FvH4_5g00791

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0001384
Physical Location & Seq
Reverse (-)
452401 .. 457161
4761 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g00791.t9

Sequence Viewer

Length: 2280 bp
ATGGCGGCGGCTACTGACACCACCACGCAGACGGTGGCCGCGGGAATGGAACTGGCGGGGGACGCGTCGGCGTCGCCGGACGAGGCGGCGGCGAAGGCGGTGACGAAACGCTACGACGGCCTGGTGATGGTGAGGACCAAGGCCATAAAGGGCAAAGGAGCTTGGTACTGGGCCCACCTAGAGCCCATTCTGGTTAACAACACCGACACCGGGCTACCCAAGGCGGTGAAGCTCCGGTGCAATCTGTGCGACGCCATTTTCTCGGCGTCGAATCCGTCGCGCACGGCGTCGGAGCACCTGAAGCGCGGGACCTGCCCTAATTTCAGCAACTTATCCAAGCCAGTCTCGTCTCCGTCGCCAATATCGACTTCTTTGCCCAACTCGGCTCCGCCGCCGCCGTCTCACCACAACCCGAGGAAGCGGAGCTCGTCCTCAGCGGCGGCCTCCGGTAGCGCCCCGGCGTCGTCGTACAGTGTTCCGCCGCAGGGTGTGCTCGATCCGACACGGTTCTGCGGCGGAGAGCTGACGTACGCCGTGCCGGGGGTGCTGACTCAGCAGCCGCATTTGATGTTGTCCGGCGGGAAAGACGACTTGGGAGCTCTGGCGATGCTGGAGGACAGTGTGAAGAAGCTCAAGAGTCCCAAAACCTCACCGGGGCCGACGCTCGGCAAGACCCAAGTCGACTGTGCTCTTGATTTTCTTGCTGATTGGGTCTATGAGTCTTGTGGTTCGGTCTCGTTTTCGAGCCTTGAGCACCCCAAGTTCCGAGCTTTTCTTAACCAGGTGGGCTTGCCGGCGGTTTCCGGGAGGGAGTTCACCGGGTCTAGGTTGGATGCTAAGTTTGAGGAAGCAAAGGCCGAGTCGGAAGCCAGGATTAGAGACGCTATGTTCTTCCAGATTGCCTCTGATGGCTGGAAGATCAAGAATGCTGGCGGTTTAGGTGAGGATAATCTTGTCAATTTGACTGTGAATCTTCCCAATGGGACTAGTTTGTACCGGAGGGCGGTGTTTGTCGGCGGCGCTGTGCCGTCTAAGTATGCAGAGGAGGTTTTGTGGGAGACGATTACGAGCATTTGTGGGAATGCTGTGCAGCAATGTGTAGGAATAGTAGCAGACAGGTTTAAGGTCAAGGCATTGAGGAATTTAGAGAGTCAGAATCACTGGATGGTTAATCTTTGTTGTCAGTTTCAGGGTTTTACTAGTTTGATTAAGGATTTCAGTAGGGAGCTTCGCTTGTTCAAGGCTGTTACTGAAAACTGTTACAAGCTTGCGAGTTTTGTGAATAACAAGTCTCAGGTTAGGAGTAGCTTTCAGAAGTATCAGTCCCAGAAATATGGTTATACTGGTTTATTACGAGTACCATCGATGCAAGATTATGAAATGCTCAACTTTGGTCCAGTGTATGTAATGGTTGAGGATATTCTTAGCTCAAGGCCAGCACTTGAGTTGGTTGTGCTAGATGAATCTTATACTTTGGTATCAATGGAGGACCCGATGGCAAGAGAAGTTGCTGAGATGATTGGGCACGAGAGGTTTTGGAATGAATTGCGGGCGGTGCATTCTTTGGTTAAGCTTATCAAGGACATGGCTCAAGAGATTGAGAAAGAGAGGCCACTGGTTGGGAAATGCCTCCCACTTTGGGATGGATTAAGAGCAGAAGTGAAGATTTGGTGTTCAAGTAACCACATTGATGAAGGTCCAGTGGAAAAGGTAATCGAAAAGCGGTTCAAGAAGAATTATCATCCAGCTTGGGCTGCTGCATTTATACTCGATCCAGTTTATTTGATTAGGGACAATAGTGGGAAGTATCTTCCACCATTCAATTTGTTGACACCAGAGCAGGAGAAGGATGTGGACAAGCTCATAACCCGGCTTGTATCAAGGGAGGAAGCTCACATTGCACTAATGGAACTCATGAAATGGAGAACAGAAGGGCTTGATCCCGTATATGCGCGCGCTGTACAAATGAAGGAGAGGGATCCCGTTTCAGGCAAGATGAGAATTGCTAACCCTCAAAGCAGTAGACTTGTGTGGGAAACATACCTCACTGAATTTAAGTCACTAGGGAAAGTTGCAGTTAGGCTCATTTTCCTTCATGCAACTTCATGTGGGTTCAAATCCAGTGGGTCATTAATGAGATGGGTGTCTCCAAGGGTGAATATGGACAAGGCACAGAAGTTGATCTTCATTGCAGCTCATTCCAAGCTTGAAAGGCGGGATTTTTCCTGTGATGAAGATAAGGACGCAGAGCTACTTGCCCTAGAAAACGGGTTTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659

