cut(s)	520
NlaIII	CATG	5 cut(s)	104, 241, 1204, 1288, 1577
NlaIV	GGNNCC	3 cut(s)	750, 1140, 1402
NmuCI	GTSAC	4 cut(s)	112, 482, 798, 1090
NspI	RCATGY	2 cut(s)	104, 1204
NspV	TTCGAA	2 cut(s)	594, 1067
PagI	TCATGA	1 cut(s)	1573
PauI	GCGCGC	1 cut(s)	1491
PciI	ACATGT	2 cut(s)	100, 1200
PciSI	GCTCTTC	2 cut(s)	524, 1014
PcsI	WCGNNNNNNNCGW	1 cut(s)	113
PfeI	GAWTC	8 cut(s)	397, 565, 708, 883, 917, 1069, 1417, 1577
PflMI	CCANNNNNTGG	1 cut(s)	1524
PinAI	ACCGGT	1 cut(s)	92
PkrI	GCNGC	5 cut(s)	475, 519, 536, 1432, 1497
PleI	GAGTC	2 cut(s)	805, 844
PmaCI	CACGTG	1 cut(s)	365
PmlI	CACGTG	1 cut(s)	365
PpsI	GAGTC	2 cut(s)	805, 844
Ppu21I	YACGTR	1 cut(s)	365
PpuMI	RGGWCCY	1 cut(s)	748
PscI	ACATGT	2 cut(s)	100, 1200
Psp124BI	GAGCTC	1 cut(s)	1263
Psp1406I	AACGTT	1 cut(s)	107
Psp5II	RGGWCCY	1 cut(s)	748
Psp6I	CCWGG	2 cut(s)	508, 807
PspCI	CACGTG	1 cut(s)	365
PspGI	CCWGG	2 cut(s)	508, 807
PspN4I	GGNNCC	3 cut(s)	750, 1140, 1402
PspPI	GGNCC	5 cut(s)	304, 713, 748, 1400, 1527
PspPPI	RGGWCCY	1 cut(s)	748
PsuI	RGATCY	3 cut(s)	277, 451, 1358
PteI	GCGCGC	1 cut(s)	1491
RsaI	GTAC	6 cut(s)	99, 157, 572, 695, 806, 1140
RsaNI	GTAC	6 cut(s)	98, 156, 571, 694, 805, 1139
RseI	CAYNNNNRTG	1 cut(s)	641
SacI	GAGCTC	1 cut(s)	1263
SapI	GCTCTTC	2 cut(s)	524, 1014
SaqAI	TTAA	3 cut(s)	209, 677, 719
SatI	GCNGC	5 cut(s)	474, 518, 535, 1431, 1496
Sau3AI	GATC	8 cut(s)	223, 270, 277, 451, 702, 775, 1358, 1593
Sau96I	GGNCC	5 cut(s)	304, 713, 748, 1400, 1527
ScaI	AGTACT	1 cut(s)	157
SchI	GAGTC	2 cut(s)	806, 845
ScrFI	CCNGG	3 cut(s)	217, 510, 809
SduI	GDGCHC	1 cut(s)	1263
SfaNI	GCATC	2 cut(s)	96, 646
SfuI	TTCGAA	2 cut(s)	594, 1067
SgrAI	CRCCGGYG	1 cut(s)	92
SinI	GGWCC	3 cut(s)	748, 1400, 1527
SmiMI	CAYNNNNRTG	1 cut(s)	641
SmlI	CTYRAG	3 cut(s)	39, 1262, 1376
SmoI	CTYRAG	3 cut(s)	39, 1262, 1376
SpeI	ACTAGT	1 cut(s)	640
Sse9I	AATT	5 cut(s)	65, 587, 897, 1108, 1545
SspMI	CTAG	6 cut(s)	162, 291, 521, 641, 662, 1016
SstI	GAGCTC	1 cut(s)	1263
StyD4I	CCNGG	3 cut(s)	215, 508, 807
StyI	CCWWGG	3 cut(s)	202, 344, 1171
TaaI	ACNGT	3 cut(s)	412, 603, 804
TaiI	ACGT	6 cut(s)	110, 119, 367, 653, 852, 928
TaqI	TCGA	8 cut(s)	417, 594, 606, 791, 1067, 1407, 1567, 1623
TasI	AATT	5 cut(s)	65, 587, 897, 1108, 1545
TatI	WGTACW	2 cut(s)	97, 155
TauI	GCSGC	3 cut(s)	520, 537, 1433
TfiI	GAWTC	8 cut(s)	397, 565, 708, 883, 917, 1069, 1417, 1577
Tru1I	TTAA	3 cut(s)	209, 677, 719
Tru9I	TTAA	3 cut(s)	209, 677, 719
TscAI	CASTG	3 cut(s)	1149, 1166, 1233
TseFI	GTSAC	4 cut(s)	112, 482, 798, 1090
TseI	GCWGC	2 cut(s)	473, 1495
Tsp45I	GTSAC	4 cut(s)	112, 482, 798, 1090
TspDTI	ATGAA	4 cut(s)	7, 226, 541, 1065
TspGWI	ACGGA	5 cut(s)	290, 558, 591, 859, 1496
TspRI	CASTG	3 cut(s)	1149, 1166, 1233
Van91I	CCANNNNNTGG	1 cut(s)	1524
VpaK11BI	GGWCC	3 cut(s)	748, 1400, 1527
XapI	RAATTY	2 cut(s)	1108, 1545
XceI	RCATGY	2 cut(s)	104, 1204
XcmI	CCANNNNNNNNNTGG	2 cut(s)	137, 886
XmiI	GTMKAC	1 cut(s)	846
XspI	CTAG	6 cut(s)	162, 291, 521, 641, 662, 1016
ZraI	GACGTC	1 cut(s)	926
ZrmI	AGTACT	1 cut(s)	157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.