Rh1CG378800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0001384
Physical Location & Seq
Forward (+)
64728967 .. 64733589
4623 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG378800.1

Sequence Viewer

Length: 2382 bp
ATGGCCTCCACGAACTCAAACCCATCCGACCCACCTCTCTCGCCGGACGACCTCGCCGCCCGAGCTCTGAACAAACGCTACGAGGGTCTCGTCACCGTTCGAACCAAGGCCATAAAGGGCAAAGGGGCTTGGTACTGGACTCATTTAGAGCCCGTCATGGTTCGCAACCCAAACACCAACGTCCCCAAAGCTGTGAAGCTCAAGTGTCTTCTCTGCGACGCCGTTTTCTCGGCCTCGAACCCCTCCAGAACCGCCTCCGAGCACCTCAAGCGCGGCACGTGTCCGAATTTCACCTCCGTGTTGAGACCCAACTCGTCGGCGTCGCTGTCGCCGCAGCCCATATCGTCTCTGCCGTCGCCGTCTTCCCACAATCACAGAAAACGAAGCTCGCAAATGGGTACTCTTCTCCCTCCTCTTTCTCAAGCTCCTCCCACCTCTGCTTCGATTCAAGTACATTCTTTGGCTATGATTGAGTCGTCTCCCGGCTTTTGCGGCGGAGAGCTTGGTTATTCGCAGGGTCCGAACCCGAACCCGAACCCGAATCCTGTCGGGTTGAGTCAGCAGCACCACCATTTGGTGTTGTCGGGTGGGAAAGACGATTTGGGTGCTTTGGCAATGTTGGAAAATAGTGTCAAAAAGCTTAAAAGCCCCAAGCCTTCTTCTGCTAATGTCTCACTCACTAAGGAGCAGGTTGATTCTGCACTTGACTTGTTGTCTGAGTGGTTCTATGAGTCTTGTGGGTCTGTCTCGTTTTCGAGCCTCGAGCATCCCAAGTTCAAGGCCTTTCTCGGCCAGGTGGGCTTGCCTGCTGTGTTGCGGCGTGAGCTTTCGGGTCCTCGGCTTGATGCTAAGTTTGCTGAGGCTAAAGCCGAGTCTGAGGCTAGGATAAGGGATGCAATGTTTTTTCAAGTGGCTTCAGATGGTTGGGAATGTAATAATTTTTGCGGTGGGGAGGAGAGTATGGTTAAGTTTATGGTTAATCTTCCGAATGGGAGCAGTGTTTTTCAGAAGGCTGTGTTTACTGGAGGGTCAGTTTCGTCGAAATATGCTGAGGAGGTAATGTGGGATGCGGTTAGTGGGGTGTGTGGGAATGCTGTGCAGCGTTGCGTGGGGATTGTTGCTGACAAGTATAAAGCCAAGGCATTGAGGAACTTGGAGAGTCAGAATCATTGGATGGTGAATGTCTCCTGTCAGCTACAGGGGTTTGTTTCTTTGATCAAGGATTTTAACAAAGAGCATAAGTTGTTTATGGTTGTTACTGATAATTGCGTGAAGGTTGCAAATTTTGTAAACACCACCACCGAGGTTAGGCGGATTTTTCAGAAGTACAAGATGCAGGAGCTTGGCTATGCTGGGCTGCTCCAAGTTTCTTCTTCCAAATGCGATAATTCAAAAAACTATGCGCCTGTTTATGCAATGCTGGAGGATATGTTGACCTGTTCCCGCATACTCCAAATGGTTGTCTTGGATGATTGCTATAAGGTGGCATGTGTGGAGGATCCAAGTGCTAGGGAAGTTGCAGCGCTGATTCAAAGTGAAGGATTCTGGAATGAACTAGAGGCAGTTTATTCACTTATGAAGCTGATAAGAGGGATGGCTCAGGAGATTGAAGCTGAGAGGCCATTAATTGGGCAATGCCTGCCTCTTTGGGAAGAGTTGCGAACAAAAGTAAAGGATTGGTGTGCCAAGTTTAACATTGATGAAGGACCTGTTGAGAAAATAGTTGAAAAACGCTTCGCAAAGAATTACCACCCAGCATGGTCGGCTGCATTCATACTTGATCCACAATACCTGATGAAGGATGCTAGTGGAAAGTACCTTCCACCATTCAAGTTCTTGACGCACGAGCAGGAGAAGGATGTAGATAAGCTCATTACCAGATTGGTATCCAGGGAAGAAGCGCATGTTGCATTAATGGAACTCATGAAATGGAGGACAGAAGGAATGGACCCACTTTATGCTCAGGCAGTTCAAGTTAAACAGCAAGATCCTGTTACTGGAAAAATGAAAATTGCAAACCCGCAGAGCAGTAGACTTGTGTGGGAAACTTGTCTAAGCAAGTTAAACATACTGGGGAAGGTTGCAGTGAGACTTATCTTCCTCCATGCAACCTCATTTGGATTCAAGTGTAATTGGTCTTTCATGAAATGGATTTGTGTACATAGGCACTCAAGGATAGGCCTGGAAAGGGCAGAGAAGATGATATTCATTGCAGCTCATGCAAAGCTTGAAAGAAGGGATCTCTCTAACGACGAAGAAAGGGAAGCAGAGCTGTTTGCGACTGCGAGTGTTGATGAGGACATGCTGAATGAGGTCCTTTCCGATGCACCCACAGTACTAGGGTTGCTTGAATCGGTTGGGTGGATGGCAAACCAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

793

Amino Acids

88.1

Weight (kDa)

8.11

Isoelectric Point (pI)

44.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7963 PF25908 16 - 98 2.6e-45 Domain of unknown function (DUF7963)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 679
AccB7I CCANNNNNTGG 2 cut(s) 574, 1628
AccI GTMKAC 1 cut(s) 2032
AccII CGCG 1 cut(s) 273
AclWI GGATC 5 cut(s) 1493, 1506, 1775, 1982, 2247
AcoI YGGCCR 1 cut(s) 790
AcsI RAATTY 2 cut(s) 286, 1282
AcuI CTGAAG 1 cut(s) 900
AcvI CACGTG 1 cut(s) 279
AcyI GRCGYC 2 cut(s) 219, 320
AfaI GTAC 7 cut(s) 134, 400, 453, 1328, 1817, 2160, 2337
AfeI AGCGCT 1 cut(s) 1524
AfiI CCNNNNNNNGG 6 cut(s) 574, 1308, 1628, 1798, 1997, 2188
AflIII ACRYGT 1 cut(s) 278
AhdI GACNNNNNGTC 1 cut(s) 712
AjnI CCWGG 4 cut(s) 792, 1889, 2181, 2373
AjuI GAANNNNNNNTTGG 2 cut(s) 584, 616
AleI CACNNNNGTG 1 cut(s) 296
Alw21I GWGCWC 2 cut(s) 67, 264
Alw26I GTCTC 8 cut(s) 92, 298, 351, 483, 676, 751, 1189, 2083
AlwI GGATC 5 cut(s) 1493, 1506, 1775, 1982, 2247
Ama87I CYCGRG 2 cut(s) 60, 761
Aor51HI AGCGCT 1 cut(s) 1524
AoxI GGCC 7 cut(s) 3, 108, 231, 780, 790, 1619, 2179
ApeKI GCWGC 7 cut(s) 334, 562, 1099, 1357, 1520, 1766, 2213
ApoI RAATTY 2 cut(s) 286, 1282
AseI ATTAAT 2 cut(s) 1625, 1913
AspLEI GCGC 4 cut(s) 273, 1405, 1525, 1903
AspS9I GGNCC 5 cut(s) 518, 833, 1706, 1948, 2314
AsuC2I CCSGG 1 cut(s) 483
AsuHPI GGTGA 3 cut(s) 85, 283, 1189
AsuII TTCGAA 1 cut(s) 100
AvaI CYCGRG 2 cut(s) 60, 761
AvaII GGWCC 5 cut(s) 518, 833, 1706, 1948, 2314
BamHI GGATCC 1 cut(s) 1498
BanII GRGCYC 2 cut(s) 67, 153
BauI CACGAG 1 cut(s) 1844
BbrPI CACGTG 1 cut(s) 279
BbsI GAAGAC 2 cut(s) 200, 354
Bbv12I GWGCWC 2 cut(s) 67, 264
BbvCI CCTCAGC 2 cut(s) 858, 1050
BbvI GCAGC 7 cut(s) 346, 574, 1111, 1344, 1532, 1753, 2225
BccI CCATC 5 cut(s) 31, 914, 1168, 1588, 2359
BceAI ACGGC 3 cut(s) 206, 337, 343
BcgI CGANNNNNNTGC 2 cut(s) 587, 621
BciT130I CCWGG 4 cut(s) 794, 1891, 2183, 2375
BciVI GTATCC 1 cut(s) 1897
