Rroxscaffold_3G00255360

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0001384
Physical Location & Seq
Reverse (-)
49582985 .. 49588211
5227 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00255360.1

Sequence Viewer

Length: 2343 bp
ATGGCGGCTACTAACACCACCACGCAGACGGTGGCCGTGGGGATGGAACTCACGGTGGACACGTCGTCGGCGTCGCCGGACGACGCGGCGGCCAAGGCCGTGACGAAACGCTACGAGGGGCTGGTGATGGTGAGGACCAAGGCCATAAAGGGCAAAGGGGCTTGGTATTGGGCCCACCTAGAGCCCATTCTGGTTCACAACACCGACACCGGGCTACCCAAGGCCGTGAAGCTCCGGTGCGCTCTCTGCGAGGCCATTTTCTCGGCGTCGAACCCGTCGCGCACGGCGTCGGAGCACCTAAAGCGCGGGACTTGCCCCAATTTCAGCTCCGCATCCAAACCCATTTCGTCTCCGTCGCCAATATCGACTTCTTTGCCCAACTCCGCTCCGCCGCCGCCGTCCCACCACAACCCCCGGAAGCGGAGCTCCTCCTCAGCGGCGGCCTCCGGGAGCGGCCCGACGCCGTCGTACAGCGTTCCGCCGCAGGGTATAGTCGATCCGGTCCGGTTCTGCGGCGGCGAGCTGACGTACGCGTCGGCGGTGACGACGACGGTGCTGACTCAGCAGCCGCATTTGATGTTGTCCGGTGGGAAAGACGATTTGGGAGCTCTGGCGATGCTGGAGGACAGTGTGAAGAAGCTCAAGAGTCCCAAAACCTCACCTGGCCCAACGCTGTGTAAGAGCCAAGTCGATTGTGCGCTTGATTTTCTTGCTGATTGGGTCTACGAGTCTTGTGGGTCGGTCGCATTTTCGAGCCTGGAGCACCCCAAGTTCCGAGCTTTTCTTAACCAGGTGGGCTTGCCGGCGATTTCCCGGAGGGAGTTCACCGGGTCGAGGTTGGATGCTAAGTTTGAGGAAGCAAAGGCCGAGTCGGAAGCCAGAATTAGAGACGCTATGTTCTTCCAGATTGCCTCTGATGGATGGAAGTCCAAGAATGCTGGGGGTTTAGGTGAGGATAGTCTTGTCAATTTGACTGTGAATCTTCCCAATGGGACTAGTGTGTACCGGAGGGCGGTGTTTGTTGGCGGCTCTGTGCCGTGGAAGTACGCCGAGGAGGTTCTGTGGGAGACGATTACGAGCATTTGTGGGAATGCTGTGCAACAATGTGTAGGAATAGTAGCGGACAGGTTTAGGATCAAGGCATTGAGGAATTTAGAGAGTCAGAATCACTGGATGGTTAATCTATCTTGTCAGTTTCAGGGTTTTACTAGTTTGATTAAGGATTTCAGTAAGGAGCTTCGGTTGTTTAGGGCTGTTACTGAAAACTGTTACAAGCTCGCGAGTTTTGTGAATAACAAGTCTCAGGTTAGGAGTAGCTTTCAGAGGTATCAGTCCCAGGCGGGTGGTTATGCTGGTTTATTACGAGTGCCATCGATGCTCGATTATGAAGCGCTCAACTTTGGTCCAGTGTATGTAATGGTTGAGGATATTCTTAGCTCCACGCGAGCACTGCAGTTGGTCGTGCTAGATGAATCTTATAAAGGGGTATCAATGGAGGACCCAACGGCAAGAGAAGTTGCTGAGATGATTGGGGACGTGGCGTTTTGGAATGAATTGGAGGCGGTGCATTCTTTGGTTAAACTTATCAAGGACATGGCTCAAGAGATTGAGATAGAGAGGCCACTGGTTGGGAAATGCCTCCCACTTTGGGATGAATTAAGAGCAAAAGTGAAGGATTGGTGTTCAAGTTTCCACATTGATGAAGGTCCCGTGGAGAAGGTACTCGAAAAGCGGTTCAAGAAGAATTACCATCCAGCTTGGGCTGCTGCATTTATACTCGATCCAGTTTATTTGATTAAGGACATAAGTGGAAAGTATCTTCCACCATTCAAATTGTTGACGCCAGAGCAAGAGAAGGATGTGGACAAGCTCATAACCCGGCTTGTATCAAGGGAGGAGGCTCACATTGCACTAATGGAACTCATGAAGTGGAGAACAGAAGGGCTTGATCCCGTATATGCTCGCGCTGTACAAATGAAGGAGAAGGATCCCGTTTCAGGCAAGATGAGAATTGCTAACCCACAAAGCAGTAGACTTGTGTGGGAAACATACCTCACTGAATTTAAGTCACTAGGGAAAGTTGCAGTTAGGCTCATTTTCCTTCATTCAACTTCATGTGGGTTCAAATCCAGTTGGTCTTTAATGAGGTGGGTGTCTGCAAATGGGCACTCAAGGGTGAGCATGGACAAGGCACAGAAGTTGATCTTCATTGCAGCTCATTCCAAGCTTGAAAGACGGGATTTTTCCTGTGATGAAGATAAGGATGCAGAGCTACTTGCCCTAGTAAACGGTGAGGATGATGTGTTAAATGAGGGTTTGACTGACTGCAACACTTGCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659

Protein Analysis

780

Amino Acids

86.2

Weight (kDa)

8.0

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7963 PF25908 26 - 109 7.2e-47 Domain of unknown function (DUF7963)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1479
AasI GACNNNNNNGTC 1 cut(s) 532
AccB7I CCANNNNNTGG 1 cut(s) 1628
AccBSI CCGCTC 2 cut(s) 386, 453
AccI GTMKAC 2 cut(s) 723, 2032
AccII CGCG 7 cut(s) 86, 280, 306, 533, 1280, 1444, 1965
AclWI GGATC 6 cut(s) 491, 1142, 1775, 1943, 1982, 1995
AcoI YGGCCR 2 cut(s) 33, 90
AcsI RAATTY 2 cut(s) 1150, 2060
AcyI GRCGYC 5 cut(s) 71, 266, 287, 461, 1841
AfaI GTAC 6 cut(s) 470, 530, 1004, 1046, 1722, 1971
AfeI AGCGCT 1 cut(s) 1392
AfiI CCNNNNNNNGG 8 cut(s) 210, 420, 485, 834, 1012, 1628, 1648, 1997
AflIII ACRYGT 2 cut(s) 60, 531
AgsI TTSAA 6 cut(s) 1686, 1738, 1831, 2109, 2125, 2231
AhdI GACNNNNNGTC 1 cut(s) 64
AhlI ACTAGT 2 cut(s) 995, 1208
AjiI CACGTC 2 cut(s) 63, 1537
AjnI CCWGG 4 cut(s) 661, 756, 789, 1335
AjuI GAANNNNNNNTTGG 4 cut(s) 352, 384, 584, 616
Alw21I GWGCWC 5 cut(s) 297, 428, 610, 765, 1450
Alw26I GTCTC 4 cut(s) 354, 882, 1061, 1305
AlwI GGATC 6 cut(s) 491, 1142, 1775, 1943, 1982, 1995
Aor51HI AGCGCT 1 cut(s) 1392
ApaI GGGCCC 1 cut(s) 175
ApeKI GCWGC 4 cut(s) 565, 1763, 1766, 2213
ApoI RAATTY 2 cut(s) 1150, 2060
ArsI GACNNNNNNTTYG 2 cut(s) 854, 886
AspLEI GCGC 6 cut(s) 242, 282, 306, 700, 1393, 1967
AspS9I GGNCC 9 cut(s) 135, 171, 172, 455, 502, 665, 1403, 1498, 1706
AsuC2I CCSGG 6 cut(s) 211, 415, 448, 814, 829, 1879
AsuHPI GGTGA 8 cut(s) 136, 142, 553, 651, 817, 962, 2188, 2303
AvaII GGWCC 5 cut(s) 135, 502, 1403, 1498, 1706
BaeGI GKGCMC 2 cut(s) 175, 2169
BamHI GGATCC 1 cut(s) 1987
BanII GRGCYC 4 cut(s) 175, 186, 428, 610
Bbv12I GWGCWC 5 cut(s) 297, 428, 610, 765, 1450
BbvCI CCTCAGC 1 cut(s) 433
BbvI GCAGC 4 cut(s) 577, 1750, 1753, 2225
BccI CCATC 7 cut(s) 37, 121, 911, 915, 1168, 1378, 1758
BceAI ACGGC 8 cut(s) 20, 83, 209, 300, 382, 448, 1021, 1521
