pycom04g01560

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
1507781 .. 1509512
1732 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g01560.1

Sequence Viewer

Length: 1677 bp
ATGCATTGGCAACCACAAGTATCCTTCTCATCTTGGCAAATTTGTCTCCAGCCCTTGCCATCCTCTCACCGCACTCCCCACCTTGAATGTATACTCCCACAAGAATTTCAACTTCACTCAGCTAATAAGCCCACAACACCAAATTTTTCAACAATCAACTACATACCTACTTATTCTACTTCCAATAACTCCACACTCCACCGCGCACCTCCGGCAATCGCATACGCCGCCATGGTGCAACACCGCTTTCTACTCGTCACATATCCAGCTCAAGGCCACATCAACCCTTCCCTCCAATTCGCCAAGCGCCTTATCAACACCACAGGTGCGCATGTCACCTACGTCACCAGTCTCTCAGCCCATCGCCGTATAGGCAATGGCTCAATTCCAGATGGATTGACCTATGCGCCCTTCTCTGATGGGTACGACGACGGGTTTAAGCCCGGTGACAACATCGACGACTACATGTCGGAGCTGCGGCGCCGCGGAGCACAAGCCATCACCGACCTTGTAGTCGCAAGTGCAAACGAGGGTCATCCTTACACTTGCCTAGTCTACTCATTAATTGTCCCTTGGTCGGCAGGGGTGGCACATGAACTTCACCTCCCAAGCGTGCTGCTTTGGATTCAGCCAGCCACGGTTTTCGACATCTACTACTATTACTTTAATGGGTACAAAGATCTTATCCGGGATAATACTAGTTCTGGTACGAACAATGTCCTTCCATGTTCAATTGAATTACCAGGTTTACCATTATCTTTCACAAGCCGAGACCTTCCCTCCTTCATGGTGGATACAAATCCGTACAATTTCGCCCTCCCGTTGTTTCAAGAACAGATGGAGCTGCTGGAAAGAGAAACCAATCCGACCATTCTAGTGAACACGTTCGATGCACTAGAGCCGGAAGCCTTAAAAGCAATTGACAAGTACAACTTGATTGGTGTCGGGCCATTGATTCCGTCCGCTTTCTTGGACGGCAAGGATCCATCGGACAAGTCATTTGGAGGCGATCTTGTCCAAAAATCAAGGGACTCTTCGTACCTCGAGTGGCTGAACTCGAAGCCAGAAGGGTCGGTGATTTATGTGTCCTTCGGAAGCATTTCTGTGTTGGGAAAGGCCCAAATGGAGGAAATCGCAAAAGGGTTGTTGGATTGCGGCCTTCCGTTCTTTTGGGTTATTAGAGATAAGGTCGACAAGAAGGGAGATGATAACGAGGCGAAGCAAGAAGAAGCGATGTTGAGTTGTAGAGTGGAATTGGAAGAGCTCGGGAGGATAGTGCCGTGGTGTAGTCAAGTGGAGGTTCTCTCTAGTCCTTCGTTGGGTTGCTTTGTGACACATTGTGGGTGGAATTCAAGTTTGGAGAGCTTGGTTTCAGGGGTGCCCGTGGTGGCGTTTCCTCAGTGGACGGACCAAGGGACGAATGCCAAGTTGATAGAGGACTTTTGGAAGACAGGAGTGAGGGTGACACCAAATGTGGAGGGGATTGTTACGGGTGAGGAGCTCAAGAGGTGCTTGGATTTGGTATTGGGAAGTGGGGAGATTGGTGAAGAGGTGAGAAGGAATGCTAAGAAATGGAAAGATTTGGCAAGAGAGGCTGTGAATGAAGGGGGCTCTTCGGACAAGAATCTCAAGGCTTTCTTGGATCAGATCAAGGTTCTAAAAGATGTTAGGCACTAG

Protein Analysis

559

Amino Acids

62.01

Weight (kDa)

5.32

Isoelectric Point (pI)

41.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 345 - 509 5.4e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000585)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15550
fragaria_vesca FvH4_4g13000 FvH4_4g13010 FvH4_4g13020
malus_domestica MD04G1019300.v1.1 MD04G1019400.v1.1 MD04G1019500.v1.1 MD04G1019600.v1.1 MD04G1019700.v1.1