BclI TGATCA 1 cut(s) 1215
BcnI CCSGG 1 cut(s) 483
BcoDI GTCTC 8 cut(s) 92, 298, 351, 483, 676, 751, 1189, 2083
BfaI CTAG 5 cut(s) 882, 1509, 1556, 1806, 2339
BfmI CTRYAG 1 cut(s) 1196
BfoI RGCGCY 1 cut(s) 1526
BfuAI ACCTGC 1 cut(s) 679
BfuI GTATCC 1 cut(s) 1897
BglI GCCNNNNNGGC 1 cut(s) 798
BmcAI AGTACT 1 cut(s) 2337
Bme1390I CCNGG 5 cut(s) 483, 794, 1891, 2183, 2375
Bme18I GGWCC 5 cut(s) 518, 833, 1706, 1948, 2314
BmeRI GACNNNNNGTC 1 cut(s) 712
BmeT110I CYCGRG 2 cut(s) 60, 761
BmgT120I GGNCC 5 cut(s) 518, 833, 1706, 1948, 2314
BmiI GGNNCC 4 cut(s) 519, 834, 1500, 1950
BmrFI CCNGG 5 cut(s) 483, 794, 1891, 2183, 2375
BmrI ACTGGG 1 cut(s) 2081
BmsI GCATC 7 cut(s) 775, 835, 883, 1057, 1323, 1792, 2314
BmuI ACTGGG 1 cut(s) 2081
BpiI GAAGAC 2 cut(s) 200, 354
BpmI CTGGAG 3 cut(s) 229, 1044, 1442
Bpu10I CCTNAGC 4 cut(s) 858, 1050, 1599, 1962
Bpu14I TTCGAA 1 cut(s) 100
BpuEI CTTGAG 4 cut(s) 185, 251, 405, 2155
BpuMI CCSGG 1 cut(s) 483
BsaAI YACGTR 1 cut(s) 279
BsaBI GATNNNNATC 1 cut(s) 1885
BsaHI GRCGYC 2 cut(s) 219, 320
BsaI GGTCTC 2 cut(s) 92, 298
BsaJI CCNNGG 5 cut(s) 105, 836, 1137, 1302, 1890
BsaXI ACNNNNNCTCC 6 cut(s) 1017, 1046, 1047, 1076, 1415, 1445
Bsc4I CCNNNNNNNGG 6 cut(s) 574, 1308, 1628, 1798, 1997, 2188
Bse1I ACTGG 4 cut(s) 140, 1027, 2002, 2076
Bse3DI GCAATG 5 cut(s) 621, 903, 1422, 1640, 2208
Bse8I GATNNNNATC 1 cut(s) 1885
BseBI CCWGG 4 cut(s) 794, 1891, 2183, 2375
BseDI CCNNGG 5 cut(s) 105, 836, 1137, 1302, 1890
BseJI GATNNNNATC 1 cut(s) 1885
BseLI CCNNNNNNNGG 6 cut(s) 574, 1308, 1628, 1798, 1997, 2188
BseMI GCAATG 5 cut(s) 621, 903, 1422, 1640, 2208
BseMII CTCAG 7 cut(s) 708, 849, 867, 1041, 1605, 1613, 1976
BseNI ACTGG 4 cut(s) 140, 1027, 2002, 2076
BseRI GAGGAG 4 cut(s) 402, 417, 968, 1067
BseXI GCAGC 7 cut(s) 346, 574, 1111, 1344, 1532, 1753, 2225
BseYI CCCAGC 2 cut(s) 1352, 1753
BsgI GTGCAG 2 cut(s) 684, 1118
Bsh1236I CGCG 1 cut(s) 273
BshFI GGCC 7 cut(s) 5, 110, 233, 782, 792, 1621, 2181
BsiHKAI GWGCWC 2 cut(s) 67, 264
BsiHKCI CYCGRG 2 cut(s) 60, 761
BsiSI CCGG 2 cut(s) 44, 483
BslFI GGGAC 1 cut(s) 167
BslI CCNNNNNNNGG 6 cut(s) 574, 1308, 1628, 1798, 1997, 2188
BsmAI GTCTC 8 cut(s) 92, 298, 351, 483, 676, 751, 1189, 2083
BsmBI CGTCTC 2 cut(s) 351, 483
BsmFI GGGAC 1 cut(s) 167
BsmI GAATGC 2 cut(s) 1096, 1769
BsnI GGCC 7 cut(s) 5, 110, 233, 782, 792, 1621, 2181