Protein Analysis

760

Amino Acids

84.03

Weight (kDa)

8.43

Isoelectric Point (pI)

40.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7963 PF25908 26 - 109 1.1e-46 Domain of unknown function (DUF7963)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 320
AccB7I CCANNNNNTGG 1 cut(s) 1619
AccI GTMKAC 2 cut(s) 681, 2023
AccII CGCG 6 cut(s) 41, 65, 280, 306, 1954, 1956
AclWI GGATC 5 cut(s) 491, 1766, 1934, 1973, 1986
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 2 cut(s) 1141, 2051
AcuI CTGAAG 1 cut(s) 320
AcyI GRCGYC 5 cut(s) 71, 252, 266, 287, 461
AfaI GTAC 6 cut(s) 167, 470, 530, 995, 1359, 1962
AflIII ACRYGT 1 cut(s) 63
AgsI TTSAA 6 cut(s) 1240, 1677, 1729, 1822, 2116, 2210
AhlI ACTAGT 2 cut(s) 986, 1199
AjnI CCWGG 3 cut(s) 120, 780, 869
AjuI GAANNNNNNNTTGG 4 cut(s) 352, 384, 575, 607
Alw21I GWGCWC 6 cut(s) 297, 428, 495, 601, 691, 756
Alw26I GTCTC 8 cut(s) 349, 354, 405, 739, 873, 1052, 1296, 2151
AlwI GGATC 5 cut(s) 491, 1766, 1934, 1973, 1986
Ama87I CYCGRG 1 cut(s) 412
AoxI GGCC 9 cut(s) 36, 118, 141, 171, 441, 656, 855, 1433, 1610
ApaI GGGCCC 1 cut(s) 175
ApeKI GCWGC 5 cut(s) 556, 1090, 1754, 1757, 2192
ApoI RAATTY 2 cut(s) 1141, 2051
ArsI GACNNNNNNTTYG 2 cut(s) 845, 877
AseI ATTAAT 1 cut(s) 2132
AspLEI GCGC 7 cut(s) 282, 306, 455, 1022, 1954, 1956, 1958
AspS9I GGNCC 8 cut(s) 135, 171, 172, 309, 656, 1394, 1489, 1697
AsuC2I CCSGG 7 cut(s) 211, 458, 540, 654, 805, 820, 1870
AsuHPI GGTGA 9 cut(s) 112, 136, 142, 238, 395, 642, 808, 953, 2167
AvaI CYCGRG 1 cut(s) 412
AvaII GGWCC 5 cut(s) 135, 309, 1394, 1489, 1697
BaeGI GKGCMC 2 cut(s) 175, 1527
BaeI ACNNNNGTAYC 2 cut(s) 1461, 1494
BamHI GGATCC 1 cut(s) 1978
BanII GRGCYC 4 cut(s) 175, 186, 428, 601
BauI CACGAG 1 cut(s) 1526
Bbv12I GWGCWC 6 cut(s) 297, 428, 495, 601, 691, 756
BbvCI CCTCAGC 1 cut(s) 433
BbvI GCAGC 5 cut(s) 568, 1102, 1741, 1744, 2204
BccI CCATC 7 cut(s) 121, 902, 1159, 1369, 1489, 1637, 2133
BceAI ACGGC 5 cut(s) 133, 300, 382, 518, 1012
BcgI CGANNNNNNTGC 2 cut(s) 355, 389
BciT130I CCWGG 3 cut(s) 122, 782, 871
BcnI CCSGG 7 cut(s) 211, 458, 540, 654, 805, 820, 1870
