Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g31990 FvH4_4g31991 |
| prunus_persica | Prupe.1G094800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0404041 RchiOBHm_Chr4g0404051 RchiOBHm_Chr4g0404091 |
| rosa_laevigata | RLG00000008926 RLG00000008930 RLG00000008933 |
| rosa_multiflora | Rmu_co8105392.1_g000001 Rmu_co8272517.1_g000001 Rmu_sc0001999.1_g000001 Rmu_sc0003483.1_g000002 Rmu_sc0006579.1_g000005 Rmu_sc0009977.1_g000001 Rmu_sc0020288.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00348610 |
| rosa_rugosa | Rorug04G0046800 |
| rosa_samantha | Rh4AG121900 Rh4AG122500 Rh4BG115600 Rh4BG115700 Rh4CG130900 Rh4CG131000 Rh4DG115800 |
| rosa_wichuraiana | Rw4G009970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 253 |
| AclWI | GGATC | 1 cut(s) | 359 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 290 |
| AgsI | TTSAA | 1 cut(s) | 386 |
| AjnI | CCWGG | 1 cut(s) | 170 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 383 |
| AluBI | AGCT | 2 cut(s) | 26, 232 |
| AluI | AGCT | 2 cut(s) | 26, 232 |
| Alw21I | GWGCWC | 1 cut(s) | 276 |
| Alw44I | GTGCAC | 1 cut(s) | 272 |
| AlwI | GGATC | 1 cut(s) | 359 |
| ApaLI | GTGCAC | 1 cut(s) | 272 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 8 |
| BaeGI | GKGCMC | 1 cut(s) | 276 |
| BbsI | GAAGAC | 1 cut(s) | 114 |
| Bbv12I | GWGCWC | 1 cut(s) | 276 |
| BccI | CCATC | 3 cut(s) | 62, 208, 356 |
| BciT130I | CCWGG | 1 cut(s) | 172 |
| Bme1390I | CCNGG | 1 cut(s) | 172 |
| BmiI | GGNNCC | 1 cut(s) | 177 |
| BmrFI | CCNGG | 1 cut(s) | 172 |
| BmsI | GCATC | 1 cut(s) | 139 |
| BpiI | GAAGAC | 1 cut(s) | 114 |
| BpuEI | CTTGAG | 1 cut(s) | 27 |
| BsaJI | CCNNGG | 2 cut(s) | 170, 171 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 290 |
| Bse1I | ACTGG | 1 cut(s) | 207 |
| BseBI | CCWGG | 1 cut(s) | 172 |
| BseDI | CCNNGG | 2 cut(s) | 170, 171 |
| BseGI | GGATG | 3 cut(s) | 37, 59, 203 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 290 |
| BseNI | ACTGG | 1 cut(s) | 207 |
| BseSI | GKGCMC | 1 cut(s) | 276 |
| BsgI | GTGCAG | 1 cut(s) | 342 |
| BsiHKAI | GWGCWC | 1 cut(s) | 276 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 1 cut(s) | 276 |
| Bsp143I | GATC | 1 cut(s) | 351 |
| BspACI | CCGC | 1 cut(s) | 253 |
| BspLI | GGNNCC | 1 cut(s) | 177 |
| BspPI | GGATC | 1 cut(s) | 359 |
| BsrI | ACTGG | 1 cut(s) | 207 |
| BssECI | CCNNGG | 2 cut(s) | 170, 171 |
| BssMI | GATC | 1 cut(s) | 351 |
| Bst2UI | CCWGG | 1 cut(s) | 172 |
| Bst4CI | ACNGT | 1 cut(s) | 8 |
| Bst6I | CTCTTC | 1 cut(s) | 43 |
| BstC8I | GCNNGC | 2 cut(s) | 87, 325 |
| BstF5I | GGATG | 3 cut(s) | 37, 59, 203 |
| BstKTI | GATC | 1 cut(s) | 354 |
| BstMBI | GATC | 1 cut(s) | 351 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 320 |
| BstNI | CCWGG | 1 cut(s) | 172 |
| BstNSI | RCATGY | 1 cut(s) | 89 |
| BstSCI | CCNGG | 1 cut(s) | 170 |
| BstSLI | GKGCMC | 1 cut(s) | 276 |
| BstV2I | GAAGAC | 1 cut(s) | 114 |
| BtsCI | GGATG | 3 cut(s) | 37, 59, 203 |
| Cac8I | GCNNGC | 2 cut(s) | 87, 325 |
