RchiOBHm_Chr7g0201331

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0001384
Physical Location & Seq
Forward (+)
18943663 .. 18947957
4295 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18021

Sequence Viewer

Length: 2181 bp
ATGGTGAGGAACAAGGCCATAAAGGGCAAAGGGGCTTGGTACTGGGCCCACCTAGAGCCCATTCTGGTTCACAACACCGACACCGGGCTACCCAAGGCCGTGAAGCTCCGCTGCGCTCTCTGCGAGGCCATTTTCTCGGCGTCGAACCCGTCGCGCACGGCGTCGGAGCACCTAAAGCGCGGGACTTGCCCCAATTTCAGCTCCGCATCCAAACCCATTTCGTCTCCGTCGCCAATATCGACTTCTTTGCCCAACTCCGCTCCGCCGCCGCCGCCGTCCCACCACAACCCCCGGAAGCGGAGCTCCTCCTCGGCGGCGGCGGCCTCCGGGAGCGCCCCGACGCCGTCGTACAGCGTTCCGCCGCAGGGGATAGTCGATCCGACACGGTTCTGCGGCGGCGAGCTGACGTACGCGTCGGCGGTGACGACGACGGTGCTGACTCAGCAGCCGCATTTGATGTTGTCCGGGGGTAAAGACGATTTGGGAGCTCTGGCGATGCTGGAGGACAGTGTGAAGAAGCTCAAGAGTCCCAAAACCTCACCTGGCCCAACGCTGTGTAAGAGCCAAGTCGATTGTGCGCTTGATTTTCTTGCTGATTGGGTCTACGAGTCTTGTGGGTCGGTCTCATTTTCGAGCCTGGAGCACCCCAAGTTCCGAGCTTTTCTTAACCAGGTGGGCTTGCCGGCGATTTCCCGGAGGGAGTTCACCGGGTCGAGGTTGGATGCTAAGTTTGAGGAAGCAAAGGCCGAGTCGGAGGCCAGAATTAGAGACGCTATGTTCTTCCAGATTGCCTCTGATGGATGGAAGTCCAAGAATGCTGGGGGTTTAGGTGAGGATAGTCTTGTCAATTTGACTGTGAATCTTCCCAATGGGACTAGTGTGTACCGGAGGGCGGTGTTTGTTGGCGGCTCTGTGCCGTGGAAGTACGCCGAGGAGGTTCTGTGGGAGACGATTACGAGCATTTGTGGGAATGCTGTGCAACAATGTGTAGGAATAGTAGCGGACAGGTTTAGGATCAAAGCATTGAGGAATTTAGAGAGTCAGAATCACTGGATGGTTAATCTAGCTTGTCAGTTTCAGGGTTTTACTAGTTTGATTAAGGATTTCAGTAAGGAGCTTCGATTGTTCAGGGCTGTTACTGAAAACTGTTACAAGCTCGCGAGTTTTGTGAATAACAAGTCCCAGGTTAGGAGTAGCTATCAGAGGTATCAGTCCCAGGAGGGCGGTTATGCTGGTCTATTACGAGTGCCATCAATGCACGATTATGAAACGCTCAACTTTGGTCCAGTGTATGTAATGGTTGAGGATATTCTTAGCTCCGCGCGAGCACTTCAGTTGGTCGTGCTAGATGAATCTTATAAAGGGGTATCAATGGAGGACCAAACGGCAAGAGAAGTTGCTGACATGATTCAGGACGTGGCGTTTTGGAATGAATTGGAGGCGGTGCATTCTTTGGTTAAACTTATCAAGGACATGGCTCAAGAGATTGAGATAGAGAGGCCACTGGTTGGGAAATGCCTCCCACTTTGGGATGAATTAAGAGCAAAAGTGAAGGATTGGTGTTCAAGTTTCCACATTGATGAAGGTCCCGTGGAGAAGGTAATCCAAAAGCGGTTTAAGAAGAATTACCATCCAGCTTGGGCTGCTGCATTTATACTCGATCCAGTTTATTTGATTAAGGACATAAGTGGAAAGTATCTTCCACCATTCAAATTGTTGACGCCAGAGCAAGAGAAGGATGTGGACAAGCTCATAACCCGGCTTGTATCGAGGGAGGAGGCTCACATCGCACTAATGGAACTCATGAAGTGGAGAACAGAAGGGCTTGATCCCGTATATGCTCGCGCTGTACAAATGAAGGAGAAGGATCCCGTTTCAGGCAAGATGAGAATTGCTAACCCACAAAGCAGTAGACTTGTGTGGGAAACATACCTCACTGAATTTAAGTCACTAGGGAAAGTTGCAGTTAGGCTCATTTTCCTTCATGCAACTTCATGTGGGTTCAAATCCAGTTGGTCTTTAATGAGGTGGGTGTCTGCAAATGGGCACTCAAGGGTGAGCATGGACAAGGCACAGAAGTTGATCTTCATTGCAGCTCATTCCAAGCTTGAAAGACGGGATTTTTCCTGTGATGAAGATAAGGATGCAGAGCTACTTGCCCTAGTAAACGGGTTTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659