BcgI CGANNNNNNTGC 4 cut(s) 355, 389, 535, 569
BciT130I CCWGG 4 cut(s) 663, 758, 791, 1337
BcnI CCSGG 6 cut(s) 211, 415, 448, 814, 829, 1879
BcoDI GTCTC 4 cut(s) 354, 882, 1061, 1305
BcuI ACTAGT 2 cut(s) 995, 1208
BfaI CTAG 6 cut(s) 179, 996, 1209, 1466, 2072, 2282
BfmI CTRYAG 1 cut(s) 1451
BfoI RGCGCY 1 cut(s) 1394
Bme18I GGWCC 5 cut(s) 135, 502, 1403, 1498, 1706
BmeRI GACNNNNNGTC 1 cut(s) 64
BmgBI CACGTC 2 cut(s) 63, 1537
BmgT120I GGNCC 9 cut(s) 135, 171, 172, 455, 502, 665, 1403, 1498, 1706
BmiI GGNNCC 4 cut(s) 173, 1500, 1708, 1989
BmsI GCATC 5 cut(s) 341, 606, 832, 1365, 2254
BpmI CTGGAG 2 cut(s) 641, 779
Bpu10I CCTNAGC 1 cut(s) 433
BpuEI CTTGAG 3 cut(s) 626, 1584, 2155
BpuMI CCSGG 6 cut(s) 211, 415, 448, 814, 829, 1879
Bsa29I ATCGAT 1 cut(s) 1373
BsaHI GRCGYC 5 cut(s) 71, 266, 287, 461, 1841
BsaJI CCNNGG 9 cut(s) 36, 93, 138, 219, 413, 1037, 1050, 1335, 1710
BsaWI WCCGGW 5 cut(s) 234, 499, 504, 584, 1005
BsaXI ACNNNNNCTCC 4 cut(s) 1046, 1076, 1226, 1256
Bsc4I CCNNNNNNNGG 8 cut(s) 210, 420, 485, 834, 1012, 1628, 1648, 1997
Bse118I RCCGGY 1 cut(s) 802
Bse1I ACTGG 5 cut(s) 1175, 1406, 1629, 1784, 2130
Bse3DI GCAATG 2 cut(s) 1905, 2208
BseBI CCWGG 4 cut(s) 663, 758, 791, 1337
BseCI ATCGAT 1 cut(s) 1373
BseDI CCNNGG 9 cut(s) 36, 93, 138, 219, 413, 1037, 1050, 1335, 1710
BseLI CCNNNNNNNGG 8 cut(s) 210, 420, 485, 834, 1012, 1628, 1648, 1997
BseMI GCAATG 2 cut(s) 1905, 2208
BseMII CTCAG 4 cut(s) 447, 575, 1316, 1512
BseNI ACTGG 5 cut(s) 1175, 1406, 1629, 1784, 2130
BseRI GAGGAG 4 cut(s) 418, 421, 1067, 1910
BseSI GKGCMC 2 cut(s) 175, 2169
BseXI GCAGC 4 cut(s) 577, 1750, 1753, 2225
BseYI CCCAGC 1 cut(s) 938
Bsh1236I CGCG 7 cut(s) 86, 280, 306, 533, 1280, 1444, 1965
Bsh1285I CGRYCG 1 cut(s) 744
BshVI ATCGAT 1 cut(s) 1373
BsiEI CGRYCG 1 cut(s) 744
BsiHKAI GWGCWC 5 cut(s) 297, 428, 610, 765, 1450
BsiWI CGTACG 1 cut(s) 528
BslFI GGGAC 7 cut(s) 322, 385, 633, 1006, 1318, 1547, 1692
BslI CCNNNNNNNGG 8 cut(s) 210, 420, 485, 834, 1012, 1628, 1648, 1997
BsmAI GTCTC 4 cut(s) 354, 882, 1061, 1305
BsmBI CGTCTC 3 cut(s) 354, 882, 1061
BsmFI GGGAC 7 cut(s) 322, 385, 633, 1006, 1318, 1547, 1692
BsmI GAATGC 3 cut(s) 940, 1096, 1567
Bsp120I GGGCCC 1 cut(s) 171
Bsp1286I GDGCHC 8 cut(s) 175, 186, 297, 428, 610, 765, 1450, 2169
Bsp1407I TGTACA 1 cut(s) 1969
