Rmu_co8207190.1_g000001

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8207190.1
Physical Location & Seq
Reverse (-)
1 .. 510
510 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8207190.1_g000001.1.cds

Sequence Viewer

Length: 501 bp
atgccgtctgctttcttagacgacaaggattcatctgataaatctttcggatgcgatcttttccagaaatcaaaagattccacctacatggaatggctgaattcgaagccggaacagtcggtcgtttacgtctcgtttgggaccgtttccatgctgtccaagattcaaatggaggaaattgcaaaagggttgctggattttggacgtccgtttctgtgggtgattagggaaaaccaaaagaacggagaaggtaaggaaggaaaagaagaagaggagctgagttgtagagaggaactagaagagcttggggtgatagtcccgtggtgtagtcaagtagaggttctctcaaatccttcgttgggttgttttgtgacacattgtggctggaattcaagcttggagagtttagtttgtggggtaccggtggtggcatgtcctcagtggacagatcaatgcactaatgcaaaattgatagaggacacgtggaagacaggggtgagg

Protein Analysis

167

Amino Acids

18.76

Weight (kDa)

4.56

Isoelectric Point (pI)

50.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000585)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15550
fragaria_vesca FvH4_4g13000 FvH4_4g13010 FvH4_4g13020
malus_domestica MD04G1019300.v1.1 MD04G1019400.v1.1 MD04G1019500.v1.1 MD04G1019600.v1.1 MD04G1019700.v1.1
prunus_persica Prupe.1G169100_v2.0.a1 Prupe.1G169200_v2.0.a1 Prupe.1G169300_v2.0.a1
pyrus_communis pycom04g01550 pycom04g01560 pycom04g01580 pycom12g16570
rosa_chinensis RchiOBHm_Chr4g0412431 RchiOBHm_Chr4g0412441 RchiOBHm_Chr4g0412481 RchiOBHm_Chr4g0412491 RchiOBHm_Chr4g0412501 RchiOBHm_Chr4g0412731 RchiOBHm_Chr4g0412741
rosa_laevigata RLG00000008262 RLG00000008264 RLG00000008266 RLG00000008267 RLG00000008285 RLG00000008286 RLG00000008299 RLG00000008300
rosa_multiflora Rmu_co8207190.1_g000001 Rmu_co8436959.1_g000001 Rmu_co8466533.1_g000001 Rmu_sc0001238.1_g000017 Rmu_sc0001238.1_g000019 Rmu_sc0001238.1_g000022 Rmu_sc0001238.1_g000027 Rmu_sc0001238.1_g000036 Rmu_sc0003914.1_g000013 Rmu_sc0005615.1_g000006 Rmu_sc0008191.1_g000017
rosa_roxburghii Rroxscaffold_161G00448030 Rroxscaffold_161G00448050 Rroxscaffold_5G00356580 Rroxscaffold_5G00356640 Rroxscaffold_5G00356700 Rroxscaffold_5G00356890 Rroxscaffold_5G00356930 Rroxscaffold_5G00356960
rosa_rugosa Rorug04G0103500 Rorug04G0103600.1 Rorug04G0103800.1 Rorug04G0103900.1 Rorug04G0116000 Rorug04G0116000 Rorug04G0116000 Rorug04G0116300
rosa_samantha Rh4AG173100 Rh4AG173400 Rh4AG175100 Rh4AG175200 Rh4BG172800 Rh4BG174400 Rh4BG174700 Rh4BG174800 Rh4CG183800 Rh4CG183900 Rh4CG184400 Rh4CG186100 Rh4DG168100 Rh4DG168800 Rh4DG171000 Rh4DG171200 Rh4DG171800 Rh4DG171900
rosa_wichuraiana Rw0G007780 Rw4G014480 Rw4G014670 Rw4G014680 Rw4G014700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 208
Acc65I GGTACC 1 cut(s) 418
AccB1I GGYRCC 1 cut(s) 418
AcsI RAATTY 2 cut(s) 100, 388
AcvI CACGTG 1 cut(s) 483
AcyI GRCGYC 1 cut(s) 205