Protein Analysis

726

Amino Acids

80.8

Weight (kDa)

8.68

Isoelectric Point (pI)

43.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7963 PF25908 1 - 67 5.5e-39 Domain of unknown function (DUF7963)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1359
AasI GACNNNNNNGTC 1 cut(s) 412
AccB7I CCANNNNNTGG 1 cut(s) 1508
AccBSI CCGCTC 1 cut(s) 260
AccI GTMKAC 2 cut(s) 603, 1912
AccII CGCG 7 cut(s) 154, 180, 413, 1160, 1322, 1324, 1845
AclWI GGATC 6 cut(s) 371, 1022, 1655, 1823, 1862, 1875
AcsI RAATTY 2 cut(s) 1030, 1940
AcuI CTGAAG 1 cut(s) 1316
AcyI GRCGYC 4 cut(s) 140, 161, 341, 1721
AfaI GTAC 6 cut(s) 41, 350, 410, 884, 926, 1851
AfiI CCNNNNNNNGG 9 cut(s) 84, 297, 365, 714, 892, 1188, 1508, 1528, 1877
AflIII ACRYGT 1 cut(s) 411
AgsI TTSAA 4 cut(s) 1566, 1711, 2005, 2111
AhlI ACTAGT 2 cut(s) 875, 1088
AjiI CACGTC 1 cut(s) 1417
AjnI CCWGG 5 cut(s) 541, 636, 669, 1182, 1215
AjuI GAANNNNNNNTTGG 2 cut(s) 226, 258
Alw21I GWGCWC 5 cut(s) 171, 305, 490, 645, 1330
Alw26I GTCTC 4 cut(s) 228, 628, 762, 941
AlwI GGATC 6 cut(s) 371, 1022, 1655, 1823, 1862, 1875
AoxI GGCC 9 cut(s) 15, 45, 96, 126, 321, 544, 744, 756, 1499
ApaI GGGCCC 1 cut(s) 49
ApeKI GCWGC 5 cut(s) 111, 445, 1643, 1646, 2093
ApoI RAATTY 2 cut(s) 1030, 1940
ArsI GACNNNNNNTTYG 2 cut(s) 734, 766
AspLEI GCGC 7 cut(s) 116, 156, 180, 335, 580, 1324, 1847
AspS9I GGNCC 6 cut(s) 45, 46, 545, 1283, 1378, 1586
AsuC2I CCSGG 7 cut(s) 85, 292, 328, 466, 694, 709, 1759
AsuHPI GGTGA 6 cut(s) 16, 433, 531, 697, 842, 2068
AvaII GGWCC 3 cut(s) 1283, 1378, 1586
BaeGI GKGCMC 2 cut(s) 49, 2049
BamHI GGATCC 1 cut(s) 1867
BanII GRGCYC 4 cut(s) 49, 60, 305, 490
Bbv12I GWGCWC 5 cut(s) 171, 305, 490, 645, 1330
BbvI GCAGC 5 cut(s) 98, 457, 1630, 1633, 2105
BccI CCATC 5 cut(s) 791, 795, 1048, 1258, 1638
BceAI ACGGC 6 cut(s) 83, 174, 259, 328, 901, 1401
BcgI CGANNNNNNTGC 4 cut(s) 229, 263, 415, 449
BciT130I CCWGG 5 cut(s) 543, 638, 671, 1184, 1217
BcnI CCSGG 7 cut(s) 85, 292, 328, 466, 694, 709, 1759
BcoDI GTCTC 4 cut(s) 228, 628, 762, 941
BcuI ACTAGT 2 cut(s) 875, 1088
BfaI CTAG 7 cut(s) 53, 876, 1064, 1089, 1346, 1952, 2162