prunus_persica Prupe.1G169100_v2.0.a1 Prupe.1G169200_v2.0.a1 Prupe.1G169300_v2.0.a1
pyrus_communis pycom04g01550 pycom04g01560 pycom04g01580 pycom12g16570
rosa_chinensis RchiOBHm_Chr4g0412431 RchiOBHm_Chr4g0412441 RchiOBHm_Chr4g0412481 RchiOBHm_Chr4g0412491 RchiOBHm_Chr4g0412501 RchiOBHm_Chr4g0412731 RchiOBHm_Chr4g0412741
rosa_laevigata RLG00000008262 RLG00000008264 RLG00000008266 RLG00000008267 RLG00000008285 RLG00000008286 RLG00000008299 RLG00000008300
rosa_multiflora Rmu_co8207190.1_g000001 Rmu_co8436959.1_g000001 Rmu_co8466533.1_g000001 Rmu_sc0001238.1_g000017 Rmu_sc0001238.1_g000019 Rmu_sc0001238.1_g000022 Rmu_sc0001238.1_g000027 Rmu_sc0001238.1_g000036 Rmu_sc0003914.1_g000013 Rmu_sc0005615.1_g000006 Rmu_sc0008191.1_g000017
rosa_roxburghii Rroxscaffold_161G00448030 Rroxscaffold_161G00448050 Rroxscaffold_5G00356580 Rroxscaffold_5G00356640 Rroxscaffold_5G00356700 Rroxscaffold_5G00356890 Rroxscaffold_5G00356930 Rroxscaffold_5G00356960
rosa_rugosa Rorug04G0103500 Rorug04G0103600.1 Rorug04G0103800.1 Rorug04G0103900.1 Rorug04G0116000 Rorug04G0116000 Rorug04G0116000 Rorug04G0116300
rosa_samantha Rh4AG173100 Rh4AG173400 Rh4AG175100 Rh4AG175200 Rh4BG172800 Rh4BG174400 Rh4BG174700 Rh4BG174800 Rh4CG183800 Rh4CG183900 Rh4CG184400 Rh4CG186100 Rh4DG168100 Rh4DG168800 Rh4DG171000 Rh4DG171200 Rh4DG171800 Rh4DG171900
rosa_wichuraiana Rw0G007780 Rw4G014480 Rw4G014670 Rw4G014680 Rw4G014700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 512
Acc16I TGCGCA 1 cut(s) 330
AccB1I GGYRCC 2 cut(s) 480, 1378
AccI GTMKAC 3 cut(s) 91, 555, 1191
AccII CGCG 2 cut(s) 204, 486
AciI CCGC 9 cut(s) 70, 202, 228, 244, 478, 484, 486, 963, 1155
AclWI GGATC 3 cut(s) 977, 990, 1650
AcsI RAATTY 4 cut(s) 39, 104, 142, 1348
AcyI GRCGYC 1 cut(s) 481
AdeI CACNNNGTG 1 cut(s) 1340
AfaI GTAC 6 cut(s) 425, 674, 709, 806, 929, 1040
AfiI CCNNNNNNNGG 4 cut(s) 272, 577, 1126, 1319
AflIII ACRYGT 2 cut(s) 465, 882
AgsI TTSAA 7 cut(s) 86, 110, 150, 732, 737, 830, 1353
AhdI GACNNNNNGTC 1 cut(s) 466
AhlI ACTAGT 1 cut(s) 698
AjnI CCWGG 1 cut(s) 742
AjuI GAANNNNNNNTTGG 2 cut(s) 1340, 1372
AloI GAACNNNNNNTCC 2 cut(s) 588, 620
AluBI AGCT 7 cut(s) 122, 269, 475, 844, 1264, 1365, 1501
AluI AGCT 7 cut(s) 122, 269, 475, 844, 1264, 1365, 1501
Alw21I GWGCWC 3 cut(s) 493, 1266, 1503
Alw26I GTCTC 3 cut(s) 50, 356, 765
AlwI GGATC 3 cut(s) 977, 990, 1650
Ama87I CYCGRG 2 cut(s) 1043, 1265
