Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g31990 FvH4_4g31991 |
| prunus_persica | Prupe.1G094800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0404041 RchiOBHm_Chr4g0404051 RchiOBHm_Chr4g0404091 |
| rosa_laevigata | RLG00000008926 RLG00000008930 RLG00000008933 |
| rosa_multiflora | Rmu_co8105392.1_g000001 Rmu_co8272517.1_g000001 Rmu_sc0001999.1_g000001 Rmu_sc0003483.1_g000002 Rmu_sc0006579.1_g000005 Rmu_sc0009977.1_g000001 Rmu_sc0020288.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00348610 |
| rosa_rugosa | Rorug04G0046800 |
| rosa_samantha | Rh4AG121900 Rh4AG122500 Rh4BG115600 Rh4BG115700 Rh4CG130900 Rh4CG131000 Rh4DG115800 |
| rosa_wichuraiana | Rw4G009970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1048 |
| Acc36I | ACCTGC | 1 cut(s) | 1048 |
| AccB1I | GGYRCC | 1 cut(s) | 197 |
| AccII | CGCG | 2 cut(s) | 268, 1373 |
| AciI | CCGC | 1 cut(s) | 213 |
| AclWI | GGATC | 1 cut(s) | 806 |
| AcsI | RAATTY | 3 cut(s) | 14, 460, 958 |
| AcuI | CTGAAG | 2 cut(s) | 632, 816 |
| AfaI | GTAC | 5 cut(s) | 102, 336, 471, 637, 857 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1326, 1375 |
| AgeI | ACCGGT | 1 cut(s) | 1413 |
| AgsI | TTSAA | 5 cut(s) | 739, 897, 958, 1199, 1420 |
| AjnI | CCWGG | 1 cut(s) | 1344 |
| AluBI | AGCT | 8 cut(s) | 62, 366, 478, 616, 981, 1076, 1239, 1454 |
| AluI | AGCT | 8 cut(s) | 62, 366, 478, 616, 981, 1076, 1239, 1454 |
| Alw26I | GTCTC | 2 cut(s) | 1170, 1379 |
| AlwI | GGATC | 1 cut(s) | 806 |
| AoxI | GGCC | 3 cut(s) | 868, 1225, 1317 |
| ApeKI | GCWGC | 4 cut(s) | 397, 564, 1361, 1451 |
| ApoI | RAATTY | 3 cut(s) | 14, 460, 958 |
| AsiGI | ACCGGT | 1 cut(s) | 1413 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 617, 785 |
| AspS9I | GGNCC | 4 cut(s) | 656, 819, 1225, 1349 |
| AsuC2I | CCSGG | 1 cut(s) | 791 |
| AsuHPI | GGTGA | 2 cut(s) | 124, 301 |
| AvaII | GGWCC | 3 cut(s) | 656, 819, 1349 |
| AxyI | CCTNAGG | 1 cut(s) | 534 |
| BanI | GGYRCC | 1 cut(s) | 197 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1060, 1092 |
| BbsI | GAAGAC | 1 cut(s) | 1436 |
| BbvI | GCAGC | 4 cut(s) | 409, 576, 1348, 1463 |
| BccI | CCATC | 5 cut(s) | 100, 209, 971, 1303, 1369 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1100, 1134 |
| BciT130I | CCWGG | 1 cut(s) | 1346 |
| BciVI | GTATCC | 2 cut(s) | 443, 635 |
| BclI | TGATCA | 2 cut(s) | 315, 1027 |
| BcnI | CCSGG | 1 cut(s) | 791 |
| BcoDI | GTCTC | 2 cut(s) | 1170, 1379 |
| BfaI | CTAG | 3 cut(s) | 1062, 1088, 1218 |
| BfmI | CTRYAG | 4 cut(s) | 24, 384, 558, 1449 |
| BfuAI | ACCTGC | 1 cut(s) | 1048 |
| BfuI | GTATCC | 2 cut(s) | 443, 635 |
| BisI | GCNGC | 4 cut(s) | 398, 565, 1362, 1452 |
| BlpI | GCTNAGC | 1 cut(s) | 367 |
| BlsI | GCNGC | 4 cut(s) | 399, 566, 1363, 1453 |
| Bme1390I | CCNGG | 2 cut(s) | 791, 1346 |