BcoDI GTCTC 8 cut(s) 349, 354, 405, 739, 873, 1052, 1296, 2151
BcuI ACTAGT 2 cut(s) 986, 1199
BfaI CTAG 7 cut(s) 179, 825, 987, 1200, 1457, 2063, 2261
BfoI RGCGCY 2 cut(s) 456, 1023
BfuAI ACCTGC 1 cut(s) 320
Bme18I GGWCC 5 cut(s) 135, 309, 1394, 1489, 1697
BmeT110I CYCGRG 1 cut(s) 412
BmgT120I GGNCC 8 cut(s) 135, 171, 172, 309, 656, 1394, 1489, 1697
BmiI GGNNCC 6 cut(s) 173, 310, 387, 657, 1491, 1980
BmrI ACTGGG 1 cut(s) 178
BmsI GCATC 3 cut(s) 597, 823, 1356
BmuI ACTGGG 1 cut(s) 178
BoxI GACNNNNGTC 1 cut(s) 677
BpmI CTGGAG 1 cut(s) 632
Bpu10I CCTNAGC 1 cut(s) 433
BpuEI CTTGAG 5 cut(s) 617, 770, 1414, 1463, 1575
BpuMI CCSGG 7 cut(s) 211, 458, 540, 654, 805, 820, 1870
Bsa29I ATCGAT 1 cut(s) 1364
BsaHI GRCGYC 5 cut(s) 71, 252, 266, 287, 461
BsaI GGTCTC 1 cut(s) 739
BsaJI CCNNGG 8 cut(s) 39, 138, 219, 413, 456, 539, 653, 2150
BsaWI WCCGGW 3 cut(s) 234, 446, 996
BsaXI ACNNNNNCTCC 2 cut(s) 1037, 1067
Bse118I RCCGGY 1 cut(s) 793
Bse3DI GCAATG 3 cut(s) 1100, 1896, 2187
BseBI CCWGG 3 cut(s) 122, 782, 871
BseCI ATCGAT 1 cut(s) 1364
BseDI CCNNGG 8 cut(s) 39, 138, 219, 413, 456, 539, 653, 2150
BseGI GGATG 5 cut(s) 838, 1170, 1648, 1741, 1855
BseMI GCAATG 3 cut(s) 1100, 1896, 2187
BseMII CTCAG 4 cut(s) 447, 566, 1307, 1503
BsePI GCGCGC 2 cut(s) 1952, 1954
BseRI GAGGAG 1 cut(s) 1058
BseSI GKGCMC 2 cut(s) 175, 1527
BseXI GCAGC 5 cut(s) 568, 1102, 1741, 1744, 2204
BsgI GTGCAG 1 cut(s) 1109
Bsh1236I CGCG 6 cut(s) 41, 65, 280, 306, 1954, 1956
BshFI GGCC 9 cut(s) 38, 120, 143, 173, 443, 658, 857, 1435, 1612
BshVI ATCGAT 1 cut(s) 1364
BsiHKAI GWGCWC 6 cut(s) 297, 428, 495, 601, 691, 756
BsiHKCI CYCGRG 1 cut(s) 412
BsiWI CGTACG 1 cut(s) 528
BslFI GGGAC 6 cut(s) 74, 322, 624, 997, 1309, 1805
BsmAI GTCTC 8 cut(s) 349, 354, 405, 739, 873, 1052, 1296, 2151
BsmBI CGTCTC 4 cut(s) 354, 405, 873, 1052
BsmFI GGGAC 6 cut(s) 74, 322, 624, 997, 1309, 1805
BsmI GAATGC 3 cut(s) 931, 1087, 1558
BsnI GGCC 9 cut(s) 38, 120, 143, 173, 443, 658, 857, 1435, 1612
Bso31I GGTCTC 1 cut(s) 739
BsoBI CYCGRG 1 cut(s) 412
Bsp120I GGGCCC 1 cut(s) 171
Bsp1286I GDGCHC 9 cut(s) 175, 186, 297, 428, 495, 601, 691, 756, 1527
Bsp1407I TGTACA 1 cut(s) 1960
Bsp143I GATC 6 cut(s) 496, 918, 1771, 1939, 1978, 2181
BspANI GGCC 9 cut(s) 38, 120, 143, 173, 443, 658, 857, 1435, 1612
BspCNI CTCAG 4 cut(s) 446, 565, 1306, 1504
BspDI ATCGAT 1 cut(s) 1364
BspFNI CGCG 6 cut(s) 41, 65, 280, 306, 1954, 1956