AoxI GGCC 4 cut(s) 274, 947, 1116, 1156
ApeKI GCWGC 3 cut(s) 475, 616, 844
ApoI RAATTY 4 cut(s) 39, 104, 142, 1348
ArsI GACNNNNNNTTYG 2 cut(s) 983, 1015
AseI ATTAAT 1 cut(s) 563
Asp700I GAANNNNTTC 2 cut(s) 884, 1099
AspLEI GCGC 5 cut(s) 206, 309, 331, 409, 483
AspS9I GGNCC 3 cut(s) 947, 1117, 1408
AsuC2I CCSGG 2 cut(s) 444, 689
AvaI CYCGRG 2 cut(s) 1043, 1265
AvaII GGWCC 1 cut(s) 1408
BaeGI GKGCMC 1 cut(s) 1383
BamHI GGATCC 1 cut(s) 982
BanI GGYRCC 2 cut(s) 480, 1378
BanII GRGCYC 3 cut(s) 1266, 1503, 1613
BbsI GAAGAC 1 cut(s) 1454
Bbv12I GWGCWC 3 cut(s) 493, 1266, 1503
BbvI GCAGC 3 cut(s) 462, 603, 831
BccI CCATC 7 cut(s) 67, 369, 386, 413, 506, 832, 994
BceAI ACGGC 3 cut(s) 351, 991, 1264
BciT130I CCWGG 1 cut(s) 744
BciVI GTATCC 2 cut(s) 31, 787
BcnI CCSGG 2 cut(s) 444, 689
BcoDI GTCTC 3 cut(s) 50, 356, 765
BcuI ACTAGT 1 cut(s) 698
BfaI CTAG 6 cut(s) 551, 699, 875, 896, 1308, 1675
BfoI RGCGCY 2 cut(s) 310, 484
BfuI GTATCC 2 cut(s) 31, 787
BglI GCCNNNNNGGC 1 cut(s) 372
BglII AGATCT 1 cut(s) 679
BisI GCNGC 7 cut(s) 228, 476, 479, 484, 617, 845, 1156
BlsI GCNGC 7 cut(s) 229, 477, 480, 485, 618, 846, 1157
Bme1390I CCNGG 3 cut(s) 444, 689, 744
Bme18I GGWCC 1 cut(s) 1408
BmeRI GACNNNNNGTC 1 cut(s) 466
BmeT110I CYCGRG 2 cut(s) 1043, 1265
BmgT120I GGNCC 3 cut(s) 947, 1117, 1408
BmiI GGNNCC 3 cut(s) 482, 984, 1380
BmrFI CCNGG 3 cut(s) 444, 689, 744
BmsI GCATC 1 cut(s) 880
BpiI GAAGAC 1 cut(s) 1454
BplI GAGNNNNNCTC 2 cut(s) 1289, 1321
BpmI CTGGAG 1 cut(s) 32
BpuEI CTTGAG 3 cut(s) 255, 1487, 1613
BpuMI CCSGG 2 cut(s) 444, 689
BsaBI GATNNNNATC 1 cut(s) 798
BsaHI GRCGYC 1 cut(s) 481
BsaI GGTCTC 1 cut(s) 765
BsaJI CCNNGG 7 cut(s) 231, 484, 572, 636, 1280, 1383, 1411
BsaXI ACNNNNNCTCC 6 cut(s) 588, 618, 764, 794, 1446, 1476
Bsc4I CCNNNNNNNGG 4 cut(s) 272, 577, 1126, 1319
Bse1I ACTGG 1 cut(s) 348
Bse3DI GCAATG 1 cut(s) 382
Bse8I GATNNNNATC 1 cut(s) 798
BseBI CCWGG 1 cut(s) 744
BseDI CCNNGG 7 cut(s) 231, 484, 572, 636, 1280, 1383, 1411
BseGI GGATG 2 cut(s) 59, 535
BseJI GATNNNNATC 1 cut(s) 798
BseLI CCNNNNNNNGG 4 cut(s) 272, 577, 1126, 1319
BseMI GCAATG 1 cut(s) 382
BseMII CTCAG 3 cut(s) 132, 369, 1412
BseNI ACTGG 1 cut(s) 348
BseRI GAGGAG 1 cut(s) 1511
BseSI GKGCMC 1 cut(s) 1383
BseXI GCAGC 3 cut(s) 462, 603, 831
Bsh1236I CGCG 2 cut(s) 204, 486
BshFI GGCC 4 cut(s) 276, 949, 1118, 1158
BshNI GGYRCC 2 cut(s) 480, 1378