Bsp143I GATC 6 cut(s) 496, 1134, 1780, 1948, 1987, 2202
Bsp68I TCGCGA 1 cut(s) 1280
BspCNI CTCAG 4 cut(s) 446, 574, 1315, 1513
BspDI ATCGAT 1 cut(s) 1373
BspFNI CGCG 7 cut(s) 86, 280, 306, 533, 1280, 1444, 1965
BspHI TCATGA 1 cut(s) 1923
BspLI GGNNCC 4 cut(s) 173, 1500, 1708, 1989
BspMAI CTGCAG 1 cut(s) 1455
BspPI GGATC 6 cut(s) 491, 1142, 1775, 1943, 1982, 1995
BsrBI CCGCTC 2 cut(s) 386, 453
BsrDI GCAATG 2 cut(s) 1905, 2208
BsrFI RCCGGY 1 cut(s) 802
BsrGI TGTACA 1 cut(s) 1969
BsrI ACTGG 5 cut(s) 1175, 1406, 1629, 1784, 2130
BssAI RCCGGY 1 cut(s) 802
BssECI CCNNGG 9 cut(s) 36, 93, 138, 219, 413, 1037, 1050, 1335, 1710
BssMI GATC 6 cut(s) 496, 1134, 1780, 1948, 1987, 2202
BssNI GRCGYC 5 cut(s) 71, 266, 287, 461, 1841
BssT1I CCWWGG 3 cut(s) 93, 138, 219
Bst2UI CCWGG 4 cut(s) 663, 758, 791, 1337
Bst4CI ACNGT 7 cut(s) 31, 55, 553, 629, 976, 1268, 2291
BstACI GRCGYC 5 cut(s) 71, 266, 287, 461, 1841
BstAPI GCANNNNNTGC 1 cut(s) 2334
BstAUI TGTACA 1 cut(s) 1969
BstC8I GCNNGC 6 cut(s) 521, 800, 804, 1278, 1446, 1963
BstDEI CTNAG 6 cut(s) 433, 561, 846, 1302, 1433, 1521
BstDSI CCRYGG 3 cut(s) 36, 1037, 1710
BstFNI CGCG 7 cut(s) 86, 280, 306, 533, 1280, 1444, 1965
BstH2I RGCGCY 1 cut(s) 1394
BstHHI GCGC 6 cut(s) 242, 282, 306, 700, 1393, 1967
BstKTI GATC 6 cut(s) 499, 1137, 1783, 1951, 1990, 2205
BstMAI GTCTC 4 cut(s) 354, 882, 1061, 1305
BstMBI GATC 6 cut(s) 496, 1134, 1780, 1948, 1987, 2202
BstMCI CGRYCG 1 cut(s) 744
BstNI CCWGG 4 cut(s) 663, 758, 791, 1337
BstSFI CTRYAG 1 cut(s) 1451
BstSLI GKGCMC 2 cut(s) 175, 2169
BstUI CGCG 7 cut(s) 86, 280, 306, 533, 1280, 1444, 1965
BstV1I GCAGC 4 cut(s) 577, 1750, 1753, 2225
BstX2I RGATCY 1 cut(s) 1987
BstXI CCANNNNNNTGG 1 cut(s) 1343
BstYI RGATCY 1 cut(s) 1987
Bsu15I ATCGAT 1 cut(s) 1373
BsuTUI ATCGAT 1 cut(s) 1373
BtgI CCRYGG 3 cut(s) 36, 1037, 1710
BtgZI GCGATG 1 cut(s) 629
BtrI CACGTC 2 cut(s) 63, 1537
BtsI GCAGTG 1 cut(s) 1448
BtsIMutI CAGTG 6 cut(s) 634, 1168, 1413, 1448, 1622, 2055
BtuMI TCGCGA 1 cut(s) 1280
Cac8I GCNNGC 6 cut(s) 521, 800, 804, 1278, 1446, 1963
CciI TCATGA 1 cut(s) 1923
CfoI GCGC 6 cut(s) 242, 282, 306, 700, 1393, 1967
Cfr10I RCCGGY 1 cut(s) 802
Cfr13I GGNCC 9 cut(s) 135, 171, 172, 455, 502, 665, 1403, 1498, 1706
ClaI ATCGAT 1 cut(s) 1373
CpoI CGGWCCG 1 cut(s) 502
