Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001384

Physical Location & Seq

Genomic Coordinates Reverse (-)

4738201 .. 4743896

Gene Structure 5696 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0062500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGATTGTGGCTGAAAATCTCCATTCAAGCACTGAACAGAACTTGATATTGGAAACACTTCAAATGACTCGTTTAGCTAATGGGGAGGCGGAGATAAGTCATCACAAATCGAACAATGAAGTCTTCGGCAAAGATGCATCGACAGATGATGTGAATGGAAACACGCTGCCTGATGTTTCAAGTAAAAAGGCAGGACAGCAAAAGGAAATGACTTTCCAAGATGTGTACAACCAAGACCTCGATGACGAGGATGATGACAGTGATTGGGAGCCCCTGCAAAAGAATGTTGAACTTGTAAAGTGGTTCTGCACCAACTGCACAATGGTCAACCTTGGGGATGTCAATTGCGATATATGTGGGGAACATAGAGAATCTGGAATTCTTAGGCATGGGTTTTTGGCATCTCCCCTGTTACCGGATTCAGGCCTAACTGAGATTGATTCTGACATTAGAGAAAGACACAAAGGGTCACAAGATTCAGCGTCTAACAGTTCTACTGCTGTGGGTTTTGATGAGAGAATGTTGCTACATTCAGAAATTCAATTGACGTCGCATCCACACCCAGAAAGACCTGACCGTATTCGAGCTATTGCTGCTAGCCTTGCTACAGCTGGTATCTTTCCAGGACGATGTTATCCAATTCCCGCTAGAGAAATCACGCGTGAAGAACTTCAGATGGTCCATTCTTTGGAGCATGTTGAAGCTGTTGATCTTACAGGCCATATGTTTTCTAGTTATTTCACCCCTGACACATATGCCAATGAACATTCAGCACGCGCTGCTAGGCTTGCAGCAGGTTTATGTGCTGATCTTGCTTCAGCAATTGTTTCTGGACGTACAAAAAATGGTTTTGCTCTGGTTCGTCCTCCTGGTCATCATGCTGGTATAAAGCAGGCTATGGGGTTTTGCCTCCACAATAATGCAGCAGTTGCTGCATTAGCAGCTCAAGTTTCTGGGGCTAAGAAAGTGCTAATTGTTGATTGGGATGTTCATCATGGGAATGGCACCCAGGAAATATTTGAACAGAACAAATCGGTCCTGTATATATCCTTACATAGACATGAGGGGGGAAAGTTCTATCCTGGTACTGGAGCCGCTGATGAGGTTGGTACTATGGGAGCTGAAGGATACTGTGTGAATGTTCCATGGAGTCGTGGTGGAGTGGGTGATAATGACTATGTTTTTGCATTTCAGCATGTTGTGCTTCCTATAGCTTCTGCATTTGCTCCCGATTTCACCATCATATCAGCAGGATTTGATGCAGCGAGGGGTGATCCTCTAGGATGCTGTGATGTTACTCCTGCCGGCTATGCAAAGATGACTGACATGTTGACTGACTTGTGTGGAGGGAAGTTGTTAGTCATTCTTGAGGGCGGGTACAATCTACGTTCAATATCATCTTCTGCTACTTCAGTAATTAAGGTTTTACTAGGTGAAAGTCCAGGATGTGAATTGGACAACACTTCACCTTCCAGATCTGGACTGCAAACTGTTCTAGAGGTCCTTAAAATTCAAAGTAACTACTGGCCTGTTTTGGCATCCAACTTTATGAAATTGCAGTCACAAGCGAGAATGCACTCTATTGAAAACAAAAGAAAACAAATAGAAAAGAAACGGAGGGCTGTGACTCCAATGTGGTGGAAATGGGGACGGAAGGGTCTACTGTATCATTTTTTAAATGGGCAAAATCGGCATGCCTATGTGAAGCGAAAGGGTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000254 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016125 GO:0016126 GO:0016491 GO:0016705 GO:0016709 GO:0030258 GO:0031984 GO:0034440 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0080064 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00100 ko01100 ko01110 map00100 map01100 map01110