BspHI TCATGA 1 cut(s) 1914
BspLI GGNNCC 6 cut(s) 173, 310, 387, 657, 1491, 1980
BspMI ACCTGC 1 cut(s) 320
BspPI GGATC 5 cut(s) 491, 1766, 1934, 1973, 1986
BspTNI GGTCTC 1 cut(s) 739
BsrDI GCAATG 3 cut(s) 1100, 1896, 2187
BsrFI RCCGGY 1 cut(s) 793
BsrGI TGTACA 1 cut(s) 1960
BssAI RCCGGY 1 cut(s) 793
BssECI CCNNGG 8 cut(s) 39, 138, 219, 413, 456, 539, 653, 2150
BssHII GCGCGC 2 cut(s) 1952, 1954
BssMI GATC 6 cut(s) 496, 918, 1771, 1939, 1978, 2181
BssNI GRCGYC 5 cut(s) 71, 252, 266, 287, 461
BssSI CACGAG 1 cut(s) 1526
BssT1I CCWWGG 3 cut(s) 138, 219, 2150
Bst2BI CACGAG 1 cut(s) 1526
Bst2UI CCWGG 3 cut(s) 122, 782, 871
Bst4CI ACNGT 7 cut(s) 34, 473, 507, 620, 686, 967, 1259
BstACI GRCGYC 5 cut(s) 71, 252, 266, 287, 461
BstAPI GCANNNNNTGC 2 cut(s) 246, 490
BstAUI TGTACA 1 cut(s) 1960
BstC8I GCNNGC 8 cut(s) 791, 795, 931, 1269, 1437, 1551, 1954, 1956
BstDEI CTNAG 7 cut(s) 433, 552, 837, 1032, 1293, 1424, 1512
BstDSI CCRYGG 1 cut(s) 39
BstF5I GGATG 5 cut(s) 838, 1170, 1648, 1741, 1855
BstFNI CGCG 6 cut(s) 41, 65, 280, 306, 1954, 1956
BstH2I RGCGCY 2 cut(s) 456, 1023
BstHHI GCGC 7 cut(s) 282, 306, 455, 1022, 1954, 1956, 1958
BstKTI GATC 6 cut(s) 499, 921, 1774, 1942, 1981, 2184
BstMAI GTCTC 8 cut(s) 349, 354, 405, 739, 873, 1052, 1296, 2151
BstMBI GATC 6 cut(s) 496, 918, 1771, 1939, 1978, 2181
BstNI CCWGG 3 cut(s) 122, 782, 871
BstPAI GACNNNNGTC 1 cut(s) 677
BstSLI GKGCMC 2 cut(s) 175, 1527
BstUI CGCG 6 cut(s) 41, 65, 280, 306, 1954, 1956
BstV1I GCAGC 5 cut(s) 568, 1102, 1741, 1744, 2204
BstX2I RGATCY 1 cut(s) 1978
BstXI CCANNNNNNTGG 1 cut(s) 1334
BstYI RGATCY 1 cut(s) 1978
Bsu15I ATCGAT 1 cut(s) 1364
BsuRI GGCC 9 cut(s) 38, 120, 143, 173, 443, 658, 857, 1435, 1612
BsuTUI ATCGAT 1 cut(s) 1364
BtgI CCRYGG 1 cut(s) 39
BtgZI GCGATG 1 cut(s) 620
BtsCI GGATG 5 cut(s) 838, 1170, 1648, 1741, 1855
BtsIMutI CAGTG 8 cut(s) 478, 625, 1159, 1404, 1613, 1707, 2046, 2128
BveI ACCTGC 1 cut(s) 320
Cac8I GCNNGC 8 cut(s) 791, 795, 931, 1269, 1437, 1551, 1954, 1956
CciI TCATGA 1 cut(s) 1914
CfoI GCGC 7 cut(s) 282, 306, 455, 1022, 1954, 1956, 1958
Cfr10I RCCGGY 1 cut(s) 793
Cfr13I GGNCC 8 cut(s) 135, 171, 172, 309, 656, 1394, 1489, 1697
Cfr42I CCGCGG 1 cut(s) 42
ClaI ATCGAT 1 cut(s) 1364
CsiI ACCWGGT 1 cut(s) 780
Csp6I GTAC 6 cut(s) 166, 469, 529, 994, 1358, 1961
CspCI CAANNNNNGTGG 2 cut(s) 2104, 2139