| Bme18I | GGWCC | 3 cut(s) | 656, 819, 1349 |
| BmgT120I | GGNCC | 4 cut(s) | 656, 819, 1225, 1349 |
| BmiI | GGNNCC | 3 cut(s) | 199, 703, 1350 |
| BmrFI | CCNGG | 2 cut(s) | 791, 1346 |
| BmrI | ACTGGG | 1 cut(s) | 201 |
| BmsI | GCATC | 4 cut(s) | 10, 574, 1074, 1442 |
| BmuI | ACTGGG | 1 cut(s) | 201 |
| BpiI | GAAGAC | 1 cut(s) | 1436 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1228, 1260 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 367 |
| BpuEI | CTTGAG | 1 cut(s) | 732 |
| BpuMI | CCSGG | 1 cut(s) | 791 |
| BsaJI | CCNNGG | 3 cut(s) | 815, 1133, 1345 |
| BsaWI | WCCGGW | 1 cut(s) | 1413 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1326, 1375 |
| Bse118I | RCCGGY | 1 cut(s) | 1413 |
| Bse1I | ACTGG | 4 cut(s) | 51, 196, 302, 643 |
| Bse21I | CCTNAGG | 1 cut(s) | 534 |
| Bse3DI | GCAATG | 1 cut(s) | 45 |
| BseBI | CCWGG | 1 cut(s) | 1346 |
| BseDI | CCNNGG | 3 cut(s) | 815, 1133, 1345 |
| BseGI | GGATG | 3 cut(s) | 339, 799, 963 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1326, 1375 |
| BseMI | GCAATG | 1 cut(s) | 45 |
| BseMII | CTCAG | 2 cut(s) | 439, 525 |
| BseNI | ACTGG | 4 cut(s) | 51, 196, 302, 643 |
| BseRI | GAGGAG | 3 cut(s) | 518, 551, 1217 |
| BseXI | GCAGC | 4 cut(s) | 409, 576, 1348, 1463 |
| BseYI | CCCAGC | 2 cut(s) | 977, 1331 |
| BsgI | GTGCAG | 1 cut(s) | 1307 |
| Bsh1236I | CGCG | 2 cut(s) | 268, 1373 |
| BshFI | GGCC | 3 cut(s) | 870, 1227, 1319 |
| BshNI | GGYRCC | 1 cut(s) | 197 |
| BshTI | ACCGGT | 1 cut(s) | 1413 |
| BsiSI | CCGG | 2 cut(s) | 791, 1414 |
| BslFI | GGGAC | 1 cut(s) | 1362 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1326, 1375 |
| BsmAI | GTCTC | 2 cut(s) | 1170, 1379 |
| BsmFI | GGGAC | 1 cut(s) | 1362 |
| BsmI | GAATGC | 2 cut(s) | 1106, 1435 |
| BsnI | GGCC | 3 cut(s) | 870, 1227, 1319 |
| Bsp1407I | TGTACA | 1 cut(s) | 855 |
| Bsp143I | GATC | 6 cut(s) | 315, 751, 811, 1027, 1293, 1471 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 367 |
| Bsp68I | TCGCGA | 2 cut(s) | 268, 1373 |
| BspACI | CCGC | 1 cut(s) | 213 |
| BspANI | GGCC | 3 cut(s) | 870, 1227, 1319 |
| BspCNI | CTCAG | 2 cut(s) | 438, 526 |
| BspFNI | CGCG | 2 cut(s) | 268, 1373 |
| BspHI | TCATGA | 1 cut(s) | 754 |
| BspLI | GGNNCC | 3 cut(s) | 199, 703, 1350 |
| BspMAI | CTGCAG | 1 cut(s) | 1453 |
| BspMI | ACCTGC | 1 cut(s) | 1048 |
| BspPI | GGATC | 1 cut(s) | 806 |
| BspQI | GCTCTTC | 1 cut(s) | 623 |
| BspT107I | GGYRCC | 1 cut(s) | 197 |
| BsrDI | GCAATG | 1 cut(s) | 45 |
| BsrFI | RCCGGY | 1 cut(s) | 1413 |
| BsrGI | TGTACA | 1 cut(s) | 855 |
| BsrI | ACTGG | 4 cut(s) | 51, 196, 302, 643 |
| BssAI | RCCGGY | 1 cut(s) | 1413 |
| BssECI | CCNNGG | 3 cut(s) | 815, 1133, 1345 |
| BssMI | GATC | 6 cut(s) | 315, 751, 811, 1027, 1293, 1471 |
| Bst2UI | CCWGG | 1 cut(s) | 1346 |