Bso31I GGTCTC 2 cut(s) 92, 298
BsoBI CYCGRG 2 cut(s) 60, 761
Bsp119I TTCGAA 1 cut(s) 100
Bsp1286I GDGCHC 3 cut(s) 67, 153, 264
Bsp1407I TGTACA 1 cut(s) 2158
Bsp143I GATC 5 cut(s) 1215, 1498, 1780, 1987, 2239
BspANI GGCC 7 cut(s) 5, 110, 233, 782, 792, 1621, 2181
BspCNI CTCAG 7 cut(s) 709, 850, 868, 1042, 1606, 1612, 1975
BspFNI CGCG 1 cut(s) 273
BspHI TCATGA 2 cut(s) 1923, 2142
BspLI GGNNCC 4 cut(s) 519, 834, 1500, 1950
BspMI ACCTGC 1 cut(s) 679
BspPI GGATC 5 cut(s) 1493, 1506, 1775, 1982, 2247
BspT104I TTCGAA 1 cut(s) 100
BspTNI GGTCTC 2 cut(s) 92, 298
BsrDI GCAATG 5 cut(s) 621, 903, 1422, 1640, 2208
BsrGI TGTACA 1 cut(s) 2158
BsrI ACTGG 4 cut(s) 140, 1027, 2002, 2076
BssECI CCNNGG 5 cut(s) 105, 836, 1137, 1302, 1890
BssMI GATC 5 cut(s) 1215, 1498, 1780, 1987, 2239
BssNI GRCGYC 2 cut(s) 219, 320
BssSI CACGAG 1 cut(s) 1844
BssT1I CCWWGG 2 cut(s) 105, 1137
Bst2BI CACGAG 1 cut(s) 1844
Bst2UI CCWGG 4 cut(s) 794, 1891, 2183, 2375
Bst4CI ACNGT 2 cut(s) 97, 2335
Bst6I CTCTTC 2 cut(s) 408, 1647
BstACI GRCGYC 2 cut(s) 219, 320
BstAPI GCANNNNNTGC 2 cut(s) 1639, 2219
BstAUI TGTACA 1 cut(s) 2158
BstBAI YACGTR 1 cut(s) 279
BstBI TTCGAA 1 cut(s) 100
BstC8I GCNNGC 4 cut(s) 389, 803, 807, 1640
BstENI CCTNNNNNAGG 1 cut(s) 1796
BstFNI CGCG 1 cut(s) 273
BstH2I RGCGCY 1 cut(s) 1526
BstHHI GCGC 4 cut(s) 273, 1405, 1525, 1903
BstKTI GATC 5 cut(s) 1218, 1501, 1783, 1990, 2242
BstMAI GTCTC 8 cut(s) 92, 298, 351, 483, 676, 751, 1189, 2083
BstMBI GATC 5 cut(s) 1215, 1498, 1780, 1987, 2239
BstNI CCWGG 4 cut(s) 794, 1891, 2183, 2375
BstNSI RCATGY 3 cut(s) 1491, 1907, 2305
BstSCI CCNGG 5 cut(s) 481, 792, 1889, 2181, 2373
BstSFI CTRYAG 1 cut(s) 1196
BstUI CGCG 1 cut(s) 273
BstV1I GCAGC 7 cut(s) 346, 574, 1111, 1344, 1532, 1753, 2225
BstV2I GAAGAC 2 cut(s) 200, 354
BstX2I RGATCY 3 cut(s) 1498, 1987, 2239
BstYI RGATCY 3 cut(s) 1498, 1987, 2239
BsuI GTATCC 1 cut(s) 1897
BsuRI GGCC 7 cut(s) 5, 110, 233, 782, 792, 1621, 2181
BtsI GCAGTG 2 cut(s) 1003, 2091
BtsIMutI CAGTG 2 cut(s) 1003, 2091
BveI ACCTGC 1 cut(s) 679
Cac8I GCNNGC 4 cut(s) 389, 803, 807, 1640
CciI TCATGA 2 cut(s) 1923, 2142
CfoI GCGC 4 cut(s) 273, 1405, 1525, 1903
Cfr13I GGNCC 5 cut(s) 518, 833, 1706, 1948, 2314
CseI GACGC 3 cut(s) 227, 309, 1849
Csp6I GTAC 7 cut(s) 133, 399, 452, 1327, 1816, 2159, 2336