Pfam Domains

Protein Families

FA_hydroxylase

Protein Analysis

573

Amino Acids

62.73

Weight (kDa)

5.94

Isoelectric Point (pI)

38.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hist_deacetyl	PF00850	187 - 476	7e-93	Histone deacetylase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001384)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12380 AT1G62870
fragaria_vesca	FvH4_5g00791 FvH4_5g00791 FvH4_5g00791 FvH4_5g00791 FvH4_5g00791 FvH4_5g00791 FvH4_5g00791 FvH4_5g00791 FvH4_5g00791 FvH4_7g28141
malus_domestica	MD01G1185300.v1.1 MD04G1078600.v1.1 MD07G1257500.v1.1
prunus_persica	Prupe.2G281700_v2.0.a1 Prupe.2G281700_v2.0.a1 Prupe.2G281700_v2.0.a1 Prupe.2G281700_v2.0.a1 Prupe.5G080400_v2.0.a1 Prupe.5G080400_v2.0.a1 Prupe.5G080400_v2.0.a1
pyrus_communis	pycom01g19690 pycom04g07040 pycom06g05190 pycom07g23050
rosa_chinensis	RchiOBHm_Chr1g0375071 RchiOBHm_Chr7g0201331
rosa_laevigata	RLG00000003680 RLG00000026690
rosa_multiflora	Rmu_sc0003776.1_g000009 Rmu_sc0012376.1_g000005
rosa_roxburghii	Rroxscaffold_3G00255360 Rroxscaffold_4G00283040 Rroxscaffold_7G00158650
rosa_rugosa	Rorug01G0387900 Rorug01G0388000 Rorug01G0388100 Rorug02G0295300 Rorug07G0062500 Rorug07G0062500 Rorug07G0062600
rosa_samantha	Rh1AG398600 Rh1BG365900 Rh1CG378800 Rh1DG396600 Rh3DG331000 Rh7AG189900 Rh7BG192400 Rh7CG200700 Rh7DG194800
rosa_wichuraiana	Rw1G035390 Rw7G016670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1656
AatII	GACGTC	1 cut(s)	551
Acc36I	ACCTGC	1 cut(s)	785
AccB1I	GGYRCC	1 cut(s)	1004
AccB7I	CCANNNNNTGG	1 cut(s)	688
AccI	GTMKAC	1 cut(s)	1660
AccII	CGCG	2 cut(s)	661, 777
AciI	CCGC	4 cut(s)	89, 645, 1095, 1374
AclWI	GGATC	1 cut(s)	1268
AcsI	RAATTY	3 cut(s)	378, 537, 1509
AcuI	CTGAAG	4 cut(s)	656, 801, 1143, 1395
AcyI	GRCGYC	1 cut(s)	548
AfaI	GTAC	5 cut(s)	227, 838, 1087, 1111, 1379
AfiI	CCNNNNNNNGG	4 cut(s)	415, 422, 688, 1088
AflIII	ACRYGT	2 cut(s)	659, 1326
AjnI	CCWGG	5 cut(s)	622, 868, 1008, 1081, 1441
AjuI	GAANNNNNNNTTGG	2 cut(s)	32, 64
AluBI	AGCT	7 cut(s)	77, 587, 611, 704, 944, 1121, 1214
AluI	AGCT	7 cut(s)	77, 587, 611, 704, 944, 1121, 1214
AlwI	GGATC	1 cut(s)	1268
AlwNI	CAGNNNCTG	1 cut(s)	932
AoxI	GGCC	3 cut(s)	424, 718, 1526