BfoI RGCGCY 1 cut(s) 336
Bme18I GGWCC 3 cut(s) 1283, 1378, 1586
BmgBI CACGTC 1 cut(s) 1417
BmgT120I GGNCC 6 cut(s) 45, 46, 545, 1283, 1378, 1586
BmiI GGNNCC 3 cut(s) 47, 1588, 1869
BmrI ACTGGG 1 cut(s) 52
BmsI GCATC 4 cut(s) 215, 486, 712, 2134
BmuI ACTGGG 1 cut(s) 52
BpmI CTGGAG 2 cut(s) 521, 659
BpuEI CTTGAG 3 cut(s) 506, 1464, 2035
BpuMI CCSGG 7 cut(s) 85, 292, 328, 466, 694, 709, 1759
BsaHI GRCGYC 4 cut(s) 140, 161, 341, 1721
BsaI GGTCTC 1 cut(s) 628
BsaJI CCNNGG 9 cut(s) 93, 290, 309, 465, 917, 930, 1182, 1215, 1590
BsaWI WCCGGW 1 cut(s) 885
BsaXI ACNNNNNCTCC 2 cut(s) 926, 956
Bsc4I CCNNNNNNNGG 9 cut(s) 84, 297, 365, 714, 892, 1188, 1508, 1528, 1877
Bse118I RCCGGY 1 cut(s) 682
Bse1I ACTGG 6 cut(s) 47, 1055, 1286, 1509, 1664, 2010
Bse3DI GCAATG 1 cut(s) 2088
BseBI CCWGG 5 cut(s) 543, 638, 671, 1184, 1217
BseDI CCNNGG 9 cut(s) 93, 290, 309, 465, 917, 930, 1182, 1215, 1590
BseGI GGATG 8 cut(s) 206, 727, 806, 1059, 1537, 1630, 1744, 2149
BseLI CCNNNNNNNGG 9 cut(s) 84, 297, 365, 714, 892, 1188, 1508, 1528, 1877
BseMI GCAATG 1 cut(s) 2088
BseMII CTCAG 1 cut(s) 455
BseNI ACTGG 6 cut(s) 47, 1055, 1286, 1509, 1664, 2010
BseRI GAGGAG 4 cut(s) 295, 298, 947, 1790
BseSI GKGCMC 2 cut(s) 49, 2049
BseXI GCAGC 5 cut(s) 98, 457, 1630, 1633, 2105
BseYI CCCAGC 1 cut(s) 818
Bsh1236I CGCG 7 cut(s) 154, 180, 413, 1160, 1322, 1324, 1845
BshFI GGCC 9 cut(s) 17, 47, 98, 128, 323, 546, 746, 758, 1501
BsiHKAI GWGCWC 5 cut(s) 171, 305, 490, 645, 1330
BsiSI CCGG 9 cut(s) 84, 292, 327, 465, 683, 694, 708, 886, 1759
BsiWI CGTACG 1 cut(s) 408
BslFI GGGAC 7 cut(s) 196, 262, 513, 886, 1165, 1198, 1572
BslI CCNNNNNNNGG 9 cut(s) 84, 297, 365, 714, 892, 1188, 1508, 1528, 1877
BsmAI GTCTC 4 cut(s) 228, 628, 762, 941
BsmBI CGTCTC 3 cut(s) 228, 762, 941
BsmFI GGGAC 7 cut(s) 196, 262, 513, 886, 1165, 1198, 1572
BsmI GAATGC 3 cut(s) 820, 976, 1447
BsnI GGCC 9 cut(s) 17, 47, 98, 128, 323, 546, 746, 758, 1501
Bso31I GGTCTC 1 cut(s) 628
Bsp120I GGGCCC 1 cut(s) 45
Bsp1286I GDGCHC 8 cut(s) 49, 60, 171, 305, 490, 645, 1330, 2049
Bsp1407I TGTACA 1 cut(s) 1849
Bsp143I GATC 6 cut(s) 376, 1014, 1660, 1828, 1867, 2082
Bsp68I TCGCGA 1 cut(s) 1160
BspANI GGCC 9 cut(s) 17, 47, 98, 128, 323, 546, 746, 758, 1501
BspCNI CTCAG 1 cut(s) 454
BspFNI CGCG 7 cut(s) 154, 180, 413, 1160, 1322, 1324, 1845