CviAII CATG 4 cut(s) 1585, 1915, 2096, 2106
CviQI GTAC 6 cut(s) 166, 469, 529, 994, 1358, 1961
DdeI CTNAG 7 cut(s) 433, 552, 837, 1032, 1293, 1424, 1512
DpnI GATC 6 cut(s) 498, 920, 1773, 1941, 1980, 2183
DpnII GATC 6 cut(s) 496, 918, 1771, 1939, 1978, 2181
EaeI YGGCCR 1 cut(s) 36
EciI GGCGGA 3 cut(s) 378, 468, 531
Ecl136II GAGCTC 2 cut(s) 426, 599
Eco130I CCWWGG 3 cut(s) 138, 219, 2150
Eco24I GRGCYC 4 cut(s) 175, 186, 428, 601
Eco31I GGTCTC 1 cut(s) 739
Eco47I GGWCC 5 cut(s) 135, 309, 1394, 1489, 1697
Eco53kI GAGCTC 2 cut(s) 426, 599
Eco57I CTGAAG 1 cut(s) 320
Eco88I CYCGRG 1 cut(s) 412
EcoICRI GAGCTC 2 cut(s) 426, 599
EcoO109I RGGNCCY 2 cut(s) 309, 1489
EcoRII CCWGG 3 cut(s) 120, 780, 869
EcoT14I CCWWGG 3 cut(s) 138, 219, 2150
EcoT38I GRGCYC 4 cut(s) 175, 186, 428, 601
ErhI CCWWGG 3 cut(s) 138, 219, 2150
Esp3I CGTCTC 4 cut(s) 354, 405, 873, 1052
FaeI CATG 4 cut(s) 1588, 1918, 2099, 2109
FalI AAGNNNNNCTT 2 cut(s) 2168, 2200
FaqI GGGAC 6 cut(s) 74, 322, 624, 997, 1309, 1805
FatI CATG 4 cut(s) 1584, 1914, 2095, 2105
FauI CCCGC 6 cut(s) 34, 49, 299, 572, 1542, 2208
FblI GTMKAC 2 cut(s) 681, 2023
FokI GGATG 5 cut(s) 845, 1177, 1655, 1728, 1862
FriOI GRGCYC 4 cut(s) 175, 186, 428, 601
FspBI CTAG 7 cut(s) 179, 825, 987, 1200, 1457, 2063, 2261
GlaI GCGC 7 cut(s) 281, 305, 454, 1021, 1953, 1955, 1957
GsuI CTGGAG 1 cut(s) 632
HaeII RGCGCY 2 cut(s) 456, 1023
HaeIII GGCC 9 cut(s) 38, 120, 143, 173, 443, 658, 857, 1435, 1612
HhaI GCGC 7 cut(s) 282, 306, 455, 1022, 1954, 1956, 1958
Hin1I GRCGYC 5 cut(s) 71, 252, 266, 287, 461
Hin1II CATG 4 cut(s) 1588, 1918, 2099, 2109
Hin6I GCGC 7 cut(s) 280, 304, 453, 1020, 1952, 1954, 1956
HinP1I GCGC 7 cut(s) 280, 304, 453, 1020, 1952, 1954, 1956
HincII GTYRAC 3 cut(s) 196, 682, 1830
HindII GTYRAC 3 cut(s) 196, 682, 1830
HindIII AAGCTT 3 cut(s) 1265, 1571, 2204
HinfI GANTC 9 cut(s) 271, 550, 637, 719, 860, 970, 1150, 1156, 1463
HpaI GTTAAC 1 cut(s) 196
HphI GGTGA 9 cut(s) 112, 136, 142, 238, 395, 642, 808, 953, 2167
Hpy166II GTNNAC 6 cut(s) 196, 682, 816, 1830, 1855, 2024
Hpy188I TCNGA 7 cut(s) 292, 501, 767, 865, 907, 1155, 1314
Hpy188III TCNNGA 7 cut(s) 634, 692, 895, 922, 1592, 1729, 1915
Hpy8I GTNNAC 6 cut(s) 196, 682, 816, 1830, 1855, 2024
HpyAV CCTTC 6 cut(s) 88, 1688, 1840, 1925, 1963, 2102
HpyCH4III ACNGT 7 cut(s) 34, 473, 507, 620, 686, 967, 1259
