Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g31990 FvH4_4g31991 |
| prunus_persica | Prupe.1G094800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0404041 RchiOBHm_Chr4g0404051 RchiOBHm_Chr4g0404091 |
| rosa_laevigata | RLG00000008926 RLG00000008930 RLG00000008933 |
| rosa_multiflora | Rmu_co8105392.1_g000001 Rmu_co8272517.1_g000001 Rmu_sc0001999.1_g000001 Rmu_sc0003483.1_g000002 Rmu_sc0006579.1_g000005 Rmu_sc0009977.1_g000001 Rmu_sc0020288.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00348610 |
| rosa_rugosa | Rorug04G0046800 |
| rosa_samantha | Rh4AG121900 Rh4AG122500 Rh4BG115600 Rh4BG115700 Rh4CG130900 Rh4CG131000 Rh4DG115800 |
| rosa_wichuraiana | Rw4G009970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 120 |
| AcsI | RAATTY | 4 cut(s) | 37, 44, 51, 319 |
| AcuI | CTGAAG | 1 cut(s) | 180 |
| AfaI | GTAC | 1 cut(s) | 221 |
| AgsI | TTSAA | 5 cut(s) | 29, 37, 44, 90, 319 |
| AleI | CACNNNNGTG | 1 cut(s) | 251 |
| AoxI | GGCC | 2 cut(s) | 232, 308 |
| ApoI | RAATTY | 4 cut(s) | 37, 44, 51, 319 |
| AsuII | TTCGAA | 1 cut(s) | 49 |
| BanII | GRGCYC | 1 cut(s) | 13 |
| BccI | CCATC | 2 cut(s) | 332, 336 |
| BfaI | CTAG | 1 cut(s) | 207 |
| BoxI | GACNNNNGTC | 1 cut(s) | 180 |
| Bpu14I | TTCGAA | 1 cut(s) | 49 |
| BpuEI | CTTGAG | 1 cut(s) | 96 |
| Bse1I | ACTGG | 1 cut(s) | 311 |
| BseGI | GGATG | 1 cut(s) | 324 |
| BseNI | ACTGG | 1 cut(s) | 311 |
| BshFI | GGCC | 2 cut(s) | 234, 310 |
| BslFI | GGGAC | 1 cut(s) | 168 |
| BsmFI | GGGAC | 1 cut(s) | 168 |
| BsnI | GGCC | 2 cut(s) | 234, 310 |
| Bsp119I | TTCGAA | 1 cut(s) | 49 |
| Bsp1286I | GDGCHC | 1 cut(s) | 13 |
| Bsp1407I | TGTACA | 1 cut(s) | 219 |
| BspANI | GGCC | 2 cut(s) | 234, 310 |
| BspT104I | TTCGAA | 1 cut(s) | 49 |
| BsrGI | TGTACA | 1 cut(s) | 219 |
| BsrI | ACTGG | 1 cut(s) | 311 |
| Bst4CI | ACNGT | 1 cut(s) | 253 |
| Bst6I | CTCTTC | 2 cut(s) | 199, 242 |
| BstAUI | TGTACA | 1 cut(s) | 219 |
| BstBI | TTCGAA | 1 cut(s) | 49 |
| BstC8I | GCNNGC | 2 cut(s) | 64, 312 |
| BstDEI | CTNAG | 1 cut(s) | 212 |
| BstF5I | GGATG | 1 cut(s) | 324 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 180 |
| BsuRI | GGCC | 2 cut(s) | 234, 310 |
| BtsCI | GGATG | 1 cut(s) | 324 |
| BtsIMutI | CAGTG | 1 cut(s) | 258 |
| Cac8I | GCNNGC | 2 cut(s) | 64, 312 |
| CseI | GACGC | 1 cut(s) | 185 |
| Csp6I | GTAC | 1 cut(s) | 220 |
| CviAII | CATG | 2 cut(s) | 83, 270 |
| CviJI | RGCY | 6 cut(s) | 11, 22, 66, 234, 310, 338 |
| CviKI_1 | RGCY | 6 cut(s) | 11, 22, 66, 234, 310, 338 |
| CviQI | GTAC | 1 cut(s) | 220 |
| DdeI | CTNAG | 1 cut(s) | 212 |
| Eam1104I | CTCTTC | 2 cut(s) | 199, 242 |
| EarI | CTCTTC | 2 cut(s) | 199, 242 |
