NHL domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G70280 AT1G70280 |
| fragaria_vesca | FvH4_4g34810 FvH4_4g34810 FvH4_6g50490 FvH4_6g50490 |
| malus_domestica | MD09G1036000.v1.1 MD13G1089500.v1.1 MD16G1089700.v1.1 MD17G1037600.v1.1 |
| prunus_persica | Prupe.1G256300_v2.0.a1 Prupe.3G281800_v2.0.a1 Prupe.3G281800_v2.0.a1 |
| pyrus_communis | pycom111g02890 pycom13g07800 pycom16g07680 pycom17g03370 |
| rosa_chinensis | RchiOBHm_Chr2g0170891 RchiOBHm_Chr4g0444151 |
| rosa_laevigata | RLG00000021991 |
| rosa_multiflora | Rmu_sc0009938.1_g000002 Rmu_sc0012638.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00080990 Rroxscaffold_5G00384740 |
| rosa_rugosa | Rorug02G0552200 Rorug04G0350500 |
| rosa_samantha | Rh2AG624900 Rh2BG635600 Rh2CG604300 Rh2DG647200 Rh4AG411100 Rh4BG422500 Rh4CG436900 Rh4DG417800 |
| rosa_wichuraiana | Rw2G051760 Rw4G035320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 167, 1085, 1100, 1331 |
| AclWI | GGATC | 3 cut(s) | 667, 946, 1385 |
| AcoI | YGGCCR | 1 cut(s) | 1152 |
| AcsI | RAATTY | 3 cut(s) | 109, 587, 984 |
| AcyI | GRCGYC | 2 cut(s) | 116, 178 |
| AfaI | GTAC | 2 cut(s) | 101, 796 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 433, 837, 1342, 1400 |
| AflIII | ACRYGT | 1 cut(s) | 765 |
| AgeI | ACCGGT | 1 cut(s) | 1422 |
| AgsI | TTSAA | 4 cut(s) | 1005, 1050, 1358, 1434 |
| AjiI | CACGTC | 1 cut(s) | 607 |
| AjnI | CCWGG | 2 cut(s) | 965, 1335 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 369, 401, 918, 950 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1111, 1143 |
| AluBI | AGCT | 9 cut(s) | 53, 238, 283, 358, 627, 662, 952, 1299, 1419 |
| AluI | AGCT | 9 cut(s) | 53, 238, 283, 358, 627, 662, 952, 1299, 1419 |
| Alw26I | GTCTC | 5 cut(s) | 11, 209, 336, 808, 1106 |
| AlwI | GGATC | 3 cut(s) | 667, 946, 1385 |
| AoxI | GGCC | 3 cut(s) | 544, 1058, 1152 |
| ApeKI | GCWGC | 7 cut(s) | 53, 624, 749, 1036, 1231, 1243, 1246 |
| ApoI | RAATTY | 3 cut(s) | 109, 587, 984 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 101, 133, 154, 186 |
| AsiGI | ACCGGT | 1 cut(s) | 1422 |
| AspS9I | GGNCC | 4 cut(s) | 369, 544, 569, 1333 |
| AsuHPI | GGTGA | 2 cut(s) | 199, 1226 |
| AvaII | GGWCC | 3 cut(s) | 369, 569, 1333 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 786, 819 |
| BalI | TGGCCA | 1 cut(s) | 1154 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 778, 810 |