CseI GACGC 8 cut(s) 60, 92, 255, 276, 469, 522, 899, 1849
CsiI ACCWGGT 1 cut(s) 789
Csp6I GTAC 6 cut(s) 469, 529, 1003, 1045, 1721, 1970
CspI CGGWCCG 1 cut(s) 502
CviAII CATG 4 cut(s) 1594, 1924, 2115, 2182
CviQI GTAC 6 cut(s) 469, 529, 1003, 1045, 1721, 1970
DdeI CTNAG 6 cut(s) 433, 561, 846, 1302, 1433, 1521
DpnI GATC 6 cut(s) 498, 1136, 1782, 1950, 1989, 2204
DpnII GATC 6 cut(s) 496, 1134, 1780, 1948, 1987, 2202
DrdI GACNNNNNNGTC 1 cut(s) 532
DriI GACNNNNNGTC 1 cut(s) 64
DseDI GACNNNNNNGTC 1 cut(s) 532
EaeI YGGCCR 2 cut(s) 33, 90
Eam1105I GACNNNNNGTC 1 cut(s) 64
EciI GGCGGA 2 cut(s) 378, 468
Ecl136II GAGCTC 2 cut(s) 426, 608
Eco130I CCWWGG 3 cut(s) 93, 138, 219
Eco24I GRGCYC 4 cut(s) 175, 186, 428, 610
Eco47I GGWCC 5 cut(s) 135, 502, 1403, 1498, 1706
Eco47III AGCGCT 1 cut(s) 1392
Eco53kI GAGCTC 2 cut(s) 426, 608
EcoICRI GAGCTC 2 cut(s) 426, 608
EcoO109I RGGNCCY 2 cut(s) 1498, 1706
EcoRII CCWGG 4 cut(s) 661, 756, 789, 1335
EcoT14I CCWWGG 3 cut(s) 93, 138, 219
EcoT38I GRGCYC 4 cut(s) 175, 186, 428, 610
ErhI CCWWGG 3 cut(s) 93, 138, 219
Esp3I CGTCTC 3 cut(s) 354, 882, 1061
FaeI CATG 4 cut(s) 1597, 1927, 2118, 2185
FalI AAGNNNNNCTT 2 cut(s) 2189, 2221
FaqI GGGAC 7 cut(s) 322, 385, 633, 1006, 1318, 1547, 1692
FatI CATG 4 cut(s) 1593, 1923, 2114, 2181
FauI CCCGC 2 cut(s) 299, 1333
FblI GTMKAC 2 cut(s) 723, 2032
FriOI GRGCYC 4 cut(s) 175, 186, 428, 610
FspBI CTAG 6 cut(s) 179, 996, 1209, 1466, 2072, 2282
GlaI GCGC 6 cut(s) 241, 281, 305, 699, 1392, 1966
GsaI CCCAGC 1 cut(s) 942
GsuI CTGGAG 2 cut(s) 641, 779
HaeII RGCGCY 1 cut(s) 1394
HgaI GACGC 8 cut(s) 60, 92, 255, 276, 469, 522, 899, 1849
HhaI GCGC 6 cut(s) 242, 282, 306, 700, 1393, 1967
Hin1I GRCGYC 5 cut(s) 71, 266, 287, 461, 1841
Hin1II CATG 4 cut(s) 1597, 1927, 2118, 2185
Hin6I GCGC 6 cut(s) 240, 280, 304, 698, 1391, 1965
HinP1I GCGC 6 cut(s) 240, 280, 304, 698, 1391, 1965
HincII GTYRAC 1 cut(s) 1839
HindII GTYRAC 1 cut(s) 1839
HindIII AAGCTT 1 cut(s) 2225
HinfI GANTC 8 cut(s) 559, 646, 728, 869, 979, 1159, 1165, 1472
HphI GGTGA 8 cut(s) 136, 142, 553, 651, 817, 962, 2188, 2303
Hpy166II GTNNAC 9 cut(s) 58, 196, 724, 825, 1003, 1839, 1864, 2033, 2287
Hpy188I TCNGA 6 cut(s) 292, 776, 874, 916, 1164, 1323
Hpy188III TCNNGA 6 cut(s) 643, 904, 1279, 1601, 1738, 1924