BsiHKAI GWGCWC 3 cut(s) 493, 1266, 1503
BsiHKCI CYCGRG 2 cut(s) 1043, 1265
BsiSI CCGG 4 cut(s) 212, 444, 688, 902
BslFI GGGAC 3 cut(s) 554, 1043, 1429
BslI CCNNNNNNNGG 4 cut(s) 272, 577, 1126, 1319
BsmAI GTCTC 3 cut(s) 50, 356, 765
BsmFI GGGAC 3 cut(s) 554, 1043, 1429
BsmI GAATGC 2 cut(s) 1426, 1567
BsnI GGCC 4 cut(s) 276, 949, 1118, 1158
Bso31I GGTCTC 1 cut(s) 765
BsoBI CYCGRG 2 cut(s) 1043, 1265
Bsp1286I GDGCHC 5 cut(s) 493, 1266, 1383, 1503, 1613
Bsp143I GATC 5 cut(s) 679, 982, 1009, 1642, 1647
Bsp19I CCATGG 1 cut(s) 231
BspACI CCGC 9 cut(s) 70, 202, 228, 244, 478, 484, 486, 963, 1155
BspANI GGCC 4 cut(s) 276, 949, 1118, 1158
BspCNI CTCAG 3 cut(s) 131, 368, 1411
BspFNI CGCG 2 cut(s) 204, 486
BspLI GGNNCC 3 cut(s) 482, 984, 1380
BspPI GGATC 3 cut(s) 977, 990, 1650
BspQI GCTCTTC 2 cut(s) 1254, 1618
BspT107I GGYRCC 2 cut(s) 480, 1378
BspTNI GGTCTC 1 cut(s) 765
BsrDI GCAATG 1 cut(s) 382
BsrI ACTGG 1 cut(s) 348
BssECI CCNNGG 7 cut(s) 231, 484, 572, 636, 1280, 1383, 1411
BssMI GATC 5 cut(s) 679, 982, 1009, 1642, 1647
BssNAI GTATAC 1 cut(s) 92
BssNI GRCGYC 1 cut(s) 481
BssT1I CCWWGG 3 cut(s) 231, 572, 1411
Bst1107I GTATAC 1 cut(s) 92
Bst2UI CCWGG 1 cut(s) 744
Bst4CI ACNGT 1 cut(s) 640
Bst6I CTCTTC 4 cut(s) 1039, 1254, 1542, 1618
BstACI GRCGYC 1 cut(s) 481
BstC8I GCNNGC 2 cut(s) 614, 633
BstDEI CTNAG 4 cut(s) 118, 355, 1398, 1566
BstDSI CCRYGG 5 cut(s) 231, 484, 636, 1280, 1383
BstF5I GGATG 2 cut(s) 59, 535
BstFNI CGCG 2 cut(s) 204, 486
BstH2I RGCGCY 2 cut(s) 310, 484
BstHHI GCGC 5 cut(s) 206, 309, 331, 409, 483
BstKTI GATC 5 cut(s) 682, 985, 1012, 1645, 1650
BstMAI GTCTC 3 cut(s) 50, 356, 765
BstMBI GATC 5 cut(s) 679, 982, 1009, 1642, 1647
BstMWI GCNNNNNNNGC 6 cut(s) 212, 227, 372, 587, 914, 1592
BstNI CCWGG 1 cut(s) 744
BstNSI RCATGY 2 cut(s) 335, 469
BstSCI CCNGG 3 cut(s) 442, 687, 742
BstSLI GKGCMC 1 cut(s) 1383
BstUI CGCG 2 cut(s) 204, 486
BstV1I GCAGC 3 cut(s) 462, 603, 831
BstV2I GAAGAC 1 cut(s) 1454
BstX2I RGATCY 2 cut(s) 679, 982
BstYI RGATCY 2 cut(s) 679, 982
BstZ17I GTATAC 1 cut(s) 92
BsuI GTATCC 2 cut(s) 31, 787
BsuRI GGCC 4 cut(s) 276, 949, 1118, 1158
BtgI CCRYGG 5 cut(s) 231, 484, 636, 1280, 1383
BtgZI GCGATG 2 cut(s) 347, 1247
BtsCI GGATG 2 cut(s) 59, 535
BtsIMutI CAGTG 1 cut(s) 1406
Cac8I GCNNGC 2 cut(s) 614, 633
CfoI GCGC 5 cut(s) 206, 309, 331, 409, 483
Cfr13I GGNCC 3 cut(s) 947, 1117, 1408