| BbvI | GCAGC | 7 cut(s) | 40, 636, 761, 1048, 1243, 1255, 1258 |
| BccI | CCATC | 7 cut(s) | 178, 221, 392, 560, 853, 1269, 1340 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1238, 1272 |
| BciT130I | CCWGG | 2 cut(s) | 967, 1337 |
| BclI | TGATCA | 2 cut(s) | 1216, 1303 |
| BcoDI | GTCTC | 5 cut(s) | 11, 209, 336, 808, 1106 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 62 |
| BisI | GCNGC | 8 cut(s) | 54, 625, 750, 1037, 1100, 1232, 1244, 1247 |
| BlsI | GCNGC | 8 cut(s) | 55, 626, 751, 1038, 1101, 1233, 1245, 1248 |
| Bme1390I | CCNGG | 2 cut(s) | 967, 1337 |
| Bme18I | GGWCC | 3 cut(s) | 369, 569, 1333 |
| BmgBI | CACGTC | 1 cut(s) | 607 |
| BmgT120I | GGNCC | 4 cut(s) | 369, 544, 569, 1333 |
| BmiI | GGNNCC | 3 cut(s) | 66, 370, 371 |
| BmrFI | CCNGG | 2 cut(s) | 967, 1337 |
| BmrI | ACTGGG | 1 cut(s) | 551 |
| BmsI | GCATC | 5 cut(s) | 499, 571, 726, 831, 1150 |
| BmuI | ACTGGG | 1 cut(s) | 551 |
| BoxI | GACNNNNGTC | 1 cut(s) | 74 |
| BsaAI | YACGTR | 1 cut(s) | 1133 |
| BsaHI | GRCGYC | 2 cut(s) | 116, 178 |
| BsaI | GGTCTC | 2 cut(s) | 11, 1106 |
| BsaJI | CCNNGG | 7 cut(s) | 547, 724, 836, 934, 966, 1155, 1447 |
| BsaWI | WCCGGW | 1 cut(s) | 1422 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 206, 236, 1111, 1141 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 433, 837, 1342, 1400 |
| Bse118I | RCCGGY | 1 cut(s) | 1422 |
| Bse1I | ACTGG | 1 cut(s) | 546 |
| Bse3DI | GCAATG | 1 cut(s) | 388 |
| BseBI | CCWGG | 2 cut(s) | 967, 1337 |
| BseDI | CCNNGG | 7 cut(s) | 547, 724, 836, 934, 966, 1155, 1447 |
| BseGI | GGATG | 8 cut(s) | 571, 846, 910, 1093, 1099, 1165, 1268, 1351 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 433, 837, 1342, 1400 |
| BseMI | GCAATG | 1 cut(s) | 388 |
| BseMII | CTCAG | 3 cut(s) | 22, 891, 1305 |
| BseNI | ACTGG | 1 cut(s) | 546 |
| BseXI | GCAGC | 7 cut(s) | 40, 636, 761, 1048, 1243, 1255, 1258 |
| BseYI | CCCAGC | 1 cut(s) | 512 |
| BshFI | GGCC | 3 cut(s) | 546, 1060, 1154 |
| BshTI | ACCGGT | 1 cut(s) | 1422 |
| BsiSI | CCGG | 1 cut(s) | 1423 |
| BslFI | GGGAC | 2 cut(s) | 355, 809 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 433, 837, 1342, 1400 |
| BsmAI | GTCTC | 5 cut(s) | 11, 209, 336, 808, 1106 |
| BsmBI | CGTCTC | 2 cut(s) | 209, 336 |
| BsmFI | GGGAC | 2 cut(s) | 355, 809 |
| BsmI | GAATGC | 2 cut(s) | 426, 1000 |