Hpy8I GTNNAC 9 cut(s) 58, 196, 724, 825, 1003, 1839, 1864, 2033, 2287
HpyAV CCTTC 8 cut(s) 1666, 1697, 1711, 1849, 1934, 1972, 1978, 2111
HpyCH4III ACNGT 7 cut(s) 31, 55, 553, 629, 976, 1268, 2291
HpyCH4IV ACGT 3 cut(s) 62, 527, 1536
HpyF3I CTNAG 6 cut(s) 433, 561, 846, 1302, 1433, 1521
HpySE526I ACGT 3 cut(s) 62, 527, 1536
Hsp92I GRCGYC 5 cut(s) 71, 266, 287, 461, 1841
Hsp92II CATG 4 cut(s) 1597, 1927, 2118, 2185
HspAI GCGC 6 cut(s) 240, 280, 304, 698, 1391, 1965
KroI GCCGGC 1 cut(s) 802
KroNI GCCGGC 1 cut(s) 804
Kzo9I GATC 6 cut(s) 496, 1134, 1780, 1948, 1987, 2202
Lsp1109I GCAGC 4 cut(s) 577, 1750, 1753, 2225
LweI GCATC 5 cut(s) 341, 606, 832, 1365, 2254
MabI ACCWGGT 1 cut(s) 789
MaeI CTAG 6 cut(s) 179, 996, 1209, 1466, 2072, 2282
MaeII ACGT 3 cut(s) 62, 527, 1536
MaeIII GTNAC 5 cut(s) 100, 541, 1255, 1268, 2067
MalI GATC 6 cut(s) 498, 1136, 1782, 1950, 1989, 2204
MbiI CCGCTC 2 cut(s) 386, 453
MboI GATC 6 cut(s) 496, 1134, 1780, 1948, 1987, 2202
MboII GAAGA 7 cut(s) 646, 892, 974, 1753, 1811, 2197, 2267
MflI RGATCY 1 cut(s) 1987
MhlI GDGCHC 8 cut(s) 175, 186, 297, 428, 610, 765, 1450, 2169
MluI ACGCGT 1 cut(s) 531
MlyI GAGTC 5 cut(s) 553, 655, 737, 878, 1168
MmeI TCCRAC 3 cut(s) 270, 819, 852
MroNI GCCGGC 1 cut(s) 802
MseI TTAA 9 cut(s) 786, 1179, 1218, 1578, 1658, 1797, 2064, 2141, 2306
MslI CAYNNNNRTG 1 cut(s) 1698
MspA1I CMGCKG 1 cut(s) 437
Mva1269I GAATGC 3 cut(s) 940, 1096, 1567
MvaI CCWGG 4 cut(s) 663, 758, 791, 1337
MvnI CGCG 7 cut(s) 86, 280, 306, 533, 1280, 1444, 1965
NaeI GCCGGC 1 cut(s) 804
NciI CCSGG 6 cut(s) 211, 415, 448, 814, 829, 1879
NdeII GATC 6 cut(s) 496, 1134, 1780, 1948, 1987, 2202
NgoMIV GCCGGC 1 cut(s) 802
NlaIII CATG 4 cut(s) 1597, 1927, 2118, 2185
NlaIV GGNNCC 4 cut(s) 173, 1500, 1708, 1989
NmeAIII GCCGAG 3 cut(s) 242, 892, 1075
NmuCI GTSAC 3 cut(s) 100, 541, 2067
NruI TCGCGA 1 cut(s) 1280
PagI TCATGA 1 cut(s) 1923
PcsI WCGNNNNNNNCGW 5 cut(s) 59, 68, 284, 362, 542
PctI GAATGC 3 cut(s) 940, 1096, 1567
PdiI GCCGGC 1 cut(s) 804
PfeI GAWTC 3 cut(s) 979, 1165, 1472
Pfl23II CGTACG 1 cut(s) 528
PflFI GACNNNGTC 1 cut(s) 463
PflMI CCANNNNNTGG 1 cut(s) 1628
PfoI TCCNGGA 2 cut(s) 446, 812
PleI GAGTC 5 cut(s) 553, 654, 736, 877, 1167
PpsI GAGTC 5 cut(s) 553, 654, 736, 877, 1167
PpuMI RGGWCCY 2 cut(s) 1498, 1706
PsiI TTATAA 1 cut(s) 1479