Cfr42I CCGCGG 1 cut(s) 487
CsiI ACCWGGT 1 cut(s) 742
Csp6I GTAC 6 cut(s) 424, 673, 708, 805, 928, 1039
CviAII CATG 6 cut(s) 232, 332, 466, 593, 726, 787
CviQI GTAC 6 cut(s) 424, 673, 708, 805, 928, 1039
DdeI CTNAG 4 cut(s) 118, 355, 1398, 1566
DinI GGCGCC 1 cut(s) 482
DpnI GATC 5 cut(s) 681, 984, 1011, 1644, 1649
DpnII GATC 5 cut(s) 679, 982, 1009, 1642, 1647
DraIII CACNNNGTG 1 cut(s) 1340
DrdI GACNNNNNNGTC 1 cut(s) 512
DriI GACNNNNNGTC 1 cut(s) 466
DseDI GACNNNNNNGTC 1 cut(s) 512
Eam1104I CTCTTC 4 cut(s) 1039, 1254, 1542, 1618
Eam1105I GACNNNNNGTC 1 cut(s) 466
EarI CTCTTC 4 cut(s) 1039, 1254, 1542, 1618
Ecl136II GAGCTC 2 cut(s) 1264, 1501
Eco130I CCWWGG 3 cut(s) 231, 572, 1411
Eco24I GRGCYC 3 cut(s) 1266, 1503, 1613
Eco31I GGTCTC 1 cut(s) 765
Eco47I GGWCC 1 cut(s) 1408
Eco53kI GAGCTC 2 cut(s) 1264, 1501
Eco88I CYCGRG 2 cut(s) 1043, 1265
EcoICRI GAGCTC 2 cut(s) 1264, 1501
EcoRI GAATTC 1 cut(s) 1348
EcoRII CCWGG 1 cut(s) 742
EcoT14I CCWWGG 3 cut(s) 231, 572, 1411
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 3 cut(s) 1266, 1503, 1613
EgeI GGCGCC 1 cut(s) 482
EheI GGCGCC 1 cut(s) 482
ErhI CCWWGG 3 cut(s) 231, 572, 1411
FaeI CATG 6 cut(s) 235, 335, 469, 596, 729, 790
FalI AAGNNNNNCTT 8 cut(s) 917, 949, 1018, 1050, 1496, 1528, 1622, 1654
FaqI GGGAC 3 cut(s) 554, 1043, 1429
FatI CATG 6 cut(s) 231, 331, 465, 592, 725, 786
FblI GTMKAC 3 cut(s) 91, 555, 1191
Fnu4HI GCNGC 7 cut(s) 228, 476, 479, 484, 617, 845, 1156
FokI GGATG 2 cut(s) 46, 522
FriOI GRGCYC 3 cut(s) 1266, 1503, 1613
Fsp4HI GCNGC 7 cut(s) 228, 476, 479, 484, 617, 845, 1156
FspAI RTGCGCAY 1 cut(s) 330
FspBI CTAG 6 cut(s) 551, 699, 875, 896, 1308, 1675
FspI TGCGCA 1 cut(s) 330
GlaI GCGC 5 cut(s) 205, 308, 330, 408, 482
GluI GCNGC 7 cut(s) 228, 476, 479, 484, 617, 845, 1156
GsuI CTGGAG 1 cut(s) 32
HaeII RGCGCY 2 cut(s) 310, 484
HaeIII GGCC 4 cut(s) 276, 949, 1118, 1158
HapII CCGG 4 cut(s) 212, 444, 688, 902
HhaI GCGC 5 cut(s) 206, 309, 331, 409, 483
Hin1I GRCGYC 1 cut(s) 481
Hin1II CATG 6 cut(s) 235, 335, 469, 596, 729, 790
Hin6I GCGC 5 cut(s) 204, 307, 329, 407, 481
HinP1I GCGC 5 cut(s) 204, 307, 329, 407, 481
HincII GTYRAC 1 cut(s) 1192
HindII GTYRAC 1 cut(s) 1192
HinfI GANTC 4 cut(s) 625, 955, 1031, 1624
HpaII CCGG 4 cut(s) 212, 444, 688, 902
Hpy166II GTNNAC 6 cut(s) 92, 556, 749, 880, 1192, 1404
Hpy188I TCNGA 7 cut(s) 418, 472, 867, 991, 1094, 1618, 1647