| BsnI | GGCC | 3 cut(s) | 546, 1060, 1154 |
| Bso31I | GGTCTC | 2 cut(s) | 11, 1106 |
| Bsp143I | GATC | 5 cut(s) | 672, 938, 1216, 1303, 1390 |
| Bsp19I | CCATGG | 1 cut(s) | 547 |
| BspACI | CCGC | 4 cut(s) | 167, 1085, 1100, 1331 |
| BspANI | GGCC | 3 cut(s) | 546, 1060, 1154 |
| BspCNI | CTCAG | 3 cut(s) | 21, 892, 1306 |
| BspLI | GGNNCC | 3 cut(s) | 66, 370, 371 |
| BspPI | GGATC | 3 cut(s) | 667, 946, 1385 |
| BspTNI | GGTCTC | 2 cut(s) | 11, 1106 |
| BsrDI | GCAATG | 1 cut(s) | 388 |
| BsrFI | RCCGGY | 1 cut(s) | 1422 |
| BsrI | ACTGG | 1 cut(s) | 546 |
| BssAI | RCCGGY | 1 cut(s) | 1422 |
| BssECI | CCNNGG | 7 cut(s) | 547, 724, 836, 934, 966, 1155, 1447 |
| BssMI | GATC | 5 cut(s) | 672, 938, 1216, 1303, 1390 |
| BssNI | GRCGYC | 2 cut(s) | 116, 178 |
| BssT1I | CCWWGG | 5 cut(s) | 547, 724, 836, 934, 1155 |
| Bst2UI | CCWGG | 2 cut(s) | 967, 1337 |
| Bst4CI | ACNGT | 6 cut(s) | 76, 211, 220, 259, 445, 1179 |
| Bst6I | CTCTTC | 2 cut(s) | 781, 811 |
| BstACI | GRCGYC | 2 cut(s) | 116, 178 |
| BstBAI | YACGTR | 1 cut(s) | 1133 |
| BstC8I | GCNNGC | 2 cut(s) | 236, 973 |
| BstDEI | CTNAG | 3 cut(s) | 8, 900, 1314 |
| BstDSI | CCRYGG | 2 cut(s) | 547, 1447 |
| BstF5I | GGATG | 8 cut(s) | 571, 846, 910, 1093, 1099, 1165, 1268, 1351 |
| BstKTI | GATC | 5 cut(s) | 675, 941, 1219, 1306, 1393 |
| BstMAI | GTCTC | 5 cut(s) | 11, 209, 336, 808, 1106 |
| BstMBI | GATC | 5 cut(s) | 672, 938, 1216, 1303, 1390 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 62, 841, 916, 1036, 1151, 1160, 1240, 1416 |
| BstNI | CCWGG | 2 cut(s) | 967, 1337 |
| BstNSI | RCATGY | 2 cut(s) | 769, 975 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 74 |
| BstSCI | CCNGG | 2 cut(s) | 965, 1335 |
| BstV1I | GCAGC | 7 cut(s) | 40, 636, 761, 1048, 1243, 1255, 1258 |
| BstX2I | RGATCY | 2 cut(s) | 672, 1390 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 566 |
| BstYI | RGATCY | 2 cut(s) | 672, 1390 |
| BsuRI | GGCC | 3 cut(s) | 546, 1060, 1154 |
| BtgI | CCRYGG | 2 cut(s) | 547, 1447 |
| BtgZI | GCGATG | 3 cut(s) | 749, 1241, 1391 |
| BtrI | CACGTC | 1 cut(s) | 607 |
| BtsCI | GGATG | 8 cut(s) | 571, 846, 910, 1093, 1099, 1165, 1268, 1351 |
| BtsI | GCAGTG | 2 cut(s) | 1368, 1417 |
| BtsIMutI | CAGTG | 6 cut(s) | 143, 255, 887, 1311, 1368, 1417 |
| Cac8I | GCNNGC | 2 cut(s) | 236, 973 |
| Cfr10I | RCCGGY | 1 cut(s) | 1422 |