BspHI TCATGA 1 cut(s) 1803
BspLI GGNNCC 3 cut(s) 47, 1588, 1869
BspPI GGATC 6 cut(s) 371, 1022, 1655, 1823, 1862, 1875
BspTNI GGTCTC 1 cut(s) 628
BsrBI CCGCTC 1 cut(s) 260
BsrDI GCAATG 1 cut(s) 2088
BsrFI RCCGGY 1 cut(s) 682
BsrGI TGTACA 1 cut(s) 1849
BsrI ACTGG 6 cut(s) 47, 1055, 1286, 1509, 1664, 2010
BssAI RCCGGY 1 cut(s) 682
BssECI CCNNGG 9 cut(s) 93, 290, 309, 465, 917, 930, 1182, 1215, 1590
BssMI GATC 6 cut(s) 376, 1014, 1660, 1828, 1867, 2082
BssNI GRCGYC 4 cut(s) 140, 161, 341, 1721
BssT1I CCWWGG 1 cut(s) 93
Bst2UI CCWGG 5 cut(s) 543, 638, 671, 1184, 1217
Bst4CI ACNGT 5 cut(s) 387, 433, 509, 856, 1148
BstACI GRCGYC 4 cut(s) 140, 161, 341, 1721
BstAUI TGTACA 1 cut(s) 1849
BstC8I GCNNGC 6 cut(s) 401, 680, 684, 1158, 1326, 1843
BstDEI CTNAG 3 cut(s) 441, 726, 1313
BstDSI CCRYGG 2 cut(s) 917, 1590
BstF5I GGATG 8 cut(s) 206, 727, 806, 1059, 1537, 1630, 1744, 2149
BstFNI CGCG 7 cut(s) 154, 180, 413, 1160, 1322, 1324, 1845
BstH2I RGCGCY 1 cut(s) 336
BstHHI GCGC 7 cut(s) 116, 156, 180, 335, 580, 1324, 1847
BstKTI GATC 6 cut(s) 379, 1017, 1663, 1831, 1870, 2085
BstMAI GTCTC 4 cut(s) 228, 628, 762, 941
BstMBI GATC 6 cut(s) 376, 1014, 1660, 1828, 1867, 2082
BstMWI GCNNNNNNNGC 9 cut(s) 120, 175, 186, 271, 320, 442, 1255, 1643, 1787
BstNI CCWGG 5 cut(s) 543, 638, 671, 1184, 1217
BstSLI GKGCMC 2 cut(s) 49, 2049
BstUI CGCG 7 cut(s) 154, 180, 413, 1160, 1322, 1324, 1845
BstV1I GCAGC 5 cut(s) 98, 457, 1630, 1633, 2105
BstX2I RGATCY 1 cut(s) 1867
BstYI RGATCY 1 cut(s) 1867
BsuRI GGCC 9 cut(s) 17, 47, 98, 128, 323, 546, 746, 758, 1501
BtgI CCRYGG 2 cut(s) 917, 1590
BtgZI GCGATG 2 cut(s) 509, 1771
BtrI CACGTC 1 cut(s) 1417
BtsCI GGATG 8 cut(s) 206, 727, 806, 1059, 1537, 1630, 1744, 2149
BtsIMutI CAGTG 5 cut(s) 514, 1048, 1293, 1502, 1935
BtuMI TCGCGA 1 cut(s) 1160
Cac8I GCNNGC 6 cut(s) 401, 680, 684, 1158, 1326, 1843
CciI TCATGA 1 cut(s) 1803
CfoI GCGC 7 cut(s) 116, 156, 180, 335, 580, 1324, 1847
Cfr10I RCCGGY 1 cut(s) 682
Cfr13I GGNCC 6 cut(s) 45, 46, 545, 1283, 1378, 1586
CseI GACGC 6 cut(s) 129, 150, 349, 402, 779, 1729
CsiI ACCWGGT 1 cut(s) 669
Csp6I GTAC 6 cut(s) 40, 349, 409, 883, 925, 1850
CviAII CATG 6 cut(s) 1405, 1474, 1804, 1985, 1995, 2062
CviQI GTAC 6 cut(s) 40, 349, 409, 883, 925, 1850
DdeI CTNAG 3 cut(s) 441, 726, 1313