| CviAII | CATG | 3 cut(s) | 86, 277, 328 |
| CviJI | RGCY | 3 cut(s) | 26, 53, 232 |
| CviKI_1 | RGCY | 3 cut(s) | 26, 53, 232 |
| DpnI | GATC | 1 cut(s) | 353 |
| DpnII | GATC | 1 cut(s) | 351 |
| Eam1104I | CTCTTC | 1 cut(s) | 43 |
| EarI | CTCTTC | 1 cut(s) | 43 |
| EcoRII | CCWGG | 1 cut(s) | 170 |
| FaeI | CATG | 3 cut(s) | 89, 280, 331 |
| FatI | CATG | 3 cut(s) | 85, 276, 327 |
| FauNDI | CATATG | 1 cut(s) | 76 |
| FokI | GGATG | 3 cut(s) | 44, 46, 190 |
| Hin1II | CATG | 3 cut(s) | 89, 280, 331 |
| HindIII | AAGCTT | 1 cut(s) | 230 |
| HinfI | GANTC | 4 cut(s) | 35, 133, 280, 382 |
| Hpy166II | GTNNAC | 1 cut(s) | 274 |
| Hpy188III | TCNNGA | 2 cut(s) | 19, 29 |
| Hpy8I | GTNNAC | 1 cut(s) | 274 |
| HpyAV | CCTTC | 3 cut(s) | 294, 332, 385 |
| HpyCH4III | ACNGT | 1 cut(s) | 8 |
| HpyCH4V | TGCA | 3 cut(s) | 89, 274, 323 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 320 |
| Hsp92II | CATG | 3 cut(s) | 89, 280, 331 |
| Kzo9I | GATC | 1 cut(s) | 351 |
| LpnPI | CCDG | 6 cut(s) | 4, 14, 157, 184, 220, 309 |
| LweI | GCATC | 1 cut(s) | 139 |
| MalI | GATC | 1 cut(s) | 353 |
| MboI | GATC | 1 cut(s) | 351 |
| MboII | GAAGA | 3 cut(s) | 4, 30, 119 |
| MhlI | GDGCHC | 1 cut(s) | 276 |
| MluCI | AATT | 2 cut(s) | 144, 162 |
| MlyI | GAGTC | 2 cut(s) | 29, 274 |
| MnlI | CCTC | 1 cut(s) | 252 |
| MroXI | GAANNNNTTC | 1 cut(s) | 8 |
| MseI | TTAA | 3 cut(s) | 69, 215, 242 |
| MslI | CAYNNNNRTG | 2 cut(s) | 79, 102 |
| MspR9I | CCNGG | 1 cut(s) | 172 |
| MvaI | CCWGG | 1 cut(s) | 172 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 320 |
| NdeI | CATATG | 1 cut(s) | 76 |
| NdeII | GATC | 1 cut(s) | 351 |
| NlaIII | CATG | 3 cut(s) | 89, 280, 331 |
| NlaIV | GGNNCC | 1 cut(s) | 177 |
| NspI | RCATGY | 1 cut(s) | 89 |
| PaeI | GCATGC | 1 cut(s) | 89 |
| PasI | CCCWGGG | 1 cut(s) | 171 |
| PdmI | GAANNNNTTC | 1 cut(s) | 8 |
| PfeI | GAWTC | 2 cut(s) | 133, 382 |
| PleI | GAGTC | 2 cut(s) | 29, 274 |
| PpsI | GAGTC | 2 cut(s) | 29, 274 |
| Psp6I | CCWGG | 1 cut(s) | 170 |
| PspGI | CCWGG | 1 cut(s) | 170 |
| PspN4I | GGNNCC | 1 cut(s) | 177 |
| RseI | CAYNNNNRTG | 2 cut(s) | 79, 102 |
| SaqAI | TTAA | 3 cut(s) | 69, 215, 242 |
| Sau3AI | GATC | 1 cut(s) | 351 |
| SchI | GAGTC | 2 cut(s) | 29, 274 |
| ScrFI | CCNGG | 1 cut(s) | 172 |
| SduI | GDGCHC | 1 cut(s) | 276 |
| SetI | ASST | 5 cut(s) | 28, 234, 322, 377, 396 |
| SfaNI | GCATC | 1 cut(s) | 139 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 79, 102 |
| SmlI | CTYRAG | 1 cut(s) | 42 |
| SmoI | CTYRAG | 1 cut(s) | 42 |
| SphI | GCATGC | 1 cut(s) | 89 |
| Sse9I | AATT | 2 cut(s) | 144, 162 |
| SsiI | CCGC | 1 cut(s) | 253 |
| StyD4I | CCNGG | 1 cut(s) | 170 |
| TaaI | ACNGT | 1 cut(s) | 8 |
| TasI | AATT | 2 cut(s) | 144, 162 |
| TfiI | GAWTC | 2 cut(s) | 133, 382 |
| Tru1I | TTAA | 3 cut(s) | 69, 215, 242 |
| Tru9I | TTAA | 3 cut(s) | 69, 215, 242 |
| TspDTI | ATGAA | 4 cut(s) | 4, 17, 86, 120 |
| VneI | GTGCAC | 1 cut(s) | 272 |
| XceI | RCATGY | 1 cut(s) | 89 |
| XmnI | GAANNNNTTC | 1 cut(s) | 8 |