AdeI CACNNNGTG 1 cut(s) 380
AfaI GTAC 1 cut(s) 420
AfiI CCNNNNNNNGG 1 cut(s) 359
AflIII ACRYGT 1 cut(s) 480
AgeI ACCGGT 1 cut(s) 421
AgsI TTSAA 2 cut(s) 167, 393
AjuI GAANNNNNNNTTGG 2 cut(s) 380, 412
AluBI AGCT 3 cut(s) 277, 304, 396
AluI AGCT 3 cut(s) 277, 304, 396
Alw26I GTCTC 1 cut(s) 136
ApoI RAATTY 2 cut(s) 100, 388
AsiGI ACCGGT 1 cut(s) 421
Asp718I GGTACC 1 cut(s) 418
AspS9I GGNCC 1 cut(s) 141
AsuHPI GGTGA 2 cut(s) 232, 322
AsuII TTCGAA 1 cut(s) 104
AvaII GGWCC 1 cut(s) 141
BanI GGYRCC 1 cut(s) 418
BbrPI CACGTG 1 cut(s) 483
BbsI GAAGAC 1 cut(s) 494
BcoDI GTCTC 1 cut(s) 136
BfaI CTAG 1 cut(s) 296
Bme18I GGWCC 1 cut(s) 141
BmgT120I GGNCC 1 cut(s) 141
BmiI GGNNCC 2 cut(s) 142, 420
BmsI GCATC 1 cut(s) 41
BpiI GAAGAC 1 cut(s) 494
BplI GAGNNNNNCTC 2 cut(s) 329, 361
Bpu14I TTCGAA 1 cut(s) 104
BsaAI YACGTR 1 cut(s) 483
BsaHI GRCGYC 1 cut(s) 205
BsaJI CCNNGG 1 cut(s) 320
BsaWI WCCGGW 1 cut(s) 421
Bsc4I CCNNNNNNNGG 1 cut(s) 359
Bse118I RCCGGY 1 cut(s) 421
BseDI CCNNGG 1 cut(s) 320
BseGI GGATG 1 cut(s) 56
BseLI CCNNNNNNNGG 1 cut(s) 359
BseMII CTCAG 2 cut(s) 269, 452
BseRI GAGGAG 1 cut(s) 287
Bsh1285I CGRYCG 1 cut(s) 123
BshNI GGYRCC 1 cut(s) 418
BshTI ACCGGT 1 cut(s) 421
BsiEI CGRYCG 1 cut(s) 123
BsiSI CCGG 2 cut(s) 110, 422
BslFI GGGAC 2 cut(s) 154, 302
BslI CCNNNNNNNGG 1 cut(s) 359
BsmAI GTCTC 1 cut(s) 136
BsmBI CGTCTC 1 cut(s) 136
BsmFI GGGAC 2 cut(s) 154, 302
Bsp119I TTCGAA 1 cut(s) 104
Bsp143I GATC 2 cut(s) 55, 448
BspCNI CTCAG 2 cut(s) 270, 451
BspLI GGNNCC 2 cut(s) 142, 420
BspQI GCTCTTC 1 cut(s) 294
BspT104I TTCGAA 1 cut(s) 104
BspT107I GGYRCC 1 cut(s) 418
BsrFI RCCGGY 1 cut(s) 421
BssAI RCCGGY 1 cut(s) 421
BssECI CCNNGG 1 cut(s) 320
BssMI GATC 2 cut(s) 55, 448
BssNI GRCGYC 1 cut(s) 205
Bst4CI ACNGT 2 cut(s) 117, 145
Bst6I CTCTTC 2 cut(s) 264, 294
BstACI GRCGYC 1 cut(s) 205
BstBAI YACGTR 1 cut(s) 483
BstBI TTCGAA 1 cut(s) 104
BstDEI CTNAG 3 cut(s) 16, 278, 438
BstDSI CCRYGG 1 cut(s) 320
BstF5I GGATG 1 cut(s) 56
BstKTI GATC 2 cut(s) 58, 451
BstMAI GTCTC 1 cut(s) 136
BstMBI GATC 2 cut(s) 55, 448
BstMCI CGRYCG 1 cut(s) 123
BstNSI RCATGY 1 cut(s) 435
BstV2I GAAGAC 1 cut(s) 494
BstXI CCANNNNNNTGG 1 cut(s) 88
BtgI CCRYGG 1 cut(s) 320
BtsCI GGATG 1 cut(s) 56
BtsIMutI CAGTG 1 cut(s) 446
Cfr10I RCCGGY 1 cut(s) 421
Cfr13I GGNCC 1 cut(s) 141
Csp6I GTAC 1 cut(s) 419
CspAI ACCGGT 1 cut(s) 421
CviAII CATG 3 cut(s) 88, 151, 432
CviJI RGCY 6 cut(s) 97, 109, 277, 304, 384, 396
CviKI_1 RGCY 6 cut(s) 97, 109, 277, 304, 384, 396
CviQI GTAC 1 cut(s) 419
DdeI CTNAG 3 cut(s) 16, 278, 438
DpnI GATC 2 cut(s) 57, 450
DpnII GATC 2 cut(s) 55, 448
DraIII CACNNNGTG 1 cut(s) 380
Eam1104I CTCTTC 2 cut(s) 264, 294
EarI CTCTTC 2 cut(s) 264, 294
Eco47I GGWCC 1 cut(s) 141