ApeKI	GCWGC	8 cut(s)	166, 593, 779, 791, 923, 932, 941, 1262
ApoI	RAATTY	3 cut(s)	378, 537, 1509
ArsI	GACNNNNNNTTYG	2 cut(s)	1166, 1198
Asp700I	GAANNNNTTC	2 cut(s)	57, 669
AspLEI	GCGC	1 cut(s)	779
AspS9I	GGNCC	3 cut(s)	679, 1036, 1501
AsuHPI	GGTGA	6 cut(s)	733, 1178, 1228, 1283, 1445, 1458
AsuNHI	GCTAGC	1 cut(s)	596
AvaII	GGWCC	3 cut(s)	679, 1036, 1501
BanI	GGYRCC	1 cut(s)	1004
BanII	GRGCYC	1 cut(s)	273
BbsI	GAAGAC	1 cut(s)	115
BbvI	GCAGC	8 cut(s)	153, 580, 766, 803, 919, 935, 953, 1274
BccI	CCATC	2 cut(s)	670, 1247
BciT130I	CCWGG	5 cut(s)	624, 870, 1010, 1083, 1443
BciVI	GTATCC	1 cut(s)	1121
BfaI	CTAG	7 cut(s)	597, 648, 732, 783, 1280, 1430, 1496
BfmI	CTRYAG	2 cut(s)	606, 1209
BfuAI	ACCTGC	1 cut(s)	785
BfuI	GTATCC	1 cut(s)	1121
BglII	AGATCT	1 cut(s)	1475
BisI	GCNGC	9 cut(s)	167, 594, 780, 792, 924, 933, 942, 1095, 1263
BlsI	GCNGC	9 cut(s)	168, 595, 781, 793, 925, 934, 943, 1096, 1264
Bme1390I	CCNGG	5 cut(s)	624, 870, 1010, 1083, 1443
Bme18I	GGWCC	3 cut(s)	679, 1036, 1501
BmgT120I	GGNCC	3 cut(s)	679, 1036, 1501
BmiI	GGNNCC	3 cut(s)	270, 1006, 1093
BmrFI	CCNGG	5 cut(s)	624, 870, 1010, 1083, 1443
BmsI	GCATC	7 cut(s)	124, 146, 410, 562, 1249, 1274, 1547
BmtI	GCTAGC	1 cut(s)	600
BpiI	GAAGAC	1 cut(s)	115
BpmI	CTGGAG	1 cut(s)	1110
BpuEI	CTTGAG	2 cut(s)	930, 1388
BsaBI	GATNNNNATC	1 cut(s)	990
BsaHI	GRCGYC	1 cut(s)	548
BsaJI	CCNNGG	3 cut(s)	331, 1008, 1145
BsaWI	WCCGGW	1 cut(s)	415
BsaXI	ACNNNNNCTCC	2 cut(s)	1141, 1171
Bsc4I	CCNNNNNNNGG	4 cut(s)	415, 422, 688, 1088
Bse118I	RCCGGY	1 cut(s)	1304
Bse1I	ACTGG	2 cut(s)	1093, 1529
Bse8I	GATNNNNATC	1 cut(s)	990
BseBI	CCWGG	5 cut(s)	624, 870, 1010, 1083, 1443
BseDI	CCNNGG	3 cut(s)	331, 1008, 1145
BseGI	GGATG	7 cut(s)	256, 343, 553, 991, 1289, 1451, 1538
BseJI	GATNNNNATC	1 cut(s)	990
BseLI	CCNNNNNNNGG	4 cut(s)	415, 422, 688, 1088
BseMII	CTCAG	1 cut(s)	423
BseNI	ACTGG	2 cut(s)	1093, 1529
BseXI	GCAGC	8 cut(s)	153, 580, 766, 803, 919, 935, 953, 1274
BsgI	GTGCAG	2 cut(s)	292, 301
Bsh1236I	CGCG	2 cut(s)	661, 777
BshFI	GGCC	3 cut(s)	426, 720, 1528
BshNI	GGYRCC	1 cut(s)	1004
BsiSI	CCGG	2 cut(s)	416, 1305
BslFI	GGGAC	1 cut(s)	1662
BslI	CCNNNNNNNGG	4 cut(s)	415, 422, 688, 1088
BsmFI	GGGAC	1 cut(s)	1662