HpyCH4IV ACGT 1 cut(s) 527
HpyF3I CTNAG 7 cut(s) 433, 552, 837, 1032, 1293, 1424, 1512
HpySE526I ACGT 1 cut(s) 527
Hsp92I GRCGYC 5 cut(s) 71, 252, 266, 287, 461
Hsp92II CATG 4 cut(s) 1588, 1918, 2099, 2109
HspAI GCGC 7 cut(s) 280, 304, 453, 1020, 1952, 1954, 1956
KroI GCCGGC 1 cut(s) 793
KroNI GCCGGC 1 cut(s) 795
KspAI GTTAAC 1 cut(s) 196
KspI CCGCGG 1 cut(s) 42
Kzo9I GATC 6 cut(s) 496, 918, 1771, 1939, 1978, 2181
LmnI GCTCC 7 cut(s) 158, 237, 292, 391, 423, 596, 1225
Lsp1109I GCAGC 5 cut(s) 568, 1102, 1741, 1744, 2204
LweI GCATC 3 cut(s) 597, 823, 1356
MabI ACCWGGT 1 cut(s) 780
MaeI CTAG 7 cut(s) 179, 825, 987, 1200, 1457, 2063, 2261
MaeII ACGT 1 cut(s) 527
MaeIII GTNAC 5 cut(s) 100, 1246, 1259, 1679, 2058
MalI GATC 6 cut(s) 498, 920, 1773, 1941, 1980, 2183
MboI GATC 6 cut(s) 496, 918, 1771, 1939, 1978, 2181
MboII GAAGA 9 cut(s) 637, 883, 928, 965, 1675, 1744, 1802, 2176, 2246
MflI RGATCY 1 cut(s) 1978
MhlI GDGCHC 9 cut(s) 175, 186, 297, 428, 495, 601, 691, 756, 1527
MluCI AATT 8 cut(s) 319, 958, 1141, 1544, 1735, 1822, 2001, 2051
MluI ACGCGT 1 cut(s) 63
MlyI GAGTC 5 cut(s) 544, 646, 728, 869, 1159
MmeI TCCRAC 4 cut(s) 270, 524, 810, 843
MroNI GCCGGC 1 cut(s) 793
MseI TTAA 9 cut(s) 195, 777, 1122, 1170, 1209, 1569, 1649, 2055, 2132
MslI CAYNNNNRTG 1 cut(s) 1689
MspA1I CMGCKG 2 cut(s) 41, 437
Mva1269I GAATGC 3 cut(s) 931, 1087, 1558
MvaI CCWGG 3 cut(s) 122, 782, 871
MvnI CGCG 6 cut(s) 41, 65, 280, 306, 1954, 1956
NaeI GCCGGC 1 cut(s) 795
NciI CCSGG 7 cut(s) 211, 458, 540, 654, 805, 820, 1870
NdeII GATC 6 cut(s) 496, 918, 1771, 1939, 1978, 2181
NgoMIV GCCGGC 1 cut(s) 793
NlaIII CATG 4 cut(s) 1588, 1918, 2099, 2109
NlaIV GGNNCC 6 cut(s) 173, 310, 387, 657, 1491, 1980
NmeAIII GCCGAG 4 cut(s) 242, 362, 645, 883
NmuCI GTSAC 2 cut(s) 100, 2058
PagI TCATGA 1 cut(s) 1914
PauI GCGCGC 2 cut(s) 1952, 1954
PcsI WCGNNNNNNNCGW 2 cut(s) 284, 362
PctI GAATGC 3 cut(s) 931, 1087, 1558
PdiI GCCGGC 1 cut(s) 795
PfeI GAWTC 4 cut(s) 271, 970, 1156, 1463
Pfl23II CGTACG 1 cut(s) 528
PflMI CCANNNNNTGG 1 cut(s) 1619
PfoI TCCNGGA 1 cut(s) 803
PleI GAGTC 5 cut(s) 544, 645, 727, 868, 1158
PpsI GAGTC 5 cut(s) 544, 645, 727, 868, 1158
PpuMI RGGWCCY 2 cut(s) 309, 1489
PshAI GACNNNNGTC 1 cut(s) 677
PshBI ATTAAT 1 cut(s) 2132
Psp124BI GAGCTC 2 cut(s) 428, 601
Psp5II RGGWCCY 2 cut(s) 309, 1489
Psp6I CCWGG 3 cut(s) 120, 780, 869