Hpy188III TCNNGA 4 cut(s) 389, 830, 1267, 1504
Hpy8I GTNNAC 6 cut(s) 92, 556, 749, 880, 1192, 1404
Hpy99I CGWCG 3 cut(s) 431, 434, 461
HpyCH4III ACNGT 1 cut(s) 640
HpyCH4IV ACGT 2 cut(s) 342, 884
HpyCH4V TGCA 4 cut(s) 4, 238, 524, 893
HpyF10VI GCNNNNNNNGC 6 cut(s) 212, 227, 372, 587, 914, 1592
HpyF3I CTNAG 4 cut(s) 118, 355, 1398, 1566
HpySE526I ACGT 2 cut(s) 342, 884
Hsp92I GRCGYC 1 cut(s) 481
Hsp92II CATG 6 cut(s) 235, 335, 469, 596, 729, 790
HspAI GCGC 5 cut(s) 204, 307, 329, 407, 481
KasI GGCGCC 1 cut(s) 480
KspI CCGCGG 1 cut(s) 487
Kzo9I GATC 5 cut(s) 679, 982, 1009, 1642, 1647
LguI GCTCTTC 2 cut(s) 1254, 1618
LmnI GCTCC 4 cut(s) 472, 488, 841, 1498
Lsp1109I GCAGC 3 cut(s) 462, 603, 831
LweI GCATC 1 cut(s) 880
MabI ACCWGGT 1 cut(s) 742
MaeI CTAG 6 cut(s) 551, 699, 875, 896, 1308, 1675
MaeII ACGT 2 cut(s) 342, 884
MaeIII GTNAC 7 cut(s) 256, 334, 343, 446, 1330, 1462, 1486
MalI GATC 5 cut(s) 681, 984, 1011, 1644, 1649
MboI GATC 5 cut(s) 679, 982, 1009, 1642, 1647
MboII GAAGA 6 cut(s) 1026, 1238, 1271, 1459, 1559, 1605
MfeI CAATTG 2 cut(s) 732, 918
MflI RGATCY 2 cut(s) 679, 982
MhlI GDGCHC 5 cut(s) 493, 1266, 1383, 1503, 1613
Mly113I GGCGCC 1 cut(s) 481
MlyI GAGTC 1 cut(s) 1025
MmeI TCCRAC 3 cut(s) 450, 890, 1128
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 2 cut(s) 884, 1099
MseI TTAA 4 cut(s) 438, 563, 666, 911
MslI CAYNNNNRTG 2 cut(s) 875, 1103
MspA1I CMGCKG 1 cut(s) 486
MspI CCGG 4 cut(s) 212, 444, 688, 902
MspR9I CCNGG 3 cut(s) 444, 689, 744
MunI CAATTG 2 cut(s) 732, 918
Mva1269I GAATGC 2 cut(s) 1426, 1567
MvaI CCWGG 1 cut(s) 744
MvnI CGCG 2 cut(s) 204, 486
MwoI GCNNNNNNNGC 6 cut(s) 212, 227, 372, 587, 914, 1592
NarI GGCGCC 1 cut(s) 481
NciI CCSGG 2 cut(s) 444, 689
NcoI CCATGG 1 cut(s) 231
NdeII GATC 5 cut(s) 679, 982, 1009, 1642, 1647
NlaIII CATG 6 cut(s) 235, 335, 469, 596, 729, 790
NlaIV GGNNCC 3 cut(s) 482, 984, 1380
NmeAIII GCCGAG 1 cut(s) 794
NmuCI GTSAC 6 cut(s) 256, 334, 343, 446, 1330, 1462
NsbI TGCGCA 1 cut(s) 330
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 335, 469
PaeR7I CTCGAG 1 cut(s) 1043
PciI ACATGT 1 cut(s) 465
PciSI GCTCTTC 2 cut(s) 1254, 1618
PctI GAATGC 2 cut(s) 1426, 1567
PdmI GAANNNNTTC 2 cut(s) 884, 1099
PfeI GAWTC 3 cut(s) 625, 955, 1624
PfoI TCCNGGA 1 cut(s) 687
PkrI GCNGC 7 cut(s) 229, 477, 480, 485, 618, 846, 1157
PleI GAGTC 1 cut(s) 1025