Psp124BI GAGCTC 2 cut(s) 428, 610
Psp5II RGGWCCY 2 cut(s) 1498, 1706
Psp6I CCWGG 4 cut(s) 661, 756, 789, 1335
PspFI CCCAGC 1 cut(s) 938
PspGI CCWGG 4 cut(s) 661, 756, 789, 1335
PspLI CGTACG 1 cut(s) 528
PspN4I GGNNCC 4 cut(s) 173, 1500, 1708, 1989
PspOMI GGGCCC 1 cut(s) 171
PspPI GGNCC 9 cut(s) 135, 171, 172, 455, 502, 665, 1403, 1498, 1706
PspPPI RGGWCCY 2 cut(s) 1498, 1706
PstI CTGCAG 1 cut(s) 1455
PsuI RGATCY 1 cut(s) 1987
PsyI GACNNNGTC 1 cut(s) 463
RruI TCGCGA 1 cut(s) 1280
RsaI GTAC 6 cut(s) 470, 530, 1004, 1046, 1722, 1971
RsaNI GTAC 6 cut(s) 469, 529, 1003, 1045, 1721, 1970
RseI CAYNNNNRTG 1 cut(s) 1698
Rsr2I CGGWCCG 1 cut(s) 502
RsrII CGGWCCG 1 cut(s) 502
SacI GAGCTC 2 cut(s) 428, 610
SaqAI TTAA 9 cut(s) 786, 1179, 1218, 1578, 1658, 1797, 2064, 2141, 2306
Sau3AI GATC 6 cut(s) 496, 1134, 1780, 1948, 1987, 2202
Sau96I GGNCC 9 cut(s) 135, 171, 172, 455, 502, 665, 1403, 1498, 1706
SchI GAGTC 5 cut(s) 553, 655, 737, 878, 1168
SduI GDGCHC 8 cut(s) 175, 186, 297, 428, 610, 765, 1450, 2169
SexAI ACCWGGT 1 cut(s) 789
SfaNI GCATC 5 cut(s) 341, 606, 832, 1365, 2254
SfcI CTRYAG 1 cut(s) 1451
SinI GGWCC 5 cut(s) 135, 502, 1403, 1498, 1706
SmiMI CAYNNNNRTG 1 cut(s) 1698
SmlI CTYRAG 3 cut(s) 641, 1599, 2170
SmoI CTYRAG 3 cut(s) 641, 1599, 2170
SpeI ACTAGT 2 cut(s) 995, 1208
SspMI CTAG 6 cut(s) 179, 996, 1209, 1466, 2072, 2282
SstI GAGCTC 2 cut(s) 428, 610
StyI CCWWGG 3 cut(s) 93, 138, 219
TaaI ACNGT 7 cut(s) 31, 55, 553, 629, 976, 1268, 2291
TaiI ACGT 3 cut(s) 65, 530, 1539
TaqII GACCGA 1 cut(s) 730
TatI WGTACW 1 cut(s) 1969
TfiI GAWTC 3 cut(s) 979, 1165, 1472
Tru1I TTAA 9 cut(s) 786, 1179, 1218, 1578, 1658, 1797, 2064, 2141, 2306
Tru9I TTAA 9 cut(s) 786, 1179, 1218, 1578, 1658, 1797, 2064, 2141, 2306
TscAI CASTG 6 cut(s) 634, 1175, 1413, 1455, 1629, 2062
TseFI GTSAC 3 cut(s) 100, 541, 2067
TseI GCWGC 4 cut(s) 565, 1763, 1766, 2213
Tsp45I GTSAC 3 cut(s) 100, 541, 2067
TspGWI ACGGA 1 cut(s) 342
TspRI CASTG 6 cut(s) 634, 1175, 1413, 1455, 1629, 2062
Tth111I GACNNNGTC 1 cut(s) 463
Van91I CCANNNNNTGG 1 cut(s) 1628
VpaK11BI GGWCC 5 cut(s) 135, 502, 1403, 1498, 1706
XapI RAATTY 2 cut(s) 1150, 2060
XcmI CCANNNNNNNNNTGG 1 cut(s) 28
XmiI GTMKAC 2 cut(s) 723, 2032
XspI CTAG 6 cut(s) 179, 996, 1209, 1466, 2072, 2282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.