PspGI CCWGG 3 cut(s) 120, 780, 869
PspLI CGTACG 1 cut(s) 528
PspN4I GGNNCC 6 cut(s) 173, 310, 387, 657, 1491, 1980
PspOMI GGGCCC 1 cut(s) 171
PspPI GGNCC 8 cut(s) 135, 171, 172, 309, 656, 1394, 1489, 1697
PspPPI RGGWCCY 2 cut(s) 309, 1489
PsuI RGATCY 1 cut(s) 1978
PteI GCGCGC 2 cut(s) 1952, 1954
RsaI GTAC 6 cut(s) 167, 470, 530, 995, 1359, 1962
RsaNI GTAC 6 cut(s) 166, 469, 529, 994, 1358, 1961
RseI CAYNNNNRTG 1 cut(s) 1689
SacI GAGCTC 2 cut(s) 428, 601
SacII CCGCGG 1 cut(s) 42
SalI GTCGAC 1 cut(s) 680
SaqAI TTAA 9 cut(s) 195, 777, 1122, 1170, 1209, 1569, 1649, 2055, 2132
Sau3AI GATC 6 cut(s) 496, 918, 1771, 1939, 1978, 2181
Sau96I GGNCC 8 cut(s) 135, 171, 172, 309, 656, 1394, 1489, 1697
SchI GAGTC 5 cut(s) 544, 646, 728, 869, 1159
SduI GDGCHC 9 cut(s) 175, 186, 297, 428, 495, 601, 691, 756, 1527
SexAI ACCWGGT 1 cut(s) 780
SfaNI GCATC 3 cut(s) 597, 823, 1356
Sfr303I CCGCGG 1 cut(s) 42
SgrBI CCGCGG 1 cut(s) 42
SinI GGWCC 5 cut(s) 135, 309, 1394, 1489, 1697
SmiMI CAYNNNNRTG 1 cut(s) 1689
SmlI CTYRAG 5 cut(s) 632, 749, 1429, 1442, 1590
SmoI CTYRAG 5 cut(s) 632, 749, 1429, 1442, 1590
SpeI ACTAGT 2 cut(s) 986, 1199
Sse9I AATT 8 cut(s) 319, 958, 1141, 1544, 1735, 1822, 2001, 2051
SspMI CTAG 7 cut(s) 179, 825, 987, 1200, 1457, 2063, 2261
SstI GAGCTC 2 cut(s) 428, 601
StyI CCWWGG 3 cut(s) 138, 219, 2150
TaaI ACNGT 7 cut(s) 34, 473, 507, 620, 686, 967, 1259
TaiI ACGT 1 cut(s) 530
TaqI TCGA 8 cut(s) 269, 365, 495, 681, 743, 1364, 1716, 1770
TaqII GACCGA 1 cut(s) 721
TasI AATT 8 cut(s) 319, 958, 1141, 1544, 1735, 1822, 2001, 2051
TatI WGTACW 1 cut(s) 1960
TfiI GAWTC 4 cut(s) 271, 970, 1156, 1463
Tru1I TTAA 9 cut(s) 195, 777, 1122, 1170, 1209, 1569, 1649, 2055, 2132
Tru9I TTAA 9 cut(s) 195, 777, 1122, 1170, 1209, 1569, 1649, 2055, 2132
TscAI CASTG 8 cut(s) 478, 625, 1166, 1404, 1620, 1707, 2053, 2128
TseFI GTSAC 2 cut(s) 100, 2058
TseI GCWGC 5 cut(s) 556, 1090, 1754, 1757, 2192
Tsp45I GTSAC 2 cut(s) 100, 2058
TspGWI ACGGA 2 cut(s) 264, 342
TspRI CASTG 8 cut(s) 478, 625, 1166, 1404, 1620, 1707, 2053, 2128
Van91I CCANNNNNTGG 1 cut(s) 1619
VpaK11BI GGWCC 5 cut(s) 135, 309, 1394, 1489, 1697
VspI ATTAAT 1 cut(s) 2132
XapI RAATTY 2 cut(s) 1141, 2051
XcmI CCANNNNNNNNNTGG 1 cut(s) 31
XmiI GTMKAC 2 cut(s) 681, 2023
XspI CTAG 7 cut(s) 179, 825, 987, 1200, 1457, 2063, 2261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.