| Bst4CI | ACNGT | 3 cut(s) | 385, 952, 1407 |
| Bst6I | CTCTTC | 5 cut(s) | 623, 835, 878, 1194, 1251 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1058 |
| BstAUI | TGTACA | 1 cut(s) | 855 |
| BstC8I | GCNNGC | 4 cut(s) | 364, 402, 868, 1241 |
| BstDEI | CTNAG | 6 cut(s) | 167, 367, 425, 534, 848, 1274 |
| BstF5I | GGATG | 3 cut(s) | 339, 799, 963 |
| BstFNI | CGCG | 2 cut(s) | 268, 1373 |
| BstKTI | GATC | 6 cut(s) | 318, 754, 814, 1030, 1296, 1474 |
| BstMAI | GTCTC | 2 cut(s) | 1170, 1379 |
| BstMBI | GATC | 6 cut(s) | 315, 751, 811, 1027, 1293, 1471 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 368, 1049, 1058, 1370, 1460 |
| BstNI | CCWGG | 1 cut(s) | 1346 |
| BstSCI | CCNGG | 2 cut(s) | 789, 1344 |
| BstSFI | CTRYAG | 4 cut(s) | 24, 384, 558, 1449 |
| BstUI | CGCG | 2 cut(s) | 268, 1373 |
| BstV1I | GCAGC | 4 cut(s) | 409, 576, 1348, 1463 |
| BstV2I | GAAGAC | 1 cut(s) | 1436 |
| BstX2I | RGATCY | 1 cut(s) | 811 |
| BstYI | RGATCY | 1 cut(s) | 811 |
| Bsu36I | CCTNAGG | 1 cut(s) | 534 |
| BsuI | GTATCC | 2 cut(s) | 443, 635 |
| BsuRI | GGCC | 3 cut(s) | 870, 1227, 1319 |
| BtgZI | GCGATG | 1 cut(s) | 1388 |
| BtsCI | GGATG | 3 cut(s) | 339, 799, 963 |
| BtsI | GCAGTG | 3 cut(s) | 357, 374, 1308 |
| BtsIMutI | CAGTG | 3 cut(s) | 357, 374, 1308 |
| BtuMI | TCGCGA | 2 cut(s) | 268, 1373 |
| BveI | ACCTGC | 1 cut(s) | 1048 |
| Cac8I | GCNNGC | 4 cut(s) | 364, 402, 868, 1241 |
| CciI | TCATGA | 1 cut(s) | 754 |
| Cfr10I | RCCGGY | 1 cut(s) | 1413 |
| Cfr13I | GGNCC | 4 cut(s) | 656, 819, 1225, 1349 |
| Csp6I | GTAC | 5 cut(s) | 101, 335, 470, 636, 856 |
| CspAI | ACCGGT | 1 cut(s) | 1413 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 556, 591 |
| CviAII | CATG | 5 cut(s) | 755, 906, 968, 1229, 1297 |
| CviQI | GTAC | 5 cut(s) | 101, 335, 470, 636, 856 |
| DdeI | CTNAG | 6 cut(s) | 167, 367, 425, 534, 848, 1274 |
| DpnI | GATC | 6 cut(s) | 317, 753, 813, 1029, 1295, 1473 |
| DpnII | GATC | 6 cut(s) | 315, 751, 811, 1027, 1293, 1471 |
| Eam1104I | CTCTTC | 5 cut(s) | 623, 835, 878, 1194, 1251 |
| EarI | CTCTTC | 5 cut(s) | 623, 835, 878, 1194, 1251 |
| Eco147I | AGGCCT | 1 cut(s) | 870 |
| Eco47I | GGWCC | 3 cut(s) | 656, 819, 1349 |
| Eco57I | CTGAAG | 2 cut(s) | 632, 816 |
| Eco81I | CCTNAGG | 1 cut(s) | 534 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1349 |
| EcoRI | GAATTC | 2 cut(s) | 460, 958 |
| EcoRII | CCWGG | 1 cut(s) | 1344 |
| EcoT22I | ATGCAT | 2 cut(s) | 1164, 1435 |
| FaeI | CATG | 5 cut(s) | 758, 909, 971, 1232, 1300 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 449, 481 |
| FaqI | GGGAC | 1 cut(s) | 1362 |
| FatI | CATG | 5 cut(s) | 754, 905, 967, 1228, 1296 |
| FauNDI | CATATG | 1 cut(s) | 320 |
| FbaI | TGATCA | 2 cut(s) | 315, 1027 |
| Fnu4HI | GCNGC | 4 cut(s) | 398, 565, 1362, 1452 |