DpnI GATC 6 cut(s) 378, 1016, 1662, 1830, 1869, 2084
DpnII GATC 6 cut(s) 376, 1014, 1660, 1828, 1867, 2082
DrdI GACNNNNNNGTC 1 cut(s) 412
DseDI GACNNNNNNGTC 1 cut(s) 412
EciI GGCGGA 2 cut(s) 252, 348
Ecl136II GAGCTC 2 cut(s) 303, 488
Eco130I CCWWGG 1 cut(s) 93
Eco24I GRGCYC 4 cut(s) 49, 60, 305, 490
Eco31I GGTCTC 1 cut(s) 628
Eco47I GGWCC 3 cut(s) 1283, 1378, 1586
Eco53kI GAGCTC 2 cut(s) 303, 488
Eco57I CTGAAG 1 cut(s) 1316
EcoICRI GAGCTC 2 cut(s) 303, 488
EcoO109I RGGNCCY 1 cut(s) 1586
EcoRII CCWGG 5 cut(s) 541, 636, 669, 1182, 1215
EcoT14I CCWWGG 1 cut(s) 93
EcoT38I GRGCYC 4 cut(s) 49, 60, 305, 490
ErhI CCWWGG 1 cut(s) 93
Esp3I CGTCTC 3 cut(s) 228, 762, 941
FaeI CATG 6 cut(s) 1408, 1477, 1807, 1988, 1998, 2065
FalI AAGNNNNNCTT 2 cut(s) 2069, 2101
FaqI GGGAC 7 cut(s) 196, 262, 513, 886, 1165, 1198, 1572
FatI CATG 6 cut(s) 1404, 1473, 1803, 1984, 1994, 2061
FauI CCCGC 1 cut(s) 173
FblI GTMKAC 2 cut(s) 603, 1912
FokI GGATG 8 cut(s) 193, 734, 813, 1066, 1544, 1617, 1751, 2156
FriOI GRGCYC 4 cut(s) 49, 60, 305, 490
FspBI CTAG 7 cut(s) 53, 876, 1064, 1089, 1346, 1952, 2162
GlaI GCGC 7 cut(s) 115, 155, 179, 334, 579, 1323, 1846
GsaI CCCAGC 1 cut(s) 822
GsuI CTGGAG 2 cut(s) 521, 659
HaeII RGCGCY 1 cut(s) 336
HaeIII GGCC 9 cut(s) 17, 47, 98, 128, 323, 546, 746, 758, 1501
HapII CCGG 9 cut(s) 84, 292, 327, 465, 683, 694, 708, 886, 1759
HgaI GACGC 6 cut(s) 129, 150, 349, 402, 779, 1729
HhaI GCGC 7 cut(s) 116, 156, 180, 335, 580, 1324, 1847
Hin1I GRCGYC 4 cut(s) 140, 161, 341, 1721
Hin1II CATG 6 cut(s) 1408, 1477, 1807, 1988, 1998, 2065
Hin6I GCGC 7 cut(s) 114, 154, 178, 333, 578, 1322, 1845
HinP1I GCGC 7 cut(s) 114, 154, 178, 333, 578, 1322, 1845
HincII GTYRAC 1 cut(s) 1719
HindII GTYRAC 1 cut(s) 1719
HindIII AAGCTT 1 cut(s) 2105
HinfI GANTC 9 cut(s) 439, 526, 608, 749, 859, 1039, 1045, 1352, 1408
HpaII CCGG 9 cut(s) 84, 292, 327, 465, 683, 694, 708, 886, 1759
HphI GGTGA 6 cut(s) 16, 433, 531, 697, 842, 2068
Hpy166II GTNNAC 8 cut(s) 70, 604, 705, 883, 1719, 1744, 1913, 2167
Hpy188I TCNGA 7 cut(s) 166, 381, 656, 754, 796, 1044, 1203
Hpy188III TCNNGA 6 cut(s) 523, 784, 1159, 1412, 1481, 1804
Hpy8I GTNNAC 8 cut(s) 70, 604, 705, 883, 1719, 1744, 1913, 2167
Hpy99I CGWCG 9 cut(s) 145, 154, 166, 232, 343, 349, 418, 430, 433
HpyAV CCTTC 8 cut(s) 1546, 1577, 1591, 1729, 1814, 1852, 1858, 1991