Eco72I CACGTG 1 cut(s) 483
EcoRI GAATTC 2 cut(s) 100, 388
Esp3I CGTCTC 1 cut(s) 136
FaeI CATG 3 cut(s) 91, 154, 435
FaiI YATR 3 cut(s) 89, 152, 433
FaqI GGGAC 2 cut(s) 154, 302
FatI CATG 3 cut(s) 87, 150, 431
FokI GGATG 1 cut(s) 63
FspBI CTAG 1 cut(s) 296
HapII CCGG 2 cut(s) 110, 422
Hin1I GRCGYC 1 cut(s) 205
Hin1II CATG 3 cut(s) 91, 154, 435
HindIII AAGCTT 1 cut(s) 394
HinfI GANTC 3 cut(s) 29, 77, 163
HpaII CCGG 2 cut(s) 110, 422
HphI GGTGA 2 cut(s) 232, 322
Hpy166II GTNNAC 2 cut(s) 127, 444
Hpy188I TCNGA 2 cut(s) 37, 50
Hpy188III TCNNGA 1 cut(s) 64
Hpy8I GTNNAC 2 cut(s) 127, 444
HpyAV CCTTC 3 cut(s) 242, 251, 363
HpyCH4III ACNGT 2 cut(s) 117, 145
HpyCH4IV ACGT 3 cut(s) 129, 205, 482
HpyCH4V TGCA 3 cut(s) 182, 456, 464
HpyF3I CTNAG 3 cut(s) 16, 278, 438
HpySE526I ACGT 3 cut(s) 129, 205, 482
Hsp92I GRCGYC 1 cut(s) 205
Hsp92II CATG 3 cut(s) 91, 154, 435
KpnI GGTACC 1 cut(s) 422
Kzo9I GATC 2 cut(s) 55, 448
LguI GCTCTTC 1 cut(s) 294
LmnI GCTCC 1 cut(s) 274
LpnPI CCDG 6 cut(s) 77, 123, 179, 370, 435, 477
LweI GCATC 1 cut(s) 41
MaeI CTAG 1 cut(s) 296
MaeII ACGT 3 cut(s) 129, 205, 482
MaeIII GTNAC 1 cut(s) 370
MalI GATC 2 cut(s) 57, 450
MboI GATC 2 cut(s) 55, 448
MboII GAAGA 4 cut(s) 278, 281, 311, 499
MluCI AATT 4 cut(s) 100, 177, 388, 467
MnlI CCTC 7 cut(s) 166, 265, 283, 331, 447, 469, 492
MslI CAYNNNNRTG 1 cut(s) 86
MspI CCGG 2 cut(s) 110, 422
NdeII GATC 2 cut(s) 55, 448
NlaIII CATG 3 cut(s) 91, 154, 435
NlaIV GGNNCC 2 cut(s) 142, 420
NmuCI GTSAC 1 cut(s) 370
NspI RCATGY 1 cut(s) 435
NspV TTCGAA 1 cut(s) 104
PciSI GCTCTTC 1 cut(s) 294
PfeI GAWTC 3 cut(s) 29, 77, 163
PinAI ACCGGT 1 cut(s) 421
PmaCI CACGTG 1 cut(s) 483
PmlI CACGTG 1 cut(s) 483
Ppu21I YACGTR 1 cut(s) 483
PspCI CACGTG 1 cut(s) 483
PspN4I GGNNCC 2 cut(s) 142, 420
PspPI GGNCC 1 cut(s) 141
RsaI GTAC 1 cut(s) 420
RsaNI GTAC 1 cut(s) 419
RseI CAYNNNNRTG 1 cut(s) 86
SapI GCTCTTC 1 cut(s) 294
Sau3AI GATC 2 cut(s) 55, 448
Sau96I GGNCC 1 cut(s) 141
SetI ASST 9 cut(s) 86, 132, 208, 253, 279, 306, 342, 398, 485
SfaNI GCATC 1 cut(s) 41
SfuI TTCGAA 1 cut(s) 104
SinI GGWCC 1 cut(s) 141
SmiMI CAYNNNNRTG 1 cut(s) 86
Sse9I AATT 4 cut(s) 100, 177, 388, 467
SspMI CTAG 1 cut(s) 296
TaaI ACNGT 2 cut(s) 117, 145
TaiI ACGT 3 cut(s) 132, 208, 485
TaqI TCGA 1 cut(s) 104
TaqII GACCGA 1 cut(s) 109
TasI AATT 4 cut(s) 100, 177, 388, 467
TfiI GAWTC 3 cut(s) 29, 77, 163
TscAI CASTG 1 cut(s) 446
TseFI GTSAC 1 cut(s) 370
Tsp45I GTSAC 1 cut(s) 370
TspDTI ATGAA 1 cut(s) 21
TspGWI ACGGA 2 cut(s) 198, 258
TspRI CASTG 1 cut(s) 446
VpaK11BI GGWCC 1 cut(s) 141
XapI RAATTY 2 cut(s) 100, 388
XceI RCATGY 1 cut(s) 435
XcmI CCANNNNNNNNNTGG 1 cut(s) 166
XspI CTAG 1 cut(s) 296
ZraI GACGTC 1 cut(s) 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.