BsmI	GAATGC	1 cut(s)	1578
BsnI	GGCC	3 cut(s)	426, 720, 1528
Bsp1286I	GDGCHC	1 cut(s)	273
Bsp1407I	TGTACA	1 cut(s)	225
Bsp143I	GATC	4 cut(s)	709, 808, 1273, 1475
Bsp19I	CCATGG	1 cut(s)	1145
BspACI	CCGC	4 cut(s)	89, 645, 1095, 1374
BspANI	GGCC	3 cut(s)	426, 720, 1528
BspCNI	CTCAG	1 cut(s)	424
BspFNI	CGCG	2 cut(s)	661, 777
BspLI	GGNNCC	3 cut(s)	270, 1006, 1093
BspMI	ACCTGC	1 cut(s)	785
BspOI	GCTAGC	1 cut(s)	600
BspPI	GGATC	1 cut(s)	1268
BspT107I	GGYRCC	1 cut(s)	1004
BsrFI	RCCGGY	1 cut(s)	1304
BsrGI	TGTACA	1 cut(s)	225
BsrI	ACTGG	2 cut(s)	1093, 1529
BssAI	RCCGGY	1 cut(s)	1304
BssECI	CCNNGG	3 cut(s)	331, 1008, 1145
BssMI	GATC	4 cut(s)	709, 808, 1273, 1475
BssNI	GRCGYC	1 cut(s)	548
BssT1I	CCWWGG	2 cut(s)	331, 1145
Bst2UI	CCWGG	5 cut(s)	624, 870, 1010, 1083, 1443
Bst4CI	ACNGT	6 cut(s)	260, 491, 578, 1133, 1492, 1665
BstACI	GRCGYC	1 cut(s)	548
BstAPI	GCANNNNNTGC	5 cut(s)	315, 779, 929, 932, 1201
BstAUI	TGTACA	1 cut(s)	225
BstC8I	GCNNGC	6 cut(s)	598, 775, 789, 894, 1306, 1695
BstDEI	CTNAG	3 cut(s)	383, 432, 960
BstDSI	CCRYGG	1 cut(s)	1145
BstF5I	GGATG	7 cut(s)	256, 343, 553, 991, 1289, 1451, 1538
BstFNI	CGCG	2 cut(s)	661, 777
BstHHI	GCGC	1 cut(s)	779
BstKTI	GATC	4 cut(s)	712, 811, 1276, 1478
BstMBI	GATC	4 cut(s)	709, 808, 1273, 1475
BstNI	CCWGG	5 cut(s)	624, 870, 1010, 1083, 1443
BstNSI	RCATGY	4 cut(s)	698, 1199, 1330, 1697
BstSCI	CCNGG	5 cut(s)	622, 868, 1008, 1081, 1441
BstSFI	CTRYAG	2 cut(s)	606, 1209
BstUI	CGCG	2 cut(s)	661, 777
BstV1I	GCAGC	8 cut(s)	153, 580, 766, 803, 919, 935, 953, 1274
BstV2I	GAAGAC	1 cut(s)	115
BstX2I	RGATCY	1 cut(s)	1475
BstXI	CCANNNNNNTGG	1 cut(s)	1638
BstYI	RGATCY	1 cut(s)	1475
BsuI	GTATCC	1 cut(s)	1121
BsuRI	GGCC	3 cut(s)	426, 720, 1528
BtgI	CCRYGG	1 cut(s)	1145
BtsCI	GGATG	7 cut(s)	256, 343, 553, 991, 1289, 1451, 1538
BtsIMutI	CAGTG	2 cut(s)	30, 265
BveI	ACCTGC	1 cut(s)	785
Cac8I	GCNNGC	6 cut(s)	598, 775, 789, 894, 1306, 1695
CaiI	CAGNNNCTG	1 cut(s)	932
CfoI	GCGC	1 cut(s)	779
Cfr10I	RCCGGY	1 cut(s)	1304
Cfr13I	GGNCC	3 cut(s)	679, 1036, 1501
CseI	GACGC	1 cut(s)	471
Csp6I	GTAC	5 cut(s)	226, 837, 1086, 1110, 1378
CviAII	CATG	9 cut(s)	389, 695, 878, 995, 1061, 1146, 1196, 1327, 1694
CviQI	GTAC	5 cut(s)	226, 837, 1086, 1110, 1378