HpyCH4III ACNGT 5 cut(s) 387, 433, 509, 856, 1148
HpyCH4IV ACGT 2 cut(s) 407, 1416
HpyCH4V TGCA 9 cut(s) 979, 1258, 1447, 1649, 1964, 1988, 2039, 2093, 2147
HpyF10VI GCNNNNNNNGC 9 cut(s) 120, 175, 186, 271, 320, 442, 1255, 1643, 1787
HpyF3I CTNAG 3 cut(s) 441, 726, 1313
HpySE526I ACGT 2 cut(s) 407, 1416
Hsp92I GRCGYC 4 cut(s) 140, 161, 341, 1721
Hsp92II CATG 6 cut(s) 1408, 1477, 1807, 1988, 1998, 2065
HspAI GCGC 7 cut(s) 114, 154, 178, 333, 578, 1322, 1845
KroI GCCGGC 1 cut(s) 682
KroNI GCCGGC 1 cut(s) 684
Kzo9I GATC 6 cut(s) 376, 1014, 1660, 1828, 1867, 2082
Lsp1109I GCAGC 5 cut(s) 98, 457, 1630, 1633, 2105
LweI GCATC 4 cut(s) 215, 486, 712, 2134
MabI ACCWGGT 1 cut(s) 669
MaeI CTAG 7 cut(s) 53, 876, 1064, 1089, 1346, 1952, 2162
MaeII ACGT 2 cut(s) 407, 1416
MaeIII GTNAC 4 cut(s) 421, 1135, 1148, 1947
MalI GATC 6 cut(s) 378, 1016, 1662, 1830, 1869, 2084
MbiI CCGCTC 1 cut(s) 260
MboI GATC 6 cut(s) 376, 1014, 1660, 1828, 1867, 2082
MboII GAAGA 7 cut(s) 526, 772, 854, 1633, 1691, 2077, 2147
MflI RGATCY 1 cut(s) 1867
MhlI GDGCHC 8 cut(s) 49, 60, 171, 305, 490, 645, 1330, 2049
MluI ACGCGT 1 cut(s) 411
MlyI GAGTC 5 cut(s) 433, 535, 617, 758, 1048
MmeI TCCRAC 4 cut(s) 144, 404, 699, 732
MroNI GCCGGC 1 cut(s) 682
MseI TTAA 9 cut(s) 666, 1059, 1098, 1458, 1538, 1617, 1677, 1944, 2021
MslI CAYNNNNRTG 2 cut(s) 1263, 1578
MspA1I CMGCKG 1 cut(s) 111
MspI CCGG 9 cut(s) 84, 292, 327, 465, 683, 694, 708, 886, 1759
Mva1269I GAATGC 3 cut(s) 820, 976, 1447
MvaI CCWGG 5 cut(s) 543, 638, 671, 1184, 1217
MvnI CGCG 7 cut(s) 154, 180, 413, 1160, 1322, 1324, 1845
MwoI GCNNNNNNNGC 9 cut(s) 120, 175, 186, 271, 320, 442, 1255, 1643, 1787
NaeI GCCGGC 1 cut(s) 684
NciI CCSGG 7 cut(s) 85, 292, 328, 466, 694, 709, 1759
NdeII GATC 6 cut(s) 376, 1014, 1660, 1828, 1867, 2082
NgoMIV GCCGGC 1 cut(s) 682
NlaIII CATG 6 cut(s) 1408, 1477, 1807, 1988, 1998, 2065
NlaIV GGNNCC 3 cut(s) 47, 1588, 1869
NmeAIII GCCGAG 4 cut(s) 116, 290, 772, 955
NmuCI GTSAC 2 cut(s) 421, 1947
NruI TCGCGA 1 cut(s) 1160
PagI TCATGA 1 cut(s) 1803
PcsI WCGNNNNNNNCGW 3 cut(s) 158, 236, 422
PctI GAATGC 3 cut(s) 820, 976, 1447
PdiI GCCGGC 1 cut(s) 684
PfeI GAWTC 4 cut(s) 859, 1045, 1352, 1408
Pfl23II CGTACG 1 cut(s) 408
PflFI GACNNNGTC 1 cut(s) 343
PflMI CCANNNNNTGG 1 cut(s) 1508
PfoI TCCNGGA 2 cut(s) 326, 692