CviAII CATG 9 cut(s) 157, 1488, 1758, 1904, 1924, 2105, 2143, 2219, 2302
CviQI GTAC 7 cut(s) 133, 399, 452, 1327, 1816, 2159, 2336
DpnI GATC 5 cut(s) 1217, 1500, 1782, 1989, 2241
DpnII GATC 5 cut(s) 1215, 1498, 1780, 1987, 2239
DriI GACNNNNNGTC 1 cut(s) 712
EaeI YGGCCR 1 cut(s) 790
Eam1104I CTCTTC 2 cut(s) 408, 1647
Eam1105I GACNNNNNGTC 1 cut(s) 712
EarI CTCTTC 2 cut(s) 408, 1647
EciI GGCGGA 2 cut(s) 510, 1327
Ecl136II GAGCTC 1 cut(s) 65
Eco130I CCWWGG 2 cut(s) 105, 1137
Eco147I AGGCCT 2 cut(s) 782, 2181
Eco24I GRGCYC 2 cut(s) 67, 153
Eco31I GGTCTC 2 cut(s) 92, 298
Eco47I GGWCC 5 cut(s) 518, 833, 1706, 1948, 2314
Eco47III AGCGCT 1 cut(s) 1524
Eco53kI GAGCTC 1 cut(s) 65
Eco57I CTGAAG 1 cut(s) 900
Eco72I CACGTG 1 cut(s) 279
Eco88I CYCGRG 2 cut(s) 60, 761
EcoICRI GAGCTC 1 cut(s) 65
EcoNI CCTNNNNNAGG 1 cut(s) 1796
EcoO109I RGGNCCY 3 cut(s) 833, 1706, 2314
EcoRII CCWGG 4 cut(s) 792, 1889, 2181, 2373
EcoT14I CCWWGG 2 cut(s) 105, 1137
EcoT38I GRGCYC 2 cut(s) 67, 153
ErhI CCWWGG 2 cut(s) 105, 1137
Esp3I CGTCTC 2 cut(s) 351, 483
FaeI CATG 9 cut(s) 160, 1491, 1761, 1907, 1927, 2108, 2146, 2222, 2305
FaqI GGGAC 1 cut(s) 167
FatI CATG 9 cut(s) 156, 1487, 1757, 1903, 1923, 2104, 2142, 2218, 2301
FauI CCCGC 2 cut(s) 1451, 2028
FbaI TGATCA 1 cut(s) 1215
FblI GTMKAC 1 cut(s) 2032
FriOI GRGCYC 2 cut(s) 67, 153
FspBI CTAG 5 cut(s) 882, 1509, 1556, 1806, 2339
GlaI GCGC 4 cut(s) 272, 1404, 1524, 1902
GsaI CCCAGC 2 cut(s) 1356, 1757
GsuI CTGGAG 3 cut(s) 229, 1044, 1442
HaeII RGCGCY 1 cut(s) 1526
HaeIII GGCC 7 cut(s) 5, 110, 233, 782, 792, 1621, 2181
HapII CCGG 2 cut(s) 44, 483
HgaI GACGC 3 cut(s) 227, 309, 1849
HhaI GCGC 4 cut(s) 273, 1405, 1525, 1903
Hin1I GRCGYC 2 cut(s) 219, 320
Hin1II CATG 9 cut(s) 160, 1491, 1761, 1907, 1927, 2108, 2146, 2222, 2305
Hin6I GCGC 4 cut(s) 271, 1403, 1523, 1901
HinP1I GCGC 4 cut(s) 271, 1403, 1523, 1901
HincII GTYRAC 1 cut(s) 1434
HindII GTYRAC 1 cut(s) 1434
HindIII AAGCTT 2 cut(s) 638, 2225
HpaII CCGG 2 cut(s) 44, 483
HphI GGTGA 3 cut(s) 85, 283, 1189
Hpy166II GTNNAC 5 cut(s) 1020, 1291, 1434, 2033, 2159
Hpy188III TCNNGA 6 cut(s) 246, 1546, 1601, 1837, 1924, 2143
Hpy8I GTNNAC 5 cut(s) 1020, 1291, 1434, 2033, 2159
Hpy99I CGWCG 6 cut(s) 221, 319, 325, 358, 1042, 2255
HpyCH4III ACNGT 2 cut(s) 97, 2335
HpyCH4IV ACGT 2 cut(s) 180, 278
HpySE526I ACGT 2 cut(s) 180, 278