DdeI	CTNAG	3 cut(s)	383, 432, 960
DpnI	GATC	4 cut(s)	711, 810, 1275, 1477
DpnII	GATC	4 cut(s)	709, 808, 1273, 1475
DraI	TTTAAA	1 cut(s)	1677
DrdI	GACNNNNNNGTC	1 cut(s)	1656
DseDI	GACNNNNNNGTC	1 cut(s)	1656
EciI	GGCGGA	1 cut(s)	104
Eco130I	CCWWGG	2 cut(s)	331, 1145
Eco147I	AGGCCT	1 cut(s)	426
Eco24I	GRGCYC	1 cut(s)	273
Eco47I	GGWCC	3 cut(s)	679, 1036, 1501
Eco57I	CTGAAG	4 cut(s)	656, 801, 1143, 1395
EcoO109I	RGGNCCY	1 cut(s)	1501
EcoRI	GAATTC	1 cut(s)	378
EcoRII	CCWGG	5 cut(s)	622, 868, 1008, 1081, 1441
EcoT14I	CCWWGG	2 cut(s)	331, 1145
EcoT22I	ATGCAT	1 cut(s)	139
EcoT38I	GRGCYC	1 cut(s)	273
ErhI	CCWWGG	2 cut(s)	331, 1145
FaeI	CATG	9 cut(s)	392, 698, 881, 998, 1064, 1149, 1199, 1330, 1697
FaqI	GGGAC	1 cut(s)	1662
FatI	CATG	9 cut(s)	388, 694, 877, 994, 1060, 1145, 1195, 1326, 1693
FauI	CCCGC	2 cut(s)	652, 1367
FauNDI	CATATG	2 cut(s)	723, 754
FblI	GTMKAC	1 cut(s)	1660
Fnu4HI	GCNGC	9 cut(s)	167, 594, 780, 792, 924, 933, 942, 1095, 1263
FokI	GGATG	7 cut(s)	263, 350, 540, 998, 1296, 1458, 1525
FriOI	GRGCYC	1 cut(s)	273
Fsp4HI	GCNGC	9 cut(s)	167, 594, 780, 792, 924, 933, 942, 1095, 1263
FspBI	CTAG	7 cut(s)	597, 648, 732, 783, 1280, 1430, 1496
GlaI	GCGC	1 cut(s)	778
GluI	GCNGC	9 cut(s)	167, 594, 780, 792, 924, 933, 942, 1095, 1263
GsuI	CTGGAG	1 cut(s)	1110
HaeIII	GGCC	3 cut(s)	426, 720, 1528
HapII	CCGG	2 cut(s)	416, 1305
HgaI	GACGC	1 cut(s)	471
HhaI	GCGC	1 cut(s)	779
Hin1I	GRCGYC	1 cut(s)	548
Hin1II	CATG	9 cut(s)	392, 698, 881, 998, 1064, 1149, 1199, 1330, 1697
Hin6I	GCGC	1 cut(s)	777
HinP1I	GCGC	1 cut(s)	777
HincII	GTYRAC	2 cut(s)	328, 1332
HindII	GTYRAC	2 cut(s)	328, 1332
HinfI	GANTC	7 cut(s)	67, 371, 419, 440, 476, 1150, 1627
HpaII	CCGG	2 cut(s)	416, 1305
HphI	GGTGA	6 cut(s)	733, 1178, 1228, 1283, 1445, 1458
Hpy166II	GTNNAC	4 cut(s)	226, 328, 1332, 1661
Hpy188I	TCNGA	3 cut(s)	445, 535, 675
Hpy188III	TCNNGA	7 cut(s)	375, 831, 1229, 1367, 1473, 1479, 1496
Hpy8I	GTNNAC	4 cut(s)	226, 328, 1332, 1661
Hpy99I	CGWCG	1 cut(s)	553
HpyAV	CCTTC	3 cut(s)	1118, 1479, 1648
HpyCH4III	ACNGT	6 cut(s)	260, 491, 578, 1133, 1492, 1665
HpyCH4IV	ACGT	3 cut(s)	548, 835, 1387
HpyF3I	CTNAG	3 cut(s)	383, 432, 960
HpySE526I	ACGT	3 cut(s)	548, 835, 1387