| Cfr13I | GGNCC | 4 cut(s) | 369, 544, 569, 1333 |
| CseI | GACGC | 2 cut(s) | 105, 167 |
| Csp6I | GTAC | 2 cut(s) | 100, 795 |
| CspAI | ACCGGT | 1 cut(s) | 1422 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1300, 1335 |
| CviAII | CATG | 6 cut(s) | 548, 560, 766, 880, 972, 1396 |
| CviQI | GTAC | 2 cut(s) | 100, 795 |
| DdeI | CTNAG | 3 cut(s) | 8, 900, 1314 |
| DpnI | GATC | 5 cut(s) | 674, 940, 1218, 1305, 1392 |
| DpnII | GATC | 5 cut(s) | 672, 938, 1216, 1303, 1390 |
| DraI | TTTAAA | 1 cut(s) | 93 |
| EaeI | YGGCCR | 1 cut(s) | 1152 |
| Eam1104I | CTCTTC | 2 cut(s) | 781, 811 |
| EarI | CTCTTC | 2 cut(s) | 781, 811 |
| Eco130I | CCWWGG | 5 cut(s) | 547, 724, 836, 934, 1155 |
| Eco31I | GGTCTC | 2 cut(s) | 11, 1106 |
| Eco47I | GGWCC | 3 cut(s) | 369, 569, 1333 |
| EcoO109I | RGGNCCY | 1 cut(s) | 369 |
| EcoRII | CCWGG | 2 cut(s) | 965, 1335 |
| EcoT14I | CCWWGG | 5 cut(s) | 547, 724, 836, 934, 1155 |
| ErhI | CCWWGG | 5 cut(s) | 547, 724, 836, 934, 1155 |
| Esp3I | CGTCTC | 2 cut(s) | 209, 336 |
| FaeI | CATG | 6 cut(s) | 551, 563, 769, 883, 975, 1399 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 918, 950 |
| FaqI | GGGAC | 2 cut(s) | 355, 809 |
| FatI | CATG | 6 cut(s) | 547, 559, 765, 879, 971, 1395 |
| FbaI | TGATCA | 2 cut(s) | 1216, 1303 |
| Fnu4HI | GCNGC | 8 cut(s) | 54, 625, 750, 1037, 1100, 1232, 1244, 1247 |
| FokI | GGATG | 8 cut(s) | 578, 853, 917, 1100, 1106, 1172, 1255, 1358 |
| Fsp4HI | GCNGC | 8 cut(s) | 54, 625, 750, 1037, 1100, 1232, 1244, 1247 |
| GluI | GCNGC | 8 cut(s) | 54, 625, 750, 1037, 1100, 1232, 1244, 1247 |
| GsaI | CCCAGC | 1 cut(s) | 516 |
| HaeIII | GGCC | 3 cut(s) | 546, 1060, 1154 |
| HapII | CCGG | 1 cut(s) | 1423 |
| HgaI | GACGC | 2 cut(s) | 105, 167 |
| Hin1I | GRCGYC | 2 cut(s) | 116, 178 |
| Hin1II | CATG | 6 cut(s) | 551, 563, 769, 883, 975, 1399 |
| HindIII | AAGCTT | 2 cut(s) | 236, 950 |
| HinfI | GANTC | 3 cut(s) | 296, 321, 892 |
| HpaII | CCGG | 1 cut(s) | 1423 |
| HphI | GGTGA | 2 cut(s) | 199, 1226 |
| Hpy166II | GTNNAC | 3 cut(s) | 207, 613, 1428 |
| Hpy188I | TCNGA | 5 cut(s) | 11, 50, 69, 183, 870 |
| Hpy188III | TCNNGA | 1 cut(s) | 496 |
| Hpy8I | GTNNAC | 3 cut(s) | 207, 613, 1428 |
| Hpy99I | CGWCG | 2 cut(s) | 64, 331 |
| HpyAV | CCTTC | 3 cut(s) | 371, 920, 1345 |
| HpyCH4III | ACNGT | 6 cut(s) | 76, 211, 220, 259, 445, 1179 |
| HpyCH4IV | ACGT | 2 cut(s) | 606, 1132 |