| FokI | GGATG | 3 cut(s) | 326, 806, 950 |
| Fsp4HI | GCNGC | 4 cut(s) | 398, 565, 1362, 1452 |
| FspBI | CTAG | 3 cut(s) | 1062, 1088, 1218 |
| GluI | GCNGC | 4 cut(s) | 398, 565, 1362, 1452 |
| GsaI | CCCAGC | 2 cut(s) | 981, 1335 |
| HaeIII | GGCC | 3 cut(s) | 870, 1227, 1319 |
| HapII | CCGG | 2 cut(s) | 791, 1414 |
| Hin1II | CATG | 5 cut(s) | 758, 909, 971, 1232, 1300 |
| HincII | GTYRAC | 1 cut(s) | 186 |
| HindII | GTYRAC | 1 cut(s) | 186 |
| HindIII | AAGCTT | 1 cut(s) | 1074 |
| HinfI | GANTC | 4 cut(s) | 92, 797, 1091, 1178 |
| HpaII | CCGG | 2 cut(s) | 791, 1414 |
| HphI | GGTGA | 2 cut(s) | 124, 301 |
| Hpy166II | GTNNAC | 4 cut(s) | 186, 822, 856, 948 |
| Hpy188I | TCNGA | 5 cut(s) | 91, 260, 428, 816, 835 |
| Hpy8I | GTNNAC | 4 cut(s) | 186, 822, 856, 948 |
| HpyAV | CCTTC | 3 cut(s) | 109, 700, 1362 |
| HpyCH4III | ACNGT | 3 cut(s) | 385, 952, 1407 |
| HpyCH4IV | ACGT | 3 cut(s) | 430, 444, 720 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 368, 1049, 1058, 1370, 1460 |
| HpyF3I | CTNAG | 6 cut(s) | 167, 367, 425, 534, 848, 1274 |
| HpySE526I | ACGT | 3 cut(s) | 430, 444, 720 |
| Hsp92II | CATG | 5 cut(s) | 758, 909, 971, 1232, 1300 |
| Ksp22I | TGATCA | 2 cut(s) | 315, 1027 |
| Kzo9I | GATC | 6 cut(s) | 315, 751, 811, 1027, 1293, 1471 |
| LguI | GCTCTTC | 1 cut(s) | 623 |
| LmnI | GCTCC | 2 cut(s) | 707, 1204 |
| Lsp1109I | GCAGC | 4 cut(s) | 409, 576, 1348, 1463 |
| LweI | GCATC | 4 cut(s) | 10, 574, 1074, 1442 |
| MaeI | CTAG | 3 cut(s) | 1062, 1088, 1218 |
| MaeII | ACGT | 3 cut(s) | 430, 444, 720 |
| MaeIII | GTNAC | 2 cut(s) | 353, 742 |
| MalI | GATC | 6 cut(s) | 317, 753, 813, 1029, 1295, 1473 |
| MboI | GATC | 6 cut(s) | 315, 751, 811, 1027, 1293, 1471 |
| MboII | GAAGA | 9 cut(s) | 610, 822, 865, 894, 1201, 1204, 1211, 1238, 1436 |
| MflI | RGATCY | 1 cut(s) | 811 |
| MluCI | AATT | 7 cut(s) | 14, 460, 491, 781, 897, 958, 1268 |
| MlyI | GAGTC | 2 cut(s) | 1100, 1172 |
| MmeI | TCCRAC | 2 cut(s) | 427, 634 |
| Mph1103I | ATGCAT | 2 cut(s) | 1164, 1435 |
| MroXI | GAANNNNTTC | 2 cut(s) | 617, 785 |
| MseI | TTAA | 5 cut(s) | 123, 482, 494, 1340, 1409 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1167, 1301 |
| MspA1I | CMGCKG | 1 cut(s) | 215 |
| MspI | CCGG | 2 cut(s) | 791, 1414 |
| MspR9I | CCNGG | 2 cut(s) | 791, 1346 |
| Mva1269I | GAATGC | 2 cut(s) | 1106, 1435 |
| MvaI | CCWGG | 1 cut(s) | 1346 |
| MvnI | CGCG | 2 cut(s) | 268, 1373 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 368, 1049, 1058, 1370, 1460 |
| NciI | CCSGG | 1 cut(s) | 791 |
| NdeI | CATATG | 1 cut(s) | 320 |
| NdeII | GATC | 6 cut(s) | 315, 751, 811, 1027, 1293, 1471 |
| NlaIII | CATG | 5 cut(s) | 758, 909, 971, 1232, 1300 |
| NlaIV | GGNNCC | 3 cut(s) | 199, 703, 1350 |
| NruI | TCGCGA | 2 cut(s) | 268, 1373 |