PleI GAGTC 5 cut(s) 433, 534, 616, 757, 1047
PpsI GAGTC 5 cut(s) 433, 534, 616, 757, 1047
PpuMI RGGWCCY 1 cut(s) 1586
PsiI TTATAA 1 cut(s) 1359
Psp124BI GAGCTC 2 cut(s) 305, 490
Psp5II RGGWCCY 1 cut(s) 1586
Psp6I CCWGG 5 cut(s) 541, 636, 669, 1182, 1215
PspFI CCCAGC 1 cut(s) 818
PspGI CCWGG 5 cut(s) 541, 636, 669, 1182, 1215
PspLI CGTACG 1 cut(s) 408
PspN4I GGNNCC 3 cut(s) 47, 1588, 1869
PspOMI GGGCCC 1 cut(s) 45
PspPI GGNCC 6 cut(s) 45, 46, 545, 1283, 1378, 1586
PspPPI RGGWCCY 1 cut(s) 1586
PsuI RGATCY 1 cut(s) 1867
PsyI GACNNNGTC 1 cut(s) 343
RruI TCGCGA 1 cut(s) 1160
RsaI GTAC 6 cut(s) 41, 350, 410, 884, 926, 1851
RsaNI GTAC 6 cut(s) 40, 349, 409, 883, 925, 1850
RseI CAYNNNNRTG 2 cut(s) 1263, 1578
SacI GAGCTC 2 cut(s) 305, 490
SaqAI TTAA 9 cut(s) 666, 1059, 1098, 1458, 1538, 1617, 1677, 1944, 2021
Sau3AI GATC 6 cut(s) 376, 1014, 1660, 1828, 1867, 2082
Sau96I GGNCC 6 cut(s) 45, 46, 545, 1283, 1378, 1586
SchI GAGTC 5 cut(s) 433, 535, 617, 758, 1048
SduI GDGCHC 8 cut(s) 49, 60, 171, 305, 490, 645, 1330, 2049
SexAI ACCWGGT 1 cut(s) 669
SfaNI GCATC 4 cut(s) 215, 486, 712, 2134
SinI GGWCC 3 cut(s) 1283, 1378, 1586
SmiMI CAYNNNNRTG 2 cut(s) 1263, 1578
SmlI CTYRAG 3 cut(s) 521, 1479, 2050
SmoI CTYRAG 3 cut(s) 521, 1479, 2050
SpeI ACTAGT 2 cut(s) 875, 1088
SspMI CTAG 7 cut(s) 53, 876, 1064, 1089, 1346, 1952, 2162
SstI GAGCTC 2 cut(s) 305, 490
StyI CCWWGG 1 cut(s) 93
TaaI ACNGT 5 cut(s) 387, 433, 509, 856, 1148
TaiI ACGT 2 cut(s) 410, 1419
TaqI TCGA 9 cut(s) 143, 239, 375, 570, 632, 713, 1120, 1659, 1769
TaqII GACCGA 1 cut(s) 610
TatI WGTACW 1 cut(s) 1849
TfiI GAWTC 4 cut(s) 859, 1045, 1352, 1408
Tru1I TTAA 9 cut(s) 666, 1059, 1098, 1458, 1538, 1617, 1677, 1944, 2021
Tru9I TTAA 9 cut(s) 666, 1059, 1098, 1458, 1538, 1617, 1677, 1944, 2021
TscAI CASTG 5 cut(s) 514, 1055, 1293, 1509, 1942
TseFI GTSAC 2 cut(s) 421, 1947
TseI GCWGC 5 cut(s) 111, 445, 1643, 1646, 2093
Tsp45I GTSAC 2 cut(s) 421, 1947
TspGWI ACGGA 1 cut(s) 216
TspRI CASTG 5 cut(s) 514, 1055, 1293, 1509, 1942
Tth111I GACNNNGTC 1 cut(s) 343
Van91I CCANNNNNTGG 1 cut(s) 1508
VpaK11BI GGWCC 3 cut(s) 1283, 1378, 1586
XapI RAATTY 2 cut(s) 1030, 1940
XmiI GTMKAC 2 cut(s) 603, 1912
XspI CTAG 7 cut(s) 53, 876, 1064, 1089, 1346, 1952, 2162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.