| HpyCH4V | TGCA | 8 cut(s) | 365, 424, 473, 530, 584, 781, 1030, 1066 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 62, 841, 916, 1036, 1151, 1160, 1240, 1416 |
| HpyF3I | CTNAG | 3 cut(s) | 8, 900, 1314 |
| HpySE526I | ACGT | 2 cut(s) | 606, 1132 |
| Hsp92I | GRCGYC | 2 cut(s) | 116, 178 |
| Hsp92II | CATG | 6 cut(s) | 551, 563, 769, 883, 975, 1399 |
| KflI | GGGWCCC | 1 cut(s) | 369 |
| Ksp22I | TGATCA | 2 cut(s) | 1216, 1303 |
| Kzo9I | GATC | 5 cut(s) | 672, 938, 1216, 1303, 1390 |
| LmnI | GCTCC | 5 cut(s) | 50, 70, 231, 280, 1339 |
| Lsp1109I | GCAGC | 7 cut(s) | 40, 636, 761, 1048, 1243, 1255, 1258 |
| LweI | GCATC | 5 cut(s) | 499, 571, 726, 831, 1150 |
| MaeII | ACGT | 2 cut(s) | 606, 1132 |
| MaeIII | GTNAC | 4 cut(s) | 76, 141, 308, 761 |
| MalI | GATC | 5 cut(s) | 674, 940, 1218, 1305, 1392 |
| MboI | GATC | 5 cut(s) | 672, 938, 1216, 1303, 1390 |
| MboII | GAAGA | 5 cut(s) | 511, 590, 798, 798, 935 |
| MfeI | CAATTG | 3 cut(s) | 525, 798, 1107 |
| MflI | RGATCY | 2 cut(s) | 672, 1390 |
| MlsI | TGGCCA | 1 cut(s) | 1154 |
| MluCI | AATT | 6 cut(s) | 109, 525, 587, 798, 984, 1107 |
| MluNI | TGGCCA | 1 cut(s) | 1154 |
| MlyI | GAGTC | 1 cut(s) | 290 |
| MmeI | TCCRAC | 5 cut(s) | 92, 367, 700, 920, 1198 |
| Mox20I | TGGCCA | 1 cut(s) | 1154 |
| MscI | TGGCCA | 1 cut(s) | 1154 |
| MseI | TTAA | 2 cut(s) | 92, 1371 |
| MslI | CAYNNNNRTG | 5 cut(s) | 396, 564, 687, 1410, 1433 |
| Msp20I | TGGCCA | 1 cut(s) | 1154 |
| MspA1I | CMGCKG | 2 cut(s) | 167, 627 |
| MspI | CCGG | 1 cut(s) | 1423 |
| MspR9I | CCNGG | 2 cut(s) | 967, 1337 |
| MunI | CAATTG | 3 cut(s) | 525, 798, 1107 |
| Mva1269I | GAATGC | 2 cut(s) | 426, 1000 |
| MvaI | CCWGG | 2 cut(s) | 967, 1337 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 62, 841, 916, 1036, 1151, 1160, 1240, 1416 |
| NcoI | CCATGG | 1 cut(s) | 547 |
| NdeII | GATC | 5 cut(s) | 672, 938, 1216, 1303, 1390 |
| NlaIII | CATG | 6 cut(s) | 551, 563, 769, 883, 975, 1399 |
| NlaIV | GGNNCC | 3 cut(s) | 66, 370, 371 |
| NmeAIII | GCCGAG | 1 cut(s) | 1217 |
| NmuCI | GTSAC | 2 cut(s) | 76, 141 |
| NspI | RCATGY | 2 cut(s) | 769, 975 |
| PaeI | GCATGC | 1 cut(s) | 975 |
| PciI | ACATGT | 1 cut(s) | 765 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 65, 179 |
| PctI | GAATGC | 2 cut(s) | 426, 1000 |
| PfeI | GAWTC | 2 cut(s) | 321, 892 |
| PfoI | TCCNGGA | 1 cut(s) | 1335 |