| NsiI | ATGCAT | 2 cut(s) | 1164, 1435 |
| PagI | TCATGA | 1 cut(s) | 754 |
| PaqCI | CACCTGC | 1 cut(s) | 1048 |
| PceI | AGGCCT | 1 cut(s) | 870 |
| PciSI | GCTCTTC | 1 cut(s) | 623 |
| PctI | GAATGC | 2 cut(s) | 1106, 1435 |
| PdmI | GAANNNNTTC | 2 cut(s) | 617, 785 |
| PfeI | GAWTC | 2 cut(s) | 92, 797 |
| PfoI | TCCNGGA | 1 cut(s) | 789 |
| PinAI | ACCGGT | 1 cut(s) | 1413 |
| PkrI | GCNGC | 4 cut(s) | 399, 566, 1363, 1453 |
| PleI | GAGTC | 2 cut(s) | 1099, 1172 |
| PpsI | GAGTC | 2 cut(s) | 1099, 1172 |
| PpuMI | RGGWCCY | 1 cut(s) | 1349 |
| Psp5II | RGGWCCY | 1 cut(s) | 1349 |
| Psp6I | CCWGG | 1 cut(s) | 1344 |
| PspFI | CCCAGC | 2 cut(s) | 977, 1331 |
| PspGI | CCWGG | 1 cut(s) | 1344 |
| PspN4I | GGNNCC | 3 cut(s) | 199, 703, 1350 |
| PspPI | GGNCC | 4 cut(s) | 656, 819, 1225, 1349 |
| PspPPI | RGGWCCY | 1 cut(s) | 1349 |
| PstI | CTGCAG | 1 cut(s) | 1453 |
| PsuI | RGATCY | 1 cut(s) | 811 |
| RruI | TCGCGA | 2 cut(s) | 268, 1373 |
| RsaI | GTAC | 5 cut(s) | 102, 336, 471, 637, 857 |
| RsaNI | GTAC | 5 cut(s) | 101, 335, 470, 636, 856 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1167, 1301 |
| SapI | GCTCTTC | 1 cut(s) | 623 |
| SaqAI | TTAA | 5 cut(s) | 123, 482, 494, 1340, 1409 |
| SatI | GCNGC | 4 cut(s) | 398, 565, 1362, 1452 |
| Sau3AI | GATC | 6 cut(s) | 315, 751, 811, 1027, 1293, 1471 |
| Sau96I | GGNCC | 4 cut(s) | 656, 819, 1225, 1349 |
| SchI | GAGTC | 2 cut(s) | 1100, 1172 |
| ScrFI | CCNGG | 2 cut(s) | 791, 1346 |
| SfaNI | GCATC | 4 cut(s) | 10, 574, 1074, 1442 |
| SfcI | CTRYAG | 4 cut(s) | 24, 384, 558, 1449 |
| SinI | GGWCC | 3 cut(s) | 656, 819, 1349 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1167, 1301 |
| SmlI | CTYRAG | 1 cut(s) | 747 |
| SmoI | CTYRAG | 1 cut(s) | 747 |
| Sse9I | AATT | 7 cut(s) | 14, 460, 491, 781, 897, 958, 1268 |
| SseBI | AGGCCT | 1 cut(s) | 870 |
| SsiI | CCGC | 1 cut(s) | 213 |
| SspMI | CTAG | 3 cut(s) | 1062, 1088, 1218 |
| StuI | AGGCCT | 1 cut(s) | 870 |
| StyD4I | CCNGG | 2 cut(s) | 789, 1344 |
| TaaI | ACNGT | 3 cut(s) | 385, 952, 1407 |
| TaiI | ACGT | 3 cut(s) | 433, 447, 723 |
| TaqI | TCGA | 4 cut(s) | 252, 725, 1110, 1181 |
| TasI | AATT | 7 cut(s) | 14, 460, 491, 781, 897, 958, 1268 |
| TatI | WGTACW | 2 cut(s) | 635, 855 |
| TfiI | GAWTC | 2 cut(s) | 92, 797 |
| Tru1I | TTAA | 5 cut(s) | 123, 482, 494, 1340, 1409 |
| Tru9I | TTAA | 5 cut(s) | 123, 482, 494, 1340, 1409 |
| TscAI | CASTG | 3 cut(s) | 364, 381, 1308 |
| TseI | GCWGC | 4 cut(s) | 397, 564, 1361, 1451 |
| TspGWI | ACGGA | 2 cut(s) | 690, 793 |
| TspRI | CASTG | 3 cut(s) | 364, 381, 1308 |
| VpaK11BI | GGWCC | 3 cut(s) | 656, 819, 1349 |
| XapI | RAATTY | 3 cut(s) | 14, 460, 958 |
| XmnI | GAANNNNTTC | 2 cut(s) | 617, 785 |
| XspI | CTAG | 3 cut(s) | 1062, 1088, 1218 |
| Zsp2I | ATGCAT | 2 cut(s) | 1164, 1435 |