| Eco147I | AGGCCT | 1 cut(s) | 234 |
| Eco24I | GRGCYC | 1 cut(s) | 13 |
| Eco57I | CTGAAG | 1 cut(s) | 180 |
| EcoRI | GAATTC | 1 cut(s) | 319 |
| EcoT38I | GRGCYC | 1 cut(s) | 13 |
| FaeI | CATG | 2 cut(s) | 86, 273 |
| FaiI | YATR | 5 cut(s) | 84, 120, 271, 282, 284 |
| FaqI | GGGAC | 1 cut(s) | 168 |
| FatI | CATG | 2 cut(s) | 82, 269 |
| FokI | GGATG | 1 cut(s) | 311 |
| FriOI | GRGCYC | 1 cut(s) | 13 |
| FspBI | CTAG | 1 cut(s) | 207 |
| HaeIII | GGCC | 2 cut(s) | 234, 310 |
| HgaI | GACGC | 1 cut(s) | 185 |
| Hin1II | CATG | 2 cut(s) | 86, 273 |
| HinfI | GANTC | 1 cut(s) | 109 |
| Hpy166II | GTNNAC | 2 cut(s) | 220, 222 |
| Hpy188I | TCNGA | 2 cut(s) | 199, 230 |
| Hpy188III | TCNNGA | 5 cut(s) | 100, 113, 155, 173, 332 |
| Hpy8I | GTNNAC | 2 cut(s) | 220, 222 |
| HpyCH4III | ACNGT | 1 cut(s) | 253 |
| HpyCH4V | TGCA | 1 cut(s) | 139 |
| HpyF3I | CTNAG | 1 cut(s) | 212 |
| Hsp92II | CATG | 2 cut(s) | 86, 273 |
| LmnI | GCTCC | 1 cut(s) | 59 |
| LpnPI | CCDG | 5 cut(s) | 48, 113, 168, 292, 324 |
| MaeI | CTAG | 1 cut(s) | 207 |
| MaeIII | GTNAC | 1 cut(s) | 106 |
| MboII | GAAGA | 3 cut(s) | 186, 229, 258 |
| MhlI | GDGCHC | 1 cut(s) | 13 |
| MluCI | AATT | 7 cut(s) | 37, 44, 51, 145, 202, 319, 353 |
| MlyI | GAGTC | 1 cut(s) | 103 |
| MnlI | CCTC | 4 cut(s) | 224, 245, 305, 349 |
| MslI | CAYNNNNRTG | 1 cut(s) | 251 |
| NlaIII | CATG | 2 cut(s) | 86, 273 |
| NmuCI | GTSAC | 1 cut(s) | 106 |
| NspV | TTCGAA | 1 cut(s) | 49 |
| OliI | CACNNNNGTG | 1 cut(s) | 251 |
| PceI | AGGCCT | 1 cut(s) | 234 |
| PleI | GAGTC | 1 cut(s) | 103 |
| PpsI | GAGTC | 1 cut(s) | 103 |
| PshAI | GACNNNNGTC | 1 cut(s) | 180 |
| PsiI | TTATAA | 1 cut(s) | 120 |
| RsaI | GTAC | 1 cut(s) | 221 |
| RsaNI | GTAC | 1 cut(s) | 220 |
| RseI | CAYNNNNRTG | 1 cut(s) | 251 |
| SchI | GAGTC | 1 cut(s) | 103 |
| SduI | GDGCHC | 1 cut(s) | 13 |
| SfuI | TTCGAA | 1 cut(s) | 49 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 251 |
| SmlI | CTYRAG | 1 cut(s) | 111 |
| SmoI | CTYRAG | 1 cut(s) | 111 |
| Sse9I | AATT | 7 cut(s) | 37, 44, 51, 145, 202, 319, 353 |
| SseBI | AGGCCT | 1 cut(s) | 234 |
| SspMI | CTAG | 1 cut(s) | 207 |
| StuI | AGGCCT | 1 cut(s) | 234 |
| TaaI | ACNGT | 1 cut(s) | 253 |
| TaqI | TCGA | 3 cut(s) | 49, 260, 331 |
| TasI | AATT | 7 cut(s) | 37, 44, 51, 145, 202, 319, 353 |
| TatI | WGTACW | 1 cut(s) | 219 |
| TscAI | CASTG | 1 cut(s) | 258 |
| TseFI | GTSAC | 1 cut(s) | 106 |
| Tsp45I | GTSAC | 1 cut(s) | 106 |
| TspDTI | ATGAA | 4 cut(s) | 17, 174, 229, 258 |
| TspRI | CASTG | 1 cut(s) | 258 |
| XapI | RAATTY | 4 cut(s) | 37, 44, 51, 319 |
| XspI | CTAG | 1 cut(s) | 207 |