Hsp92I GRCGYC 2 cut(s) 219, 320
Hsp92II CATG 9 cut(s) 160, 1491, 1761, 1907, 1927, 2108, 2146, 2222, 2305
HspAI GCGC 4 cut(s) 271, 1403, 1523, 1901
Ksp22I TGATCA 1 cut(s) 1215
Kzo9I GATC 5 cut(s) 1215, 1498, 1780, 1987, 2239
LmnI GCTCC 5 cut(s) 430, 685, 993, 1339, 1365
Lsp1109I GCAGC 7 cut(s) 346, 574, 1111, 1344, 1532, 1753, 2225
LweI GCATC 7 cut(s) 775, 835, 883, 1057, 1323, 1792, 2314
MaeI CTAG 5 cut(s) 882, 1509, 1556, 1806, 2339
MaeII ACGT 2 cut(s) 180, 278
MaeIII GTNAC 3 cut(s) 91, 1255, 1993
MalI GATC 5 cut(s) 1217, 1500, 1782, 1989, 2241
MboI GATC 5 cut(s) 1215, 1498, 1780, 1987, 2239
MflI RGATCY 3 cut(s) 1498, 1987, 2239
MhlI GDGCHC 3 cut(s) 67, 153, 264
MluCI AATT 9 cut(s) 286, 937, 1264, 1282, 1387, 1626, 1744, 2010, 2131
MlyI GAGTC 6 cut(s) 133, 482, 565, 740, 881, 1168
MmeI TCCRAC 2 cut(s) 51, 600
MseI TTAA 9 cut(s) 642, 966, 978, 1227, 1625, 1692, 1913, 1977, 2063
MslI CAYNNNNRTG 1 cut(s) 296
MspI CCGG 2 cut(s) 44, 483
MspR9I CCNGG 5 cut(s) 483, 794, 1891, 2183, 2375
Mva1269I GAATGC 2 cut(s) 1096, 1769
MvaI CCWGG 4 cut(s) 794, 1891, 2183, 2375
MvnI CGCG 1 cut(s) 273
NciI CCSGG 1 cut(s) 483
NdeII GATC 5 cut(s) 1215, 1498, 1780, 1987, 2239
NlaIII CATG 9 cut(s) 160, 1491, 1761, 1907, 1927, 2108, 2146, 2222, 2305
NlaIV GGNNCC 4 cut(s) 519, 834, 1500, 1950
NmeAIII GCCGAG 4 cut(s) 209, 768, 817, 895
NmuCI GTSAC 1 cut(s) 91
NspI RCATGY 3 cut(s) 1491, 1907, 2305
NspV TTCGAA 1 cut(s) 100
OliI CACNNNNGTG 1 cut(s) 296
PaeR7I CTCGAG 1 cut(s) 761
PagI TCATGA 2 cut(s) 1923, 2142
PceI AGGCCT 2 cut(s) 782, 2181
PcsI WCGNNNNNNNCGW 3 cut(s) 87, 350, 518
PctI GAATGC 2 cut(s) 1096, 1769
PfeI GAWTC 8 cut(s) 445, 541, 695, 1165, 1528, 1542, 2121, 2351
PflMI CCANNNNNTGG 2 cut(s) 574, 1628
PleI GAGTC 6 cut(s) 133, 481, 564, 739, 880, 1167
PmaCI CACGTG 1 cut(s) 279
PmlI CACGTG 1 cut(s) 279
PpsI GAGTC 6 cut(s) 133, 481, 564, 739, 880, 1167
Ppu21I YACGTR 1 cut(s) 279
PpuMI RGGWCCY 3 cut(s) 833, 1706, 2314
PshBI ATTAAT 2 cut(s) 1625, 1913
Psp124BI GAGCTC 1 cut(s) 67
Psp5II RGGWCCY 3 cut(s) 833, 1706, 2314
Psp6I CCWGG 4 cut(s) 792, 1889, 2181, 2373
PspCI CACGTG 1 cut(s) 279
PspFI CCCAGC 2 cut(s) 1352, 1753
PspGI CCWGG 4 cut(s) 792, 1889, 2181, 2373
PspN4I GGNNCC 4 cut(s) 519, 834, 1500, 1950
PspPI GGNCC 5 cut(s) 518, 833, 1706, 1948, 2314
PspPPI RGGWCCY 3 cut(s) 833, 1706, 2314