| PinAI | ACCGGT | 1 cut(s) | 1422 |
| PkrI | GCNGC | 8 cut(s) | 55, 626, 751, 1038, 1101, 1233, 1245, 1248 |
| PleI | GAGTC | 1 cut(s) | 290 |
| PpsI | GAGTC | 1 cut(s) | 290 |
| Ppu21I | YACGTR | 1 cut(s) | 1133 |
| PpuMI | RGGWCCY | 1 cut(s) | 369 |
| PscI | ACATGT | 1 cut(s) | 765 |
| PshAI | GACNNNNGTC | 1 cut(s) | 74 |
| Psp5II | RGGWCCY | 1 cut(s) | 369 |
| Psp6I | CCWGG | 2 cut(s) | 965, 1335 |
| PspFI | CCCAGC | 1 cut(s) | 512 |
| PspGI | CCWGG | 2 cut(s) | 965, 1335 |
| PspN4I | GGNNCC | 3 cut(s) | 66, 370, 371 |
| PspPI | GGNCC | 4 cut(s) | 369, 544, 569, 1333 |
| PspPPI | RGGWCCY | 1 cut(s) | 369 |
| PsuI | RGATCY | 2 cut(s) | 672, 1390 |
| PvuII | CAGCTG | 1 cut(s) | 627 |
| RsaI | GTAC | 2 cut(s) | 101, 796 |
| RsaNI | GTAC | 2 cut(s) | 100, 795 |
| RseI | CAYNNNNRTG | 5 cut(s) | 396, 564, 687, 1410, 1433 |
| SaqAI | TTAA | 2 cut(s) | 92, 1371 |
| SatI | GCNGC | 8 cut(s) | 54, 625, 750, 1037, 1100, 1232, 1244, 1247 |
| Sau3AI | GATC | 5 cut(s) | 672, 938, 1216, 1303, 1390 |
| Sau96I | GGNCC | 4 cut(s) | 369, 544, 569, 1333 |
| SchI | GAGTC | 1 cut(s) | 290 |
| ScrFI | CCNGG | 2 cut(s) | 967, 1337 |
| SfaNI | GCATC | 5 cut(s) | 499, 571, 726, 831, 1150 |
| SinI | GGWCC | 3 cut(s) | 369, 569, 1333 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 396, 564, 687, 1410, 1433 |
| SphI | GCATGC | 1 cut(s) | 975 |
| Sse9I | AATT | 6 cut(s) | 109, 525, 587, 798, 984, 1107 |
| SsiI | CCGC | 4 cut(s) | 167, 1085, 1100, 1331 |
| StyD4I | CCNGG | 2 cut(s) | 965, 1335 |
| StyI | CCWWGG | 5 cut(s) | 547, 724, 836, 934, 1155 |
| TaaI | ACNGT | 6 cut(s) | 76, 211, 220, 259, 445, 1179 |
| TaiI | ACGT | 2 cut(s) | 609, 1135 |
| TasI | AATT | 6 cut(s) | 109, 525, 587, 798, 984, 1107 |
| TauI | GCSGC | 1 cut(s) | 1102 |
| TfiI | GAWTC | 2 cut(s) | 321, 892 |
| Tru1I | TTAA | 2 cut(s) | 92, 1371 |
| Tru9I | TTAA | 2 cut(s) | 92, 1371 |
| TscAI | CASTG | 6 cut(s) | 150, 262, 894, 1318, 1368, 1417 |
| TseFI | GTSAC | 2 cut(s) | 76, 141 |
| TseI | GCWGC | 7 cut(s) | 53, 624, 749, 1036, 1231, 1243, 1246 |
| Tsp45I | GTSAC | 2 cut(s) | 76, 141 |
| TspDTI | ATGAA | 2 cut(s) | 143, 834 |
| TspRI | CASTG | 6 cut(s) | 150, 262, 894, 1318, 1368, 1417 |
| VpaK11BI | GGWCC | 3 cut(s) | 369, 569, 1333 |
| XapI | RAATTY | 3 cut(s) | 109, 587, 984 |
| XceI | RCATGY | 2 cut(s) | 769, 975 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 710, 1343 |