Hsp92I	GRCGYC	1 cut(s)	548
Hsp92II	CATG	9 cut(s)	392, 698, 881, 998, 1064, 1149, 1199, 1330, 1697
HspAI	GCGC	1 cut(s)	777
KroI	GCCGGC	1 cut(s)	1304
KroNI	GCCGGC	1 cut(s)	1306
Kzo9I	GATC	4 cut(s)	709, 808, 1273, 1475
LmnI	GCTCC	5 cut(s)	268, 691, 1091, 1118, 1231
Lsp1109I	GCAGC	8 cut(s)	153, 580, 766, 803, 919, 935, 953, 1274
LweI	GCATC	7 cut(s)	124, 146, 410, 562, 1249, 1274, 1547
MaeI	CTAG	7 cut(s)	597, 648, 732, 783, 1280, 1430, 1496
MaeII	ACGT	3 cut(s)	548, 835, 1387
MaeIII	GTNAC	6 cut(s)	411, 468, 1294, 1517, 1560, 1624
MalI	GATC	4 cut(s)	711, 810, 1275, 1477
MboI	GATC	4 cut(s)	709, 808, 1273, 1475
MboII	GAAGA	3 cut(s)	115, 677, 1392
MfeI	CAATTG	3 cut(s)	343, 542, 822
MflI	RGATCY	1 cut(s)	1475
MhlI	GDGCHC	1 cut(s)	273
MluI	ACGCGT	1 cut(s)	659
MlyI	GAGTC	3 cut(s)	61, 1159, 1621
MmeI	TCCRAC	1 cut(s)	1566
Mph1103I	ATGCAT	1 cut(s)	139
MroNI	GCCGGC	1 cut(s)	1304
MroXI	GAANNNNTTC	2 cut(s)	57, 669
MseI	TTAA	3 cut(s)	1419, 1506, 1676
MslI	CAYNNNNRTG	4 cut(s)	918, 999, 1059, 1698
MspA1I	CMGCKG	2 cut(s)	611, 1097
MspI	CCGG	2 cut(s)	416, 1305
MspR9I	CCNGG	5 cut(s)	624, 870, 1010, 1083, 1443
MunI	CAATTG	3 cut(s)	343, 542, 822
Mva1269I	GAATGC	1 cut(s)	1578
MvaI	CCWGG	5 cut(s)	624, 870, 1010, 1083, 1443
MvnI	CGCG	2 cut(s)	661, 777
NaeI	GCCGGC	1 cut(s)	1306
NcoI	CCATGG	1 cut(s)	1145
NdeI	CATATG	2 cut(s)	723, 754
NdeII	GATC	4 cut(s)	709, 808, 1273, 1475
NgoMIV	GCCGGC	1 cut(s)	1304
NheI	GCTAGC	1 cut(s)	596
NlaIII	CATG	9 cut(s)	392, 698, 881, 998, 1064, 1149, 1199, 1330, 1697
NlaIV	GGNNCC	3 cut(s)	270, 1006, 1093
NmuCI	GTSAC	3 cut(s)	468, 1560, 1624
NsiI	ATGCAT	1 cut(s)	139
NspI	RCATGY	4 cut(s)	698, 1199, 1330, 1697
PaeI	GCATGC	1 cut(s)	1697
PceI	AGGCCT	1 cut(s)	426
PciI	ACATGT	1 cut(s)	1326
PctI	GAATGC	1 cut(s)	1578
PdiI	GCCGGC	1 cut(s)	1306
PdmI	GAANNNNTTC	2 cut(s)	57, 669
PfeI	GAWTC	4 cut(s)	371, 419, 440, 476
PflMI	CCANNNNNTGG	1 cut(s)	688
PfoI	TCCNGGA	2 cut(s)	622, 1441
PkrI	GCNGC	9 cut(s)	168, 595, 781, 793, 925, 934, 943, 1096, 1264
PleI	GAGTC	3 cut(s)	61, 1158, 1621
PpsI	GAGTC	3 cut(s)	61, 1158, 1621
PpuMI	RGGWCCY	1 cut(s)	1501
PscI	ACATGT	1 cut(s)	1326
Psp5II	RGGWCCY	1 cut(s)	1501
Psp6I	CCWGG	5 cut(s)	622, 868, 1008, 1081, 1441