PspXI VCTCGAGB 1 cut(s) 761
PsrI GAACNNNNNNTAC 2 cut(s) 62, 94
PsuI RGATCY 3 cut(s) 1498, 1987, 2239
RsaI GTAC 7 cut(s) 134, 400, 453, 1328, 1817, 2160, 2337
RsaNI GTAC 7 cut(s) 133, 399, 452, 1327, 1816, 2159, 2336
RseI CAYNNNNRTG 1 cut(s) 296
SacI GAGCTC 1 cut(s) 67
SaqAI TTAA 9 cut(s) 642, 966, 978, 1227, 1625, 1692, 1913, 1977, 2063
Sau3AI GATC 5 cut(s) 1215, 1498, 1780, 1987, 2239
Sau96I GGNCC 5 cut(s) 518, 833, 1706, 1948, 2314
ScaI AGTACT 1 cut(s) 2337
SchI GAGTC 6 cut(s) 133, 482, 565, 740, 881, 1168
ScrFI CCNGG 5 cut(s) 483, 794, 1891, 2183, 2375
SduI GDGCHC 3 cut(s) 67, 153, 264
SfaNI GCATC 7 cut(s) 775, 835, 883, 1057, 1323, 1792, 2314
SfcI CTRYAG 1 cut(s) 1196
Sfr274I CTCGAG 1 cut(s) 761
SfuI TTCGAA 1 cut(s) 100
SinI GGWCC 5 cut(s) 518, 833, 1706, 1948, 2314
SlaI CTCGAG 1 cut(s) 761
SmiMI CAYNNNNRTG 1 cut(s) 296
SmlI CTYRAG 5 cut(s) 200, 266, 420, 761, 2170
SmoI CTYRAG 5 cut(s) 200, 266, 420, 761, 2170
Sse9I AATT 9 cut(s) 286, 937, 1264, 1282, 1387, 1626, 1744, 2010, 2131
SseBI AGGCCT 2 cut(s) 782, 2181
SspMI CTAG 5 cut(s) 882, 1509, 1556, 1806, 2339
SstI GAGCTC 1 cut(s) 67
StuI AGGCCT 2 cut(s) 782, 2181
StyD4I CCNGG 5 cut(s) 481, 792, 1889, 2181, 2373
StyI CCWWGG 2 cut(s) 105, 1137
TaaI ACNGT 2 cut(s) 97, 2335
TaiI ACGT 2 cut(s) 183, 281
TaqI TCGA 6 cut(s) 100, 236, 443, 755, 762, 1040
TasI AATT 9 cut(s) 286, 937, 1264, 1282, 1387, 1626, 1744, 2010, 2131
TatI WGTACW 4 cut(s) 451, 1326, 2158, 2335
TauI GCSGC 5 cut(s) 59, 276, 334, 495, 820
TfiI GAWTC 8 cut(s) 445, 541, 695, 1165, 1528, 1542, 2121, 2351
Tru1I TTAA 9 cut(s) 642, 966, 978, 1227, 1625, 1692, 1913, 1977, 2063
Tru9I TTAA 9 cut(s) 642, 966, 978, 1227, 1625, 1692, 1913, 1977, 2063
TscAI CASTG 2 cut(s) 1003, 2091
TseFI GTSAC 1 cut(s) 91
TseI GCWGC 7 cut(s) 334, 562, 1099, 1357, 1520, 1766, 2213
Tsp45I GTSAC 1 cut(s) 91
TspGWI ACGGA 1 cut(s) 286
TspRI CASTG 2 cut(s) 1003, 2091
Van91I CCANNNNNTGG 2 cut(s) 574, 1628
VpaK11BI GGWCC 5 cut(s) 518, 833, 1706, 1948, 2314
VspI ATTAAT 2 cut(s) 1625, 1913
XagI CCTNNNNNAGG 1 cut(s) 1796
XapI RAATTY 2 cut(s) 286, 1282
XceI RCATGY 3 cut(s) 1491, 1907, 2305
XhoI CTCGAG 1 cut(s) 761
XmiI GTMKAC 1 cut(s) 2032
XspI CTAG 5 cut(s) 882, 1509, 1556, 1806, 2339
ZrmI AGTACT 1 cut(s) 2337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.