PluTI GGCGCC 1 cut(s) 484
PpsI GAGTC 1 cut(s) 1025
PscI ACATGT 1 cut(s) 465
PshBI ATTAAT 1 cut(s) 563
Psp124BI GAGCTC 2 cut(s) 1266, 1503
Psp6I CCWGG 1 cut(s) 742
PspGI CCWGG 1 cut(s) 742
PspN4I GGNNCC 3 cut(s) 482, 984, 1380
PspPI GGNCC 3 cut(s) 947, 1117, 1408
PspXI VCTCGAGB 1 cut(s) 1043
PsuI RGATCY 2 cut(s) 679, 982
RsaI GTAC 6 cut(s) 425, 674, 709, 806, 929, 1040
RsaNI GTAC 6 cut(s) 424, 673, 708, 805, 928, 1039
RseI CAYNNNNRTG 2 cut(s) 875, 1103
SacI GAGCTC 2 cut(s) 1266, 1503
SacII CCGCGG 1 cut(s) 487
SalI GTCGAC 1 cut(s) 1190
SapI GCTCTTC 2 cut(s) 1254, 1618
SaqAI TTAA 4 cut(s) 438, 563, 666, 911
SatI GCNGC 7 cut(s) 228, 476, 479, 484, 617, 845, 1156
Sau3AI GATC 5 cut(s) 679, 982, 1009, 1642, 1647
Sau96I GGNCC 3 cut(s) 947, 1117, 1408
SchI GAGTC 1 cut(s) 1025
ScrFI CCNGG 3 cut(s) 444, 689, 744
SduI GDGCHC 5 cut(s) 493, 1266, 1383, 1503, 1613
SexAI ACCWGGT 1 cut(s) 742
SfaNI GCATC 1 cut(s) 880
SfoI GGCGCC 1 cut(s) 482
Sfr274I CTCGAG 1 cut(s) 1043
Sfr303I CCGCGG 1 cut(s) 487
SgrBI CCGCGG 1 cut(s) 487
SinI GGWCC 1 cut(s) 1408
SlaI CTCGAG 1 cut(s) 1043
SmiMI CAYNNNNRTG 2 cut(s) 875, 1103
SmlI CTYRAG 4 cut(s) 270, 1043, 1502, 1628
SmoI CTYRAG 4 cut(s) 270, 1043, 1502, 1628
SpeI ACTAGT 1 cut(s) 698
SsiI CCGC 9 cut(s) 70, 202, 228, 244, 478, 484, 486, 963, 1155
SspDI GGCGCC 1 cut(s) 480
SspMI CTAG 6 cut(s) 551, 699, 875, 896, 1308, 1675
SstI GAGCTC 2 cut(s) 1266, 1503
StyD4I CCNGG 3 cut(s) 442, 687, 742
StyI CCWWGG 3 cut(s) 231, 572, 1411
TaaI ACNGT 1 cut(s) 640
TaiI ACGT 2 cut(s) 345, 887
TaqI TCGA 6 cut(s) 456, 645, 888, 1044, 1058, 1191
TatI WGTACW 1 cut(s) 927
TauI GCSGC 4 cut(s) 230, 481, 486, 1158
TfiI GAWTC 3 cut(s) 625, 955, 1624
Tru1I TTAA 4 cut(s) 438, 563, 666, 911
Tru9I TTAA 4 cut(s) 438, 563, 666, 911
TscAI CASTG 1 cut(s) 1406
TseFI GTSAC 6 cut(s) 256, 334, 343, 446, 1330, 1462
TseI GCWGC 3 cut(s) 475, 616, 844
Tsp45I GTSAC 6 cut(s) 256, 334, 343, 446, 1330, 1462
TspDTI ATGAA 3 cut(s) 609, 775, 1617
TspGWI ACGGA 4 cut(s) 792, 948, 1152, 1421
TspRI CASTG 1 cut(s) 1406
VpaK11BI GGWCC 1 cut(s) 1408
VspI ATTAAT 1 cut(s) 563
XapI RAATTY 4 cut(s) 39, 104, 142, 1348
XceI RCATGY 2 cut(s) 335, 469
XhoI CTCGAG 1 cut(s) 1043
XmiI GTMKAC 3 cut(s) 91, 555, 1191
XmnI GAANNNNTTC 2 cut(s) 884, 1099
XspI CTAG 6 cut(s) 551, 699, 875, 896, 1308, 1675
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.