PspGI	CCWGG	5 cut(s)	622, 868, 1008, 1081, 1441
PspN4I	GGNNCC	3 cut(s)	270, 1006, 1093
PspPI	GGNCC	3 cut(s)	679, 1036, 1501
PspPPI	RGGWCCY	1 cut(s)	1501
PstNI	CAGNNNCTG	1 cut(s)	932
PsuI	RGATCY	1 cut(s)	1475
PvuII	CAGCTG	1 cut(s)	611
RsaI	GTAC	5 cut(s)	227, 838, 1087, 1111, 1379
RsaNI	GTAC	5 cut(s)	226, 837, 1086, 1110, 1378
RseI	CAYNNNNRTG	4 cut(s)	918, 999, 1059, 1698
SaqAI	TTAA	3 cut(s)	1419, 1506, 1676
SatI	GCNGC	9 cut(s)	167, 594, 780, 792, 924, 933, 942, 1095, 1263
Sau3AI	GATC	4 cut(s)	709, 808, 1273, 1475
Sau96I	GGNCC	3 cut(s)	679, 1036, 1501
SchI	GAGTC	3 cut(s)	61, 1159, 1621
ScrFI	CCNGG	5 cut(s)	624, 870, 1010, 1083, 1443
SduI	GDGCHC	1 cut(s)	273
SfaNI	GCATC	7 cut(s)	124, 146, 410, 562, 1249, 1274, 1547
SfcI	CTRYAG	2 cut(s)	606, 1209
SinI	GGWCC	3 cut(s)	679, 1036, 1501
SmiMI	CAYNNNNRTG	4 cut(s)	918, 999, 1059, 1698
SmlI	CTYRAG	2 cut(s)	945, 1367
SmoI	CTYRAG	2 cut(s)	945, 1367
SphI	GCATGC	1 cut(s)	1697
SseBI	AGGCCT	1 cut(s)	426
SsiI	CCGC	4 cut(s)	89, 645, 1095, 1374
SspI	AATATT	1 cut(s)	1017
SspMI	CTAG	7 cut(s)	597, 648, 732, 783, 1280, 1430, 1496
StuI	AGGCCT	1 cut(s)	426
StyD4I	CCNGG	5 cut(s)	622, 868, 1008, 1081, 1441
StyI	CCWWGG	2 cut(s)	331, 1145
TaaI	ACNGT	6 cut(s)	260, 491, 578, 1133, 1492, 1665
TaiI	ACGT	3 cut(s)	551, 838, 1390
TaqI	TCGA	4 cut(s)	110, 140, 240, 583
TaqII	GACCGA	1 cut(s)	1024
TatI	WGTACW	1 cut(s)	225
TauI	GCSGC	1 cut(s)	1097
TfiI	GAWTC	4 cut(s)	371, 419, 440, 476
Tru1I	TTAA	3 cut(s)	1419, 1506, 1676
Tru9I	TTAA	3 cut(s)	1419, 1506, 1676
TscAI	CASTG	2 cut(s)	37, 265
TseFI	GTSAC	3 cut(s)	468, 1560, 1624
TseI	GCWGC	8 cut(s)	166, 593, 779, 791, 923, 932, 941, 1262
Tsp45I	GTSAC	3 cut(s)	468, 1560, 1624
TspDTI	ATGAA	4 cut(s)	132, 777, 980, 1565
TspGWI	ACGGA	2 cut(s)	1630, 1666
TspRI	CASTG	2 cut(s)	37, 265
Van91I	CCANNNNNTGG	1 cut(s)	688
VpaK11BI	GGWCC	3 cut(s)	679, 1036, 1501
XapI	RAATTY	3 cut(s)	378, 537, 1509
XbaI	TCTAGA	1 cut(s)	1495
XceI	RCATGY	4 cut(s)	698, 1199, 1330, 1697
XcmI	CCANNNNNNNNNTGG	1 cut(s)	319
XmiI	GTMKAC	1 cut(s)	1660
XmnI	GAANNNNTTC	2 cut(s)	57, 669
XspI	CTAG	7 cut(s)	597, 648, 732, 783, 1280, 1430, 1496
ZraI	GACGTC	1 cut(s)	549
Zsp2I	ATGCAT	1 cut(s)	139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.